BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00011773
         (403 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77352.1| unknown [Picea sitchensis]                             111   1e-22
ref|XP_002270166.1| PREDICTED: upstream activation factor subuni...   105   6e-21
ref|XP_006648278.1| PREDICTED: protein TRI1-like [Oryza brachyan...   104   1e-20
ref|XP_006415306.1| hypothetical protein EUTSA_v10008891mg [Eutr...   103   2e-20
ref|XP_006361226.1| PREDICTED: upstream activation factor subuni...   103   2e-20
ref|XP_006878621.1| hypothetical protein AMTR_s00011p00260300 [A...   103   2e-20
ref|XP_004244435.1| PREDICTED: upstream activation factor subuni...   103   3e-20
gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]     102   5e-20
ref|XP_006295268.1| hypothetical protein CARUB_v10024355mg [Caps...   101   1e-19
ref|XP_006408288.1| hypothetical protein EUTSA_v10021710mg [Eutr...   100   3e-19
gb|EOY25358.1| SWIB/MDM2 domain superfamily protein [Theobroma c...   100   3e-19
ref|XP_006410720.1| hypothetical protein EUTSA_v10017454mg [Eutr...    99   6e-19
ref|XP_002879559.1| SWIB complex BAF60b domain-containing protei...    99   6e-19
ref|NP_565810.1| SWIB/MDM2 domain-containing protein [Arabidopsi...    99   7e-19
ref|XP_004307291.1| PREDICTED: upstream activation factor subuni...    99   7e-19
ref|XP_001766284.1| predicted protein [Physcomitrella patens] gi...    99   7e-19
ref|XP_006298716.1| hypothetical protein CARUB_v10014811mg [Caps...    98   1e-18
ref|XP_006298715.1| hypothetical protein CARUB_v10014811mg, part...    98   1e-18
ref|XP_004952016.1| PREDICTED: upstream activation factor subuni...    97   3e-18
ref|NP_566210.1| SWIB/MDM2 domain-containing protein [Arabidopsi...    97   3e-18

>gb|ADE77352.1| unknown [Picea sitchensis]
          Length = 129

 Score =  111 bits (277), Expect = 1e-22
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = +2

Query: 62  LMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSIFEER 241
           L K +S+SP + KFLGVSE++R +A KKIWE+IKANNLQNP+ KTEI CD KLK+I  ++
Sbjct: 50  LFKPLSISPVMKKFLGVSEVARSEAIKKIWEHIKANNLQNPANKTEILCDEKLKAILGQK 109

Query: 242 DSVTMLEIAKLLSPHFPKAK 301
           ++V M EIAKL+SPHF K K
Sbjct: 110 ENVNMFEIAKLISPHFIKKK 129


>ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera] gi|147798865|emb|CAN68050.1| hypothetical
           protein VITISV_015104 [Vitis vinifera]
           gi|296090194|emb|CBI40013.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  105 bits (262), Expect = 6e-21
 Identities = 53/83 (63%), Positives = 59/83 (71%)
 Frame = +2

Query: 47  PSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKS 226
           P    + K V VSPAL KFLGV E SR +A KKIWE+IK NNLQNP+ K EI CD KLKS
Sbjct: 44  PRSGGITKPVPVSPALRKFLGVPEASRAEAVKKIWEHIKLNNLQNPTNKREILCDEKLKS 103

Query: 227 IFEERDSVTMLEIAKLLSPHFPK 295
           +FE +D V  LEI KLLS HF K
Sbjct: 104 VFEGKDKVGFLEIGKLLSHHFIK 126


>ref|XP_006648278.1| PREDICTED: protein TRI1-like [Oryza brachyantha]
          Length = 125

 Score =  104 bits (260), Expect = 1e-20
 Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
 Frame = +2

Query: 11  ASRLIMSMVGKDPSKNPLMKQVSVSPALSKFLG-VSEISRPQATKKIWEYIKANNLQNPS 187
           AS  +      +P K+ ++K + VS AL +F G   E+SR  ATK IW+YIKAN LQNP+
Sbjct: 28  ASAKVAMTEAAEPKKSGILKPLPVSDALRRFAGGTPEVSRAGATKLIWDYIKANGLQNPA 87

Query: 188 KKTEIFCDAKLKSIFEERDSVTMLEIAKLLSPHFPKA 298
            K EI+CD KLKS+F  RD + MLEIAKLLSPHF KA
Sbjct: 88  NKKEIYCDEKLKSLFAGRDKIGMLEIAKLLSPHFIKA 124


>ref|XP_006415306.1| hypothetical protein EUTSA_v10008891mg [Eutrema salsugineum]
           gi|557093077|gb|ESQ33659.1| hypothetical protein
           EUTSA_v10008891mg [Eutrema salsugineum]
          Length = 180

 Score =  103 bits (258), Expect = 2e-20
 Identities = 51/99 (51%), Positives = 65/99 (65%)
 Frame = +2

Query: 2   AYRASRLIMSMVGKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQN 181
           A  AS    +  G       ++K V VSP L+ F G +E+SR  A KK+WEYIK  NLQN
Sbjct: 81  AKAASNAAATGAGAGKEGKGILKTVPVSPTLASFAGENELSRATAVKKVWEYIKGQNLQN 140

Query: 182 PSKKTEIFCDAKLKSIFEERDSVTMLEIAKLLSPHFPKA 298
           P+ + EI CD KLK+IF+ +D+V   EIAKLLSPHFPK+
Sbjct: 141 PTNRREILCDDKLKTIFDGKDTVGFTEIAKLLSPHFPKS 179


>ref|XP_006361226.1| PREDICTED: upstream activation factor subunit UAF30-like [Solanum
           tuberosum]
          Length = 122

 Score =  103 bits (257), Expect = 2e-20
 Identities = 54/87 (62%), Positives = 63/87 (72%)
 Frame = +2

Query: 38  GKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAK 217
           GK  SK  ++K   +SPAL KF+G SEI+R  A KKIW+YIK NNLQNP+ K EI CD K
Sbjct: 36  GKGRSKG-ILKPQPISPALQKFVGTSEIARTDAVKKIWDYIKTNNLQNPANKKEINCDDK 94

Query: 218 LKSIFEERDSVTMLEIAKLLSPHFPKA 298
           LK+IF  +D V  LEIAKLLS HF KA
Sbjct: 95  LKTIFAGKDKVGFLEIAKLLSFHFQKA 121


>ref|XP_006878621.1| hypothetical protein AMTR_s00011p00260300 [Amborella trichopoda]
           gi|548831964|gb|ERM94766.1| hypothetical protein
           AMTR_s00011p00260300 [Amborella trichopoda]
          Length = 125

 Score =  103 bits (257), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 62/82 (75%)
 Frame = +2

Query: 50  SKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSI 229
           S + + K + VSPA+ KFLGV +ISR  A KK+WEYIKANNLQNP+ +  + CD KLK+I
Sbjct: 42  STSGIFKSIPVSPAMRKFLGVPDISRTDAMKKVWEYIKANNLQNPADRKVVMCDEKLKTI 101

Query: 230 FEERDSVTMLEIAKLLSPHFPK 295
           FE +D V +LEIAKL+S HF K
Sbjct: 102 FEGKDKVGILEIAKLMSVHFVK 123


>ref|XP_004244435.1| PREDICTED: upstream activation factor subunit UAF30-like [Solanum
           lycopersicum]
          Length = 122

 Score =  103 bits (256), Expect = 3e-20
 Identities = 54/87 (62%), Positives = 62/87 (71%)
 Frame = +2

Query: 38  GKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAK 217
           GK  SK  ++K   +SPAL KF+G SEISR  A KKIW+YIK NNLQNP+ K EI CD  
Sbjct: 36  GKGRSKG-ILKPQPISPALQKFVGTSEISRTDAVKKIWDYIKTNNLQNPANKKEINCDDM 94

Query: 218 LKSIFEERDSVTMLEIAKLLSPHFPKA 298
           LK+IF  +D V  LEIAKLLS HF KA
Sbjct: 95  LKTIFAGKDKVGFLEIAKLLSNHFQKA 121


>gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]
          Length = 148

 Score =  102 bits (254), Expect = 5e-20
 Identities = 54/87 (62%), Positives = 62/87 (71%)
 Frame = +2

Query: 38  GKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAK 217
           GK  SK  ++K   +SPAL KF+G SEISR  A KKIW+YIK NNLQNP+ K EI CD  
Sbjct: 62  GKGRSKG-ILKPQPISPALQKFVGTSEISRTDAVKKIWDYIKTNNLQNPANKKEINCDDM 120

Query: 218 LKSIFEERDSVTMLEIAKLLSPHFPKA 298
           LK+IF  +D V  LEIAKLLS HF KA
Sbjct: 121 LKTIFAGKDKVGFLEIAKLLSFHFQKA 147


>ref|XP_006295268.1| hypothetical protein CARUB_v10024355mg [Capsella rubella]
           gi|482563976|gb|EOA28166.1| hypothetical protein
           CARUB_v10024355mg [Capsella rubella]
          Length = 113

 Score =  101 bits (251), Expect = 1e-19
 Identities = 48/80 (60%), Positives = 61/80 (76%)
 Frame = +2

Query: 62  LMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSIFEER 241
           ++K V VS  L++F+G +E+SR  A KKIWEYIK NNLQNP+ K EI CD KLK+IF  +
Sbjct: 34  ILKVVPVSQPLAQFIGENEVSRTTAVKKIWEYIKLNNLQNPANKREILCDEKLKTIFSGK 93

Query: 242 DSVTMLEIAKLLSPHFPKAK 301
           DSV  LEI+K LS HFPK++
Sbjct: 94  DSVMFLEISKHLSQHFPKSR 113


>ref|XP_006408288.1| hypothetical protein EUTSA_v10021710mg [Eutrema salsugineum]
           gi|557109434|gb|ESQ49741.1| hypothetical protein
           EUTSA_v10021710mg [Eutrema salsugineum]
          Length = 146

 Score =  100 bits (248), Expect = 3e-19
 Identities = 48/90 (53%), Positives = 61/90 (67%)
 Frame = +2

Query: 26  MSMVGKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIF 205
           +S   K P    + K   VSPAL++FLG  E +R  A K+IW Y+K+++LQNP+ K EIF
Sbjct: 55  VSPAKKTPRSTGIFKATPVSPALAQFLGTGETTRTDAIKEIWTYVKSHDLQNPADKREIF 114

Query: 206 CDAKLKSIFEERDSVTMLEIAKLLSPHFPK 295
           CD KLK IF+ +D V  LEI KLLSPHF K
Sbjct: 115 CDEKLKQIFQGKDKVGFLEITKLLSPHFVK 144


>gb|EOY25358.1| SWIB/MDM2 domain superfamily protein [Theobroma cacao]
          Length = 117

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 53/99 (53%), Positives = 63/99 (63%)
 Frame = +2

Query: 2   AYRASRLIMSMVGKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQN 181
           A  +S    S    + S   LM+ + VSP L +FLG SE SR +A KKIW YIK + LQN
Sbjct: 18  AKASSTSFASSSASNTSGAGLMRMMPVSPQLGEFLGASESSRTEAVKKIWGYIKLHKLQN 77

Query: 182 PSKKTEIFCDAKLKSIFEERDSVTMLEIAKLLSPHFPKA 298
           P+ K EI CD KLK IF  +DSV M EI KLLSPHF K+
Sbjct: 78  PANKREILCDEKLKRIFAGKDSVGMFEITKLLSPHFVKS 116


>ref|XP_006410720.1| hypothetical protein EUTSA_v10017454mg [Eutrema salsugineum]
           gi|557111889|gb|ESQ52173.1| hypothetical protein
           EUTSA_v10017454mg [Eutrema salsugineum]
          Length = 112

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 46/79 (58%), Positives = 59/79 (74%)
 Frame = +2

Query: 62  LMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSIFEER 241
           ++K + VS  L+ F+G +E++R  A KKIWEYIK +NLQNP  K EI CD KLK+IF  +
Sbjct: 33  ILKVMPVSQPLANFIGANEVARTTAVKKIWEYIKLHNLQNPENKKEILCDGKLKTIFNGK 92

Query: 242 DSVTMLEIAKLLSPHFPKA 298
           D+V  LEIAKLLS HFPK+
Sbjct: 93  DTVGFLEIAKLLSQHFPKS 111


>ref|XP_002879559.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325398|gb|EFH55818.1| SWIB complex
           BAF60b domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 112

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 47/79 (59%), Positives = 59/79 (74%)
 Frame = +2

Query: 62  LMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSIFEER 241
           ++K V VS  L+ F+G +E+SR  A KKIWEYIK NNLQNP  K EI CD +LK+IF  +
Sbjct: 33  ILKVVPVSKPLATFIGENEVSRTTAVKKIWEYIKLNNLQNPENKREILCDEQLKTIFSGK 92

Query: 242 DSVTMLEIAKLLSPHFPKA 298
           D+V  LEI+KLLS HFPK+
Sbjct: 93  DTVGFLEISKLLSQHFPKS 111


>ref|NP_565810.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
           gi|13877943|gb|AAK44049.1|AF370234_1 unknown protein
           [Arabidopsis thaliana] gi|16323472|gb|AAL15230.1|
           unknown protein [Arabidopsis thaliana]
           gi|20197355|gb|AAM15040.1| Expressed protein
           [Arabidopsis thaliana] gi|20197527|gb|AAM15113.1|
           Expressed protein [Arabidopsis thaliana]
           gi|21618090|gb|AAM67140.1| unknown [Arabidopsis
           thaliana] gi|26451839|dbj|BAC43012.1| unknown protein
           [Arabidopsis thaliana] gi|330254033|gb|AEC09127.1|
           SWIB/MDM2 domain-containing protein [Arabidopsis
           thaliana]
          Length = 109

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 47/79 (59%), Positives = 59/79 (74%)
 Frame = +2

Query: 62  LMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSIFEER 241
           ++K V VS  L+ F+G +E+SR  A KKIWEYIK NNLQNP  K EI CD +LK+IF  +
Sbjct: 30  ILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQNPVNKREILCDEQLKTIFSGK 89

Query: 242 DSVTMLEIAKLLSPHFPKA 298
           D+V  LEI+KLLS HFPK+
Sbjct: 90  DTVGFLEISKLLSQHFPKS 108


>ref|XP_004307291.1| PREDICTED: upstream activation factor subunit spp27-like [Fragaria
           vesca subsp. vesca]
          Length = 154

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 46/80 (57%), Positives = 59/80 (73%)
 Frame = +2

Query: 62  LMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSIFEER 241
           +MK   +SPAL  FLG +E SR +A K+IW++IK N+LQNP+ K EI CD KLK +FE +
Sbjct: 75  IMKPRPISPALGSFLGAAESSRAEAVKQIWDHIKLNSLQNPANKKEIICDNKLKELFEGK 134

Query: 242 DSVTMLEIAKLLSPHFPKAK 301
           + V  LEI KLLSPHF KA+
Sbjct: 135 EKVNFLEIGKLLSPHFVKAE 154


>ref|XP_001766284.1| predicted protein [Physcomitrella patens]
           gi|162682498|gb|EDQ68916.1| predicted protein
           [Physcomitrella patens]
          Length = 107

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 47/81 (58%), Positives = 55/81 (67%)
 Frame = +2

Query: 62  LMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSIFEER 241
           L + + VSP L KFLGV E SRP++ K+IW+YIK   LQNP  K EI CD KLK +   +
Sbjct: 17  LTRAIQVSPTLKKFLGVGECSRPESMKRIWDYIKDQKLQNPQNKREILCDEKLKPVLGGK 76

Query: 242 DSVTMLEIAKLLSPHFPKAKK 304
           D V   EIAKLLS HFPKA K
Sbjct: 77  DKVGFTEIAKLLSEHFPKAPK 97


>ref|XP_006298716.1| hypothetical protein CARUB_v10014811mg [Capsella rubella]
           gi|482567425|gb|EOA31614.1| hypothetical protein
           CARUB_v10014811mg [Capsella rubella]
          Length = 154

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/89 (52%), Positives = 60/89 (67%)
 Frame = +2

Query: 29  SMVGKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFC 208
           S+  K P    + K   VSP L++FLG  E +R  A K+IW YIK+++LQNP+ K EIFC
Sbjct: 64  SLAKKTPRSTGIFKVTPVSPVLAQFLGTGETTRTDAIKEIWTYIKSHDLQNPADKREIFC 123

Query: 209 DAKLKSIFEERDSVTMLEIAKLLSPHFPK 295
           D  LK IFE +D V  LE++KLLSPHF K
Sbjct: 124 DETLKLIFEGKDKVGFLEVSKLLSPHFVK 152


>ref|XP_006298715.1| hypothetical protein CARUB_v10014811mg, partial [Capsella rubella]
           gi|482567424|gb|EOA31613.1| hypothetical protein
           CARUB_v10014811mg, partial [Capsella rubella]
          Length = 159

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/89 (52%), Positives = 60/89 (67%)
 Frame = +2

Query: 29  SMVGKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFC 208
           S+  K P    + K   VSP L++FLG  E +R  A K+IW YIK+++LQNP+ K EIFC
Sbjct: 69  SLAKKTPRSTGIFKVTPVSPVLAQFLGTGETTRTDAIKEIWTYIKSHDLQNPADKREIFC 128

Query: 209 DAKLKSIFEERDSVTMLEIAKLLSPHFPK 295
           D  LK IFE +D V  LE++KLLSPHF K
Sbjct: 129 DETLKLIFEGKDKVGFLEVSKLLSPHFVK 157


>ref|XP_004952016.1| PREDICTED: upstream activation factor subunit UAF30-like [Setaria
           italica]
          Length = 129

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 50/82 (60%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
 Frame = +2

Query: 53  KNPLMKQVSVSPALSKFLG-VSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSI 229
           K  +MK V VS  + +F G   E++RPQA K IW +IKAN LQNP+KKTEI CDA LKS+
Sbjct: 47  KRGIMKPVPVSEEMRRFAGGAPELARPQAVKLIWAHIKANGLQNPAKKTEINCDATLKSL 106

Query: 230 FEERDSVTMLEIAKLLSPHFPK 295
           F  RD V MLEI+KLL+PHF K
Sbjct: 107 FGGRDKVGMLEISKLLNPHFLK 128


>ref|NP_566210.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
           gi|6091763|gb|AAF03473.1|AC009327_12 hypothetical
           protein [Arabidopsis thaliana]
           gi|26450613|dbj|BAC42418.1| unknown protein [Arabidopsis
           thaliana] gi|28372894|gb|AAO39929.1| At3g03590
           [Arabidopsis thaliana] gi|332640439|gb|AEE73960.1|
           SWIB/MDM2 domain-containing protein [Arabidopsis
           thaliana]
          Length = 143

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/85 (56%), Positives = 57/85 (67%)
 Frame = +2

Query: 41  KDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKL 220
           K P    + K   VSP L++FLG  E SR  A K IW YIK+++LQNP+ K EIFCD  L
Sbjct: 57  KTPRSTGIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREIFCDETL 116

Query: 221 KSIFEERDSVTMLEIAKLLSPHFPK 295
           K IFE +D V  LEI+KLLSPHF K
Sbjct: 117 KLIFEGKDKVGFLEISKLLSPHFVK 141