BLASTX nr result

ID: Ephedra26_contig00011747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00011747
         (937 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24195.1| unknown [Picea sitchensis]                              97   1e-17
gb|AEW09315.1| hypothetical protein UMN_3444_01, partial [Pinus ...    75   3e-11
gb|EMJ00549.1| hypothetical protein PRUPE_ppa025175mg, partial [...    62   3e-07

>gb|ABK24195.1| unknown [Picea sitchensis]
          Length = 308

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 76/212 (35%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
 Frame = +1

Query: 268 ESPCGSPKMWRPGSRNYN--------YDYNDSV-SEEIAKSRQELMKLLEGLPESCYDLS 420
           E  C SP +WRPGS +Y         Y Y  S  +EEIA+ RQELMK++EG+PES Y+LS
Sbjct: 22  ELSCASPPLWRPGSSSYPGSTHTTYAYPYPMSARAEEIARGRQELMKMVEGMPESAYELS 81

Query: 421 LSDLVEKR-------------EVLKRDEERDYSHDKEKRGGTTKVNGCNXXXXXXXXXXX 561
           LSDLVE++             E  K +E      DK K  G + +NG +           
Sbjct: 82  LSDLVEQKAAMQKRSNEEVDTETQKAEERSSGKQDKRKTSG-SYINGSS------KSKGE 134

Query: 562 XXNPFLLNIFVPKSFTCRSCNNXXXXXXXXXXXXXXXXXXXXXXKKVSRFASLFHSLLKV 741
              PFLLNIF+P+S T RS                         +K S       +L K+
Sbjct: 135 ITKPFLLNIFIPRSLTHRS------HFTSRPMPTNCSQVKSHDSEKGSGNTYPVANLYKI 188

Query: 742 -VKIRTVLSSYGFSKVSPKPSFVNHNNSYEAL 834
                   SS GFSKVSPKP       +Y+AL
Sbjct: 189 KASYSPTGSSIGFSKVSPKPFSAQDGQTYQAL 220


>gb|AEW09315.1| hypothetical protein UMN_3444_01, partial [Pinus radiata]
           gi|376340465|gb|AFB34737.1| hypothetical protein
           UMN_3444_01, partial [Pinus mugo]
           gi|376340467|gb|AFB34738.1| hypothetical protein
           UMN_3444_01, partial [Pinus mugo]
           gi|383133420|gb|AFG47603.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133421|gb|AFG47604.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133422|gb|AFG47605.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133423|gb|AFG47606.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133424|gb|AFG47607.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133425|gb|AFG47608.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133426|gb|AFG47609.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133427|gb|AFG47610.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133428|gb|AFG47611.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133429|gb|AFG47612.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133430|gb|AFG47613.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133431|gb|AFG47614.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133432|gb|AFG47615.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133433|gb|AFG47616.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133434|gb|AFG47617.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133435|gb|AFG47618.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133436|gb|AFG47619.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
           gi|383133437|gb|AFG47620.1| hypothetical protein
           UMN_3444_01, partial [Pinus taeda]
          Length = 108

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 9/85 (10%)
 Frame = +1

Query: 268 ESPCGSPKMWRPGSRNY--------NYDYNDSV-SEEIAKSRQELMKLLEGLPESCYDLS 420
           E  C SP +WRPGS +Y        +Y Y  S  +EEIAK RQELMK++EG+PES Y+LS
Sbjct: 22  EQSCTSPPLWRPGSSSYPMSTPTAYSYPYPMSARAEEIAKGRQELMKMVEGMPESAYELS 81

Query: 421 LSDLVEKREVLKRDEERDYSHDKEK 495
           LSDLVE++  +++    +   +  K
Sbjct: 82  LSDLVEQKAAMQKRSNEEVQTETHK 106


>gb|EMJ00549.1| hypothetical protein PRUPE_ppa025175mg, partial [Prunus persica]
          Length = 330

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
 Frame = +1

Query: 241 GGNEDINDAESPCGSPKMWRPGSRNYNYDYNDSVS--EEIAKSRQELMKLLEGLPESCYD 414
           G + D ++ +S   SP +W   SR  NY      S  + IA+ ++E+M++++ +PESCY+
Sbjct: 81  GASTDDDEYDSRVCSPPLWETASRVNNYRSLSPASRTQAIARGQREMMEMVKNMPESCYE 140

Query: 415 LSLSDLVEKREVLKRDEERDYSHDKEKRGGTTKV 516
           LSL DLVE ++ +  DEE D   ++E+   +T+V
Sbjct: 141 LSLKDLVEHKKPMV-DEEDDRDQNEEEDDKSTQV 173


Top