BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00011849
         (3056 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006827550.1| hypothetical protein AMTR_s00009p00216420 [A...   696   0.0  
gb|EMJ21636.1| hypothetical protein PRUPE_ppa000033mg [Prunus pe...   646   0.0  
ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [...   640   0.0  
emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]   638   e-180
ref|XP_004133860.1| PREDICTED: ATP-dependent helicase BRM-like [...   619   e-174
ref|XP_001756939.1| SWI/SNF class chromatin remodeling complex p...   472   e-130
ref|XP_001773072.1| SWI/SNF class chromatin remodeling complex p...   470   e-129
ref|XP_004306759.1| PREDICTED: ATP-dependent helicase BRM-like [...   463   e-127
gb|EXB30861.1| ATP-dependent helicase BRM [Morus notabilis]           462   e-127
ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [...   458   e-126
ref|XP_006397786.1| hypothetical protein EUTSA_v10001280mg [Eutr...   457   e-125
ref|XP_003570802.1| PREDICTED: ATP-dependent helicase BRM-like [...   456   e-125
dbj|BAD07923.1| SNF2 domain/helicase domain-containing protein-l...   455   e-125
gb|EEC72341.1| hypothetical protein OsI_05562 [Oryza sativa Indi...   455   e-125
ref|XP_004956998.1| PREDICTED: ATP-dependent helicase BRM-like i...   454   e-125
ref|XP_004956997.1| PREDICTED: ATP-dependent helicase BRM-like i...   454   e-125
ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [...   454   e-125
ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [...   454   e-124
ref|XP_002453160.1| hypothetical protein SORBIDRAFT_04g001010 [S...   454   e-124
ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com...   454   e-124

>ref|XP_006827550.1| hypothetical protein AMTR_s00009p00216420 [Amborella trichopoda]
            gi|548832170|gb|ERM94966.1| hypothetical protein
            AMTR_s00009p00216420 [Amborella trichopoda]
          Length = 2251

 Score =  696 bits (1796), Expect = 0.0
 Identities = 454/990 (45%), Positives = 578/990 (58%), Gaps = 39/990 (3%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            WILDRIL+K HR+GHRVLLFSTMTKLLDILEEYLQWR L YRRIDGTTSLEDRE+AI EF
Sbjct: 1335 WILDRILIKLHRTGHRVLLFSTMTKLLDILEEYLQWRGLVYRRIDGTTSLEDRESAIVEF 1394

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N PGS CF+FLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKR V+VI
Sbjct: 1395 NSPGSRCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKRAVKVI 1454

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAV +TI SY+KEDELR+GG +D EDELAGKDRYMGS+ESLVRNNIQQYKIDMADEVI
Sbjct: 1455 YMEAVADTISSYQKEDELRNGGTVDLEDELAGKDRYMGSIESLVRNNIQQYKIDMADEVI 1514

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TTQE+RR TLETLL DEER+QETVHDVPSL EVNRMIARSEEE+E+FD+MDE
Sbjct: 1515 NAGRFDQRTTQEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSEEEVELFDQMDE 1574

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLVAPIGTQEEEDKLFEVSPI 900
            E+DW  E++++ +IPKWLR GSREVN A S++SK++ K GL+  IG   EE+KL   SP 
Sbjct: 1575 ELDWTEEMIRYDEIPKWLRAGSREVNAAVSALSKKASKSGLIGHIGLYSEEEKLAAASPS 1634

Query: 901  VTPEXXXXXXXXXXXXXXXXXXXXXXXXINILRPLHTSDGGD---------EFIEASMDE 1053
               +                         + ++ L TS   D         E +EAS DE
Sbjct: 1635 KIEKKRGRPKGS-----------------STIKKLSTSQDLDTGMSNGEIGEDVEASSDE 1677

Query: 1054 KXXXXXXXXXXXXXXXXXXXXXXXXXNSQDANPIVNVQVPF-QDVKLQHNDNENIIG--- 1221
            +                            +        +P+ +D   +   NE+  G   
Sbjct: 1678 RASFMQEEEGEIGDY------------EDEGFDRSGSAIPYNKDPSEEEGQNESSRGGYG 1725

Query: 1222 --KTMEIMQSRVGYEREAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSK 1395
              K+M++ ++  G E E  SS SS  N ++N V  TS   S QKFGSL+A++A+P + SK
Sbjct: 1726 FSKSMDVTRNEEGME-EGVSSGSSSENRRVNGV-ATSTLTS-QKFGSLSALDARPGSVSK 1782

Query: 1396 TM-AEELEEGEIVQSGDSHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXAD 1572
             M +EELEEGEIV SGDSHM+ QQS S   ER++G++EQVLQ                ++
Sbjct: 1783 RMQSEELEEGEIVASGDSHMDLQQSGSWIHERDDGEDEQVLQ-PKIKRKRSIRIRRSTSE 1841

Query: 1573 KTEDKTSSEKKVIPPGNMYQQSFSHSNS-DHTKVVGQGLSNKDHGMTSEMNSDKSDHLGA 1749
            KTED+ S+EK     GN  Q  F++  S D+     Q L  + +   +E  S + D    
Sbjct: 1842 KTEDRYSNEKVSHQHGNSNQ--FANKVSVDYGMQQRQTLELETY---TEPVSGRQDPSDP 1896

Query: 1750 MSKRRKVLPTKEDSLLEALPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGG 1929
             S++R+ LP +  +        K     K +R N  +E   D  E+S E  D+K+    G
Sbjct: 1897 SSRQRRNLPPRRGT-----DSPKLHGTPKQSRVNELLEHVGDGIEYSRESSDSKSLRMTG 1951

Query: 1930 SSSSVKGHMSDIIQKKCKTIYGKLHGAINLS------------KRNENPGHHRST---AS 2064
                  G  SD ++KKCK +  KL  AI+              KR+EN G  R      +
Sbjct: 1952 PVFG-SGQTSDNLRKKCKHVLSKLQRAIDKDGHQLVPILTDFWKRSENAGGVRGINMGNN 2010

Query: 2065 HIDPRIIEQRLDRFEYGSVLDFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQ 2244
             +D R I+QR+DR +Y S  D A D+QLML+N + +  Y  EV+ DAR+LQ++  + +  
Sbjct: 2011 PLDLRAIDQRVDRGDYSSGTDLAADIQLMLKNATHYCGYSAEVRSDARKLQSLAFECLKV 2070

Query: 2245 TFPDVDFSSMKTRSLVSISHNTTCASPK-----QLPFQPRVHKSQEDLNLVSELPPTRHA 2409
             FP+ D    KT  L S +  T+  SP+       PF+P     Q+ ++LV   P TRH 
Sbjct: 2071 VFPETDLREAKT--LGSFTGPTSTLSPRNPSQNNRPFKPVDDSDQDHVDLV---PTTRH- 2124

Query: 2410 ARSSNVVDSDMREKLNH--RENFTRTPKESKVIFDDRLQHKERGKGEKAQVTHPGDLVIC 2583
             R S+  +   ++  +H  R N  R P++                 + A +THPGDLVIC
Sbjct: 2125 HRGSHPSEDGPKDPRSHPSRPNEPRGPRD-----------------DVASLTHPGDLVIC 2167

Query: 2584 XXXXXXXXXXXXXSRLINTVPEVSQPNRAMPPKDIWHPGQVMQQQAHGWPQFAGMEKNDN 2763
                            +  V +  QP      ++  +     Q+Q HGW Q  G +    
Sbjct: 2168 KKKRKDRDKGAVK---VRGVQDTCQPLMGQAVRE--NTMSQNQRQPHGWLQL-GNKAGGG 2221

Query: 2764 NSLQVEKDAQWAKPVKRLRTDTGKRRPSHI 2853
             S     + QWAKPVKRLRTDTGKRRPSHI
Sbjct: 2222 TSSGGVNELQWAKPVKRLRTDTGKRRPSHI 2251


>gb|EMJ21636.1| hypothetical protein PRUPE_ppa000033mg [Prunus persica]
          Length = 2271

 Score =  646 bits (1666), Expect = 0.0
 Identities = 410/979 (41%), Positives = 540/979 (55%), Gaps = 28/979 (2%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            WILDRIL+K  R+GHRVLLFSTMTKLLDILEEYLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1354 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDF 1413

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N P SDCF+FLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREV+VI
Sbjct: 1414 NSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1473

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ I S++KEDELR+GG +D ED+LAGKDRY+GS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1474 YMEAVVDKISSHQKEDELRNGGTVDSEDDLAGKDRYIGSIESLIRNNIQQYKIDMADEVI 1533

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL DEER+QET+HDVPSL EVNRMIARSEEE+E+FD+MDE
Sbjct: 1534 NAGRFDQRTTHEERRMTLETLLHDEERYQETLHDVPSLQEVNRMIARSEEEVELFDQMDE 1593

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLVAPIGTQEEEDKLFEVSPI 900
            E+DW  E+ K++Q+PKWLR G+REVN   +S+SK+  K  L+      E  +   + SP 
Sbjct: 1594 ELDWIEEMTKYNQVPKWLRTGTREVNAVIASLSKRPSKNTLLGGNIGLETSEMGSDSSPK 1653

Query: 901  VTPEXXXXXXXXXXXXXXXXXXXXXXXXINILRPLHTSDGGDEFIEASMDEKXXXXXXXX 1080
               +                                  D   E+ EAS DE+        
Sbjct: 1654 TERKRGRPKGKKHPSYK------------------ELDDDNGEYSEASSDER----NEYS 1691

Query: 1081 XXXXXXXXXXXXXXXXXNSQDANPIVNVQVPFQDVKLQHNDNENIIGKTMEIMQSRVGYE 1260
                              + +A PI+  QV       + +  E  +G        RV   
Sbjct: 1692 LHEEEGEVGELEDDEYSGAVEATPIIKEQV-------EEDGPEYDVGYDYPQASERVRNN 1744

Query: 1261 REAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSKTMAEELEEGEIVQSG 1440
               E + SS  ++   ++  T    S QKFGSL+AI+ +P + SK + +++EEGEIV SG
Sbjct: 1745 HMLEEAGSSGSSSDSRRLMQTVSPVSSQKFGSLSAIDGRPGSVSKRLPDDVEEGEIVVSG 1804

Query: 1441 DSHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXADKTEDKTSSEKKVIPPG 1620
            DSHM+ QQS S   +R+EG++EQVLQ                 ++ E+K+ SE   +  G
Sbjct: 1805 DSHMDHQQSGSWNHDRDEGEDEQVLQPKIKRKRSLRVRPRHTMERPEEKSGSETPSLQRG 1864

Query: 1621 NMYQQSFSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHLGAMSKRRKVLPTK---EDS 1791
            +     F   +   T    Q  ++ +  M  + ++ K D   + SK R+ LP +     S
Sbjct: 1865 DSSLLPFQADHKSQT----QSRADSEIKMYGDPHALKHDQSDSSSKTRRSLPARRVGNAS 1920

Query: 1792 LLEALPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSVKG-HMSDII 1968
             L A P        K+ R N   + + D  EH  E  D K   T G  + V G  M DII
Sbjct: 1921 KLHASP--------KSGRSNSVPDPAEDAAEHHRENWDGKIGSTSG--TPVYGTKMPDII 1970

Query: 1969 QKKCKTIYGKLHGAI------------NLSKRNENPGHHRSTASHI-DPRIIEQRLDRFE 2109
            Q++CK +  KL   I            +L KR EN G+   + ++I D R I+QR++R E
Sbjct: 1971 QRRCKNVISKLQRRIDKEGPQIVPLLTDLWKRIENAGYASGSGNNILDLRKIDQRIERLE 2030

Query: 2110 YGSVLDFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSSMKTRSL 2289
            Y  V++   DVQ ML++  +   +  EV+ +AR++  +F   +   F D DF   ++ +L
Sbjct: 2031 YNGVMELVFDVQSMLKSAMQFYGFSHEVRTEARKVHDLFFDILKIAFADTDFREARS-AL 2089

Query: 2290 VSISHNTTCASPKQLPFQPRVHKSQEDLNLVSELPPTRHAARSSNVV----DSDMREKLN 2457
               S   T  +P   P      K  + +N V   P  +   +    +    D+ MR  + 
Sbjct: 2090 SFTSPVLTTNAPSPRPVTVGQSKRHKHINEVEPDPGPQQKPQQRTPIFSSEDTRMRSHMP 2149

Query: 2458 HRENFTRTPKESKVIFDDRLQHKERGKGEKAQVTHPGDLVICXXXXXXXXXXXXXSRLIN 2637
            H        KES++        +   + +  Q+ HPGDLVIC              R  +
Sbjct: 2150 H--------KESRLGSGSGNSREHYQQDDSPQLAHPGDLVICKKKRKDREKSVVKPRTGS 2201

Query: 2638 TVPEVSQPNRAMPPKDIWHPG-------QVMQQQAHGWPQFAGMEKNDNNSLQVEKDAQW 2796
              P VS P+     + I  PG       ++ QQ + GW        N     +      W
Sbjct: 2202 AGP-VSPPSMG---RSIKSPGSNSVPKERLTQQTSQGWTNQPAQPSN-----KAAGSVGW 2252

Query: 2797 AKPVKRLRTDTGKRRPSHI 2853
            A PVKRLRTD+GKRRPSH+
Sbjct: 2253 ANPVKRLRTDSGKRRPSHL 2271


>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
          Length = 2263

 Score =  640 bits (1652), Expect = 0.0
 Identities = 415/986 (42%), Positives = 550/986 (55%), Gaps = 35/986 (3%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            WILDRIL+K  R+GHRVLLFSTMTKLLDILEEYLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1343 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDF 1402

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N  GSDCF+FLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQ REV+VI
Sbjct: 1403 NSAGSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVI 1462

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ I S++KEDE RSGG +D ED+LAGKDRY+GS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1463 YMEAVVDKISSHQKEDEFRSGGTVDSEDDLAGKDRYIGSIESLIRNNIQQYKIDMADEVI 1522

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL DEER+QETVHDVPSL EVNRMIARSE+E+E+FD+MDE
Sbjct: 1523 NAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQMDE 1582

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLVAPIGTQEEEDKLFEVSPI 900
            E++W  ++ ++ Q+PKWLR  +R+VN A +++SK+  K    A     E  +K  ++SP 
Sbjct: 1583 ELNWIEDMTRYDQVPKWLRASTRDVNIAVANLSKKPSKNTFFAANIGLESSEKGSDLSPK 1642

Query: 901  VTPEXXXXXXXXXXXXXXXXXXXXXXXXINILRPLHTSDGGDEFIEASMDEKXXXXXXXX 1080
               +                          + R L   +G  EF EAS DE+        
Sbjct: 1643 TERKRGRPKGKP------------------VYRELDDENG--EFSEASSDER-------- 1674

Query: 1081 XXXXXXXXXXXXXXXXXNSQDANPIVNVQVPFQDVKLQHNDNENIIGKTMEIMQSRVGYE 1260
                               ++ +  V  Q   +D   Q  ++  I     E +++     
Sbjct: 1675 --NGYSAHEEEGEIGEFEDEEFSGAVGAQPSNKD---QSEEDGRICDGGYEYLRALESTR 1729

Query: 1261 R-----EAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSKTMAEELEEGE 1425
                  EA SS SS  + +L Q  + SP+ S +KFGSL+A++A+P++ SK + +ELEEGE
Sbjct: 1730 NKHILDEAGSSGSSSDSRRLTQ--MVSPSISSRKFGSLSALDARPSSLSKRLPDELEEGE 1787

Query: 1426 IVQSGDSHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXADKTEDKTSSEKK 1605
            I  SGDSHM+ QQS S   +R+EG++EQVLQ                 ++ E+K+S+EK 
Sbjct: 1788 IAVSGDSHMDHQQSGSWIHDRDEGEDEQVLQPKIKRKRSIRIRPRHTVERPEEKSSNEKS 1847

Query: 1606 VIPPGNMYQQSFSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHLGAMSKRRKVLPTKE 1785
             +  G+  Q        DH K   Q  S+ +  +  E N+ K D   +  K R+ LP+++
Sbjct: 1848 SLQRGDSSQLPM---QVDH-KYEAQLRSDPEAKLFGESNAFKHDQSDSSLKSRRNLPSRK 1903

Query: 1786 ---DSLLEALPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSVKGHM 1956
                S L A P        K+ + N     + DV EHS E  D K   TGG        M
Sbjct: 1904 IGNTSKLHASP--------KSGKLNCMSARAEDVAEHSREGWDGKVMNTGGP------RM 1949

Query: 1957 SDIIQKKCKTIYGKLHGAINLS------------KRNENPGHHRSTASHI-DPRIIEQRL 2097
             +I+Q+KCK +  KL   I+              KR EN G+     ++I D R I+QR+
Sbjct: 1950 PEIMQRKCKNVISKLQRRIDKEGHQIVPLLTDWWKRVENSGYISGPGNNILDLRKIDQRI 2009

Query: 2098 DRFEYGSVLDFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSSMK 2277
            DR EY  V++   DVQ ML+N  ++     EV+++AR++  +F   +   FPD DF   +
Sbjct: 2010 DRLEYIGVMELVFDVQQMLKNSMQYYGLSHEVRVEARKVHELFFNILKIAFPDTDFREAR 2069

Query: 2278 TRSLVS--ISHNTTCASPKQLPF-QPRVHKSQEDLNLVSELPPTR------HAARSSNVV 2430
                 S  +S   +  SP+Q    Q + HK   ++      PP +       AA ++   
Sbjct: 2070 NAISFSGPVSTPASAPSPRQAAVGQGKRHKPINEVEPDPSPPPKQLLRGAAAAAAAAAAA 2129

Query: 2431 DSDMREKLNHRENFTRTPKESKVIFDDRLQHKERGKGEKAQVTHPGDLVICXXXXXXXXX 2610
              D R K +  +  +R    S            R + +   +THPGDLVI          
Sbjct: 2130 SEDTRAKSHISQKESRLGSSS-----------SRDQDDSPLLTHPGDLVISKKKRKDREK 2178

Query: 2611 XXXXSRLINTVPEVSQPN-----RAMPPKDIWHPGQVMQQQAHGWPQFAGMEKNDNNSLQ 2775
                 R  ++ P VS P+     R+  P  +   G+  QQ  H     +   +  N    
Sbjct: 2179 SAAKPRSGSSGP-VSPPSMGRSIRSPGPGSMQKDGRSTQQATHQQAWASQPAQQANGGSG 2237

Query: 2776 VEKDAQWAKPVKRLRTDTGKRRPSHI 2853
                  WA PVKR+RTD GKRRPSH+
Sbjct: 2238 GGGTVGWANPVKRMRTDAGKRRPSHL 2263


>emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]
          Length = 2238

 Score =  638 bits (1645), Expect = e-180
 Identities = 414/986 (41%), Positives = 549/986 (55%), Gaps = 35/986 (3%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            WILDRIL+K  R+GHRVLLFSTMTKLLDILEEYLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1318 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDF 1377

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N  GSDCF+FLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQ REV+VI
Sbjct: 1378 NSAGSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVI 1437

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ I S++KEDE RSGG +D ED+LAGKDRY+GS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1438 YMEAVVDKISSHQKEDEFRSGGTVDSEDDLAGKDRYIGSIESLIRNNIQQYKIDMADEVI 1497

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL DEER+QETVHDVPSL EVNRMIARSE+E+E+FD+MDE
Sbjct: 1498 NAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQMDE 1557

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLVAPIGTQEEEDKLFEVSPI 900
            E++W  ++ ++ Q+PKWLR  +R+VN A +++SK+  K    A     E  +K  ++SP 
Sbjct: 1558 ELNWIEDMTRYDQVPKWLRASTRDVNIAVANLSKKPSKNTFFAANIGLESSEKGSDLSPK 1617

Query: 901  VTPEXXXXXXXXXXXXXXXXXXXXXXXXINILRPLHTSDGGDEFIEASMDEKXXXXXXXX 1080
               +                          + R L   +G  EF EAS DE+        
Sbjct: 1618 TERKRGRPKGKP------------------VYRELDDENG--EFSEASSDER-------- 1649

Query: 1081 XXXXXXXXXXXXXXXXXNSQDANPIVNVQVPFQDVKLQHNDNENIIGKTMEIMQSRVGYE 1260
                               ++ +  V  Q   +D   Q  ++  I     E +++     
Sbjct: 1650 --NGYSAHEEEGEIGEFEDEEFSGAVGAQPSNKD---QSEEDGRICDGGYEYLRALESTR 1704

Query: 1261 R-----EAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSKTMAEELEEGE 1425
                  EA SS SS  + +L Q  + SP+ S +KFGSL+A++A+P++ SK + +ELEEGE
Sbjct: 1705 NKHILDEAGSSGSSSDSRRLTQ--MVSPSISSRKFGSLSALDARPSSLSKRLPDELEEGE 1762

Query: 1426 IVQSGDSHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXADKTEDKTSSEKK 1605
            I  SGDSHM+ QQS S   +R+EG++EQVLQ                 ++ E+K+S+EK 
Sbjct: 1763 IAVSGDSHMDHQQSGSWIHDRDEGEDEQVLQPKIKRKRSIRIRPRHTVERPEEKSSNEKS 1822

Query: 1606 VIPPGNMYQQSFSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHLGAMSKRRKVLPTKE 1785
             +  G+  Q        DH K   Q  S+ +  +  E N+ K D   +  K R+ LP+++
Sbjct: 1823 SLQRGDSSQLPM---QVDH-KYEAQLRSDPEAKLFGESNAFKHDQSDSSLKSRRNLPSRK 1878

Query: 1786 ---DSLLEALPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSVKGHM 1956
                S L A P        K+ + N     + DV EHS E  D K   TGG        M
Sbjct: 1879 IGNTSKLHASP--------KSGKLNCMSARAEDVAEHSREGWDGKVMNTGGP------RM 1924

Query: 1957 SDIIQKKCKTIYGKLHGAINLS------------KRNENPGHHRSTASHI-DPRIIEQRL 2097
             +I+Q+KCK +  KL   I+              KR E  G+     ++I D R I+QR+
Sbjct: 1925 PEIMQRKCKNVISKLQRRIDKEGHQIVPLLTDWWKRVEXSGYISGPGNNILDLRKIDQRI 1984

Query: 2098 DRFEYGSVLDFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSSMK 2277
            DR EY  V++   DVQ ML+N  ++     EV+++AR++  +F   +   FPD DF   +
Sbjct: 1985 DRLEYIGVMELVFDVQQMLKNSMQYYGLSHEVRVEARKVHELFFNILKIAFPDTDFREAR 2044

Query: 2278 TRSLVS--ISHNTTCASPKQLPF-QPRVHKSQEDLNLVSELPPTR------HAARSSNVV 2430
                 S  +S   +  SP+Q    Q + HK   ++      PP +       AA ++   
Sbjct: 2045 NAISFSGPVSTPASAPSPRQAAVGQGKRHKPINEVEPDPSPPPKQLLRGAAAAAAAAAAA 2104

Query: 2431 DSDMREKLNHRENFTRTPKESKVIFDDRLQHKERGKGEKAQVTHPGDLVICXXXXXXXXX 2610
              D R K +  +  +R    S            R + +   +THPGDLVI          
Sbjct: 2105 SEDTRAKSHISQKESRLGSSS-----------SRDQDDSPLLTHPGDLVISKKKRKDREK 2153

Query: 2611 XXXXSRLINTVPEVSQPN-----RAMPPKDIWHPGQVMQQQAHGWPQFAGMEKNDNNSLQ 2775
                 R  ++ P VS P+     R+  P  +   G+  QQ  H     +   +  N    
Sbjct: 2154 SAAKPRSGSSGP-VSPPSMGRSIRSPGPGSMQKDGRSTQQATHQQAWASQPAQQANGGSG 2212

Query: 2776 VEKDAQWAKPVKRLRTDTGKRRPSHI 2853
                  WA PVKR+RTD GKRRPSH+
Sbjct: 2213 GGGTVGWANPVKRMRTDAGKRRPSHL 2238


>ref|XP_004133860.1| PREDICTED: ATP-dependent helicase BRM-like [Cucumis sativus]
          Length = 2247

 Score =  619 bits (1595), Expect = e-174
 Identities = 407/981 (41%), Positives = 524/981 (53%), Gaps = 30/981 (3%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            WILDRIL+K  ++GHRVLLFSTMTKLLDILEEYLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1336 WILDRILIKLQKTGHRVLLFSTMTKLLDILEEYLQWRRLIYRRIDGTTSLEDRESAIVDF 1395

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N P SDCF+FLLSIRAAGRGLNLQSADTV+IYDPDPNPKNEEQAVARAHRIGQ REV+VI
Sbjct: 1396 NSPDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQTREVKVI 1455

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+   S +KEDELRSGG  D ED+ AGKDRYMGS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1456 YMEAVVDKFSSNQKEDELRSGGSGDLEDDFAGKDRYMGSIESLIRNNIQQYKIDMADEVI 1515

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL DEER+QETVHDVPSL EVNRMIARSE+E+E+FD+MDE
Sbjct: 1516 NAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQMDE 1575

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLVAPIGTQEEEDKLFEVSPI 900
            E DW  E+ ++ QIPKWLR  +REVNNA +++SK+  K  ++   G   E  +L   S +
Sbjct: 1576 EFDWTEEMTRYDQIPKWLRASTREVNNAIANLSKKPSK-NILFGAGYGLESSELGSDSSL 1634

Query: 901  VTPEXXXXXXXXXXXXXXXXXXXXXXXXINILRPLHTSDGGDEFIEASMDEKXXXXXXXX 1080
             T                            I       D   EF EAS DE+        
Sbjct: 1635 RTERKRGRPKGK-----------------KIPNYKEMDDDNGEFSEASSDER-------- 1669

Query: 1081 XXXXXXXXXXXXXXXXXNSQDANPIVNVQVPFQDVKLQHNDNENIIGKTM----EIMQSR 1248
                             N             F+D +         + K          +R
Sbjct: 1670 -----------------NGYSVQEEEGEIAEFEDDEYSRGIEATQLNKDQMEDGPDCDAR 1712

Query: 1249 VGYEREA--------ESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSKTMA 1404
              Y R+         E+  S   ++      + SP +S QKFG L+A++A+P++ SK + 
Sbjct: 1713 YDYPRDGARNNHLLEEAGSSGSSSSSRRLTQMVSPVSS-QKFGFLSALDARPSSLSKRLP 1771

Query: 1405 EELEEGEIVQSGDSHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXADKTED 1584
            +ELEEGEI  SGDSHME QQSES   +RE+G+EEQVLQ                A++ E+
Sbjct: 1772 DELEEGEIAISGDSHMENQQSESWIHDREDGEEEQVLQPKIKRKRSLRLRPRPPAERREE 1831

Query: 1585 KTSSEKKVIPPGNMYQQSFSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHLGAMSKRR 1764
            K  +E + +  G+    S S   +DH     +  ++ +     + NS K +   + SK R
Sbjct: 1832 KIYNETQSLQYGD--SSSPSPFLADHK--FSKFKNDPEAKPYGDSNSLKHEQNESSSKNR 1887

Query: 1765 KVLPTKEDSLLEALPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSV 1944
            + L     S     P SK     K++R N    S+ D  EHS E  D K   TGG +S  
Sbjct: 1888 RNL-----SARRVAPSSKLHSSPKSSRLNSVTRSADDAVEHSRENWDGKQSNTGG-NSGF 1941

Query: 1945 KGHMSDIIQKKCKTIYGKLHG------------AINLSKRNENPGHHRSTASHI-DPRII 2085
               M DIIQ++CK +  KL                +L KR  N       +++I D R I
Sbjct: 1942 GSKMPDIIQRRCKNVISKLQSRTDKEGHQIVPLLTDLWKRMGNSSLPSGVSNNILDLRKI 2001

Query: 2086 EQRLDRFEYGSVLDFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDF 2265
            +QR+DR EY  V++   DVQ ML+   +   +  EV+ +A+++  +F   +   FPD DF
Sbjct: 2002 DQRIDRLEYNGVMELVFDVQFMLKGAMQFYGFSHEVRFEAKKVHDLFFDILKIAFPDTDF 2061

Query: 2266 SSMKTRSLVSISHNTTCASPKQLPF-QPRVHKSQEDLNLVSELPPTRHAARSSNVVDSDM 2442
               +         ++  A+ ++ P  Q +  K   D++  ++  P   +     V   + 
Sbjct: 2062 REARNALSFQSPGSSAAATMRERPAGQIKRQKMVHDMD--TDSGPPHKSLHRGPVSGEET 2119

Query: 2443 REKLNHRENFTRTPKESKVIFDDRLQHKERGKGEKAQVTHPGDLVICXXXXXXXXXXXXX 2622
            R    H      T   S     D+ Q +     E   +THPG+LVIC             
Sbjct: 2120 RATRGHLIAQKETRFGSGSGSKDQYQIE-----EPPLLTHPGELVICKKKRKDREKSIVK 2174

Query: 2623 SRLINTVPEVSQPNRAMPPKDIWHPGQVM----QQQAHGWPQFAGMEKNDNNSLQVEKDA 2790
             R  +  P    P+ A   + I  PG        +Q+ GWP                   
Sbjct: 2175 PRTGSGGPVSPPPSGA---RGIRSPGLSSVPKDSKQSQGWPNQPQSANGSGGG-----PV 2226

Query: 2791 QWAKPVKRLRTDTGKRRPSHI 2853
             WA PVKRLRTD GKRRPSHI
Sbjct: 2227 SWANPVKRLRTDAGKRRPSHI 2247


>ref|XP_001756939.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella
            patens] gi|162691810|gb|EDQ78170.1| SWI/SNF class
            chromatin remodeling complex protein [Physcomitrella
            patens]
          Length = 2486

 Score =  472 bits (1214), Expect = e-130
 Identities = 228/295 (77%), Positives = 267/295 (90%), Gaps = 1/295 (0%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            WILDRILVK H++GHRVLLFSTMT+LLDILE+YLQWR L YRRIDG T+LE RE+AI EF
Sbjct: 1487 WILDRILVKLHKTGHRVLLFSTMTRLLDILEDYLQWRRLIYRRIDGMTTLEARESAIVEF 1546

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N+P SDCF+FLLSIRAAGRGLNLQ+ADTV++YDPDPNPKNEEQAVARAHRIGQKREVRVI
Sbjct: 1547 NRPDSDCFIFLLSIRAAGRGLNLQTADTVIVYDPDPNPKNEEQAVARAHRIGQKREVRVI 1606

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDD-EDELAGKDRYMGSVESLVRNNIQQYKIDMADEV 537
            YMEAVVE+ PSYEKEDELRSGG +D+ +DE+AGKDRY+GSVESLVRNNIQQ+KIDMADEV
Sbjct: 1607 YMEAVVESTPSYEKEDELRSGGSLDEKDDEMAGKDRYVGSVESLVRNNIQQHKIDMADEV 1666

Query: 538  INAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMD 717
            INAG FDQ+TTQE+RR TLE LL DEER+Q+TVHDVP+L EVNRMIAR+++E+E+FD+MD
Sbjct: 1667 INAGRFDQRTTQEERRLTLEALLHDEERYQQTVHDVPTLQEVNRMIARTDDELELFDKMD 1726

Query: 718  EEMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLVAPIGTQEEEDKL 882
            EE  W G+L+ HH+IPKW+RVGSREVN A  + SK+S+K+G +  +GTQE ED L
Sbjct: 1727 EEWKWVGDLLPHHKIPKWMRVGSREVNAAIEATSKESMKKGFLGAVGTQEAEDLL 1781



 Score =  139 bits (351), Expect = 6e-30
 Identities = 145/544 (26%), Positives = 226/544 (41%), Gaps = 58/544 (10%)
 Frame = +1

Query: 1393 KTMAEELEEGEIVQSGDSHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXAD 1572
            + M +ELEEGEI  S DS    Q+SES  + REE ++    +                  
Sbjct: 1965 RRMGDELEEGEIAASVDSD---QRSESWIEGREEAEDVADYEVDHTIQPQKKRKRSRSHR 2021

Query: 1573 KTEDKTSSEKKVIPPGNMYQQS---FSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHL 1743
            +T       ++    G+  ++     S  +++  K      SN      +  + DK+DH 
Sbjct: 2022 RTVHLDGLGERETSNGSFNERETPLLSFRSNNRAKQNPPEWSNFGTVDPAPQSYDKTDHW 2081

Query: 1744 GAMSKRRKVLPTKEDSLLEALPYSKQRVLIKNNRCNGYVE--SSPDVP-EHSTERLDTKA 1914
            G  +K+R V         EA   ++ R++ K++R NG  E  + PD+  ++ T R     
Sbjct: 2082 GGSAKKRSV------PFPEAQVPARPRIVFKHSRANGLHEPAAEPDLGRDNRTARTQAGL 2135

Query: 1915 FYTGGSSSSVKGHMSDIIQKKCKTIYGKLHGAIN------------LSKRNENPGHHRST 2058
                GS    KG + +  QKKCK++  KLHGA+N            L KR+E P +++  
Sbjct: 2136 L---GSYCGDKGRLPEGQQKKCKSVLSKLHGAVNKDGRQIAALFLELPKRSELPEYYKVI 2192

Query: 2059 ASHIDPRIIEQRLDRFEYGSVLDFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRI 2238
            A  I+  +IE++LDR EY SVL+FA+DV LM++N +R+ +   EV+ DARRLQ +F  R+
Sbjct: 2193 ARPINAHLIEEKLDRLEYPSVLEFASDVHLMIDNAARYYSTSAEVQTDARRLQALFDSRM 2252

Query: 2239 VQTFPDVDFSSMKTRSLVSI-------------------------SHNTTCASPKQLPFQ 2343
               FP+VDFSS + RS   +                               A   Q+   
Sbjct: 2253 SLIFPEVDFSSARVRSNAPVLTPQAPPVTGSRGILQAPVVTGPRGVRRPAGAESAQIGIS 2312

Query: 2344 PRVHKSQEDLNLVSELPPTRHAARSSNVVDSDMREKLNHRENFTRTPKESKVIFDDRLQH 2523
            P   +S   ++LV  + P +     +N      ++  N +        +SKV    + + 
Sbjct: 2313 PN-SRSSTRISLVRPVAPPQEEVLVTNQEGKKSKKGGNEKLKDKNAKSKSKVNSSGKKKE 2371

Query: 2524 KERGKGEKAQ-VTHPGDLVI---CXXXXXXXXXXXXXSRLINTVPEV-----------SQ 2658
             +  + E  Q + HP DLVI                 S L+  V E+           S 
Sbjct: 2372 LQEEEAESDQGIMHPVDLVIHKKKRKGREHTGSRTVSSPLVFDVEEMREASARGFTVGSS 2431

Query: 2659 PNRAMPPKDIWHPGQVMQQQAHGWPQFAGMEKNDNNSLQVEKDAQWAKPVKRLRTDTGKR 2838
             N   PP     P       A           +  ++ Q +        +K+ RTD GKR
Sbjct: 2432 GNARAPPLATPRPRAPAASPA----------SSRLSASQPDIQVGAVTVLKKSRTDGGKR 2481

Query: 2839 RPSH 2850
            RPSH
Sbjct: 2482 RPSH 2485


>ref|XP_001773072.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella
            patens] gi|162675619|gb|EDQ62112.1| SWI/SNF class
            chromatin remodeling complex protein [Physcomitrella
            patens]
          Length = 2529

 Score =  470 bits (1209), Expect = e-129
 Identities = 225/293 (76%), Positives = 264/293 (90%), Gaps = 1/293 (0%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            WILDRILVK H++GHRVLLFSTMT+LLDILE+YLQWR L YRRIDG T+LE RE+AI EF
Sbjct: 1533 WILDRILVKLHKTGHRVLLFSTMTRLLDILEDYLQWRRLVYRRIDGMTTLEARESAIVEF 1592

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N+P SDCF+FLLSIRAAGRGLNLQ+ADTV++YDPDPNPKNEEQAVARAHRIGQKREVRV+
Sbjct: 1593 NRPNSDCFIFLLSIRAAGRGLNLQTADTVIVYDPDPNPKNEEQAVARAHRIGQKREVRVL 1652

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDD-EDELAGKDRYMGSVESLVRNNIQQYKIDMADEV 537
            YMEAVVE  PSYEKEDELRSGG +D  +DE+AGKDRY+GSVESLVRNNIQQ+KIDMADEV
Sbjct: 1653 YMEAVVENTPSYEKEDELRSGGSLDQKDDEMAGKDRYVGSVESLVRNNIQQHKIDMADEV 1712

Query: 538  INAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMD 717
            INAG FDQ+TTQE+RR TLE LL DEER+++TVHDVP+L EVNRMIAR++EE+E+FD+MD
Sbjct: 1713 INAGRFDQRTTQEERRLTLEALLHDEERYEQTVHDVPTLQEVNRMIARTDEELELFDKMD 1772

Query: 718  EEMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLVAPIGTQEEED 876
            EE  W G+L+ HH+IPKW+R+GSREVN A  S SK+++K+G +  +GTQE ED
Sbjct: 1773 EEWKWAGDLLPHHKIPKWMRIGSREVNAAIESTSKEAMKKGFLGTVGTQEAED 1825



 Score =  156 bits (395), Expect = 5e-35
 Identities = 162/600 (27%), Positives = 256/600 (42%), Gaps = 75/600 (12%)
 Frame = +1

Query: 1279 ESSFHNAKLNQVHVTSPAASIQ--KFGSLAAIEAKPATHSKTMAEELEEGEIVQSGDSHM 1452
            E SF   +++       AA  Q  KF SL+A+E++P    +   +ELEEGEI  S DS  
Sbjct: 1958 ELSFDECEVSPAKPQRGAAMSQSKKFASLSALESRPGRAEE--GDELEEGEIAASVDSD- 2014

Query: 1453 ECQQSESCPQEREE-----GDEEQVLQXXXXXXXXXXXXXXXXADKTEDKTSSEKKVIPP 1617
              Q+SES  + REE     G+E+  +Q                 D   ++  S       
Sbjct: 2015 --QRSESWMEGREEVEVAEGEEDYTIQPQKKRKRSRSHRRTAHVDGLGEREISN------ 2066

Query: 1618 GNMYQQSF-SHSNSDHTKVVGQGLSNKDHGMTSEMNS-DKSDHLGAMSKRRKVLPTKEDS 1791
            G+  ++   S      T V  + L   + G      S DK+DH G  SK+R +      +
Sbjct: 2067 GSFNERGIPSFPFRSFTTVEQKSLQLSNFGTVEPAQSYDKADHWGGASKKRSI------N 2120

Query: 1792 LLEALPYSKQRVLIKNNRCNGYVE--SSPDVPEHSTERLDTKAFYTGGSSSSVKGHMSDI 1965
            +LEA   ++ R++ K++R NG  E  + PD+   +            GS S  KG + + 
Sbjct: 2121 VLEAQAPARPRIVFKHSRGNGLQEPVAEPDLGRDNWTARSQAGLL--GSYSGDKGRLPEG 2178

Query: 1966 IQKKCKTIYGKLHGAIN------------LSKRNENPGHHRSTASHIDPRIIEQRLDRFE 2109
             QKKCK++  KLHGA+N            L KR+E P +++  A  I+   IE++LDR E
Sbjct: 2179 QQKKCKSVLSKLHGAVNKDGRQIAALFLELPKRSELPEYYKVIARPINSHSIEEKLDRME 2238

Query: 2110 YGSVLDFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSSMKTRS- 2286
            Y SVL+FA+DV LM++N +R+ +   EV+ DARRLQ +F  R+   FP+VDFSS + RS 
Sbjct: 2239 YPSVLEFASDVHLMIDNSARYYSTSAEVQTDARRLQALFESRMSLMFPEVDFSSARVRSY 2298

Query: 2287 -------------LVSISHNTTCASPKQLPFQPRV------------------------H 2355
                         L SI   +  + P+     P V                         
Sbjct: 2299 APVQPSQAPPVIGLRSIPQASVVSGPRSKINAPVVTGPRGVRRPPASVIAEPAHVETPNP 2358

Query: 2356 KSQEDLNLV-------SELPPTRHAARSSNVVDSD-MREKLNHRENFTRTPKESKVIFDD 2511
            +S   ++LV        E P T+   + S     +  ++K    ++  R+  + K + +D
Sbjct: 2359 RSSTRISLVRHAALSLEEAPVTKQEGKMSKKAGQEKSKDKKAKLKSKVRSSVKDKELIED 2418

Query: 2512 RLQHKERGKGEKAQVTHPGDLVICXXXXXXXXXXXXXSRLINTVPEVSQPN------RAM 2673
             ++  E        + HP DLVI              SR ++++  ++  +      R  
Sbjct: 2419 EVESDE-------GIMHPVDLVI--HKKKRKGREHTGSRTVSSLLVINAEDTRDTTARGF 2469

Query: 2674 PPKDIWHPGQVMQQQAHGWPQFAGMEKNDNNSLQVEKDAQWAKPVKRLRTDTGKRRPSHI 2853
                 W+    +               +  ++LQ          +K+ RTD GKRRPSH+
Sbjct: 2470 NVGPSWNTRAPLPVAPRSRVPTVSPGSSRRSALQPNTKVGAVTVLKKSRTDGGKRRPSHL 2529


>ref|XP_004306759.1| PREDICTED: ATP-dependent helicase BRM-like [Fragaria vesca subsp.
            vesca]
          Length = 2253

 Score =  463 bits (1191), Expect = e-127
 Identities = 226/292 (77%), Positives = 258/292 (88%), Gaps = 1/292 (0%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            WILDRIL+K  R+GHRVLLFSTMTKLLDILEEYLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1336 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDF 1395

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N PGSDCF+FLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREV+VI
Sbjct: 1396 NSPGSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1455

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ IPS++KEDELR+GG +D ED+LAGKDRYMGS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1456 YMEAVVDKIPSHQKEDELRTGGTVDSEDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVI 1515

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL D+ER+QET+HDVPSL EVNRMIARSEEE+E+FD+MDE
Sbjct: 1516 NAGRFDQRTTHEERRMTLETLLHDDERYQETLHDVPSLQEVNRMIARSEEEVELFDQMDE 1575

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLV-APIGTQEEE 873
            E DW  E+ ++ Q+PKWLR  +REVN   +S+SK+  K  L+   IG +  E
Sbjct: 1576 EYDWIEEMTRYDQVPKWLRTSTREVNTVIASLSKRPSKNTLLGGNIGVESSE 1627



 Score =  206 bits (525), Expect = 4e-50
 Identities = 183/574 (31%), Positives = 269/574 (46%), Gaps = 38/574 (6%)
 Frame = +1

Query: 1246 RVGYE---REAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSKTMAEELE 1416
            RVG +    EA SS SS  + +L Q    SP +S QKFGSL+A++ +  + SK + +E+E
Sbjct: 1718 RVGNDLIVEEAGSSGSSSDSRRLMQP--VSPVSS-QKFGSLSALDGRSGSISKRLPDEVE 1774

Query: 1417 EGEIVQSGDSHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXADKTEDKTSS 1596
            EGEIV SGDSHM+ Q S S   +REEG++EQVLQ                 ++ E+K+ S
Sbjct: 1775 EGEIVVSGDSHMDHQHSGSWNHDREEGEDEQVLQPKIKRKRSLRVRPRHTIERPEEKSGS 1834

Query: 1597 EKKVIPPGNMYQQSF--SHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHLGAMSKRRKV 1770
            E + +  G+     F   H +  HT+   +    K +G +S +  D+SD     S +R+ 
Sbjct: 1835 ETQSVQRGDSSLLPFQVDHKSQPHTRADPE---LKTYGESSALKHDQSD----SSSKRRN 1887

Query: 1771 LPTKEDSLLEALPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSVKG 1950
            LPT+      A   SK     K+ R N    S P   +H  E  + K  +T G+S  V  
Sbjct: 1888 LPTR-----RAASASKLHPSAKSGRLNNM--SDPADADHYRENWEGKVAHTSGTSGYVT- 1939

Query: 1951 HMSDIIQKKCKTIYGKLHGAI------------NLSKRNENPGHHRSTASH-IDPRIIEQ 2091
             M DIIQ++CK +  KL   I            +L KR EN G+    A++ ID R I+Q
Sbjct: 1940 KMPDIIQRRCKNVISKLQRRIDKEGPQIVPLLTDLWKRIENSGYTSGLANNIIDLRKIDQ 1999

Query: 2092 RLDRFEYGSVLDFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSS 2271
            R++R EY  V++   DVQ ML++  ++  +  EV+ +AR++  +F   +   F D DF  
Sbjct: 2000 RIERLEYSGVMELVFDVQSMLKSSMQYYGFSHEVRTEARKVHDLFFDILKIAFADTDF-- 2057

Query: 2272 MKTRSLVSISH---NTTCASPKQLPFQPRVHKSQEDLNLVSELPPTRHAARSSNVVDSDM 2442
             + RS +S S     T   SP+    Q + HK    +N V   P  +   +   ++ S+ 
Sbjct: 2058 REARSALSFSSPVVATNALSPRPGVGQTKRHKL---INEVEPDPSPQQKLQRGPIIGSEE 2114

Query: 2443 REKLNHRENFTRTPKESKVIFDDRLQHKERGKGEKAQVTHPGDLVICXXXXXXXXXXXXX 2622
                +H        KES++        +     +   + HPGDLVIC             
Sbjct: 2115 TRVRSHIPQ-----KESRLGSGSGSSREHYQPDDSPLLAHPGDLVICKKKRKDREKTGVK 2169

Query: 2623 SRLINTVPEVSQPN-----RAMPPKDIWHPGQVMQQQAH--GWPQFAGMEKNDNNSLQVE 2781
            +R     P VS P+     R+  P  +    +  QQ +H  GW          N   Q  
Sbjct: 2170 TRNGPAGP-VSPPSMGRGIRSPGPNSVSRETRSTQQASHSQGWA---------NQPSQPA 2219

Query: 2782 KDAQ----------WAKPVKRLRTDTGKRRPSHI 2853
            + AQ          WA PVKRLRTD+GKRRPSH+
Sbjct: 2220 QPAQPANRGAGSVGWANPVKRLRTDSGKRRPSHL 2253


>gb|EXB30861.1| ATP-dependent helicase BRM [Morus notabilis]
          Length = 2263

 Score =  462 bits (1189), Expect = e-127
 Identities = 227/292 (77%), Positives = 260/292 (89%), Gaps = 1/292 (0%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            WILDRIL+K  R+GHRVLLFSTMTKLLDILEEYLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1341 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLIYRRIDGTTSLEDRESAIVDF 1400

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N P SDCF+FLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREV+VI
Sbjct: 1401 NSPNSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1460

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ I S++KEDELRSGG +D ED+LAGKDRYMGS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1461 YMEAVVDKISSHQKEDELRSGGTVDSEDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVI 1520

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL DEER+QETVHDVPSL EVNRMIARSEEE+E+FD+MDE
Sbjct: 1521 NAGRFDQRTTHEERRVTLETLLHDEERYQETVHDVPSLQEVNRMIARSEEEVELFDQMDE 1580

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLV-APIGTQEEE 873
            E+DW  E+  + Q+PKWLR G++EVN+  +++SK+ LK+ L+   IG +  E
Sbjct: 1581 ELDWIEEMSIYEQVPKWLRAGTKEVNSTIAALSKRPLKKMLLGGNIGVESSE 1632



 Score =  212 bits (539), Expect = 9e-52
 Identities = 173/555 (31%), Positives = 271/555 (48%), Gaps = 25/555 (4%)
 Frame = +1

Query: 1264 EAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSKTMAEELEEGEIVQSGD 1443
            EA SS SS  + +L ++   SP +S QKFGSL+A++ +P + SK + +ELEEGEI  SGD
Sbjct: 1736 EAGSSGSSSDSRRLTRI--VSPVSS-QKFGSLSALDGRPGSVSKRLPDELEEGEIAVSGD 1792

Query: 1444 SHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXADKTEDKTSSEKKVIPPGN 1623
            SHM+ QQS S   +REE ++EQVLQ                 ++ EDK+S+E   I  G+
Sbjct: 1793 SHMDHQQSGSWIHDREEAEDEQVLQPKIKRKRSLRIRPRHNVERPEDKSSNETSSIQRGD 1852

Query: 1624 MYQQSFSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHLGAMSKRRKVLPTK---EDSL 1794
                 F   +    ++ G     K +G +S    +++D   + +K R+ LP++     S 
Sbjct: 1853 TSLLPFQVDHKYQAQLRGDP-EMKLYGDSSSYRHEQND---SSTKGRRNLPSRRVANTSK 1908

Query: 1795 LEALPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSVKGHMSDIIQK 1974
            L A P S       ++R N    S+ D  EH  +  + K  ++ G +S+    MSDI+Q+
Sbjct: 1909 LHASPKS-------SSRLNSMSASADDASEHPRDNWEGKVVHSTG-TSAFGTKMSDIVQR 1960

Query: 1975 KCKTIYGKLHGAI------------NLSKRNENPGHHRSTASHI-DPRIIEQRLDRFEYG 2115
            +CK++  KL   I            +L KR EN G+   + S+I D R IEQR++R EY 
Sbjct: 1961 RCKSVIIKLQRRIDKEGSQIVPLLTDLWKRIENSGYTGGSGSNILDLRKIEQRIERLEYN 2020

Query: 2116 SVLDFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSSMKTRSLVS 2295
             V++   DVQ ML +   + ++  EV+ +AR++  +F   +   FPD +F   ++    S
Sbjct: 2021 GVMELIFDVQAMLRSAMNYYSFSHEVRSEARKVHDLFFDILKIAFPDTEFREARSALSFS 2080

Query: 2296 ISHNTTCASPKQLPFQPRVHKSQEDLNLVSELP-PTRHAARSSNVVDSDMREKLNHRENF 2472
               +TT  SP+  P      K Q+ +N V   P P +   +   +  S+  E +  R   
Sbjct: 2081 GPVSTTAPSPRMAPAAQT--KRQKMVNEVEAEPSPLQKPQQRGPMYSSE--ETVRVRGPL 2136

Query: 2473 TRTPKESKVIFDDRLQHKERGKGEKAQVTHPGDLVICXXXXXXXXXXXXXSRLINTVPEV 2652
             +  +      + R Q+++    +  ++THPGDLVIC             +R     P +
Sbjct: 2137 QKESRHGSGSGNSREQYQQ---DDSPRLTHPGDLVICKKKRKDREKSVGKARTGPAGP-I 2192

Query: 2653 SQPNRAM-----PPKDIWHPGQVMQQ---QAHGWPQFAGMEKNDNNSLQVEKDAQWAKPV 2808
            S P+ A       P  +    ++ QQ    + GW   +    N +    V     WA PV
Sbjct: 2193 SPPSMARGIKSPGPGSVARDTRLTQQSTPHSQGWANQSAQPANGSGGSSV----GWANPV 2248

Query: 2809 KRLRTDTGKRRPSHI 2853
            KRLRTD+GKRRPSH+
Sbjct: 2249 KRLRTDSGKRRPSHL 2263


>ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2229

 Score =  458 bits (1179), Expect = e-126
 Identities = 227/292 (77%), Positives = 257/292 (88%), Gaps = 1/292 (0%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            WILDRIL+K  R+GHRVLLFSTMTKLLDILEEYLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1334 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDF 1393

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N P SDCF+FLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREV+VI
Sbjct: 1394 NSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1453

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ I S++KEDELRSGG +D EDELAGKDRYMGS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1454 YMEAVVDKIASHQKEDELRSGGTVDMEDELAGKDRYMGSIESLIRNNIQQYKIDMADEVI 1513

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL DEER+QETVHDVPSL EVNRMIARS+EEIE+FD+MD+
Sbjct: 1514 NAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIARSKEEIELFDQMDD 1573

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLV-APIGTQEEE 873
            E+DW  E+ ++  +PKWLR  +REVN A  ++SK+S K  L+   IG +  E
Sbjct: 1574 ELDWIEEMTRYDHVPKWLRANTREVNAAIGALSKRSSKNTLLGGSIGIESSE 1625



 Score =  203 bits (517), Expect = 3e-49
 Identities = 168/548 (30%), Positives = 259/548 (47%), Gaps = 19/548 (3%)
 Frame = +1

Query: 1264 EAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSKTMAEELEEGEIVQSGD 1443
            EA +S SS  + ++ Q+   SP+ S QKFGSL+A++A+P++ SK M +ELEEGEI  SGD
Sbjct: 1720 EAGTSGSSSDSQRVRQI--VSPSVSSQKFGSLSALDARPSSISKRMTDELEEGEIAVSGD 1777

Query: 1444 SHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXA-DKTEDKTSSEKKVIPPG 1620
            SHM+ QQS S   +R+EG++EQVLQ                A ++ E+K+ SE       
Sbjct: 1778 SHMDHQQSGSWIHDRDEGEDEQVLQKPKIKRKRSLRVRPRHATERPEEKSGSE------- 1830

Query: 1621 NMYQQSFSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHLGAMSKRRKVLPTKEDSLLE 1800
                 S     +DH K   Q  ++ +  +  + N+ + +      K ++ LP++  +   
Sbjct: 1831 ---MASHLAVQADH-KYQAQLRTDPESKLFGDSNASRHEQNTPALKNKRTLPSRRVANTS 1886

Query: 1801 ALPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSVKGHMSDIIQKKC 1980
             L  S      K++R N     S D  +HS E  + K   + GSS+     M++IIQ++C
Sbjct: 1887 KLHGSP-----KSSRLNCMSVPSQDAGDHSRESWEGKPINSSGSSAH-GTKMTEIIQRRC 1940

Query: 1981 KTIYGKLHGAI------------NLSKRNENPGHHRSTASHIDPRIIEQRLDRFEYGSVL 2124
            K +  KL   I            +L KR EN G   S  S +D R I+QR+D+FEY    
Sbjct: 1941 KNVISKLQRRIDKEGHEIVPLLMDLWKRIENSG---SGNSLLDLRKIDQRIDKFEYNGAT 1997

Query: 2125 DFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSSMKTRSLVSISH 2304
            +   DVQ ML++      +  EV+ +AR++  +F + +   FPD DF     RS +S S 
Sbjct: 1998 ELVFDVQFMLKSAMHFYGFSHEVRTEARKVHDLFFEILKIAFPDTDFRD--ARSALSFSS 2055

Query: 2305 NT---TCASPKQLPF-QPRVHKSQEDLNLVSELPPTRHAARSSNVVDSDMREKLNHRENF 2472
                 T  SP+Q    Q + H+   ++   S  P  R   R S     + R K++  +  
Sbjct: 2056 QAAAGTVTSPRQAAVSQSKRHRLINEMETES-YPSQRSLQRGSASSGENNRIKVHLPQ-- 2112

Query: 2473 TRTPKESKVIFDDRLQHKERGKGEKAQVTHPGDLVICXXXXXXXXXXXXXSRLINTVPEV 2652
                +ES+         +E+ + + + + HPG+LV+C              +   T P  
Sbjct: 2113 ----RESRTGSGGGSSTREQQQEDSSLLAHPGELVVCKKRRNDREKSAVKPK---TGPVS 2165

Query: 2653 SQPNRAMPPKDIWHPGQVMQQQAH--GWPQFAGMEKNDNNSLQVEKDAQWAKPVKRLRTD 2826
                R   P  +    ++ QQ +H  GW      + N +          WA PVKRLRTD
Sbjct: 2166 PSSMRTPGPSSVPKEARLTQQGSHAQGWAGQPSQQPNGSGG-----SVGWANPVKRLRTD 2220

Query: 2827 TGKRRPSH 2850
            +GKRRPSH
Sbjct: 2221 SGKRRPSH 2228


>ref|XP_006397786.1| hypothetical protein EUTSA_v10001280mg [Eutrema salsugineum]
            gi|557098859|gb|ESQ39239.1| hypothetical protein
            EUTSA_v10001280mg [Eutrema salsugineum]
          Length = 2163

 Score =  457 bits (1177), Expect = e-125
 Identities = 223/281 (79%), Positives = 250/281 (88%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            WILDRIL+K  R+GHRVLLFSTMTKLLDILEEYLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1282 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDF 1341

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N P +DCF+FLLSIRAAGRGLNLQ+ADTVVIYDPDPNPKNEEQAVARAHRIGQ REV+VI
Sbjct: 1342 NDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVI 1401

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVVE I S++KEDELRSGG ID ED+LAGKDRY+GS+E L+RNNIQQYKIDMADEVI
Sbjct: 1402 YMEAVVEKISSHQKEDELRSGGSIDIEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVI 1461

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL DEER+QETVHDVPSLHEVNRMIARSEEE+E+FD+MDE
Sbjct: 1462 NAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDE 1521

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGL 843
            E DW  E+  H Q+PKWLR  +REVN+A + +SK+  K  L
Sbjct: 1522 EFDWTKEMTSHEQVPKWLRASTREVNSAVADLSKKPSKNML 1562



 Score =  165 bits (417), Expect = 1e-37
 Identities = 157/550 (28%), Positives = 233/550 (42%), Gaps = 20/550 (3%)
 Frame = +1

Query: 1264 EAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSKTMAEELEEGEIVQSGD 1443
            +A SS SS  + +  ++   SP +S QKFGSL+A++ +P + SK + ++LEEGEI  SGD
Sbjct: 1668 DAGSSGSSPESHRSKEM--ASPVSS-QKFGSLSALDTRPGSVSKRLGDDLEEGEIAASGD 1724

Query: 1444 SHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXADKTEDKTSSEKKVIPPGN 1623
            SH++ Q+S S   +REEG+EEQVLQ                A++ +       + +    
Sbjct: 1725 SHIDLQRSGSWAHDREEGEEEQVLQPTIKRKRSIRLRPRQTAERLDGGDMHAAQPLQVDR 1784

Query: 1624 MYQQSFSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHLGAMSKRRKVLPTKEDSLLEA 1803
             Y+         H    G  L             D+SD     S R + LP K+ +    
Sbjct: 1785 SYRSKLRTVVDSH----GSRL-------------DRSDS----SSRLRSLPAKKVANTSK 1823

Query: 1804 LPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSVKGHMSDIIQKKCK 1983
            L  S      K+ R N       D  E + E  D  +      SS+    MS IIQK+CK
Sbjct: 1824 LHVSSP----KSGRLNITQLPVEDNTEAARETWDGTSPI---GSSNAGARMSHIIQKRCK 1876

Query: 1984 TIYGKLHGAI------------NLSKRNENPGHHRSTASHIDPRIIEQRLDRFEYGSVLD 2127
             +  KL   I            NL KR +N        + ++ R I+ R++R EY  V++
Sbjct: 1877 NVISKLQRRIDKEGQQIVPMLTNLWKRIQNGYAAGGVNNLLELREIDLRVERLEYVGVME 1936

Query: 2128 FATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSSMKTRSLVSISHN 2307
             A+DVQ ML    +   +  EV+ +AR++  +F   +  +FPD DF   +     S    
Sbjct: 1937 LASDVQFMLRGAMQFYGFSHEVRSEARKVHNLFFDLLKMSFPDTDFREARNALSFSGPTP 1996

Query: 2308 TTCASPKQLPFQPRVHKSQEDLNLVSELP--PTRHAARSSNVVDSDMREKLNHRENFTRT 2481
            T  ++P          K Q+ +N V   P  P R   R +  +   + +K          
Sbjct: 1997 TLVSTPSPRGAGISQGKRQKPVNEVESEPSSPQRPQQRENTRIRVQIPQK---------- 2046

Query: 2482 PKESKVIFDDRLQHKERGKGEKAQVTHPGDLVICXXXXXXXXXXXXXSRLINTVPEVSQP 2661
                +V       H +    +   + HPG+LVIC             +R   +   VS P
Sbjct: 2047 ----EVKIGGTSSHTD----DSPILAHPGELVICKKKRKDREKSAPRTRTAGSSSPVSPP 2098

Query: 2662 NRAMPPKDIWHP------GQVMQQQAHGWPQFAGMEKNDNNSLQVEKDAQWAKPVKRLRT 2823
              AM  + +  P       +    Q   WP  A    + NNS        WA PVKRLRT
Sbjct: 2099 --AMIGRGLRSPVSGSFTRETRLAQQQRWPNQA---THPNNSGAAGDSVGWANPVKRLRT 2153

Query: 2824 DTGKRRPSHI 2853
            D+GKRRPSH+
Sbjct: 2154 DSGKRRPSHL 2163


>ref|XP_003570802.1| PREDICTED: ATP-dependent helicase BRM-like [Brachypodium distachyon]
          Length = 2157

 Score =  456 bits (1172), Expect = e-125
 Identities = 220/295 (74%), Positives = 262/295 (88%), Gaps = 2/295 (0%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            W LDRIL+K HRSGHRVLLFSTMTKLLDILE+YLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1260 WNLDRILIKLHRSGHRVLLFSTMTKLLDILEDYLQWRQLAYRRIDGTTSLEDRESAIVDF 1319

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N+PGS+CF+FLLSIRAAGRGLNLQSADTVVIYDPDPNP+NEEQAVARAHRIGQ REV+VI
Sbjct: 1320 NRPGSECFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPQNEEQAVARAHRIGQTREVKVI 1379

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ I SY+KEDELR+GG  D ED+L GKDRYMGS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1380 YMEAVVDNISSYQKEDELRNGGSGDLEDDLVGKDRYMGSIESLIRNNIQQYKIDMADEVI 1439

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL DEER+QET+HDVPSL EVNRMIAR+E+E+E+FD+MDE
Sbjct: 1440 NAGRFDQRTTHEERRMTLETLLHDEERYQETLHDVPSLQEVNRMIARTEDEVELFDQMDE 1499

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKR--GLVAPIGTQEEEDK 879
            E DW G+++KH+Q+PKWLRV S E+++  +S++K+ ++   G+  P  T++ E +
Sbjct: 1500 EFDWTGDMMKHNQVPKWLRVSSTELDSVVASLTKKPMRNASGVSVPDTTEKLEKR 1554



 Score =  177 bits (450), Expect = 2e-41
 Identities = 166/584 (28%), Positives = 248/584 (42%), Gaps = 46/584 (7%)
 Frame = +1

Query: 1240 QSRVGYEREAESSESSFHNAKLNQVHVTSPA-ASIQKFGSLAAIEAKPATHSKTMAEELE 1416
            Q  VG  +  +S E+    +      +  PA +S++K  SL+A++A+P T SK   ++LE
Sbjct: 1627 QHGVGRGKAHKSEEAGSTGSSSGSRRLPPPAPSSLKKLKSLSALDARPGTFSKRTTDDLE 1686

Query: 1417 EGEIVQSGDSHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXADKTEDKTSS 1596
            EGEI  SGDSHM+ QQS S   ER++G++EQVLQ                A+K ED++  
Sbjct: 1687 EGEIALSGDSHMDLQQSGSWNHERDDGEDEQVLQPKIKRKRSIRIRPKPNAEKQEDRSGV 1746

Query: 1597 E--------KKVIPPGNMYQQSFSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHLGAM 1752
            +        +   P    Y          H  V              +  S + D +  +
Sbjct: 1747 DVTFSQRGARLAFPGDGDYDSQLKSEQEVHAFV--------------DPTSRQQDTIHPI 1792

Query: 1753 SKRRKVLPTKEDSLLEALPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGS 1932
             K+++ +P++     +A P S+   + K+   +G  E+S    E S E    K       
Sbjct: 1793 VKQKRNMPSR-----KASPASR---VGKSTHLSGSGEAS---AEQSKENWSKKKVIDSAG 1841

Query: 1933 SSSVKGHMSDIIQKKCKTIYGKLHGAINLS------------KRNENPGHHRSTASHIDP 2076
              S    MSD +Q+KCK +  KL   I+              +RNEN        +++D 
Sbjct: 1842 PDSGGTKMSDSMQRKCKNVISKLWRRIDKEGHKMIPNIASWWRRNENSSSKGVAGNNLDL 1901

Query: 2077 RIIEQRLDRFEYGSVLDFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPD 2256
            + IE R+D FEYG V +F  D+Q ML+++ +H NY IEV+++A  L T+F   +   FPD
Sbjct: 1902 QKIELRVDGFEYGGVTEFIADMQQMLKSVVQHFNYRIEVRVEAETLSTLFFNIMKIAFPD 1961

Query: 2257 VDFSSMKTRSLVSISHNTTCASPKQLPFQPRVHKSQEDLNLVSELPPTRHAARSSNVVDS 2436
             DF+  K  S +S S+    AS    P         +  +  SE    +H + S      
Sbjct: 1962 SDFTEAK--STMSFSNPGGGASSIAAPSAKHSASGNKRRSTTSE--AEQHGSGSG----- 2012

Query: 2437 DMREKLNHRENFTRTPKESKVIFDDRLQHKERGKGEKAQ-------VTHPGDLVICXXXX 2595
                K N R +    P  +K   D R      G G + Q       + HP DL I     
Sbjct: 2013 ----KHNQRPSVGEAPSRAKSERDSR----HSGPGSRDQLLDSAGLLPHPSDLFI----- 2059

Query: 2596 XXXXXXXXXSRLINTVPEVSQPNRAMP--PKDIWHPGQV----------------MQQQA 2721
                      R   ++   S   R  P  P +    G V                 QQ  
Sbjct: 2060 ---VKKKRQERARTSIGSPSSSGRVGPLSPTNTGRMGPVPSPRGARTPFQRDPHPSQQSL 2116

Query: 2722 HGWPQFAGMEKNDNNSLQVEKDAQWAKPVKRLRTDTGKRRPSHI 2853
             GW   A  ++  ++S  +  D QWAKP KR RTD+GKRRPSH+
Sbjct: 2117 PGWG--AHSDRGGSSSPGI-GDIQWAKPAKRQRTDSGKRRPSHM 2157


>dbj|BAD07923.1| SNF2 domain/helicase domain-containing protein-like [Oryza sativa
            Japonica Group] gi|41052776|dbj|BAD07645.1| SNF2
            domain/helicase domain-containing protein-like [Oryza
            sativa Japonica Group] gi|222622037|gb|EEE56169.1|
            hypothetical protein OsJ_05089 [Oryza sativa Japonica
            Group]
          Length = 2200

 Score =  455 bits (1170), Expect = e-125
 Identities = 222/291 (76%), Positives = 254/291 (87%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            W LDRIL+K HRSGHRVLLFSTMTKLLDILEEYLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1296 WNLDRILIKLHRSGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDF 1355

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N+P SDCF+FLLSIRAAGRGLNLQSADTVVIYDPDPNP+NEEQAVARAHRIGQ R+V+VI
Sbjct: 1356 NRPNSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPQNEEQAVARAHRIGQTRDVKVI 1415

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ I SY+KEDELR+GG  D ED+LAGKDRYMGS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1416 YMEAVVDNISSYQKEDELRNGGSGDLEDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVI 1475

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL DEER+QETVHDVPSL +VNRMIAR+EEE+E+FD+MDE
Sbjct: 1476 NAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQQVNRMIARTEEEVELFDQMDE 1535

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLVAPIGTQEEE 873
            E DW G+++KH+Q PKWLRV S E++   +S+SK+ L+      I     E
Sbjct: 1536 EFDWTGDMMKHNQAPKWLRVSSTELDAVVASLSKKPLRNMAAGGISLDTNE 1586



 Score =  168 bits (426), Expect = 1e-38
 Identities = 163/564 (28%), Positives = 251/564 (44%), Gaps = 34/564 (6%)
 Frame = +1

Query: 1264 EAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSKTMAEELEEGEIVQSGD 1443
            EA S+ SS    +L      +P++S +K  SL+A++++P   SK  A++LEEGEI  SGD
Sbjct: 1680 EAGSTGSSSGGRRLPP---PAPSSSSKKLRSLSALDSRPGALSKRTADDLEEGEIALSGD 1736

Query: 1444 SHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXADKTEDKTSSEKKVIPPGN 1623
            SH++ QQS S   ER++G++EQV+Q                A+K +D++         G 
Sbjct: 1737 SHLDLQQSGSWNHERDDGEDEQVVQPKIKRKRSIRIRPRPNAEKLDDRSGD-------GT 1789

Query: 1624 MYQQSFSHSNSDHTKVVGQG---LSNKDHGMTSEMNSDKSDHLGAMSKRRKVLPTKEDSL 1794
            + Q+        H    G G      K     ++  S + D +    K+++ +P++    
Sbjct: 1790 VPQRGV------HLAFQGDGDYDSQFKSEQAFADPASRQQDTVHRTVKQKRNMPSR---- 1839

Query: 1795 LEALPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSVKGHMSDIIQK 1974
             +A P +K     K  + +G  E S    EHS E    K   + G +SS    MSD +Q+
Sbjct: 1840 -KAPPATKAG---KMTQLSGSGEGS---AEHSKENWSNKVIESAGPNSS-GTKMSDSMQR 1891

Query: 1975 KCKTIYGKLHGAI---------NLS---KRNENPGHHRSTASHIDPRIIEQRLDRFEYGS 2118
            KCK +  KL   I         N+S   +RNEN       +S +D + IEQR+D FEYG 
Sbjct: 1892 KCKNVINKLWRRIDKEGHQIIPNISSWWRRNENSSFKGLASSTLDLQKIEQRVDGFEYGG 1951

Query: 2119 VLDFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSSMKTRSLVSI 2298
            V +F  D+Q ML+++ +H +Y  EV+++A  L  +F   +   FPD DF   K    +S 
Sbjct: 1952 VNEFIADMQQMLKSVVQHFSYRHEVRVEAETLHNLFFNIMKIAFPDSDFREAK--GAMSF 2009

Query: 2299 SHNTTCASPKQLPFQPRVHKSQEDLNLVSELPPTRHAARSSNVVDSDMREKLNHRENFTR 2478
            S+    AS        +    Q+  +  SE    +H + +S         +++ R + ++
Sbjct: 2010 SNPGGGASGSAAQSTKQSASGQKRRSSTSE--AEQHGSSTSRHNQHAPVGEVSGRAHTSK 2067

Query: 2479 TPKESKVIFDDRLQHKERGKGEKAQVT-------HPGDLVICXXXXXXXXXXXXXSRLIN 2637
            + K+S          +  G G + Q T       HP D+ I              S    
Sbjct: 2068 SEKDS----------RHSGPGSREQFTDSAGLFRHPTDMFIVKKKRDRRPSLGSPSSSGR 2117

Query: 2638 TVP----------EVSQPNRAMPP-KDIWHPGQVMQQQAHGWPQFAGMEKNDNNSLQVE- 2781
            T P              P  A  P +   HP Q     A GW   +  + +   S     
Sbjct: 2118 TGPLSPTNAGRMGPAPSPRGARTPFQRDPHPSQQSMHSA-GWGAHSVQQSDRGGSSSPGI 2176

Query: 2782 KDAQWAKPVKRLRTDTGKRRPSHI 2853
             D QWAKP KR RTD+GKRRPSH+
Sbjct: 2177 GDIQWAKPTKRSRTDSGKRRPSHM 2200


>gb|EEC72341.1| hypothetical protein OsI_05562 [Oryza sativa Indica Group]
          Length = 2184

 Score =  455 bits (1170), Expect = e-125
 Identities = 222/291 (76%), Positives = 254/291 (87%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            W LDRIL+K HRSGHRVLLFSTMTKLLDILEEYLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1296 WNLDRILIKLHRSGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDF 1355

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N+P SDCF+FLLSIRAAGRGLNLQSADTVVIYDPDPNP+NEEQAVARAHRIGQ R+V+VI
Sbjct: 1356 NRPNSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPQNEEQAVARAHRIGQTRDVKVI 1415

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ I SY+KEDELR+GG  D ED+LAGKDRYMGS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1416 YMEAVVDNISSYQKEDELRNGGSGDLEDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVI 1475

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL DEER+QETVHDVPSL +VNRMIAR+EEE+E+FD+MDE
Sbjct: 1476 NAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQQVNRMIARTEEEVELFDQMDE 1535

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLVAPIGTQEEE 873
            E DW G+++KH+Q PKWLRV S E++   +S+SK+ L+      I     E
Sbjct: 1536 EFDWTGDMMKHNQAPKWLRVSSTELDAVVASLSKKPLRNMAAGGISLDTNE 1586



 Score =  152 bits (385), Expect = 7e-34
 Identities = 156/557 (28%), Positives = 241/557 (43%), Gaps = 36/557 (6%)
 Frame = +1

Query: 1291 HNAKLNQVHVTSPAASI-QKFGSLAAIEAKPATHSKTMA-EELEEGEIVQSGDSHMECQQ 1464
            H     + H +  A S     G+    +  P++ SK +A ++LEEGEI  SGDSH++ QQ
Sbjct: 1668 HGMGRRKAHRSEEAGSTGSSSGARRLPQPAPSSSSKKIAADDLEEGEIALSGDSHLDLQQ 1727

Query: 1465 SESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXADKTEDKTSSEKKVIPPGNMYQQSFS 1644
            S S   ER++G++EQV+Q                A+K +D++         G + Q+   
Sbjct: 1728 SGSWNHERDDGEDEQVVQPKIKRKRSIRIRPRPNAEKLDDRSGD-------GTVPQRGV- 1779

Query: 1645 HSNSDHTKVVGQGLSN---KDHGMTSEMNSDKSDHLGAMSKRRKVLPTKEDSLLEALPYS 1815
                 H    G G  +   K     ++  S + D +    K+++ +P+++     A P +
Sbjct: 1780 -----HLAFQGDGDYDSQFKSEQAFADPASRQQDTVHRTVKQKRNMPSRK-----APPAT 1829

Query: 1816 KQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSVKGHMSDIIQKKCKTIYG 1995
            K     K  + +G  E S    EHS E    K   + G +SS    MSD +Q+KCK +  
Sbjct: 1830 KAG---KMTQLSGSGEGSA---EHSKENWSNKVIESAGPNSSGT-KMSDSMQRKCKNVIN 1882

Query: 1996 KLHGAI---------NLS---KRNENPGHHRSTASHIDPRIIEQRLDRFEYGSVLDFATD 2139
            KL   I         N+S   +RNEN       +S +D + IEQR+D FEYG V +F  D
Sbjct: 1883 KLWRRIDKEGHQIIPNISSWWRRNENSSFKGLASSTLDLQKIEQRVDGFEYGGVNEFIAD 1942

Query: 2140 VQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSSMKTRSLVSISHNTTCA 2319
            +Q ML+++ +H +Y  EV+++A  L  +F   +   FPD DF   K    +S S+    A
Sbjct: 1943 MQQMLKSVVQHFSYRHEVRVEAETLHNLFFNIMKIAFPDSDFREAK--GAMSFSNPGGGA 2000

Query: 2320 SPKQLPFQPRVHKSQEDLNLVSELPPTRHAARSSNVVDSDMREKLNHRENFTRTPKESKV 2499
            S        +    Q+  +  SE    +H + +S         +++ R + +++ K+S  
Sbjct: 2001 SGSAAQSTKQSASGQKRRSSTSE--AEQHGSSTSRHNQHAPVGEVSGRAHTSKSEKDS-- 2056

Query: 2500 IFDDRLQHKERGKGEKAQVT-------HPGDLVICXXXXXXXXXXXXXSRLINTVP---- 2646
                    +  G G + Q T       HP D+ I              S    T P    
Sbjct: 2057 --------RHSGPGSREQFTDSAGLFRHPTDMFIVKKKRDRRPSLGSPSSSGRTGPLSPT 2108

Query: 2647 ------EVSQPNRAMPP-KDIWHPGQVMQQQAHGWPQFAGMEKNDNNSLQVE-KDAQWAK 2802
                      P  A  P +   HP Q     A GW   +  + +   S      D QWAK
Sbjct: 2109 NAGRMGPAPSPRGARTPFQRDPHPSQQSMHSA-GWGAHSVQQSDRGGSSSPGIGDIQWAK 2167

Query: 2803 PVKRLRTDTGKRRPSHI 2853
            P KR RTD+GKRRPSH+
Sbjct: 2168 PTKRSRTDSGKRRPSHM 2184


>ref|XP_004956998.1| PREDICTED: ATP-dependent helicase BRM-like isoform X2 [Setaria
            italica]
          Length = 2126

 Score =  454 bits (1169), Expect = e-125
 Identities = 217/278 (78%), Positives = 252/278 (90%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            W LDRIL+K H++GHRVLLFSTMTKLLDI+E+YLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1251 WNLDRILIKLHKAGHRVLLFSTMTKLLDIMEDYLQWRRLVYRRIDGTTSLEDRESAIVDF 1310

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N+PGSDCF+FLLSIRAAGRGLNLQSADTVVIYDPDPNP+NEEQAVARAHRIGQ REV+VI
Sbjct: 1311 NRPGSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPQNEEQAVARAHRIGQTREVKVI 1370

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ I SY+KEDELR+GG  D ED+LAGKDRYMGS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1371 YMEAVVDNISSYQKEDELRNGGSGDLEDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVI 1430

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL D+ER+QETVHDVPSL EVNRMIAR+E E+E+FD+MDE
Sbjct: 1431 NAGRFDQRTTHEERRMTLETLLHDDERYQETVHDVPSLQEVNRMIARTEREVELFDQMDE 1490

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLK 834
            + DW G+++KHHQ+PKWLR  S EV+   +S+SK+ L+
Sbjct: 1491 DFDWTGDMMKHHQVPKWLRASSTEVDAVVASLSKKPLR 1528



 Score =  160 bits (404), Expect = 4e-36
 Identities = 161/561 (28%), Positives = 233/561 (41%), Gaps = 31/561 (5%)
 Frame = +1

Query: 1264 EAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSKTMAEELEEGEIVQSGD 1443
            EA S+ SS  + +L      +P++S +K  SL+A++A+P + S+   ++LEEGEI  SGD
Sbjct: 1635 EAGSTGSSSGSRRLPP---PAPSSSSKKLRSLSALDARPGSLSRRTLDDLEEGEIAMSGD 1691

Query: 1444 SHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXADKTEDKTSSEKKVIPPGN 1623
            SHM+ QQS S   ER++G++E VLQ                A+K ED++  E  V P   
Sbjct: 1692 SHMDLQQSGSWNHERDDGEDEHVLQPKIKRKRSIRIRPRLNAEKQEDRSGGEA-VFPQRA 1750

Query: 1624 MYQQSFSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHLGAMSKRRKVLPTKEDSLLEA 1803
              QQ   H                                  M K+++ +P+++ S    
Sbjct: 1751 ARQQDAVHP---------------------------------MVKQKRNMPSRKVSPAP- 1776

Query: 1804 LPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSVKG-HMSDIIQKKC 1980
                      +  +      S     E S E   +KA     S+   +G  MSD +Q+KC
Sbjct: 1777 ----------RTGKSTYLCGSGEGSVERSKENWSSKAM--DSSTPEFRGTKMSDSMQRKC 1824

Query: 1981 KTIYGKLHGAI---------NLS---KRNENPGHHRSTASHIDPRIIEQRLDRFEYGSVL 2124
            K +  KL   I         N+S   +RNEN      + S +D + IEQR+D FEY SV 
Sbjct: 1825 KNVISKLWRRIDKEGHQIIPNISSWWRRNENSSFRGPSCSTLDLQKIEQRVDGFEYSSVT 1884

Query: 2125 DFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSSMKTRSLVSISH 2304
            +F  D+Q ML+++ +H +Y  EV+++A  L  +F   +   FPD DFS  K  + +S S+
Sbjct: 1885 EFIGDMQQMLKSVVQHFSYRHEVQIEAETLHNLFFNIMNIAFPDSDFSEAK--NAMSFSN 1942

Query: 2305 NTTCASPKQLPFQPRVHKSQEDLNLVSELPPTRHAARSSNVVDSDMREKLNHRENFTRTP 2484
                AS    P               + L   R A+ S          + N        P
Sbjct: 1943 PGRAASGTAGPSTKH-----------AALGHKRRASTSEAEQHGSGHIRHNQSSEVPSRP 1991

Query: 2485 KESKVIFDDRLQHKERGKGEK----AQVTHPGDLVICXXXXXXXXXXXXXS--------R 2628
              S+   D R  H   G  ++    A + HP D+ I              S        R
Sbjct: 1992 HSSRSEIDSR--HSGSGSRDQLPDGAGLLHPSDMFIVKKKRQERARSSIGSPSSSGRAGR 2049

Query: 2629 LINTVP----EVSQPNRAMPP--KDIWHPGQVMQQQAHGWPQFAGMEKNDNNSLQVEKDA 2790
            L  T P     V  P  A  P  +D  HP    Q   H        +   ++S     D 
Sbjct: 2050 LSPTNPVRLGSVPSPRGARTPFQRDA-HPS---QHSVHSTGWIVHSDHGGSSSAPGIGDI 2105

Query: 2791 QWAKPVKRLRTDTGKRRPSHI 2853
            QWAKP KR RTD GKRRPSH+
Sbjct: 2106 QWAKPSKRQRTDAGKRRPSHL 2126


>ref|XP_004956997.1| PREDICTED: ATP-dependent helicase BRM-like isoform X1 [Setaria
            italica]
          Length = 2154

 Score =  454 bits (1169), Expect = e-125
 Identities = 217/278 (78%), Positives = 252/278 (90%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            W LDRIL+K H++GHRVLLFSTMTKLLDI+E+YLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1251 WNLDRILIKLHKAGHRVLLFSTMTKLLDIMEDYLQWRRLVYRRIDGTTSLEDRESAIVDF 1310

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N+PGSDCF+FLLSIRAAGRGLNLQSADTVVIYDPDPNP+NEEQAVARAHRIGQ REV+VI
Sbjct: 1311 NRPGSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPQNEEQAVARAHRIGQTREVKVI 1370

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ I SY+KEDELR+GG  D ED+LAGKDRYMGS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1371 YMEAVVDNISSYQKEDELRNGGSGDLEDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVI 1430

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL D+ER+QETVHDVPSL EVNRMIAR+E E+E+FD+MDE
Sbjct: 1431 NAGRFDQRTTHEERRMTLETLLHDDERYQETVHDVPSLQEVNRMIARTEREVELFDQMDE 1490

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLK 834
            + DW G+++KHHQ+PKWLR  S EV+   +S+SK+ L+
Sbjct: 1491 DFDWTGDMMKHHQVPKWLRASSTEVDAVVASLSKKPLR 1528



 Score =  171 bits (432), Expect = 2e-39
 Identities = 164/561 (29%), Positives = 244/561 (43%), Gaps = 31/561 (5%)
 Frame = +1

Query: 1264 EAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSKTMAEELEEGEIVQSGD 1443
            EA S+ SS  + +L      +P++S +K  SL+A++A+P + S+   ++LEEGEI  SGD
Sbjct: 1635 EAGSTGSSSGSRRLPP---PAPSSSSKKLRSLSALDARPGSLSRRTLDDLEEGEIAMSGD 1691

Query: 1444 SHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXADKTEDKTSSEKKVIPPGN 1623
            SHM+ QQS S   ER++G++E VLQ                A+K ED++  E  V P   
Sbjct: 1692 SHMDLQQSGSWNHERDDGEDEHVLQPKIKRKRSIRIRPRLNAEKQEDRSGGE-AVFP--- 1747

Query: 1624 MYQQSFSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHLGAMSKRRKVLPTKEDSLLEA 1803
              Q+   H+         Q  S+ D    ++  + + D +  M K+++ +P+++ S    
Sbjct: 1748 --QRGTHHAFQGSDDYNSQFKSDLDSHAFADPAARQQDAVHPMVKQKRNMPSRKVSPAP- 1804

Query: 1804 LPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSVKG-HMSDIIQKKC 1980
                      +  +      S     E S E   +KA     S+   +G  MSD +Q+KC
Sbjct: 1805 ----------RTGKSTYLCGSGEGSVERSKENWSSKAM--DSSTPEFRGTKMSDSMQRKC 1852

Query: 1981 KTIYGKLHGAI---------NLS---KRNENPGHHRSTASHIDPRIIEQRLDRFEYGSVL 2124
            K +  KL   I         N+S   +RNEN      + S +D + IEQR+D FEY SV 
Sbjct: 1853 KNVISKLWRRIDKEGHQIIPNISSWWRRNENSSFRGPSCSTLDLQKIEQRVDGFEYSSVT 1912

Query: 2125 DFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSSMKTRSLVSISH 2304
            +F  D+Q ML+++ +H +Y  EV+++A  L  +F   +   FPD DFS  K  + +S S+
Sbjct: 1913 EFIGDMQQMLKSVVQHFSYRHEVQIEAETLHNLFFNIMNIAFPDSDFSEAK--NAMSFSN 1970

Query: 2305 NTTCASPKQLPFQPRVHKSQEDLNLVSELPPTRHAARSSNVVDSDMREKLNHRENFTRTP 2484
                AS    P               + L   R A+ S          + N        P
Sbjct: 1971 PGRAASGTAGPSTKH-----------AALGHKRRASTSEAEQHGSGHIRHNQSSEVPSRP 2019

Query: 2485 KESKVIFDDRLQHKERGKGEK----AQVTHPGDLVICXXXXXXXXXXXXXS--------R 2628
              S+   D R  H   G  ++    A + HP D+ I              S        R
Sbjct: 2020 HSSRSEIDSR--HSGSGSRDQLPDGAGLLHPSDMFIVKKKRQERARSSIGSPSSSGRAGR 2077

Query: 2629 LINTVP----EVSQPNRAMPP--KDIWHPGQVMQQQAHGWPQFAGMEKNDNNSLQVEKDA 2790
            L  T P     V  P  A  P  +D  HP    Q   H        +   ++S     D 
Sbjct: 2078 LSPTNPVRLGSVPSPRGARTPFQRDA-HPS---QHSVHSTGWIVHSDHGGSSSAPGIGDI 2133

Query: 2791 QWAKPVKRLRTDTGKRRPSHI 2853
            QWAKP KR RTD GKRRPSH+
Sbjct: 2134 QWAKPSKRQRTDAGKRRPSHL 2154


>ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score =  454 bits (1169), Expect = e-125
 Identities = 218/282 (77%), Positives = 254/282 (90%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            WILDRIL+K  R+GHRVLLFSTMTKLLD+LE+YL WR L YRRIDGTTSL+DRE+AI +F
Sbjct: 1322 WILDRILIKLQRTGHRVLLFSTMTKLLDLLEDYLNWRRLVYRRIDGTTSLDDRESAIMDF 1381

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N P SDCF+FLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI
Sbjct: 1382 NSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 1441

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ I S++KEDE+RSGG +D EDEL GKDRY+GS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1442 YMEAVVDKISSHQKEDEVRSGGTVDMEDELVGKDRYIGSIESLIRNNIQQYKIDMADEVI 1501

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL DEER+QE VHDVPSL EVNRMIARSEEE+E+FD+MDE
Sbjct: 1502 NAGRFDQRTTHEERRLTLETLLHDEERYQENVHDVPSLQEVNRMIARSEEEVELFDQMDE 1561

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLV 846
            E+DWP ++++H ++P+WLR  +REVN A +++SK+ LK  L+
Sbjct: 1562 ELDWPEDVMQHDEVPEWLRANTREVNAAIAALSKRPLKNTLL 1603



 Score =  187 bits (474), Expect = 3e-44
 Identities = 170/554 (30%), Positives = 246/554 (44%), Gaps = 24/554 (4%)
 Frame = +1

Query: 1264 EAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSKTMAEELEEGEIVQSGD 1443
            EA SS SS  + +L +    SP+ S +KFGSL+A++++P + SK M +ELEEGEI  SGD
Sbjct: 1703 EAGSSGSSSDSQRLTKT--VSPSVSSKKFGSLSALDSRPGSISKIMGDELEEGEIAVSGD 1760

Query: 1444 SHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXA-DKTEDKTSSEKKVIPPG 1620
            SHM+ QQS S   +R+EG++EQVLQ                A ++ EDK+ +E   +  G
Sbjct: 1761 SHMDHQQSGSWIHDRDEGEDEQVLQQPKIKRKRSLRVRPRHAMERLEDKSGNEIISLQRG 1820

Query: 1621 NM-----YQQSFSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHLGAMSKRRKVLPTKE 1785
                   Y+          +K  G   ++K     S + S K+         RKV  T  
Sbjct: 1821 ESSLLADYKYQIQTRIDPESKSFGDSNASKRDKNESSLTSLKNKQ---KLSSRKVANT-- 1875

Query: 1786 DSLLEALPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSVKGHMSDI 1965
             S L   P        K+NR N     S D  EH  E  + K     GSS+      ++I
Sbjct: 1876 -SKLHGSP--------KSNRLNCTSAPSEDGNEHPRESWEGKHLNPNGSSAH-GTKTTEI 1925

Query: 1966 IQKKCKTIYGKLHGAI------------NLSKRNENPGHHRSTA-SHIDPRIIEQRLDRF 2106
            IQ+ CK +  KL   I            +L KR EN GH   +  S +D   I+QR+DR 
Sbjct: 1926 IQRGCKNVISKLQRRIDKEGHQIVPLLTDLWKRIENSGHAGGSGNSLLDLHKIDQRIDRM 1985

Query: 2107 EYGSVLDFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSSMKTRS 2286
            +Y  V++   DVQ ML        Y  EV+ +AR++  +F   +   FPD DF  ++ R 
Sbjct: 1986 DYSGVMELVFDVQFMLRGAMHFYGYSYEVRTEARKVHDLFFDILKIAFPDTDF--VEARG 2043

Query: 2287 LVSISH----NTTCASPKQLPFQP-RVHKSQEDLNLVSELPPTRHAARSSNVVDSDMREK 2451
             +S S      T  +SP+Q+   P + H+   D       P  + +   S     + R K
Sbjct: 2044 ALSFSSQVPAGTAASSPRQVTVGPSKRHRVTNDAE-TDPCPSQKPSQSGSTTNGENTRFK 2102

Query: 2452 LNHRENFTRTPKESKVIFDDRLQHKERGKGEKAQVTHPGDLVICXXXXXXXXXXXXXSRL 2631
             +  +  +RT   S          ++  +     + HPG LV+C              R 
Sbjct: 2103 GHLPQKNSRTGSGS--------AREQPQQDNPPLLAHPGQLVVCKKKRNERDKSLGKGRT 2154

Query: 2632 INTVPEVSQPNRAMPPKDIWHPGQVMQQQAHGWPQFAGMEKNDNNSLQVEKDAQWAKPVK 2811
             +T P VS P+ A     I  PG     +     Q   + +   +S        WA PVK
Sbjct: 2155 GSTGP-VSPPSAA-----IRSPGSGSTPKDARLAQQGRVSQPSQHSNGSAGSVGWANPVK 2208

Query: 2812 RLRTDTGKRRPSHI 2853
            RLRTD+GKRRPSH+
Sbjct: 2209 RLRTDSGKRRPSHM 2222


>ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2226

 Score =  454 bits (1168), Expect = e-124
 Identities = 225/292 (77%), Positives = 255/292 (87%), Gaps = 1/292 (0%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            WILDRIL+K  R+GHRVLLFSTMTKLLDILEEYLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1332 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDF 1391

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N P SDCF+FLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQ REV+VI
Sbjct: 1392 NSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVI 1451

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ I S++KEDELRSGG +D EDELAGKDRYMGS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1452 YMEAVVDKIASHQKEDELRSGGTVDMEDELAGKDRYMGSIESLIRNNIQQYKIDMADEVI 1511

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL DEER+QETVHDVPSL EVNRMIARS+EEIE+FD+MD+
Sbjct: 1512 NAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIARSKEEIELFDQMDD 1571

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLV-APIGTQEEE 873
            E+DW  E+ ++  +PKWLR  +REVN A  ++SK+  K  L+   IG +  E
Sbjct: 1572 ELDWIEEMTRYDHVPKWLRANTREVNAAIGALSKRPSKNTLLGGSIGMESSE 1623



 Score =  207 bits (527), Expect = 2e-50
 Identities = 169/544 (31%), Positives = 257/544 (47%), Gaps = 15/544 (2%)
 Frame = +1

Query: 1264 EAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSKTMAEELEEGEIVQSGD 1443
            EA SS SS  + ++ Q+   SP+ S QKFGSL+A++A+P++ SK M +ELEEGEI  SGD
Sbjct: 1717 EAGSSGSSSDSQRVRQI--VSPSVSSQKFGSLSALDARPSSISKRMTDELEEGEIAVSGD 1774

Query: 1444 SHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXA-DKTEDKTSSEKKVIPPG 1620
            SHM+ Q S S   +R+EG++EQVLQ                A ++ E+K+ SE       
Sbjct: 1775 SHMDHQLSGSWIHDRDEGEDEQVLQKPKIKRKRSLRVRPRHATERPEEKSGSE------- 1827

Query: 1621 NMYQQSFSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHLGAMSKRRKVLPTKEDSLLE 1800
                 S     +DH K   Q  ++ +  +  + N+ + +      K ++ LP++  +   
Sbjct: 1828 ---MASHLAVQADH-KYQAQLRTDPESKLFGDSNASRHEQNSPSLKNKRTLPSRRVANTS 1883

Query: 1801 ALPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSVKGHMSDIIQKKC 1980
             L  S      K++R N     S D  EHS E  + K   + GSS+     M++IIQ++C
Sbjct: 1884 KLHGSP-----KSSRLNCMSVPSQDGGEHSRESWEGKPINSSGSSAH-GTKMTEIIQRRC 1937

Query: 1981 KTIYGKLHGAI------------NLSKRNENPGHHRSTASHIDPRIIEQRLDRFEYGSVL 2124
            K +  KL   I            +L KR EN G   S  S +D R I+QR+D+FEY    
Sbjct: 1938 KNVISKLQRRIDKEGHEIVPLLTDLWKRIENSG---SVNSLLDLRKIDQRIDKFEYNGAT 1994

Query: 2125 DFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSSMKTRSLVSISH 2304
            +   DVQ ML++      +  EV+ +AR++  +F   +   FPD DF     RS +S S 
Sbjct: 1995 ELVFDVQFMLKSAMHFYGFSHEVRTEARKVHDLFFDILKIAFPDTDFRD--ARSALSFSS 2052

Query: 2305 NTTCASPKQLPFQPRVHKSQEDLNLVSELPPTRHAARSSNVVDSDMREKLNHRENFTRTP 2484
              T AS    P Q  V +S+    L++E+    +A + S +         N+R       
Sbjct: 2053 QAT-ASTVTSPRQVAVGQSKRH-KLINEMETESYALQRS-LQRGSASSSENNRIKVHLPQ 2109

Query: 2485 KESKVIFDDRLQHKERGKGEKAQVTHPGDLVICXXXXXXXXXXXXXSRLINTVPEVSQPN 2664
            +ES+         +E+ + + + + HPG+LV+C              +   T P      
Sbjct: 2110 RESRTGSGGGSSTREQQQDDSSLLAHPGELVVCKKRRNDREKSVVKPK---TGPASPSSM 2166

Query: 2665 RAMPPKDIWHPGQVMQQQAH--GWPQFAGMEKNDNNSLQVEKDAQWAKPVKRLRTDTGKR 2838
            R   P  +    ++ QQ +H  GW      + N +          WA PVKRLRTD+GKR
Sbjct: 2167 RTPGPSSVTKDARLSQQGSHAQGWAGQPSQQPNGSGG-----PVAWANPVKRLRTDSGKR 2221

Query: 2839 RPSH 2850
            RPSH
Sbjct: 2222 RPSH 2225


>ref|XP_002453160.1| hypothetical protein SORBIDRAFT_04g001010 [Sorghum bicolor]
            gi|241932991|gb|EES06136.1| hypothetical protein
            SORBIDRAFT_04g001010 [Sorghum bicolor]
          Length = 2166

 Score =  454 bits (1168), Expect = e-124
 Identities = 222/296 (75%), Positives = 260/296 (87%), Gaps = 3/296 (1%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            W LDRIL+K H++GHRVLLFSTMTKLLDI+E+YLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1294 WNLDRILIKLHKAGHRVLLFSTMTKLLDIMEDYLQWRRLVYRRIDGTTSLEDRESAIVDF 1353

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N+PGSDCF+FLLSIRAAGRGLNLQSADTVVIYDPDPNP+NEEQAVARAHRIGQ REV+VI
Sbjct: 1354 NRPGSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPQNEEQAVARAHRIGQTREVKVI 1413

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ I SY+KEDELR+GG  D ED+LAGKDRYMGS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1414 YMEAVVDNISSYQKEDELRNGGSADLEDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVI 1473

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL DEER+Q++VHDVPSL EVNRMIAR+E E+E+FD+MDE
Sbjct: 1474 NAGRFDQRTTHEERRMTLETLLHDEERYQDSVHDVPSLQEVNRMIARTESEVELFDQMDE 1533

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSK---QSLKRGLVAPIGTQEEEDK 879
            + DW G++ KHHQIPKWLRV S EV+   +S+SK   +++  G +A + T E  +K
Sbjct: 1534 DFDWTGDMTKHHQIPKWLRVNSTEVDAVVASLSKKPSRNMSSGGIA-LDTNETPEK 1588



 Score =  172 bits (436), Expect = 8e-40
 Identities = 165/579 (28%), Positives = 247/579 (42%), Gaps = 31/579 (5%)
 Frame = +1

Query: 1204 NENIIGKTMEIMQSRVGYEREAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPA 1383
            N+++   T  +   +     EA S+ SS  + +L       P++S +K  SL+A++A+P 
Sbjct: 1656 NDDVYEFTEGLRSRKANRMEEAGSTGSSSGSRRLPP---PVPSSSSKKLRSLSALDARPV 1712

Query: 1384 THSKTMAEELEEGEIVQSGDSHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXX 1563
            + SK   ++LEEGEI  SGDSHM+ QQS S   ER++G++EQVLQ               
Sbjct: 1713 SSSKRTPDDLEEGEIAMSGDSHMDLQQSGSWNHERDDGEDEQVLQPKIKRKRSIRLRPKP 1772

Query: 1564 XADKTEDKTSSEKKVIPPGNMYQQSFSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHL 1743
             A+K ED+  S + V P     QQ   H                                
Sbjct: 1773 NAEKQEDR--SGEGVFPQHAARQQDTVHP------------------------------- 1799

Query: 1744 GAMSKRRKVLPTKEDSLLEALPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYT 1923
              + K+++ +P+++ S     P S+   L      +G  E S    E S E  ++KA   
Sbjct: 1800 --IVKQKRNMPSRKVS-----PASRSGKL---TYMSGSGEGSA---ERSKENWNSKAI-- 1844

Query: 1924 GGSSSSVKG-HMSDIIQKKCKTIYGKLHGAI---------NLS---KRNENPGHHRSTAS 2064
              +    +G  MSD +Q+KCK +  KL   I         N+S   +RNEN        S
Sbjct: 1845 DSTPPEFRGTKMSDSMQRKCKNVISKLWRRIDKEGHQIIPNISSWWRRNENSSFRGPAGS 1904

Query: 2065 HIDPRIIEQRLDRFEYGSVLDFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQ 2244
             +D + IEQR+D FEYG+V +F  D+Q ML+++ +H +Y  EV+++A  L  +F   +  
Sbjct: 1905 TLDLQKIEQRVDGFEYGAVTEFIADMQQMLKSVVQHFSYRHEVRIEAETLHNLFFNIMKI 1964

Query: 2245 TFPDVDFSSMKTRSLVSISHNTTCASPKQLPFQPRVHKSQEDLNLVSELPPTRHAARSSN 2424
             FPD DFS  K     ++S +    +      Q   H +       S     +H +  S 
Sbjct: 1965 AFPDSDFSEAKN----AMSFSNPGGAASGAAAQSSKHTASVHKRRASASEAEQHGSGHSR 2020

Query: 2425 VVDSDMREKLNHRENFTRTPKESKVIFDDRLQHKERGKGEKAQVTHPGDLVICXXXXXXX 2604
               S       H     R P+ S     D+LQ       + A + HP D+ I        
Sbjct: 2021 HNQSSEVPSRPHSSRSERDPRHSGSSSRDQLQ-------DGAGLLHPSDMFI-------- 2065

Query: 2605 XXXXXXSRLINTVPEVSQPNRAMP--PKDIWHPGQV----------------MQQQAHGW 2730
                   R  +++   S   RA P  P +   PG V                 QQ  H  
Sbjct: 2066 VKKKRQDRARSSIGSPSSSGRAGPLSPANPGRPGPVPSPRGARTPFQRDPHPSQQSMHSA 2125

Query: 2731 PQFAGMEKNDNNSLQVEKDAQWAKPVKRLRTDTGKRRPS 2847
               A  ++  ++S     D QWAKP KRLRTD+GKRRPS
Sbjct: 2126 GWGAHSDQGGSSSAPGIGDIQWAKPAKRLRTDSGKRRPS 2164


>ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis]
            gi|223549062|gb|EEF50551.1| Chromo domain protein,
            putative [Ricinus communis]
          Length = 2248

 Score =  454 bits (1168), Expect = e-124
 Identities = 223/292 (76%), Positives = 257/292 (88%), Gaps = 1/292 (0%)
 Frame = +1

Query: 1    WILDRILVKFHRSGHRVLLFSTMTKLLDILEEYLQWRHLQYRRIDGTTSLEDRETAIHEF 180
            WILDRIL+K  R+GHRVLLFSTMTKLLDILEEYLQWR L YRRIDGTTSLEDRE+AI +F
Sbjct: 1337 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDF 1396

Query: 181  NKPGSDCFVFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVI 360
            N P SDCF+FLLSIRAAGRGLNLQSADTV+IYDPDPNPKNEEQAVARAHRIGQKREV+VI
Sbjct: 1397 NSPDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1456

Query: 361  YMEAVVETIPSYEKEDELRSGGLIDDEDELAGKDRYMGSVESLVRNNIQQYKIDMADEVI 540
            YMEAVV+ I S++KEDELRSGG ID ED+LAGKDRYMGS+ESL+RNNIQQYKIDMADEVI
Sbjct: 1457 YMEAVVDKISSHQKEDELRSGGTIDLEDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVI 1516

Query: 541  NAGCFDQKTTQEDRRKTLETLLRDEERFQETVHDVPSLHEVNRMIARSEEEIEMFDRMDE 720
            NAG FDQ+TT E+RR TLETLL DEER+QETVH+VPSL EVNRMIARSE+E+E+FD+MDE
Sbjct: 1517 NAGRFDQRTTHEERRMTLETLLHDEERYQETVHNVPSLQEVNRMIARSEDEVELFDQMDE 1576

Query: 721  EMDWPGELVKHHQIPKWLRVGSREVNNATSSMSKQSLKRGLVA-PIGTQEEE 873
            ++DW  E+  + Q+PKWLR  +R+VN A +++SK+  K  L A  +G +  E
Sbjct: 1577 DLDWTEEMTSYDQVPKWLRASTRDVNAAIANLSKKPSKNILYASSVGMESSE 1628



 Score =  198 bits (503), Expect = 1e-47
 Identities = 179/565 (31%), Positives = 265/565 (46%), Gaps = 35/565 (6%)
 Frame = +1

Query: 1264 EAESSESSFHNAKLNQVHVTSPAASIQKFGSLAAIEAKPATHSKTMAEELEEGEIVQSGD 1443
            EA SS SS  N ++ ++   SP +S QKFGSL+A++A+P + SK + +ELEEGEI  SGD
Sbjct: 1726 EAGSSGSSSDNRRITRI--VSPVSS-QKFGSLSALDARPGSISKKLPDELEEGEIAVSGD 1782

Query: 1444 SHMECQQSESCPQEREEGDEEQVLQXXXXXXXXXXXXXXXXADKTEDKTSSEKKVIPPGN 1623
            SH++ QQS S   +REEG++EQVLQ                 ++ ++K+  E   +  G+
Sbjct: 1783 SHLDHQQSGSWIHDREEGEDEQVLQPKIKRKRSIRLRPRHTMERPDEKSGIE---VQRGD 1839

Query: 1624 MYQQSFSHSNSDHTKVVGQGLSNKDHGMTSEMNSDKSDHLGAMSKRRKVLPTK---EDSL 1794
                 F   +  +   +      K  G  +    D+SD     SK R+ +P++     S 
Sbjct: 1840 ACLLPF-QGDHKYQAQLRTDAEMKGFGEPNPSRHDQSD----SSKNRRTIPSRRIANTSK 1894

Query: 1795 LEALPYSKQRVLIKNNRCNGYVESSPDVPEHSTERLDTKAFYTGGSSSSVKG-HMSDIIQ 1971
            L A P        K++R +       D  EHS E  D K   T  S SSV G  MSD+IQ
Sbjct: 1895 LHASP--------KSSRLHMQAAPPEDAAEHSRESWDGKV--TNASGSSVLGSKMSDVIQ 1944

Query: 1972 KKCKTIYGKLHGAI------------NLSKRNENPGHHRSTASH-IDPRIIEQRLDRFEY 2112
            ++CK +  KL   I            +L KR E+ G+     ++ +D R IE R+DR EY
Sbjct: 1945 RRCKNVISKLQRRIDKEGQHIVPVLTDLWKRMESSGYMSGAGNNLLDLRKIETRVDRLEY 2004

Query: 2113 GSVLDFATDVQLMLENISRHPNYPIEVKMDARRLQTVFLQRIVQTFPDVDFSSMKTRSLV 2292
              V++   DVQ ML+   +   +  E + +AR++  +F   +   FPD DF   + R+ +
Sbjct: 2005 NGVMELVVDVQFMLKGAMQFYTFSHEARSEARKVHDLFFDILKIAFPDTDF--REARNAL 2062

Query: 2293 SISHNTTCASPKQLPFQPRVHKSQEDLNLVSELPPTRHAA-----RSSNVVDSDMREKLN 2457
            S S+  + +S    P Q  V +S+    L++E+ P   +A     R S     D R K++
Sbjct: 2063 SFSNPLSTSSSAPSPRQAAVGQSKRH-RLINEVEPDNGSAHKPIQRGSIPSGDDTRVKVH 2121

Query: 2458 HRENFTRTPKESKVIFDDRLQHKERGKGEKAQVTHPGDLVICXXXXXXXXXXXXXSRLIN 2637
                    PKE++         ++  + +     HPG+LVIC             SR  +
Sbjct: 2122 -------LPKETRHGTGSGSTREQYQQDDSP--LHPGELVICKKKRKDRDKSMAKSRPGS 2172

Query: 2638 TVPEVSQPNRAMPPKDIWHPGQ--------VMQQQAH--GW---PQFAGMEKNDNNSLQV 2778
            + P VS P+ A   + I  P Q        + QQ  H  GW   PQ A   +        
Sbjct: 2173 SGP-VSPPSMA---RTITSPVQGSASRETRMSQQNPHQQGWGNQPQPANNGRGGGGG--- 2225

Query: 2779 EKDAQWAKPVKRLRTDTGKRRPSHI 2853
                 WA PVKRLRTD GKRRPSH+
Sbjct: 2226 --SVGWANPVKRLRTDAGKRRPSHL 2248