BLASTX nr result
ID: Ephedra26_contig00012202
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00012202
(774 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR17840.1| unknown [Picea sitchensis] 224 3e-56
gb|ABR16646.1| unknown [Picea sitchensis] 224 3e-56
gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao] 197 3e-48
gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus pe... 197 4e-48
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-... 196 6e-48
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps... 196 6e-48
ref|XP_006307125.1| hypothetical protein CARUB_v10008711mg [Caps... 196 6e-48
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-... 195 1e-47
emb|CBI40014.3| unnamed protein product [Vitis vinifera] 195 1e-47
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-... 195 1e-47
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A... 195 2e-47
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-... 194 2e-47
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr... 194 3e-47
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-... 194 4e-47
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis] 193 5e-47
ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arab... 193 5e-47
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-... 193 6e-47
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-... 193 6e-47
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ... 193 6e-47
gb|AAB69385.1| sigma factor 2 [Arabidopsis thaliana] 193 6e-47
>gb|ABR17840.1| unknown [Picea sitchensis]
Length = 495
Score = 224 bits (570), Expect = 3e-56
Identities = 105/208 (50%), Positives = 153/208 (73%)
Frame = -2
Query: 638 KNQSNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRK 459
++ S+ RLLTA+EE+ SR +QDL KL++I+ +YK+K GKEPT+ QWAE +G+DQK+L+
Sbjct: 190 RDWSSSRLLTASEEVELSRGIQDLIKLDRIRAKYKEKTGKEPTLAQWAEVIGVDQKTLKM 249
Query: 458 RLEEGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRF 279
RLE G +S K+++CNLRLV+S+A YQN G+ LQDL+QAG +GL+R EKFD +RGF+F
Sbjct: 250 RLEVGRDSFDKIINCNLRLVISVAKNYQNRGLSLQDLIQAGSMGLMRSAEKFDYSRGFKF 309
Query: 278 STYAHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDIT 99
STYA+WWIRQ+I K LT QS+ + +P + VE+ +++R L ++H R PT +E++++
Sbjct: 310 STYAYWWIRQSITKALTEQSRTIRLPVHIVESMTRIRTAWRLLYQEHKRDPTKEEVAEVA 369
Query: 98 GFSKTRIKDVMSYRKTFVSLDSPAPGKD 15
G S TR++ V + SLD GKD
Sbjct: 370 GISMTRLRHVTRCSRVPTSLDR-CVGKD 396
>gb|ABR16646.1| unknown [Picea sitchensis]
Length = 592
Score = 224 bits (570), Expect = 3e-56
Identities = 105/208 (50%), Positives = 153/208 (73%)
Frame = -2
Query: 638 KNQSNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRK 459
++ S+ RLLTA+EE+ SR +QDL KL++I+ +YK+K GKEPT+ QWAE +G+DQK+L+
Sbjct: 287 RDWSSSRLLTASEEVELSRGIQDLIKLDRIRAKYKEKTGKEPTLAQWAEVIGVDQKTLKM 346
Query: 458 RLEEGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRF 279
RLE G +S K+++CNLRLV+S+A YQN G+ LQDL+QAG +GL+R EKFD +RGF+F
Sbjct: 347 RLEVGRDSFDKIINCNLRLVISVAKNYQNRGLSLQDLIQAGSMGLMRSAEKFDYSRGFKF 406
Query: 278 STYAHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDIT 99
STYA+WWIRQ+I K LT QS+ + +P + VE+ +++R L ++H R PT +E++++
Sbjct: 407 STYAYWWIRQSITKALTEQSRTIRLPVHIVESMTRIRTAWRLLYQEHKRDPTKEEVAEVA 466
Query: 98 GFSKTRIKDVMSYRKTFVSLDSPAPGKD 15
G S TR++ V + SLD GKD
Sbjct: 467 GISMTRLRHVTRCSRVPTSLDR-CVGKD 493
>gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
Length = 623
Score = 197 bits (502), Expect = 3e-48
Identities = 94/198 (47%), Positives = 135/198 (68%)
Frame = -2
Query: 629 SNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 450
S RLLTANEE+ S +QDL KLE+++++ ++ G +PT QWA A G+DQK+LR RL
Sbjct: 310 STSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLN 369
Query: 449 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTY 270
G + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD ++GF+FSTY
Sbjct: 370 YGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 429
Query: 269 AHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 90
AHWWI+QA+ K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ TG S
Sbjct: 430 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLS 489
Query: 89 KTRIKDVMSYRKTFVSLD 36
R+ V+ K SLD
Sbjct: 490 MKRLTAVLLTPKAPRSLD 507
>gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus persica]
Length = 401
Score = 197 bits (500), Expect = 4e-48
Identities = 96/195 (49%), Positives = 134/195 (68%)
Frame = -2
Query: 620 RLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 441
RLLTANEEI S +Q+L KLEK++++ + G +PTI QWA A G+DQK+LRKR+ G
Sbjct: 102 RLLTANEEIELSEGIQELLKLEKLQEELVQRCGGQPTIAQWAAAAGVDQKTLRKRINYGI 161
Query: 440 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTYAHW 261
+ KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD ++GF+FSTYAHW
Sbjct: 162 LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQQGCRGLVRGAEKFDASKGFKFSTYAHW 221
Query: 260 WIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFSKTR 81
WI+QA+ K+L+ QS+ + +P + VEA ++R+ K + R P +E+++ TG S R
Sbjct: 222 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLSMKR 281
Query: 80 IKDVMSYRKTFVSLD 36
+ V+ K SL+
Sbjct: 282 LAAVLLTPKAPRSLE 296
>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
Length = 564
Score = 196 bits (499), Expect = 6e-48
Identities = 95/198 (47%), Positives = 133/198 (67%)
Frame = -2
Query: 629 SNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 450
S RLLT EEI S +QDL KLEKI++ ++ G +PT QWA G+DQK+LRKRL
Sbjct: 262 SASRLLTPTEEIKLSAGIQDLLKLEKIQEDLAERFGSQPTFAQWAAVAGVDQKTLRKRLN 321
Query: 449 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTY 270
G + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLV+G EKFDGT+GF+FSTY
Sbjct: 322 YGIFCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQEGCRGLVKGAEKFDGTKGFKFSTY 381
Query: 269 AHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 90
AHWWI+QA+ K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ TG S
Sbjct: 382 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDDEEVAEATGLS 441
Query: 89 KTRIKDVMSYRKTFVSLD 36
R+ V+ K SL+
Sbjct: 442 MKRLNAVLMTPKAPRSLE 459
>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
gi|482575837|gb|EOA40024.1| hypothetical protein
CARUB_v10008711mg [Capsella rubella]
Length = 571
Score = 196 bits (499), Expect = 6e-48
Identities = 93/198 (46%), Positives = 136/198 (68%)
Frame = -2
Query: 629 SNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 450
S+ +LLT EE S +QDL KLE+++ + ++ G++PT +QWA A G+DQKSLRKR+
Sbjct: 267 SSSKLLTVREEHELSAGIQDLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRIN 326
Query: 449 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTY 270
G + + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD T+GF+FSTY
Sbjct: 327 YGTQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTY 386
Query: 269 AHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 90
AHWWI+QA+ K+L+ QS+++ +P + VEA ++++ + + R P +E+++ TG S
Sbjct: 387 AHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYTEKGRHPENEEVAEATGLS 446
Query: 89 KTRIKDVMSYRKTFVSLD 36
R+ V+ K SLD
Sbjct: 447 MKRLMAVLLSPKPPRSLD 464
>ref|XP_006307125.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
gi|482575836|gb|EOA40023.1| hypothetical protein
CARUB_v10008711mg [Capsella rubella]
Length = 487
Score = 196 bits (499), Expect = 6e-48
Identities = 93/198 (46%), Positives = 136/198 (68%)
Frame = -2
Query: 629 SNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 450
S+ +LLT EE S +QDL KLE+++ + ++ G++PT +QWA A G+DQKSLRKR+
Sbjct: 267 SSSKLLTVREEHELSAGIQDLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRIN 326
Query: 449 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTY 270
G + + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD T+GF+FSTY
Sbjct: 327 YGTQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTY 386
Query: 269 AHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 90
AHWWI+QA+ K+L+ QS+++ +P + VEA ++++ + + R P +E+++ TG S
Sbjct: 387 AHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYTEKGRHPENEEVAEATGLS 446
Query: 89 KTRIKDVMSYRKTFVSLD 36
R+ V+ K SLD
Sbjct: 447 MKRLMAVLLSPKPPRSLD 464
>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
subsp. vesca]
Length = 616
Score = 195 bits (496), Expect = 1e-47
Identities = 95/195 (48%), Positives = 132/195 (67%)
Frame = -2
Query: 620 RLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 441
RLLTANEEI S +Q+L KLEK+++ + G +PT QWA A G+DQK+LRKR+ G
Sbjct: 317 RLLTANEEIELSEGIQELLKLEKLQEDLAQRCGTQPTFAQWAAAAGVDQKTLRKRVNYGI 376
Query: 440 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTYAHW 261
+ KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD ++GF+FSTYAHW
Sbjct: 377 MCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 436
Query: 260 WIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFSKTR 81
WI+QA+ K+L+ QS+ + +P + VEA ++R+ K + R P +E+++ TG S R
Sbjct: 437 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLSMKR 496
Query: 80 IKDVMSYRKTFVSLD 36
+ V+ K SL+
Sbjct: 497 LAAVLLTPKAPRSLE 511
>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 195 bits (496), Expect = 1e-47
Identities = 92/198 (46%), Positives = 134/198 (67%)
Frame = -2
Query: 629 SNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 450
S RLLTA EE+ S +QDL KLEK+++ +++ G +PT QWA A G+DQK+LR+R
Sbjct: 273 STSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTN 332
Query: 449 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTY 270
G + KM+ N+RLV+SIA YQ G+ +QDLVQ GC GLVRG EKFD ++GF+FSTY
Sbjct: 333 YGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTY 392
Query: 269 AHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 90
AHWWI+QA+ K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ TG S
Sbjct: 393 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLS 452
Query: 89 KTRIKDVMSYRKTFVSLD 36
R+ V+ K SLD
Sbjct: 453 MKRLNAVLLTPKAPRSLD 470
>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 578
Score = 195 bits (496), Expect = 1e-47
Identities = 92/198 (46%), Positives = 134/198 (67%)
Frame = -2
Query: 629 SNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 450
S RLLTA EE+ S +QDL KLEK+++ +++ G +PT QWA A G+DQK+LR+R
Sbjct: 276 STSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTN 335
Query: 449 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTY 270
G + KM+ N+RLV+SIA YQ G+ +QDLVQ GC GLVRG EKFD ++GF+FSTY
Sbjct: 336 YGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTY 395
Query: 269 AHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 90
AHWWI+QA+ K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ TG S
Sbjct: 396 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLS 455
Query: 89 KTRIKDVMSYRKTFVSLD 36
R+ V+ K SLD
Sbjct: 456 MKRLNAVLLTPKAPRSLD 473
>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
gi|548831956|gb|ERM94758.1| hypothetical protein
AMTR_s00011p00258380 [Amborella trichopoda]
Length = 570
Score = 195 bits (495), Expect = 2e-47
Identities = 93/198 (46%), Positives = 135/198 (68%)
Frame = -2
Query: 629 SNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 450
++ +LLTA EE+ S +QDL KLEK+ ++ ++ G EPT QWA A GIDQK+LR+RL
Sbjct: 267 NSTKLLTATEELELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGIDQKALRRRLS 326
Query: 449 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTY 270
G + KM+ N+RLV+SIA YQ +G+ +QDLVQ GC GLVRG EKFD ++GF+FSTY
Sbjct: 327 YGTHCKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFKFSTY 386
Query: 269 AHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 90
AHWWI+QA+ K+L+ QS+ + +P + V+A ++R+ ++ R P +E+++ TG S
Sbjct: 387 AHWWIKQAVRKSLSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDEEVAEATGLS 446
Query: 89 KTRIKDVMSYRKTFVSLD 36
R+ V+ K SLD
Sbjct: 447 MKRLTTVLLTPKAPRSLD 464
>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
lycopersicum]
Length = 613
Score = 194 bits (494), Expect = 2e-47
Identities = 95/195 (48%), Positives = 134/195 (68%)
Frame = -2
Query: 620 RLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 441
RLLTA+EE SR +QDL KLE+++ + ++ G +PT QWA A G+DQ +LRKRL G
Sbjct: 314 RLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGI 373
Query: 440 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTYAHW 261
+ KM+ N+RLV+SIA YQ +G+ LQDLVQ GC GLVRG EKFD T+GF+FSTYAHW
Sbjct: 374 LCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHW 433
Query: 260 WIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFSKTR 81
WI+QA+ K+L+ QS+ + +P + VEA ++++ + + ++ R P E+++ TG S R
Sbjct: 434 WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEATGLSMKR 493
Query: 80 IKDVMSYRKTFVSLD 36
+ VM K SLD
Sbjct: 494 LAAVMLTPKAPRSLD 508
>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
gi|557095448|gb|ESQ36030.1| hypothetical protein
EUTSA_v10007187mg [Eutrema salsugineum]
Length = 579
Score = 194 bits (493), Expect = 3e-47
Identities = 92/198 (46%), Positives = 135/198 (68%)
Frame = -2
Query: 629 SNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 450
S+ +LLTA EE S +QDL KLE+++ + ++ G +PT QWA A G+DQKSLRKR+
Sbjct: 277 SSSKLLTAREEQELSEGIQDLLKLERLQAELTERCGHQPTFAQWASAAGVDQKSLRKRIN 336
Query: 449 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTY 270
G + + +M+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD T+GF+FSTY
Sbjct: 337 YGTQCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTY 396
Query: 269 AHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 90
AHWWI+QA+ K+L+ QS+++ +P + VEA ++++ + + + P +E+++ TG S
Sbjct: 397 AHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKQPENEEVAEATGLS 456
Query: 89 KTRIKDVMSYRKTFVSLD 36
R+ V+ K SLD
Sbjct: 457 MKRLMAVLLSPKPPRSLD 474
>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
tuberosum]
Length = 613
Score = 194 bits (492), Expect = 4e-47
Identities = 94/195 (48%), Positives = 134/195 (68%)
Frame = -2
Query: 620 RLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLEEGY 441
RLLTA+EE SR +QDL KLE+++ + ++ G +PT QWA A G+DQ +LRKRL G
Sbjct: 314 RLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGI 373
Query: 440 ESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTYAHW 261
+ KM+ N+RLV+SIA YQ +G+ LQDLVQ GC GLVRG EKFD T+GF+FSTYAHW
Sbjct: 374 LCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHW 433
Query: 260 WIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFSKTR 81
WI+QA+ K+L+ QS+++ +P + VEA ++++ + + ++ R P E+++ G S R
Sbjct: 434 WIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEAAGLSMKR 493
Query: 80 IKDVMSYRKTFVSLD 36
+ VM K SLD
Sbjct: 494 LAAVMLTPKAPRSLD 508
>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 574
Score = 193 bits (491), Expect = 5e-47
Identities = 93/198 (46%), Positives = 134/198 (67%)
Frame = -2
Query: 629 SNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 450
S RLLTA EEI S +QDL KLEK++++ ++ G PT QWA A G+DQK+LR+R+
Sbjct: 271 STSRLLTATEEIELSEGIQDLLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRRIN 330
Query: 449 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTY 270
G + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD ++GF+FSTY
Sbjct: 331 YGILCKDKMIKSNVRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 390
Query: 269 AHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 90
AHWWI+QA+ K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ TG S
Sbjct: 391 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATGLS 450
Query: 89 KTRIKDVMSYRKTFVSLD 36
R+ V+ K SL+
Sbjct: 451 MKRLAAVLLTPKAPRSLE 468
>ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arabidopsis lyrata subsp.
lyrata] gi|297335543|gb|EFH65960.1| hypothetical protein
ARALYDRAFT_470915 [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 193 bits (491), Expect = 5e-47
Identities = 92/198 (46%), Positives = 134/198 (67%)
Frame = -2
Query: 629 SNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 450
S+ +LLT EE S +QDL KLE+++ + ++ G++PT QWA A G+DQKSLRKR+
Sbjct: 268 SSSKLLTVREEHELSAGIQDLLKLERLQTELTERCGRQPTFAQWASAAGVDQKSLRKRIH 327
Query: 449 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTY 270
G + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD T+GF+FSTY
Sbjct: 328 HGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTY 387
Query: 269 AHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 90
AHWWI+QA+ K+L+ QS+++ +P + VEA ++++ + + + P +E+++ TG S
Sbjct: 388 AHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLS 447
Query: 89 KTRIKDVMSYRKTFVSLD 36
R+ V+ K SLD
Sbjct: 448 MKRLMAVLLSPKPPRSLD 465
>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
sinensis]
Length = 525
Score = 193 bits (490), Expect = 6e-47
Identities = 93/198 (46%), Positives = 134/198 (67%)
Frame = -2
Query: 629 SNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 450
S+ RLLTANEE+ S +QDL KLE +++ ++ G PT QWA A G+DQ+ LR+RL
Sbjct: 222 SSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLN 281
Query: 449 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTY 270
G + KM++ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD ++GF+FSTY
Sbjct: 282 YGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 341
Query: 269 AHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 90
AHWWI+QA+ K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ TG S
Sbjct: 342 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLS 401
Query: 89 KTRIKDVMSYRKTFVSLD 36
R+ V+ K SLD
Sbjct: 402 MKRLHAVLLTPKAPRSLD 419
>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
sinensis]
Length = 605
Score = 193 bits (490), Expect = 6e-47
Identities = 93/198 (46%), Positives = 134/198 (67%)
Frame = -2
Query: 629 SNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 450
S+ RLLTANEE+ S +QDL KLE +++ ++ G PT QWA A G+DQ+ LR+RL
Sbjct: 302 SSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLN 361
Query: 449 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTY 270
G + KM++ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD ++GF+FSTY
Sbjct: 362 YGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 421
Query: 269 AHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 90
AHWWI+QA+ K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ TG S
Sbjct: 422 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLS 481
Query: 89 KTRIKDVMSYRKTFVSLD 36
R+ V+ K SLD
Sbjct: 482 MKRLHAVLLTPKAPRSLD 499
>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
rpoD1, putative [Ricinus communis]
Length = 569
Score = 193 bits (490), Expect = 6e-47
Identities = 91/198 (45%), Positives = 135/198 (68%)
Frame = -2
Query: 629 SNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLRKRLE 450
S RLLTA+EE+ S +QDL KLE+++++ ++ G +PT QWA A G+DQ++LRKR+
Sbjct: 267 STSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFAQWAAAAGVDQRTLRKRIN 326
Query: 449 EGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFRFSTY 270
G + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD ++GF+FSTY
Sbjct: 327 HGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 386
Query: 269 AHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDITGFS 90
AHWWI+QA+ K+L+ QS+ + +P + VEA ++++ + ++ R P +E+++ G S
Sbjct: 387 AHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLS 446
Query: 89 KTRIKDVMSYRKTFVSLD 36
R+ V+ K SLD
Sbjct: 447 MKRLSAVLLTPKAPRSLD 464
>gb|AAB69385.1| sigma factor 2 [Arabidopsis thaliana]
Length = 574
Score = 193 bits (490), Expect = 6e-47
Identities = 92/202 (45%), Positives = 135/202 (66%)
Frame = -2
Query: 641 TKNQSNRRLLTANEEISFSRKVQDLHKLEKIKQQYKDKMGKEPTINQWAEAVGIDQKSLR 462
T + S +LLT EE S +QDL KLE+++ + ++ G++PT QWA A G+DQKSLR
Sbjct: 266 TTSSSKLKLLTVREEHELSAGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLR 325
Query: 461 KRLEEGYESRSKMVSCNLRLVVSIATKYQNMGIGLQDLVQAGCLGLVRGIEKFDGTRGFR 282
+R+ G + KM+ N+RLV+SIA YQ G+ LQDLVQ GC GLVRG EKFD T+GF+
Sbjct: 326 QRIHHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFK 385
Query: 281 FSTYAHWWIRQAINKTLTSQSKLVGVPANAVEAASQLRDTKTLFVEKHHRSPTLQELSDI 102
FSTYAHWWI+QA+ K+L+ QS+++ +P + VEA ++++ + + + P +E+++
Sbjct: 386 FSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEA 445
Query: 101 TGFSKTRIKDVMSYRKTFVSLD 36
TG S R+ V+ K SLD
Sbjct: 446 TGLSMKRLMAVLLSPKPPRSLD 467