BLASTX nr result
ID: Ephedra26_contig00012024
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra26_contig00012024 (547 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK23782.1| unknown [Picea sitchensis] gi|224286053|gb|ACN407... 68 2e-09 ref|XP_004296727.1| PREDICTED: mediator of RNA polymerase II tra... 56 6e-06 >gb|ABK23782.1| unknown [Picea sitchensis] gi|224286053|gb|ACN40738.1| unknown [Picea sitchensis] Length = 173 Score = 67.8 bits (164), Expect = 2e-09 Identities = 31/48 (64%), Positives = 38/48 (79%) Frame = -1 Query: 547 ELFDELEKDYPEETETYREMRAASYSEAIKQMQAAGSLPNGDTKTKTQ 404 +L +ELE++YPEE E YRE+RAAS +E KQMQA G LPNGD K KT+ Sbjct: 125 QLLEELEQEYPEEVEVYRELRAASAAELKKQMQAQGGLPNGDAKIKTE 172 >ref|XP_004296727.1| PREDICTED: mediator of RNA polymerase II transcription subunit 10b-like isoform 2 [Fragaria vesca subsp. vesca] Length = 196 Score = 55.8 bits (133), Expect = 6e-06 Identities = 26/47 (55%), Positives = 34/47 (72%) Frame = -1 Query: 544 LFDELEKDYPEETETYREMRAASYSEAIKQMQAAGSLPNGDTKTKTQ 404 L DELE+ +P+E E+YRE+RAAS +E + QA SLPNGD K K + Sbjct: 149 LLDELEQAFPDEVESYREIRAASAAETKRLAQAQSSLPNGDVKVKPE 195