BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00011535
         (1368 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65603.1| hypothetical protein VITISV_021511 [Vitis vinifera]   142   2e-55
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]   140   2e-53
gb|EOY19734.1| Copia-like retrotransposable element, putative [T...   160   3e-53
gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]                      149   5e-53
emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]   144   6e-53
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]   144   1e-52
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   154   2e-51
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   138   3e-51
emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indi...   140   4e-51
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   137   5e-51
emb|CAN74194.1| hypothetical protein VITISV_040578 [Vitis vinifera]   137   9e-51
dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. ru...   129   2e-50
emb|CAN72440.1| hypothetical protein VITISV_039162 [Vitis vinifera]   134   2e-50
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   127   3e-50
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   127   3e-50
emb|CAN72663.1| hypothetical protein VITISV_031849 [Vitis vinifera]   134   3e-50
emb|CAN72018.1| hypothetical protein VITISV_001841 [Vitis vinifera]   134   3e-50
emb|CAN70689.1| hypothetical protein VITISV_012155 [Vitis vinifera]   134   3e-50
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   127   3e-50
emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group]         134   5e-50

>emb|CAN65603.1| hypothetical protein VITISV_021511 [Vitis vinifera]
          Length = 491

 Score =  142 bits (359), Expect(2) = 2e-55
 Identities = 76/219 (34%), Positives = 123/219 (56%), Gaps = 3/219 (1%)
 Frame = +2

Query: 11  NLEEEVYMVQPLGYVQQEGLS-CKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK*NPN 187
           NLEEEVYM  P G+ +  G   CK +KSLY LKQ+PR W++RL +F+K +G+  ++ + +
Sbjct: 98  NLEEEVYMDPPPGFDEHFGSKVCKLKKSLYGLKQSPRAWFERLTQFVKNQGYFQAQ-SDH 156

Query: 188 LWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGFQIE 367
             ++     G+  +L  +VDDII+TGD+   +   K  L  EFEI +LG  +Y+LG ++ 
Sbjct: 157 TMFIKHSNDGKIAILIVYVDDIILTGDHVTEMDRLKKSLALEFEIKDLGSLRYFLGMEVA 216

Query: 368 KDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELG--FDFSXXXXXXXXXXXQNIIESL 541
           +    + + Q+ Y   +L+  G+    P   PI+       +           Q ++  L
Sbjct: 217 RSKRGIVVSQRKYILDLLKETGMSGCRPADTPIDPNQKLGDTNDGNLVNTTRYQKLVGKL 276

Query: 542 LYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
           +YL +TRPDI +AV  +++F+H P E H  A  R+ +YL
Sbjct: 277 IYLCHTRPDIAFAVSIVSQFMHSPYEVHFEAVYRILRYL 315



 Score =  102 bits (253), Expect(2) = 2e-55
 Identities = 55/149 (36%), Positives = 87/149 (58%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            G+ FKK +    E YTN+D+A   I RKST+GY        ++W S +     R+ ++ E
Sbjct: 322  GLFFKKSEQKTIEAYTNADWAGSVIDRKSTSGYCTYIWGNLVTWRSKKQSVVARSSAEAE 381

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YRA+ +GV E L L  I ++L +P+  P+ ++ DN+ A  +  NP+ H+ +K++E++  F
Sbjct: 382  YRAMAHGVCEILWLKKILEELKIPLEMPMKLYCDNKAAISIAHNPVQHDRTKHVEIDRHF 441

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRL 1163
            I+D  E   I M  IST +Q  + LTK L
Sbjct: 442  IKDKLEASIICMSFISTTQQIVDILTKGL 470


>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score =  140 bits (354), Expect(2) = 2e-53
 Identities = 79/228 (34%), Positives = 130/228 (57%), Gaps = 4/228 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGYVQQ--EGLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK* 178
            H  L+ E+YM QP+G+  Q      CK RK+LY LKQAPR WY ++ EFL + G+ ++  
Sbjct: 900  HGELDREIYMNQPMGFQSQGHPEYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVTPA 959

Query: 179  NPNLWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGF 358
            + +L+   K   G+  ++  +VDD+IITGD+ E I   K+ L   FE+  LG+ K++LG 
Sbjct: 960  DSSLF--VKANGGKLAIVLVYVDDLIITGDDVEEIFRTKENLSVRFEMKELGQLKHFLGL 1017

Query: 359  QIEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELGFDF--SXXXXXXXXXXXQNII 532
            ++++ +  + L Q+ Y + +L+  G+    P   P+E                   + ++
Sbjct: 1018 EVDRTNEGIFLCQQKYAKDLLKKFGMLECKPISTPMEPNAKMCEHEGKDLKDATMYRQLV 1077

Query: 533  ESLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYLVDKIYY 676
             SLLYLT T PDI YAV  ++R++ +PK+ HL A +R+ +++   I Y
Sbjct: 1078 GSLLYLTLTXPDISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDY 1125



 Score = 97.1 bits (240), Expect(2) = 2e-53
 Identities = 51/153 (33%), Positives = 84/153 (54%)
 Frame = +3

Query: 711  NYGVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSK 890
            +YG+ +KK ++     Y ++D+A D   R STTGY+   G   ISW S R    + + ++
Sbjct: 1124 DYGLLYKKXEDCKLVGYCDADYAGDHDTRXSTTGYVFMLGSGAISWCSKRQPTVSLSTTE 1183

Query: 891  VEYRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVEC 1070
             EYRA      E + LI +  DL   ++  +P++ DN+ A +L  NP+FH  +K++EV  
Sbjct: 1184 AEYRAAAMATQESMWLIRLMNDLHQLVDYAVPLYCDNQSAVRLAENPVFHARTKHVEVHY 1243

Query: 1071 LFIRDLHEEGTIQMKSISTHKQKENGLTKRLSG 1169
             FIR+   +  +++  I +  Q  +  TK LSG
Sbjct: 1244 HFIREKVLKEEVELNQIKSEDQVADLFTKGLSG 1276


>gb|EOY19734.1| Copia-like retrotransposable element, putative [Theobroma cacao]
          Length = 1207

 Score =  160 bits (404), Expect(2) = 3e-53
 Identities = 84/225 (37%), Positives = 135/225 (60%), Gaps = 4/225 (1%)
 Frame = +2

Query: 14   LEEEVYMVQPLGYVQ--QEGLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK*NPN 187
            LEE++++ QP G+++   E   CK +K+LY LKQAPR WY R+  +L  KGF MS+  P 
Sbjct: 813  LEEDIFIEQPKGFIEPGMENRICKLKKALYGLKQAPRAWYARVDNYLCNKGFHMSESKPT 872

Query: 188  LWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGFQIE 367
            L Y+    +G+ ++++ +VDDI++T  N+EL+ +FK E+  EF++TNLG   Y+LG +  
Sbjct: 873  L-YVCCSSAGKQVIVSIYVDDILVTSLNTELLLKFKKEMMEEFKMTNLGLITYFLGLEFV 931

Query: 368  KDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPI--ELGFDFSXXXXXXXXXXXQNIIESL 541
            +   F+ LHQ+ Y   +L+   +QN      PI   + F  S           + +I SL
Sbjct: 932  QAEKFIILHQQKYATELLKKFKMQNCKAISTPIAANVKFSLSNNEELADATLYRRLIGSL 991

Query: 542  LYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYLVDKIYY 676
            LYL+++ PDI ++   L+RF+H P   HL+A KR+ +Y+   I +
Sbjct: 992  LYLSSSGPDIMFSTSLLSRFMHQPTVTHLSAAKRILRYIKGSINF 1036



 Score = 77.4 bits (189), Expect(2) = 3e-53
 Identities = 46/151 (30%), Positives = 79/151 (52%)
 Frame = +3

Query: 711  NYGVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSK 890
            N+G+KF ++ + + + + +SD+A      KSTTG++  FG    SWAS + +   ++ ++
Sbjct: 1035 NFGIKFGREQSHHLQGFLDSDWAGSLDDSKSTTGFVFSFGSGVFSWASKKQEVVAQSSAE 1094

Query: 891  VEYRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVEC 1070
             EY +     N  L L  I   LG   N P  ++ DN+ A  +  NP+ H  +K+I+V+ 
Sbjct: 1095 AEYISTAAATNHSLWLRKILSCLGFSQNDPNVLWMDNQSAIAMSKNPVQHGRTKHIQVKF 1154

Query: 1071 LFIRDLHEEGTIQMKSISTHKQKENGLTKRL 1163
              IRD  +   I ++  S+  Q    +TK L
Sbjct: 1155 HMIRDAVKNKEIDVQYCSSQDQVVYIMTKGL 1185


>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
          Length = 1180

 Score =  149 bits (377), Expect(2) = 5e-53
 Identities = 82/222 (36%), Positives = 128/222 (57%), Gaps = 4/222 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGYVQQEG--LSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK* 178
            H +L EEVYM  P GY    G  + CK +KSLY LKQ+PR W+ R  +F+KK G+  S  
Sbjct: 785  HGDLHEEVYMDLPPGYGTSTGEQVVCKLKKSLYGLKQSPRAWFGRFTKFMKKIGYRQSNS 844

Query: 179  NPNLWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGF 358
            +  L+   K   G+   L  +VDD+++TGD+ E I+  + +L  EFE+ +LG  KY+LG 
Sbjct: 845  DHTLFL--KHRCGKVTALIIYVDDMVVTGDDIEEIQRLQGQLSSEFEMKDLGNLKYFLGI 902

Query: 359  QIEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELGFDFS--XXXXXXXXXXXQNII 532
            ++ +  + + L Q+ Y   +L   G+ +  P   PIE     +             Q ++
Sbjct: 903  EVARGKDCIVLSQRKYVLDLLAETGMLDCKPVATPIEQNHQLAEYLDQVPTNKGRYQRLV 962

Query: 533  ESLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
              L+YL++TRPD+ YAV  +++F+H+P EAH++A  R+ QYL
Sbjct: 963  GRLIYLSHTRPDLAYAVSVVSQFMHNPSEAHMDAVFRILQYL 1004



 Score = 87.0 bits (214), Expect(2) = 5e-53
 Identities = 48/150 (32%), Positives = 83/150 (55%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            G+ F K  + +   YT++D+A     R+ST+GY    G   ++W S + K   R+ ++ E
Sbjct: 1011 GLIFSKYSHLDVSGYTDADWAGSITDRRSTSGYFTFVGGNLVTWKSKKQKVVARSSAEAE 1070

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YR +  G+ E L L  +  DLG    K +P++ DN+ A ++  NP+ H+ +K++EV+  F
Sbjct: 1071 YRGMARGLCEMLWLRNLLNDLGFRQKKAMPLYCDNKAAIEIAHNPVQHDRTKHVEVDRHF 1130

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRLS 1166
            I++  +   I    + T +Q  + LTK LS
Sbjct: 1131 IKEKLDGQIILFPFVPTEEQLADILTKALS 1160


>emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]
          Length = 1493

 Score =  144 bits (362), Expect(2) = 6e-53
 Identities = 72/217 (33%), Positives = 126/217 (58%), Gaps = 2/217 (0%)
 Frame = +2

Query: 14   LEEEVYMVQPLGYVQQEGLS--CKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK*NPN 187
            LEEEV+M+ P G+ ++E  +  CK +KSLY LKQ+PR W+ R  + +K +G+   + +  
Sbjct: 1102 LEEEVFMMLPPGFCKEEEETRVCKLKKSLYGLKQSPRAWFDRFAKVIKNQGYQQGQSDHT 1161

Query: 188  LWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGFQIE 367
            +++      GR  +L  +VDDII+TGD++  ++  K  L  EFE+ +LG+ +Y+LG ++ 
Sbjct: 1162 MFFKQSN-DGRMTILIVYVDDIILTGDDTGEVERLKKVLATEFEVKDLGQMRYFLGMEVA 1220

Query: 368  KDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELGFDFSXXXXXXXXXXXQNIIESLLY 547
            +    + + Q+ Y   +L   G+    P   PI+                 Q ++  L+Y
Sbjct: 1221 RSRKGISISQRKYVLDLLTETGMLGCKPSDTPIKARNRMESDGKPVDREKYQRLVGRLIY 1280

Query: 548  LTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
            L++TRPDI +AV  +++++H PKE+HL A  ++ +YL
Sbjct: 1281 LSHTRPDIAFAVSVVSQYMHSPKESHLEAVYKILRYL 1317



 Score = 92.4 bits (228), Expect(2) = 6e-53
 Identities = 52/149 (34%), Positives = 86/149 (57%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            G+ FKK D+   E+YT++D+A     R+STTGY        ++W S +     R+ ++ E
Sbjct: 1324 GLFFKKSDSKKVEIYTDADWAGXADDRRSTTGYCTYVWGNLVTWRSKKQSVVARSSAEAE 1383

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            +RA+  G+ E L L  + ++L + I  PI ++ DN+ A  +  NP+ H+ +K+IEV+  F
Sbjct: 1384 FRAVAQGMCEGLWLKKLLEELCITIELPIKLYCDNKAAISISHNPVQHDRTKHIEVDRHF 1443

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRL 1163
            I++  E+G I M  I T +Q  +  TK L
Sbjct: 1444 IKEKIEKGIICMTYIPTREQLADIFTKGL 1472


>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
          Length = 1505

 Score =  144 bits (364), Expect(2) = 1e-52
 Identities = 76/219 (34%), Positives = 125/219 (57%), Gaps = 3/219 (1%)
 Frame = +2

Query: 11   NLEEEVYMVQPLGYVQQEGLS-CKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK*NPN 187
            NLEEEVYM  P G+ +  G   CK +KSLY LKQ+PR W++R  +F+K +G++ ++ + +
Sbjct: 1112 NLEEEVYMDPPPGFDEHFGSKVCKLKKSLYGLKQSPRAWFERFTQFVKNQGYVQAQ-SDH 1170

Query: 188  LWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGFQIE 367
              ++     G+  +L  +VDDII+TGD+   +   K  L  EFEI +LG  +Y+LG ++ 
Sbjct: 1171 TMFIKHSNDGKIAILIVYVDDIILTGDHVTEMDRLKKSLALEFEIKDLGSLRYFLGMEVA 1230

Query: 368  KDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELG--FDFSXXXXXXXXXXXQNIIESL 541
            +    + + Q+ Y   +L+  G+    P   PI+       +           Q ++  L
Sbjct: 1231 RSKRGIVVSQRKYILDLLKETGMSGCRPADTPIDPNQKLGDTNDGNLVNTTRYQKLVGKL 1290

Query: 542  LYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
            +YL++TRPDI +AV  +++F+H P E HL A  R+ +YL
Sbjct: 1291 IYLSHTRPDIAFAVSIVSQFMHSPYEVHLEAVYRILRYL 1329



 Score = 90.5 bits (223), Expect(2) = 1e-52
 Identities = 49/149 (32%), Positives = 84/149 (56%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            G+ FKK +    E YT++D+A     R+ST+GY        ++W S +     R+ ++ E
Sbjct: 1336 GLFFKKSEQKTIEAYTDADWAGSVTDRRSTSGYCTYIWGNLVTWRSKKQSVXARSSAEAE 1395

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YRA+ +GV E L L  I ++L  P+  P+ ++ DN+ A  +  NP+ H+ +K++E++  F
Sbjct: 1396 YRAMAHGVCEILWLKKILEELKRPLEMPMKLYCDNKAAISIAHNPVQHDRTKHVEIDRHF 1455

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRL 1163
            I++  E   I M  + T +Q  + LTK L
Sbjct: 1456 IKEKLEASIICMPFVPTTQQIADILTKGL 1484


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  154 bits (389), Expect(2) = 2e-51
 Identities = 85/222 (38%), Positives = 131/222 (59%), Gaps = 4/222 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGYVQ--QEGLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK* 178
            H  L E+VY+ QP G+ Q  +E    K +K+LY LKQAPR WY R+  +  K+GF     
Sbjct: 791  HGELNEDVYIEQPQGFEQKGEEEKVYKLKKALYGLKQAPRAWYSRIEGYFVKEGFERCSY 850

Query: 179  NPNLWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGF 358
               L ++  E  G+ ++++ +VDD I TG++  +I++FK  +  EFE+T+LG+ KY+LG 
Sbjct: 851  EHTL-FVKIEGEGKMLIVSLYVDDQIFTGNDMSMIEKFKSSMMHEFEMTDLGEMKYFLGV 909

Query: 359  QIEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELGFDFS--XXXXXXXXXXXQNII 532
            +I + +  + L Q  Y   ++E  G+  S P + PI  G   S             + ++
Sbjct: 910  EIRQSAEGIHLCQSKYAREVIERFGMGKSNPVRNPIVPGSKLSMEAGGAVVDGTLFKQLV 969

Query: 533  ESLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
             SL+YLT TRPD+ Y VC ++RF+  P+EAHL+A KRV +YL
Sbjct: 970  GSLMYLTATRPDLIYVVCLISRFMAHPREAHLSAAKRVLRYL 1011



 Score = 77.0 bits (188), Expect(2) = 2e-51
 Identities = 45/152 (29%), Positives = 81/152 (53%)
 Frame = +3

Query: 708  TNYGVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPS 887
            T  GV +++  +     YT+SD+A D   ++ST+G++       +SW+S +    T + +
Sbjct: 1015 TELGVFYRRGVDDELVGYTDSDYAGDMDGKRSTSGFVFMLSGGAVSWSSRKQHVVTLSTT 1074

Query: 888  KVEYRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVE 1067
            + EY A      + + +  +   LG    K + +F DN    +L  NP+FH  SK+I+V 
Sbjct: 1075 EAEYVAAAGCACQSVWMRRVLNKLGYSQCKCVTMFCDNSSTIKLSKNPVFHGRSKHIDVR 1134

Query: 1068 CLFIRDLHEEGTIQMKSISTHKQKENGLTKRL 1163
              F+RDL ++G +++K   + +Q  + LTK L
Sbjct: 1135 FHFLRDLTKDGVVELKFYGSKEQIADILTKPL 1166


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  138 bits (347), Expect(2) = 3e-51
 Identities = 78/221 (35%), Positives = 125/221 (56%), Gaps = 3/221 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGYVQQE-GLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK*N 181
            H +LEEEVYM  P G+        C+ RKSLY LKQAPR W+K+L + LK+ GFI     
Sbjct: 1097 HGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGY-- 1154

Query: 182  PNLWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGFQ 361
             +  + +    G  + +  +VDD+II G++  ++++FK+ LGR F + +LGK KY+LG +
Sbjct: 1155 EDYSFFSYSCKGIELRVLVYVDDLIICGNDEYMVQKFKEYLGRCFSMKDLGKLKYFLGIE 1214

Query: 362  IEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELGFDFS--XXXXXXXXXXXQNIIE 535
            + +  + + L Q+ Y   I+   G   + P   P+E     +             + ++ 
Sbjct: 1215 VSRGPDGIFLSQRKYALDIISDSGTLGARPAYTPLEQNHHLASDDGPLLQDPKPFRRLVG 1274

Query: 536  SLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
             LLYL +TRP++ Y+V  L++F+  P+EAHL A  R+ +YL
Sbjct: 1275 RLLYLLHTRPELSYSVHVLSQFMQAPREAHLEAAMRIVRYL 1315



 Score = 92.4 bits (228), Expect(2) = 3e-51
 Identities = 46/149 (30%), Positives = 81/149 (54%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            G+      +   EVY +SDF + P+ R+S + Y+V  G + ISW + +    + + ++ E
Sbjct: 1322 GILLSSNKDLTLEVYCDSDFQSCPLTRRSLSAYVVLLGGSPISWKTKKQDTVSHSSAEAE 1381

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YRA+   + E   L  + ++LG+ +  P  +F D++ A  +  NP+FHE +K+IE +C  
Sbjct: 1382 YRAMSVALKEIKWLNKLLKELGITLAAPTRLFCDSKAAISIAANPVFHERTKHIERDCHS 1441

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRL 1163
            +RD   +G I    + T +Q  +  TK L
Sbjct: 1442 VRDAVRDGIITTHHVRTSEQLADIFTKAL 1470


>emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indica Group]
          Length = 806

 Score =  140 bits (353), Expect(2) = 4e-51
 Identities = 80/222 (36%), Positives = 127/222 (57%), Gaps = 4/222 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGYV--QQEGLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK* 178
            H +L+EEVYM  P G+   Q +G   + +KSLY LKQ+PR W+ R    +   G+     
Sbjct: 412  HGDLQEEVYMEIPPGFSTSQTKGKVLRLKKSLYGLKQSPRAWFDRFRRAMCGMGYKQCNG 471

Query: 179  NPNLWYLTKE*SGRSI-LLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLG 355
            +  L+Y  +   G+ I +LA +VDDIIITGD+++ I + K+ + +EFE+ +LG+ KY+LG
Sbjct: 472  DHTLFYRHR---GKKIAILAVYVDDIIITGDDTQEIAQLKENISKEFEVKDLGQLKYFLG 528

Query: 356  FQIEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELGFDF-SXXXXXXXXXXXQNII 532
             +I +    + L Q+ Y   +L   G+    P   PIE      +           Q ++
Sbjct: 529  IEIARSPRGIVLSQRKYVLDLLCDTGMLGCRPASTPIEQNHKLCAELGDPVNKERYQRLV 588

Query: 533  ESLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
              L+YL +TRPDI YAV  ++R++HDP+  H++A  R+ +YL
Sbjct: 589  GRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDAVYRILRYL 630



 Score = 89.7 bits (221), Expect(2) = 4e-51
 Identities = 47/150 (31%), Positives = 90/150 (60%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            G+ FKK  +   E Y ++D+A+    R+ST+GY V  G   +SW S +    +R+ ++ E
Sbjct: 637  GLWFKKNGHLGVEGYCDADWASSLDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAE 696

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YRA+   ++E L L  +  +L + +N P+ ++ DN+ A  +  NP+ H+ +K++E++  F
Sbjct: 697  YRAMSVSLSELLWLRNLLSELKLLMNIPMKLWCDNKSAISIANNPVQHDRTKHVEIDRFF 756

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRLS 1166
            I++  +EG +++  + + +Q  + LTK LS
Sbjct: 757  IKEKLDEGILKLGFVMSGEQVADCLTKALS 786


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  137 bits (346), Expect(2) = 5e-51
 Identities = 79/221 (35%), Positives = 127/221 (57%), Gaps = 3/221 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGYVQQE-GLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK*N 181
            H +LEEEVYM  P G+        C+ RKSLY LKQAPR W+K+L + L + GF+ S  +
Sbjct: 1107 HGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLLRFGFVQSYED 1166

Query: 182  PNLWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGFQ 361
             +L+  T+      +L+  +VDD++I G++  ++++FKD L R F + +LGK KY+LG +
Sbjct: 1167 YSLFSYTRNNIELRVLI--YVDDLLICGNDGYMLQKFKDYLSRCFSMKDLGKLKYFLGIE 1224

Query: 362  IEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELGFDFS--XXXXXXXXXXXQNIIE 535
            + +    + L Q+ Y   ++   G   S P   P+E     +             + ++ 
Sbjct: 1225 VSRGPEGIFLSQRKYALDVIADSGNLGSRPAHTPLEQNHHLASDDGPLLSDPKPYRRLVG 1284

Query: 536  SLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
             LLYL +TRP++ Y+V  LA+F+ +P+EAH +A  RV +YL
Sbjct: 1285 RLLYLLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVRYL 1325



 Score = 92.0 bits (227), Expect(2) = 5e-51
 Identities = 45/149 (30%), Positives = 83/149 (55%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            G+      +   EVY +SD+ + P+ R+S + Y+V  G + ISW + +    + + ++ E
Sbjct: 1332 GILLNADPDLTLEVYCDSDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAEAE 1391

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YRA+ Y + E   L  + ++LG+  + P  ++ D++ A  +  NP+FHE +K+IE +C  
Sbjct: 1392 YRAMSYALKEIKWLRKLLKELGIEQSTPARLYCDSKAAIHIAANPVFHERTKHIESDCHS 1451

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRL 1163
            +RD   +G I  + + T +Q  +  TK L
Sbjct: 1452 VRDAVRDGIITTQHVRTTEQLADVFTKAL 1480


>emb|CAN74194.1| hypothetical protein VITISV_040578 [Vitis vinifera]
          Length = 1353

 Score =  137 bits (346), Expect(2) = 9e-51
 Identities = 80/219 (36%), Positives = 121/219 (55%), Gaps = 4/219 (1%)
 Frame = +2

Query: 14   LEEEVYMVQP--LGYVQQEGLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK*NPN 187
            LEEEVYM  P  +   +  G  CK RKSLY LKQ+PR W+ RL   +KK GFI  + +  
Sbjct: 960  LEEEVYMKIPPSMETPENSGKVCKLRKSLYSLKQSPRAWFDRLTRVVKKHGFIQCQADHT 1019

Query: 188  LWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGFQIE 367
            L ++     G   L   +VDD+IITGD+ E I   K  L REFEI +LG+ +Y+L  ++ 
Sbjct: 1020 L-FMKHSKEGEMTLFIVYVDDVIITGDDEEGIGNLKKLLAREFEIKDLGQLRYFLSMEVG 1078

Query: 368  KDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIE-LG-FDFSXXXXXXXXXXXQNIIESL 541
            +    + + Q+ Y   + +  G+    P   P++ +G  D             Q ++  L
Sbjct: 1079 RTKEGIVVTQRKYVLDLHQETGMLGCKPVDTPMDPIGKIDKDNDSHPTDKDRYQRLVGKL 1138

Query: 542  LYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
            +YLT+TRPDI +AV  ++R++++P E H+ A  R+  YL
Sbjct: 1139 IYLTHTRPDIGFAVSIVSRYMNNPTERHMKAVYRILXYL 1177



 Score = 91.3 bits (225), Expect(2) = 9e-51
 Identities = 48/149 (32%), Positives = 87/149 (58%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            G+ FKK  +   EV+T++D+A     ++STTGY        ++W S +     R+ ++VE
Sbjct: 1184 GLYFKKTSSREVEVFTDADWAGSLTNQRSTTGYCSYVWGNLVTWRSKKQSIVARSSAEVE 1243

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            +RA+ +G+ E + L  I ++LG+  N  + V  DN+    +  NP+ H+ +K++E++  F
Sbjct: 1244 FRAMAHGICEGMWLQRILKELGIISNSTMTVLRDNKATISIAKNPVQHDRTKHVEIDRHF 1303

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRL 1163
            I++  E GTI++  I + +Q  + LTK L
Sbjct: 1304 IKEKLEGGTIRLMYIHSSRQTADILTKAL 1332


>dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. russellianum]
          Length = 1591

 Score =  129 bits (325), Expect(2) = 2e-50
 Identities = 74/222 (33%), Positives = 123/222 (55%), Gaps = 4/222 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGYVQQ--EGLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK* 178
            H  L+EEV+M  P G+ ++   G  CK  ++LY LKQ+PR W+ R  + +KK G+  S  
Sbjct: 1192 HGTLKEEVFMDPPPGFSKEFLPGQVCKLNRALYGLKQSPRAWFGRFTQAMKKDGYRQSNA 1251

Query: 179  NPNLWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGF 358
            +  L+   K        L  +VDD+IITG+++  I   +D L  +FE+ +LG  KY+LG 
Sbjct: 1252 DHTLFI--KRQGSLVTCLIIYVDDMIITGNDANEISRLRDYLFTQFEMKDLGGLKYFLGI 1309

Query: 359  QIEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELG--FDFSXXXXXXXXXXXQNII 532
            ++ + +  + + Q+ Y   +L  +GL ++ P   P+      D             Q ++
Sbjct: 1310 EVLRSAEGIYISQRKYILDLLTEVGLLDAKPADTPMVQNHKLDIVQGAASADREQYQRLV 1369

Query: 533  ESLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
              L+YL++TRPDI YAV  +++F+H P++ HL A  R+ +YL
Sbjct: 1370 GKLIYLSHTRPDIAYAVGVVSQFMHSPQKHHLEAVFRIMRYL 1411



 Score = 98.6 bits (244), Expect(2) = 2e-50
 Identities = 48/151 (31%), Positives = 87/151 (57%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            G+ FK   + N E YT++D+A   I R+ST+GY    G   ++W S + K    + ++ E
Sbjct: 1418 GLLFKNNGHLNIEAYTDADWAGSQIDRRSTSGYFTLVGGNVVTWRSKKQKVVALSSAEAE 1477

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YR I  GV+E L +  + Q+LG P+  P  +  DN+ +  +  NP+ H+ +K++E++  F
Sbjct: 1478 YRGIVKGVSEVLWIRKLLQELGFPVTDPTCLMCDNKASISISENPVQHDRTKHVEIDRHF 1537

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRLSG 1169
            +++  E+G I +  + +  Q  + LTK ++G
Sbjct: 1538 VKEKIEDGIIALPHVRSEDQLADILTKAVNG 1568


>emb|CAN72440.1| hypothetical protein VITISV_039162 [Vitis vinifera]
          Length = 1253

 Score =  134 bits (338), Expect(2) = 2e-50
 Identities = 77/222 (34%), Positives = 125/222 (56%), Gaps = 4/222 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGYVQQ--EGLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK* 178
            H +L EEVYM QP G+V Q   GL C+ R+SLY LKQ+PR W+ R    +++ G + S  
Sbjct: 857  HGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTA 916

Query: 179  NPNLWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGF 358
            + +++Y      G+ I L  +VDDI+ITG + + I++ K  L   F+  +LGK KY+LG 
Sbjct: 917  DHSVFYHHNS-LGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGI 975

Query: 359  QIEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIE--LGFDFSXXXXXXXXXXXQNII 532
            +I + S+ + L Q+ Y   ILE  G+ +  P   P++  +                + ++
Sbjct: 976  EIAQSSSXVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVXGQGEPLGDPGRYRRLV 1035

Query: 533  ESLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
              L YLT TRPDI + V  +++F+  P ++H +A  R+ +Y+
Sbjct: 1036 GKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYI 1077



 Score = 93.6 bits (231), Expect(2) = 2e-50
 Identities = 48/151 (31%), Positives = 84/151 (55%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            GV ++ + +     YT++D+   P  R+ST+GY V  G   ISW S +     R+ ++ E
Sbjct: 1084 GVLYENRGHTQVVGYTDADWVGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVARSSAEAE 1143

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YRA+     E + L ++ Q+L    ++ + + +DN+ A  +  NP+FHE +K+IEV+C F
Sbjct: 1144 YRAMALATCELIWLRHLLQELRFGKDEQMKLIYDNQAALHIASNPVFHERTKHIEVDCHF 1203

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRLSG 1169
            IR+    G +    ++++ Q  +  TK L G
Sbjct: 1204 IREKIASGCVATSFVNSNDQLADIFTKSLRG 1234


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  127 bits (319), Expect(2) = 3e-50
 Identities = 75/221 (33%), Positives = 119/221 (53%), Gaps = 3/221 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGY-VQQEGLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK*N 181
            H +L+EEVYM  P G+        C+  KSLY LKQAPR W+ +L   LK+ GF  S  +
Sbjct: 1074 HGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSD 1133

Query: 182  PNLWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGFQ 361
             +L+    +  G  + +  +VDD+II+G   + + +FK  L   F + +LG  KY+LG +
Sbjct: 1134 YSLFSYNND--GIFVHVLVYVDDLIISGSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIE 1191

Query: 362  IEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELG--FDFSXXXXXXXXXXXQNIIE 535
            + +++    L Q+ Y   I+  MGL  + P   P+E       S           + ++ 
Sbjct: 1192 VSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVG 1251

Query: 536  SLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
             L+YL  TRP++ Y+V  LA+F+ +P++ H NA  RV +YL
Sbjct: 1252 RLIYLVVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYL 1292



 Score =  100 bits (248), Expect(2) = 3e-50
 Identities = 52/149 (34%), Positives = 84/149 (56%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            G+            + +SD+A  P+ R+S TGY V+ G+  ISW + +    +R+ ++ E
Sbjct: 1299 GILLSSTSTLQINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAE 1358

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YRA+ +   E + L  +  DLGV   + + +F D++ A  L VNP+ HE +K++EV+C F
Sbjct: 1359 YRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHF 1418

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRL 1163
            IRD   +G I    + +HKQ  + LTK L
Sbjct: 1419 IRDAILDGIIATSFVPSHKQLADILTKAL 1447


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  127 bits (319), Expect(2) = 3e-50
 Identities = 75/221 (33%), Positives = 119/221 (53%), Gaps = 3/221 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGY-VQQEGLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK*N 181
            H +L+EEVYM  P G+        C+  KSLY LKQAPR W+ +L   LK+ GF  S  +
Sbjct: 715  HGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSD 774

Query: 182  PNLWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGFQ 361
             +L+    +  G  + +  +VDD+II+G   + + +FK  L   F + +LG  KY+LG +
Sbjct: 775  YSLFSYNND--GVFVHVLVYVDDLIISGSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIE 832

Query: 362  IEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELG--FDFSXXXXXXXXXXXQNIIE 535
            + +++    L Q+ Y   I+  MGL  + P   P+E       S           + ++ 
Sbjct: 833  VSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVG 892

Query: 536  SLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
             L+YL  TRP++ Y+V  LA+F+ +P++ H NA  RV +YL
Sbjct: 893  RLIYLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYL 933



 Score =  100 bits (248), Expect(2) = 3e-50
 Identities = 52/149 (34%), Positives = 84/149 (56%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            G+            + +SD+A  P+ R+S TGY V+ G+  ISW + +    +R+ ++ E
Sbjct: 940  GILLSSTSTLQINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAE 999

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YRA+ +   E + L  +  DLGV   + + +F D++ A  L VNP+ HE +K++EV+C F
Sbjct: 1000 YRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHF 1059

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRL 1163
            IRD   +G I    + +HKQ  + LTK L
Sbjct: 1060 IRDAILDGIIATSFVPSHKQLADILTKAL 1088


>emb|CAN72663.1| hypothetical protein VITISV_031849 [Vitis vinifera]
          Length = 912

 Score =  134 bits (336), Expect(2) = 3e-50
 Identities = 77/222 (34%), Positives = 124/222 (55%), Gaps = 4/222 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGYVQQ--EGLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK* 178
            H +L EEVYM QP G+V Q   GL C+ R+SLY LKQ+PR W+ R    +++ G + S  
Sbjct: 516  HGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTA 575

Query: 179  NPNLWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGF 358
            + +++Y      G+ I L  +VDDI+ITG + + I++ K  L   F+  +LGK KY+LG 
Sbjct: 576  DHSVFYHHNS-LGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGI 634

Query: 359  QIEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELGFDF--SXXXXXXXXXXXQNII 532
            +I + S+ + L Q+ Y   ILE  G+ +  P   P++                   + ++
Sbjct: 635  EIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLV 694

Query: 533  ESLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
              L YLT TRPDI + V  +++F+  P ++H +A  R+ +Y+
Sbjct: 695  GKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYI 736



 Score = 93.6 bits (231), Expect(2) = 3e-50
 Identities = 50/151 (33%), Positives = 84/151 (55%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            GV ++ + +     YT++D+A  P  R+ST+GY V  G   ISW S +     R+ ++ E
Sbjct: 743  GVLYQNRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVARSSAEAE 802

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YRA+     E + L ++ Q+L    ++ + +  DN+ A  +  NP+FHE +K+IEV+C F
Sbjct: 803  YRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASNPVFHERTKHIEVDCHF 862

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRLSG 1169
            IR+    G I    ++++ Q  +  TK L G
Sbjct: 863  IREKIASGCIATSFVNSNDQLADIFTKSLRG 893


>emb|CAN72018.1| hypothetical protein VITISV_001841 [Vitis vinifera]
          Length = 1225

 Score =  134 bits (336), Expect(2) = 3e-50
 Identities = 77/222 (34%), Positives = 124/222 (55%), Gaps = 4/222 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGYVQQ--EGLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK* 178
            H +L EEVYM QP G+V Q   GL C+ R+SLY LKQ+PR W+ R    +++ G + S  
Sbjct: 829  HGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTA 888

Query: 179  NPNLWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGF 358
            + +++Y      G+ I L  +VDDI+ITG + + I++ K  L   F+  +LGK KY+LG 
Sbjct: 889  DHSVFYHHNS-LGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGI 947

Query: 359  QIEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELGFDF--SXXXXXXXXXXXQNII 532
            +I + S+ + L Q+ Y   ILE  G+ +  P   P++                   + ++
Sbjct: 948  EIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLV 1007

Query: 533  ESLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
              L YLT TRPDI + V  +++F+  P ++H +A  R+ +Y+
Sbjct: 1008 GKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYI 1049



 Score = 93.2 bits (230), Expect(2) = 3e-50
 Identities = 49/151 (32%), Positives = 84/151 (55%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            GV ++ + +     YT++D+A  P  R+ST+GY V  G   ISW S +     R+ ++ E
Sbjct: 1056 GVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVARSSAEAE 1115

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YRA+     E + L ++ Q+L    ++ + +  DN+ A  +  NP+FHE +K+IEV+C F
Sbjct: 1116 YRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASNPVFHERTKHIEVDCHF 1175

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRLSG 1169
            IR+    G +    ++++ Q  +  TK L G
Sbjct: 1176 IREKIASGCVATSFVNSNDQLADIFTKSLRG 1206


>emb|CAN70689.1| hypothetical protein VITISV_012155 [Vitis vinifera]
          Length = 1199

 Score =  134 bits (336), Expect(2) = 3e-50
 Identities = 77/222 (34%), Positives = 124/222 (55%), Gaps = 4/222 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGYVQQ--EGLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK* 178
            H +L EEVYM QP G+V Q   GL C+ R+SLY LKQ+PR W+ R    +++ G + S  
Sbjct: 421  HGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTA 480

Query: 179  NPNLWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGF 358
            + +++Y      G+ I L  +VDDI+ITG + + I++ K  L   F+  +LGK KY+LG 
Sbjct: 481  DHSVFYHHNS-LGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGI 539

Query: 359  QIEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELGFDF--SXXXXXXXXXXXQNII 532
            +I + S+ + L Q+ Y   ILE  G+ +  P   P++                   + ++
Sbjct: 540  EIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLV 599

Query: 533  ESLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
              L YLT TRPDI + V  +++F+  P ++H +A  R+ +Y+
Sbjct: 600  GKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYI 641



 Score = 93.2 bits (230), Expect(2) = 3e-50
 Identities = 49/151 (32%), Positives = 84/151 (55%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            GV ++ + +     YT++D+A  P  R+ST+GY V  G   ISW S +     R+ ++ E
Sbjct: 648  GVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVARSSAEAE 707

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YRA+     E + L ++ Q+L    ++ + +  DN+ A  +  NP+FHE +K+IEV+C F
Sbjct: 708  YRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASNPVFHERTKHIEVDCHF 767

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRLSG 1169
            IR+    G +    ++++ Q  +  TK L G
Sbjct: 768  IREKIASGCVATSFVNSNDQLADIFTKSLRG 798


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
            gi|7269049|emb|CAB79159.1| LTR retrotransposon like
            protein [Arabidopsis thaliana]
          Length = 1109

 Score =  127 bits (319), Expect(2) = 3e-50
 Identities = 75/221 (33%), Positives = 119/221 (53%), Gaps = 3/221 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGY-VQQEGLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK*N 181
            H +L+EEVYM  P G+        C+  KSLY LKQAPR W+ +L   LK+ GF  S  +
Sbjct: 715  HGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSD 774

Query: 182  PNLWYLTKE*SGRSILLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLGFQ 361
             +L+    +  G  + +  +VDD+II+G   + + +FK  L   F + +LG  KY+LG +
Sbjct: 775  YSLFSYNND--GVFVHVLVYVDDLIISGSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIE 832

Query: 362  IEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELG--FDFSXXXXXXXXXXXQNIIE 535
            + +++    L Q+ Y   I+  MGL  + P   P+E       S           + ++ 
Sbjct: 833  VSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVG 892

Query: 536  SLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
             L+YL  TRP++ Y+V  LA+F+ +P++ H NA  RV +YL
Sbjct: 893  RLIYLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYL 933



 Score = 99.8 bits (247), Expect(2) = 3e-50
 Identities = 52/149 (34%), Positives = 84/149 (56%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            G+            + +SD+A  P+ R+S TGY V+ G+  ISW + +    +R+ ++ E
Sbjct: 940  GILLSSTSTLQINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTISRSSAEAE 999

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YRA+ +   E + L  +  DLGV   + + +F D++ A  L VNP+ HE +K++EV+C F
Sbjct: 1000 YRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHF 1059

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRL 1163
            IRD   +G I    + +HKQ  + LTK L
Sbjct: 1060 IRDAILDGIIATSFVPSHKQLADILTKAL 1088


>emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group]
          Length = 1262

 Score =  134 bits (338), Expect(2) = 5e-50
 Identities = 77/222 (34%), Positives = 123/222 (55%), Gaps = 4/222 (1%)
 Frame = +2

Query: 5    HRNLEEEVYMVQPLGY--VQQEGLSCKQRKSLYELKQAPRTWYKRLIEFLKKKGFIMSK* 178
            H +L+EEVYM  P G+  +Q +G   + +KSLY LKQ+PR W+ R    +   G+     
Sbjct: 868  HGDLQEEVYMEIPPGFATLQTKGKVLRLKKSLYGLKQSPRAWFDRFRRAMCAMGYKQCNG 927

Query: 179  NPNLWYLTKE*SGRSI-LLAFHVDDIIITGDNSELIKEFKDELGREFEITNLGKAKYYLG 355
            +  ++Y     SG  I +LA +VDD+IITG++   I   K  L +EFE+ +LG+ KY+LG
Sbjct: 928  DHTVFY---HHSGDHITILAVYVDDMIITGNDCSEITRLKQNLSKEFEVKDLGQLKYFLG 984

Query: 356  FQIEKDSNFLKLHQKYYTEHILEIMGLQNS*PKQIPIELGFDF-SXXXXXXXXXXXQNII 532
             +I +    + L Q+ Y   +L   G+    P   P++      +           Q ++
Sbjct: 985  IEIARSPRGIVLSQRKYALDLLSDTGMLGCRPASTPVDQNHKLCAESGNPVNKERYQRLV 1044

Query: 533  ESLLYLTNTRPDIHYAVCFLARFIHDPKEAHLNATKRVCQYL 658
              L+YL +TRPDI YAV  ++R++HDP+  H++A  R+ +YL
Sbjct: 1045 GRLIYLCHTRPDITYAVSMVSRYMHDPRSGHMDAVYRILRYL 1086



 Score = 92.0 bits (227), Expect(2) = 5e-50
 Identities = 46/149 (30%), Positives = 90/149 (60%)
 Frame = +3

Query: 717  GVKFKKKDNFNFEVYTNSDFANDPIKRKSTTGYLVKFGEATISWASFR*KRTTRNPSKVE 896
            G+ FKK  +   E Y ++D+A+ P  R+ST+GY V  G   +SW S +    +R+ ++ E
Sbjct: 1093 GLWFKKNGHLEVEGYCDADWASCPDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAE 1152

Query: 897  YRAIGYGVNEFL*LIYIAQDLGVPINKPIPVFHDNELAKQLVVNPIFHENSKYIEVECLF 1076
            YRA+   ++E L L  +  +L +P++ P+ ++ DN+ A  +  NP+ H+ +K++E++  F
Sbjct: 1153 YRAMSVSLSELLWLRNLLSELMLPVDTPMKLWCDNKSAISIANNPVQHDRTKHVELDRFF 1212

Query: 1077 IRDLHEEGTIQMKSISTHKQKENGLTKRL 1163
            I++  +EG ++++ + +  Q  +  TK L
Sbjct: 1213 IKEKLDEGVLELEFVMSGGQVADCFTKGL 1241