BLASTX nr result
ID: Ephedra26_contig00011754
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00011754
(671 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida] 283 3e-74
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 283 4e-74
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 281 1e-73
ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis... 281 1e-73
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu... 281 1e-73
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola... 281 1e-73
ref|XP_006647856.1| PREDICTED: probable RNA-dependent RNA polyme... 281 2e-73
ref|XP_004498236.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 280 2e-73
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa... 280 3e-73
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps... 280 4e-73
gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tu... 279 5e-73
gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solan... 279 5e-73
dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus] 279 6e-73
gb|EPS70289.1| hypothetical protein M569_04468, partial [Genlise... 278 8e-73
ref|XP_006388173.1| hypothetical protein POPTR_0303s002201g, par... 278 1e-72
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 278 1e-72
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 278 1e-72
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis... 278 1e-72
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 278 1e-72
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper... 278 1e-72
>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
Length = 775
Score = 283 bits (724), Expect = 3e-74
Identities = 129/231 (55%), Positives = 171/231 (74%), Gaps = 8/231 (3%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L++ A E L +M GE+ +++ +ML CGY P+ EP+LSM+L FRA+KLL+L+ +TR
Sbjct: 327 ILHDSLKAQEALDLMSPGENTNILKEMLNCGYLPDAEPFLSMMLQTFRASKLLDLRTRTR 386
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQF--------DGGDPSQTILRSNKKV 336
IF+P+GR +MGCLDES TLEYG+VFVQ T QF D G + +
Sbjct: 387 IFIPKGRSMMGCLDESRTLEYGQVFVQFTGAGGRQFYEESHHFNDSGSANYNF------I 440
Query: 337 ITGRVIVAKNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLY 516
+ G V+VAKNPCLHPGD+++L+ VD P LHHMV+CVVFPQKG+RPHPNECSGSDLDGD+Y
Sbjct: 441 LKGNVVVAKNPCLHPGDIRVLKAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIY 500
Query: 517 FICWDESLIPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
F+CWD LIPP+ PM+Y P++ LDHDVT+EE++E+F NYM+ND LG+
Sbjct: 501 FVCWDPDLIPPRQVQPMDYTPAPSIQLDHDVTIEEVEEYFTNYMVNDGLGV 551
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 283 bits (723), Expect = 4e-74
Identities = 131/228 (57%), Positives = 170/228 (74%), Gaps = 5/228 (2%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L + A E L++M GE+ +V+ +ML CGY P+ EP+LSM+L FRAAKLLEL+ KTR
Sbjct: 637 ILKDPVAAQEALELMSPGENTNVLKEMLMCGYKPDAEPFLSMMLQTFRAAKLLELRTKTR 696
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQFDGGDPSQTILRSNKK-----VITG 345
IFVP GR +MGCLDE+ TLEYGEVFVQ++ Q G + R + ++ G
Sbjct: 697 IFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSFG---DSLMFRGSGSHHDNFILEG 753
Query: 346 RVIVAKNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFIC 525
+++VAKNPCLHPGDV++L V+ P LHHMV+CVVFPQKG+RPHPNECSGSDLDGD+YF+C
Sbjct: 754 KIVVAKNPCLHPGDVRVLWAVNVPTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVC 813
Query: 526 WDESLIPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
WD LIPPQ +PM+Y P LDHDV +EE++E+F NY++ND+LGI
Sbjct: 814 WDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDSLGI 861
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 281 bits (720), Expect = 1e-73
Identities = 127/224 (56%), Positives = 172/224 (76%), Gaps = 1/224 (0%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L + A E L++M GE+ +++ ++L CGY P+ EP+LSM+L FRA+KLLEL+ KTR
Sbjct: 652 ILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTR 711
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQFDGGDPSQTILRSNKK-VITGRVIV 357
IF+P GR +MGCLDE+ TL YG+VFVQ++ Q G + RS ++ ++ G V+V
Sbjct: 712 IFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVV 771
Query: 358 AKNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDES 537
AKNPCLHPGDV++L+ V+ P LHHMV+CVVFPQKG RPHPNECSGSDLDGD+YF+CWD+
Sbjct: 772 AKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDE 831
Query: 538 LIPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
LIPPQ D PM+Y +M LDHDV +E+++E+F NY++ND+LGI
Sbjct: 832 LIPPQQDPPMDYTPAQSMQLDHDVQIEDVEEYFTNYIVNDSLGI 875
>ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|316989901|gb|ADU77016.1| RNA-dependent RNA polymerase
1b [Cucumis sativus]
Length = 1115
Score = 281 bits (720), Expect = 1e-73
Identities = 128/217 (58%), Positives = 168/217 (77%), Gaps = 1/217 (0%)
Frame = +1
Query: 22 ALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTRIFVPEGR 201
A + L++M GE+ ++ +M+ CGY P+ EP+L M+LH FR +KL+EL++K+RIF+P GR
Sbjct: 654 AQQALELMSPGENTKILKEMMLCGYKPDSEPFLRMMLHTFRESKLMELRMKSRIFIPNGR 713
Query: 202 CLMGCLDESGTLEYGEVFVQVTEPQNSQFDGGDPSQTILRSNKK-VITGRVIVAKNPCLH 378
+MGCLDE+ LEYGEVFVQ + Q D + ++SN+ ++TG V+VAKNPCLH
Sbjct: 714 AMMGCLDETRNLEYGEVFVQCSAHQQLHDDRVIFKR--IKSNRHFIVTGTVVVAKNPCLH 771
Query: 379 PGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDESLIPPQVD 558
PGDV++L VD P LHHM++CVVFPQKG RPHPNECSGSDLDGD+YF+CWD LIPPQ
Sbjct: 772 PGDVRVLTAVDVPSLHHMIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQV 831
Query: 559 SPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
PM+Y P+ LDHDVT+EE+QE+FANYM+ND+LGI
Sbjct: 832 EPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGI 868
>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1065
Score = 281 bits (719), Expect = 1e-73
Identities = 127/225 (56%), Positives = 172/225 (76%), Gaps = 2/225 (0%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L++ A E L++M GE+ +++ ML CGY P+ EP+LSM+L FRA+KLL+L+ K+R
Sbjct: 633 ILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTKSR 692
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQFDGG-DPSQTILRSNKK-VITGRVI 354
IF+P GR +MGCLDES TLEYG+VFVQ T + +F P +N ++ G V+
Sbjct: 693 IFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSEDLHPFNNSRSTNCNFILKGNVV 752
Query: 355 VAKNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDE 534
VAKNPCLHPGD+++L+ VD P LHHMV+CVVFPQKG+RPHPNECSGSDLDGD+YF+CWD+
Sbjct: 753 VAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQ 812
Query: 535 SLIPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
+IPP+ PM Y P++ LDHDVT+EE++E+F NY++ND+LGI
Sbjct: 813 DMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGI 857
>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
Length = 963
Score = 281 bits (719), Expect = 1e-73
Identities = 127/225 (56%), Positives = 172/225 (76%), Gaps = 2/225 (0%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L++ A E L++M GE+ +++ ML CGY P+ EP+LSM+L FRA+KLL+L+ K+R
Sbjct: 482 ILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTKSR 541
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQFDGG-DPSQTILRSNKK-VITGRVI 354
IF+P GR +MGCLDES TLEYG+VFVQ T + +F P +N ++ G V+
Sbjct: 542 IFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSEDLHPFNNSRSTNCNFILKGNVV 601
Query: 355 VAKNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDE 534
VAKNPCLHPGD+++L+ VD P LHHMV+CVVFPQKG+RPHPNECSGSDLDGD+YF+CWD+
Sbjct: 602 VAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQ 661
Query: 535 SLIPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
+IPP+ PM Y P++ LDHDVT+EE++E+F NY++ND+LGI
Sbjct: 662 DMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGI 706
>ref|XP_006647856.1| PREDICTED: probable RNA-dependent RNA polymerase 1-like [Oryza
brachyantha]
Length = 1113
Score = 281 bits (718), Expect = 2e-73
Identities = 124/223 (55%), Positives = 170/223 (76%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
++ + A+E +++M GE + + +ML CGY P+ EPYLSM+L FRA+KLLELK K+R
Sbjct: 649 MVTEPQAAIEAIELMPMGEITNAVKEMLLCGYKPDDEPYLSMLLQTFRASKLLELKTKSR 708
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQFDGGDPSQTILRSNKKVITGRVIVA 360
IF+P+GR +MGCLDE+ TL+Y +VF+Q T N ++K ++TG+V++A
Sbjct: 709 IFIPKGRAMMGCLDETRTLKYEQVFIQATSSAND-------------NDKFIVTGKVVIA 755
Query: 361 KNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDESL 540
KNPCLHPGD++ILQ VD P LHHMVNCVVFPQ+G RPHPNECSGSDLDGD+YF+ WD +L
Sbjct: 756 KNPCLHPGDIRILQAVDLPVLHHMVNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDSTL 815
Query: 541 IPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
IPP++ +PM+Y P LDHDVT+EE++E+F NY++N++LGI
Sbjct: 816 IPPRMVAPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNESLGI 858
>ref|XP_004498236.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Cicer
arietinum]
Length = 1126
Score = 280 bits (717), Expect = 2e-73
Identities = 131/223 (58%), Positives = 166/223 (74%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L N A EVL +M GE +++ +ML CGY P EP+LSM+L FRA+KLLEL+ KTR
Sbjct: 652 ILTNSLKAQEVLDLMSTGEITNILKEMLFCGYKPNVEPFLSMMLQTFRASKLLELRQKTR 711
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQFDGGDPSQTILRSNKKVITGRVIVA 360
IF+P+GR +MG LDE+ TLEYGEVFVQ + + S G +N V+TG+V+VA
Sbjct: 712 IFIPKGRAMMGVLDETRTLEYGEVFVQYSNNRISSLSYGS-------ANSLVVTGKVVVA 764
Query: 361 KNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDESL 540
KNPCLHPGDV++L+ VD P LHHMV+CVVFPQKG RPHPNECSGSDLDGD+YF+CWD L
Sbjct: 765 KNPCLHPGDVRVLKAVDVPALHHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDPEL 824
Query: 541 IPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
IPP+ PM Y + + L HDV +EE++E+F NY+LND+LGI
Sbjct: 825 IPPETTEPMEYASVQPIVLYHDVEIEEVEEYFTNYILNDSLGI 867
>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
[Nicotiana glutinosa]
Length = 1117
Score = 280 bits (716), Expect = 3e-73
Identities = 127/225 (56%), Positives = 172/225 (76%), Gaps = 2/225 (0%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L++ A E L++M GE+ +++ +ML CGY P+ EP+LSM+L FRA+KLL+L+ ++R
Sbjct: 637 ILHDTLKAQEALELMSPGENTNILKEMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSR 696
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQF-DGGDPSQTILRSNKK-VITGRVI 354
IF+P GR +MGCLDES TLEYG+VFVQ T QF + P +N ++ G V+
Sbjct: 697 IFIPNGRTMMGCLDESRTLEYGQVFVQFTGTGRRQFYEESHPFNDSGSTNCDFILEGNVV 756
Query: 355 VAKNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDE 534
VAKNPCLHPGD+++L+ VD P LHHMV+CVVFPQKG+RPHPNECSGSDLDGD+YF+CWD
Sbjct: 757 VAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDP 816
Query: 535 SLIPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
L+PP+ PM+Y P+ LDHDVT+EE++E+F NY++ND+LGI
Sbjct: 817 DLVPPRQFQPMDYTPAPSTQLDHDVTIEEVEEYFTNYIVNDSLGI 861
>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
gi|482575337|gb|EOA39524.1| hypothetical protein
CARUB_v10008144mg [Capsella rubella]
Length = 1107
Score = 280 bits (715), Expect = 4e-73
Identities = 129/223 (57%), Positives = 167/223 (74%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L + A E L +M GE+ +++ ++L CGY P+ EP+LSM+L FRA+KLLEL+ KTR
Sbjct: 645 ILTDPLEAHEALGLMAPGENTNILKQLLLCGYKPDAEPFLSMMLQNFRASKLLELRTKTR 704
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQFDGGDPSQTILRSNKKVITGRVIVA 360
IF+P GR +MGCLDE+ TLEYG+V VQ + P + + +ITG V+VA
Sbjct: 705 IFIPGGRSMMGCLDETRTLEYGQVVVQYSNPT-------------MPGKRYIITGPVVVA 751
Query: 361 KNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDESL 540
KNPCLHPGDV++LQ V+ P L+HMV+CVVFPQKG RPHPNECSGSDLDGD+YFICWD L
Sbjct: 752 KNPCLHPGDVRVLQAVNVPALYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFICWDHEL 811
Query: 541 IPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
IPP+ PM+Y PA LDHDVT+EE++E+FANY++ND+LGI
Sbjct: 812 IPPRTSEPMDYTPEPAQILDHDVTIEEVEEYFANYIVNDSLGI 854
>gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 935
Score = 279 bits (714), Expect = 5e-73
Identities = 126/225 (56%), Positives = 171/225 (76%), Gaps = 2/225 (0%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L++ A E L++M GE+ +++ ML CGY P+ EP+LSM+L FRA+KLL+L+ K+R
Sbjct: 634 ILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTKSR 693
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQFDGG-DPSQTILRSNKK-VITGRVI 354
IF+P GR +MGCLDES TLEYG+VFVQ T + +F P +N ++ G V+
Sbjct: 694 IFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSEDLHPFNNSRSTNCNFILKGNVV 753
Query: 355 VAKNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDE 534
VAKNPCLHPGD+++L+ VD P LHHMV+CVVFPQKG+RPHPNECSGSDLDGD+YF+CWD+
Sbjct: 754 VAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQ 813
Query: 535 SLIPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
+IPP+ M + PP++ LDHDVT+EE++E+F NY++ND LGI
Sbjct: 814 DMIPPRQVQAMEFPPPPSIQLDHDVTIEEVEEYFTNYIVNDGLGI 858
>gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solanum demissum]
Length = 1137
Score = 279 bits (714), Expect = 5e-73
Identities = 126/225 (56%), Positives = 171/225 (76%), Gaps = 2/225 (0%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L++ A E L++M GE+ +++ ML CGY P+ EP+LSM+L FRA+KLL+L+ K+R
Sbjct: 670 ILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTKSR 729
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQFDGG-DPSQTILRSNKK-VITGRVI 354
IF+P GR +MGCLDES TLEYG+VFVQ T + +F P +N ++ G V+
Sbjct: 730 IFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSEDLHPFNNSRSTNCNFILKGNVV 789
Query: 355 VAKNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDE 534
VAKNPCLHPGD+++L+ VD P LHHMV+CVVFPQKG+RPHPNECSGSDLDGD+YF+CWD+
Sbjct: 790 VAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQ 849
Query: 535 SLIPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
+IPP+ M + PP++ LDHDVT+EE++E+F NY++ND LGI
Sbjct: 850 DMIPPRQVQAMEFPPPPSIQLDHDVTIEEVEEYFTNYIVNDGLGI 894
>dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]
Length = 1115
Score = 279 bits (713), Expect = 6e-73
Identities = 127/217 (58%), Positives = 167/217 (76%), Gaps = 1/217 (0%)
Frame = +1
Query: 22 ALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTRIFVPEGR 201
A + L++M GE+ ++ +M+ CGY P+ EP+L M+LH FR +KL+EL++K+RIF+P GR
Sbjct: 654 AQQALELMSPGENTKILKEMMLCGYKPDSEPFLRMMLHTFRESKLMELRMKSRIFIPNGR 713
Query: 202 CLMGCLDESGTLEYGEVFVQVTEPQNSQFDGGDPSQTILRSNKK-VITGRVIVAKNPCLH 378
+MGCLDE+ LEYGEVF Q + Q D + ++SN+ ++TG V+VAKNPCLH
Sbjct: 714 AMMGCLDETRNLEYGEVFWQCSAHQQLHDDRVIFKR--IKSNRHFIVTGTVVVAKNPCLH 771
Query: 379 PGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDESLIPPQVD 558
PGDV++L VD P LHHM++CVVFPQKG RPHPNECSGSDLDGD+YF+CWD LIPPQ
Sbjct: 772 PGDVRVLTAVDVPSLHHMIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQV 831
Query: 559 SPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
PM+Y P+ LDHDVT+EE+QE+FANYM+ND+LGI
Sbjct: 832 EPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGI 868
>gb|EPS70289.1| hypothetical protein M569_04468, partial [Genlisea aurea]
Length = 1095
Score = 278 bits (712), Expect = 8e-73
Identities = 124/216 (57%), Positives = 166/216 (76%)
Frame = +1
Query: 22 ALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTRIFVPEGR 201
A EVL +M GE+ ++ +ML+CGY P+ EP+LSM+L AFR++KLL+L+ K+RIFVPE R
Sbjct: 638 AQEVLDLMAPGENSHILKEMLKCGYKPDEEPFLSMMLRAFRSSKLLDLRTKSRIFVPEAR 697
Query: 202 CLMGCLDESGTLEYGEVFVQVTEPQNSQFDGGDPSQTILRSNKKVITGRVIVAKNPCLHP 381
LMGCLDE+GTLEYGEVFVQ++ + QF P+ + V++G V VAKNPCLHP
Sbjct: 698 QLMGCLDETGTLEYGEVFVQISGSRQRQFFFDGPAVGTVNDYNSVVSGTVFVAKNPCLHP 757
Query: 382 GDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDESLIPPQVDS 561
GD+++++ VD P LHHMV+C+VFPQKG RP P+ECSGSDLDGD+YF+CWD L P Q D
Sbjct: 758 GDIRVVKAVDVPILHHMVDCLVFPQKGHRPLPDECSGSDLDGDIYFVCWDTDLFPLQQDP 817
Query: 562 PMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
PM+Y P LDHDVT++E+Q++F +Y++ND LG+
Sbjct: 818 PMDYDPAPTTRLDHDVTMQEVQKYFTDYIVNDTLGV 853
>ref|XP_006388173.1| hypothetical protein POPTR_0303s002201g, partial [Populus
trichocarpa] gi|550309641|gb|ERP47087.1| hypothetical
protein POPTR_0303s002201g, partial [Populus
trichocarpa]
Length = 642
Score = 278 bits (711), Expect = 1e-72
Identities = 131/227 (57%), Positives = 166/227 (73%), Gaps = 4/227 (1%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L + A E L++M GGE+ V+ ML CGY P EP+L+M+L RA KLL+L+ K+R
Sbjct: 164 ILTDPIKAQEALELMAGGENARVLNGMLACGYKPGAEPFLAMMLETLRALKLLDLRTKSR 223
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQ----NSQFDGGDPSQTILRSNKKVITGR 348
IFVP GR + GCLDE+ TLEYG+ FVQ + + + F GG Q L + G+
Sbjct: 224 IFVPNGRAMTGCLDETRTLEYGQAFVQYSRARFRKLHDHFKGGKTDQHTL-----IFRGK 278
Query: 349 VIVAKNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICW 528
++VAKNPCLHPGDVQIL+ VD P LHHMV+C+VFPQKG+RPH NECSGSDLDGD+YF+CW
Sbjct: 279 IVVAKNPCLHPGDVQILEAVDVPALHHMVDCIVFPQKGKRPHTNECSGSDLDGDVYFVCW 338
Query: 529 DESLIPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
D LIPPQ PM+Y AP LDHDVT+EE+QE+FA+Y+LND+LGI
Sbjct: 339 DTDLIPPQKFPPMDYTAPQTTILDHDVTIEEVQEYFADYLLNDSLGI 385
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 278 bits (711), Expect = 1e-72
Identities = 128/224 (57%), Positives = 170/224 (75%), Gaps = 1/224 (0%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L + A E L++M GE+ +++ +ML CGY P+ EP+LSM+L FRA+KLLEL+ KTR
Sbjct: 648 MLTDPLRAQEALELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTKTR 707
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQ-NSQFDGGDPSQTILRSNKKVITGRVIV 357
IF+P GR +MGCLDE+ TLE+G+VFV+ + + + +D D R +I G V+V
Sbjct: 708 IFIPNGRSMMGCLDETRTLEHGQVFVKFSGSRFRNLYDSSDMFSERGRGQCYLIKGSVVV 767
Query: 358 AKNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDES 537
AKNPCLHPGD++IL+ VD P LHHMV+CVVFPQKG RPHPNECSGSDLDGD+YF+CWD
Sbjct: 768 AKNPCLHPGDLRILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPE 827
Query: 538 LIPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
LIP Q SPM+Y P + LDHDVT+EE++E+F NY++ND+LG+
Sbjct: 828 LIPSQQISPMDYTPEPPLQLDHDVTIEEVEEYFTNYIVNDSLGV 871
>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
tuberosum]
Length = 1115
Score = 278 bits (710), Expect = 1e-72
Identities = 126/225 (56%), Positives = 171/225 (76%), Gaps = 2/225 (0%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L++ A E L++M GE+ +++ ML CGY P+ EP+LSM+L FRA+KLL+L+ K+R
Sbjct: 634 ILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTKSR 693
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQFDGG-DPSQTILRSNKK-VITGRVI 354
IF+P GR +MGCLDES TLEYG+VFVQ T + +F P +N ++ G V+
Sbjct: 694 IFIPNGRLMMGCLDESRTLEYGQVFVQFTGSGHREFSEDLHPFNNSRSTNCNFILKGNVV 753
Query: 355 VAKNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDE 534
VAKNPCLHPGD+++L+ VD P LHHMV+CVVFPQKG+RPHPNECSGSDLDGD+YF+CWD+
Sbjct: 754 VAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQ 813
Query: 535 SLIPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
+IPP+ M Y P++ LDHDVT+EE++E+F NY++ND+LGI
Sbjct: 814 DMIPPRQVQAMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGI 858
>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
1a [Cucumis sativus]
Length = 1130
Score = 278 bits (710), Expect = 1e-72
Identities = 128/223 (57%), Positives = 166/223 (74%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L + A E L++M GE+ +++ +ML+CGY P+ EPYLSM+L FRA+KLLEL+ K+R
Sbjct: 646 ILTDPLKAQEALELMSPGENTNILKEMLKCGYQPDVEPYLSMMLQTFRASKLLELRTKSR 705
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQFDGGDPSQTILRSNKKVITGRVIVA 360
IF+P GR +MGCLDE+ TLEYG+VFVQ++ ++ I R + VI G V VA
Sbjct: 706 IFIPNGRAMMGCLDETRTLEYGQVFVQISSGRHRNLSESFAFNRIGREHHLVIEGNVTVA 765
Query: 361 KNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDESL 540
KNPCLHPGDV++L+ V+ P L+HMV+CVVFPQKG RPHPNECSGSDLDGD+YF+CWD L
Sbjct: 766 KNPCLHPGDVRVLKAVNIPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTEL 825
Query: 541 IPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
IP + PM+Y P LD DVT E+IQE+F NYM+ND+LGI
Sbjct: 826 IPSRQIPPMDYTPAPPNELDRDVTTEDIQEYFVNYMVNDSLGI 868
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 278 bits (710), Expect = 1e-72
Identities = 127/225 (56%), Positives = 170/225 (75%), Gaps = 2/225 (0%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L++ A E L++M GE+ +++ +ML CGY P+ EP+LSM+L FRA+KLL+L+ +TR
Sbjct: 636 ILHDSLKAQEALELMSPGENTNILKEMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRTR 695
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQF-DGGDPSQTILRSNKK-VITGRVI 354
IF+P GR +MGCLDES TLEYG+VFVQ + QF + P +N ++ G V+
Sbjct: 696 IFIPNGRTMMGCLDESRTLEYGQVFVQFSGAGRRQFFEESHPFNDSGSANCDFILKGNVV 755
Query: 355 VAKNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDE 534
VAKNPCLHPGD+++L+ VD P LHHMV+CVVFPQKG+RPHPNECSGSDLDGD+YF+CWD
Sbjct: 756 VAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDP 815
Query: 535 SLIPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
LIPP+ M+Y P LDHDVT+EE++E+F NY++ND+LGI
Sbjct: 816 DLIPPRQVQSMDYTPAPTTQLDHDVTIEEVEEYFTNYIINDSLGI 860
>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
[Solanum lycopersicum]
Length = 1114
Score = 278 bits (710), Expect = 1e-72
Identities = 125/225 (55%), Positives = 172/225 (76%), Gaps = 2/225 (0%)
Frame = +1
Query: 1 VLNNKETALEVLQIMGGGEHHDVIVKMLQCGYSPEHEPYLSMILHAFRAAKLLELKVKTR 180
+L++ A E L++M GE+ +++ ML CGY P+ EP+LSM+L FRA+KLL+L+ ++R
Sbjct: 634 ILHDSLKAQEALELMSPGENTNILKAMLNCGYKPDAEPFLSMMLQTFRASKLLDLRTRSR 693
Query: 181 IFVPEGRCLMGCLDESGTLEYGEVFVQVTEPQNSQF-DGGDPSQTILRSNKK-VITGRVI 354
IF+P GR +MGCLDES TLEYG+VFVQ T + +F D P +N ++ G V+
Sbjct: 694 IFIPNGRTMMGCLDESRTLEYGQVFVQFTGAGHGEFSDDLHPFNNSRSTNSNFILKGNVV 753
Query: 355 VAKNPCLHPGDVQILQTVDFPWLHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFICWDE 534
VAKNPCLHPGD+++L+ V+ LHHMV+CVVFPQKG+RPHPNECSGSDLDGD+YF+CWD+
Sbjct: 754 VAKNPCLHPGDIRVLKAVNVRALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQ 813
Query: 535 SLIPPQVDSPMNYFAPPAMALDHDVTVEEIQEFFANYMLNDALGI 669
+IPP+ PM Y P++ LDHDVT+EE++E+F NY++ND+LGI
Sbjct: 814 DMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGI 858