BLASTX nr result

ID: Ephedra26_contig00011876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00011876
         (498 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17472.1| unknown [Picea sitchensis]                              73   5e-11
ref|XP_004134805.1| PREDICTED: SNF1-related protein kinase regul...    56   6e-06

>gb|ABR17472.1| unknown [Picea sitchensis]
          Length = 292

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 51/114 (44%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
 Frame = -3

Query: 310 MGNANVRDAGDK----------DENVATSSLSAPIPISNNSKGSESESMIXXXXXXXXXX 161
           MGNANVR+ G K           +  + +    P      S G  SESM           
Sbjct: 1   MGNANVREGGGKLAEEEAGRSYPDTHSAARHGQPGEAGRLSHGGSSESM--GHSPPDSPG 58

Query: 160 XXXXPVMFASQVPVAPLPFA-ESAVVANQQWTYNSSAADDGNSERGIPTLITWS 2
               PVMFASQVPVAPL  + E A V N  WTYNSSA++D   ERGIPT+ITWS
Sbjct: 59  RSRSPVMFASQVPVAPLSNSTEGAPVPNNPWTYNSSASEDLFYERGIPTMITWS 112


>ref|XP_004134805.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           beta-2-like [Cucumis sativus]
           gi|449479516|ref|XP_004155622.1| PREDICTED: SNF1-related
           protein kinase regulatory subunit beta-2-like [Cucumis
           sativus]
          Length = 297

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/48 (52%), Positives = 33/48 (68%)
 Frame = -3

Query: 145 VMFASQVPVAPLPFAESAVVANQQWTYNSSAADDGNSERGIPTLITWS 2
           +MF  QVPV PLP  +    ++Q W +NSS  D+  SE+GIPT+ITWS
Sbjct: 70  LMFTPQVPVVPLPRPDEVHSSSQSWMHNSSWFDEVGSEQGIPTMITWS 117


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