BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00011487
         (498 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [A...    97   2e-18
ref|XP_003061521.1| predicted protein [Micromonas pusilla CCMP15...    94   2e-17
ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotei...    92   9e-17
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...    92   9e-17
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...    92   9e-17
ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotei...    91   1e-16
ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotei...    91   2e-16
ref|XP_006428571.1| hypothetical protein CICLE_v100108902mg, par...    91   2e-16
ref|XP_001757495.1| predicted protein [Physcomitrella patens] gi...    91   2e-16
ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase ...    89   5e-16
ref|XP_002509235.1| predicted protein [Micromonas sp. RCC299] gi...    88   1e-15
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...    88   1e-15
gb|EOY19725.1| U5 small nuclear ribonucleoprotein helicase, puta...    88   1e-15
gb|EOY19724.1| U5 small nuclear ribonucleoprotein helicase, puta...    88   1e-15
gb|AAL24152.2| putative ATP-dependent RNA helicase [Arabidopsis ...    87   2e-15
ref|NP_181756.1| U5 small nuclear ribonucleoprotein helicase [Ar...    87   2e-15
gb|EXB36921.1| U5 small nuclear ribonucleoprotein 200 kDa helica...    87   2e-15
ref|XP_002318725.2| U5 small nuclear ribonucleoprotein helicase ...    87   2e-15
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...    87   2e-15
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]    87   2e-15

>ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [Amborella trichopoda]
            gi|548853523|gb|ERN11506.1| hypothetical protein
            AMTR_s00022p00114710 [Amborella trichopoda]
          Length = 2171

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 45/57 (78%), Positives = 52/57 (91%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAMEED 173
            AIKRV+LQRK+KVKLEF AP +VG+K YTL+FMCDSYLGCDQEY FTI+V+EAME D
Sbjct: 2110 AIKRVSLQRKSKVKLEFPAPSEVGKKEYTLYFMCDSYLGCDQEYNFTIDVKEAMEGD 2166


>ref|XP_003061521.1| predicted protein [Micromonas pusilla CCMP1545]
            gi|226456851|gb|EEH54151.1| predicted protein [Micromonas
            pusilla CCMP1545]
          Length = 2203

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 45/55 (81%), Positives = 47/55 (85%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAME 167
            AIKRVAL RK KVKLEF AP D GE  YTLFFMCDSYLGCDQEYEFT+NV+EA E
Sbjct: 2135 AIKRVALGRKQKVKLEFQAPADAGEVEYTLFFMCDSYLGCDQEYEFTLNVKEAEE 2189


>ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Solanum tuberosum]
          Length = 2174

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 41/57 (71%), Positives = 49/57 (85%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAMEED 173
            AIKRV LQRK+KVKL+F AP + G + YTL+FMCDSYLGCDQEY FT++V+EAM ED
Sbjct: 2116 AIKRVTLQRKSKVKLDFAAPAEAGTRNYTLYFMCDSYLGCDQEYNFTLDVKEAMAED 2172


>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
            200 kDa helicase-like [Cucumis sativus]
          Length = 2175

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 41/57 (71%), Positives = 50/57 (87%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAMEED 173
            AIKRV+LQRKAKVKL+F AP D G+K+YTL+FMCDSYLGCDQEY FT++V++A   D
Sbjct: 2116 AIKRVSLQRKAKVKLDFTAPADTGKKSYTLYFMCDSYLGCDQEYSFTVDVKDAAAFD 2172


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Cucumis sativus]
          Length = 2175

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 41/57 (71%), Positives = 50/57 (87%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAMEED 173
            AIKRV+LQRKAKVKL+F AP D G+K+YTL+FMCDSYLGCDQEY FT++V++A   D
Sbjct: 2116 AIKRVSLQRKAKVKLDFTAPADTGKKSYTLYFMCDSYLGCDQEYSFTVDVKDAAAFD 2172


>ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Solanum lycopersicum]
          Length = 2174

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 41/57 (71%), Positives = 49/57 (85%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAMEED 173
            AIKRV LQRK+KVKL+F AP + G + YTL+FMCDSYLGCDQEY FT++V+EAM ED
Sbjct: 2116 AIKRVTLQRKSKVKLDFAAPAEAGMRNYTLYFMCDSYLGCDQEYNFTLDVKEAMAED 2172


>ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            isoform X1 [Citrus sinensis]
            gi|568853532|ref|XP_006480406.1| PREDICTED: U5 small
            nuclear ribonucleoprotein 200 kDa helicase-like isoform
            X2 [Citrus sinensis]
          Length = 2179

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 40/56 (71%), Positives = 51/56 (91%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAMEE 170
            AIKRV+LQRK++VKL+F AP + G+KTYTL+FMCDSY+GCDQEY FT++V+EA EE
Sbjct: 2124 AIKRVSLQRKSRVKLDFAAPAEAGKKTYTLYFMCDSYMGCDQEYAFTVDVKEAGEE 2179


>ref|XP_006428571.1| hypothetical protein CICLE_v100108902mg, partial [Citrus
           clementina] gi|557530628|gb|ESR41811.1| hypothetical
           protein CICLE_v100108902mg, partial [Citrus clementina]
          Length = 249

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 40/56 (71%), Positives = 51/56 (91%)
 Frame = +3

Query: 3   AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAMEE 170
           AIKRV+LQRK++VKL+F AP + G+KTYTL+FMCDSY+GCDQEY FT++V+EA EE
Sbjct: 194 AIKRVSLQRKSRVKLDFAAPAEAGKKTYTLYFMCDSYMGCDQEYAFTVDVKEAGEE 249


>ref|XP_001757495.1| predicted protein [Physcomitrella patens] gi|162691189|gb|EDQ77552.1|
            predicted protein [Physcomitrella patens]
          Length = 2180

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 40/57 (70%), Positives = 51/57 (89%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAMEED 173
            AIKRV+LQR++KVKL+F AP +VG KTYTLFFMCD+YLGCDQE EFTI+V+E ++ +
Sbjct: 2116 AIKRVSLQRRSKVKLDFTAPNEVGRKTYTLFFMCDAYLGCDQENEFTIDVKEGVDAE 2172


>ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
            gi|222869248|gb|EEF06379.1| U5 small nuclear
            ribonucleoprotein helicase [Populus trichocarpa]
          Length = 2157

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 41/57 (71%), Positives = 48/57 (84%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAMEED 173
            AIKRV+LQRK+KVKLEF AP D G K+YTL+FMCDSYLGCDQEY F+++V EA   D
Sbjct: 2095 AIKRVSLQRKSKVKLEFAAPADTGRKSYTLYFMCDSYLGCDQEYNFSVDVGEAAGPD 2151


>ref|XP_002509235.1| predicted protein [Micromonas sp. RCC299] gi|226524513|gb|ACO70493.1|
            predicted protein [Micromonas sp. RCC299]
          Length = 2072

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 42/53 (79%), Positives = 44/53 (83%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEA 161
            AIKRV L RK KVKLEF AP + G   YTLFFMCDSYLGCDQEYEFT+NVQEA
Sbjct: 2005 AIKRVNLGRKQKVKLEFQAPSEPGNVDYTLFFMCDSYLGCDQEYEFTLNVQEA 2057


>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
            putative [Ricinus communis]
          Length = 1809

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 39/53 (73%), Positives = 47/53 (88%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEA 161
            AIKRV+LQRK+KVKLEF AP + G K+YTL+FMCDSYLGCDQEY F ++V+EA
Sbjct: 1751 AIKRVSLQRKSKVKLEFAAPSETGRKSYTLYFMCDSYLGCDQEYSFNVDVKEA 1803


>gb|EOY19725.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 2
            [Theobroma cacao]
          Length = 2062

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 40/57 (70%), Positives = 47/57 (82%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAMEED 173
            AIKRV+LQRKAKVKLEF AP +  +K YTL+FMCDSYLGCDQEY FT++ +EA   D
Sbjct: 2000 AIKRVSLQRKAKVKLEFAAPTEAAKKAYTLYFMCDSYLGCDQEYNFTVDAKEAAGPD 2056


>gb|EOY19724.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
            [Theobroma cacao]
          Length = 2176

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 40/57 (70%), Positives = 47/57 (82%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAMEED 173
            AIKRV+LQRKAKVKLEF AP +  +K YTL+FMCDSYLGCDQEY FT++ +EA   D
Sbjct: 2114 AIKRVSLQRKAKVKLEFAAPTEAAKKAYTLYFMCDSYLGCDQEYNFTVDAKEAAGPD 2170


>gb|AAL24152.2| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
          Length = 617

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 38/57 (66%), Positives = 49/57 (85%)
 Frame = +3

Query: 3   AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAMEED 173
           AIKR++LQRKA+VKLEF  P + GEK+YTL+FMCDSYLGCDQEY FT++V+++   D
Sbjct: 557 AIKRISLQRKAQVKLEFAVPTETGEKSYTLYFMCDSYLGCDQEYSFTVDVKDSDAAD 613


>ref|NP_181756.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
            gi|2673917|gb|AAB88651.1| putative ATP-dependent RNA
            helicase [Arabidopsis thaliana]
            gi|330255004|gb|AEC10098.1| U5 small nuclear
            ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2172

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 38/57 (66%), Positives = 49/57 (85%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAMEED 173
            AIKR++LQRKA+VKLEF  P + GEK+YTL+FMCDSYLGCDQEY FT++V+++   D
Sbjct: 2112 AIKRISLQRKAQVKLEFAVPTETGEKSYTLYFMCDSYLGCDQEYSFTVDVKDSDAAD 2168


>gb|EXB36921.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Morus notabilis]
          Length = 2183

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 38/51 (74%), Positives = 47/51 (92%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQ 155
            AIKRV+LQRK+KVKL+F AP D G+K+YTL+FMCDSYLGCDQEY FT++V+
Sbjct: 2122 AIKRVSLQRKSKVKLDFTAPLDAGKKSYTLYFMCDSYLGCDQEYPFTVDVK 2172


>ref|XP_002318725.2| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
            gi|550326778|gb|EEE96945.2| U5 small nuclear
            ribonucleoprotein helicase [Populus trichocarpa]
          Length = 2186

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 40/57 (70%), Positives = 47/57 (82%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAMEED 173
            AIKRV+LQRK+KVKLEF AP D G  +YTL+FMCDSYLGCDQEY F+++V EA   D
Sbjct: 2124 AIKRVSLQRKSKVKLEFAAPTDAGRMSYTLYFMCDSYLGCDQEYNFSVDVGEAAGPD 2180


>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/59 (69%), Positives = 49/59 (83%), Gaps = 2/59 (3%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAM--EED 173
            AIKRVALQRK+KVKLEF  P + G K+YTL+FMCDSYLGCDQEY F+++V +A   EED
Sbjct: 2118 AIKRVALQRKSKVKLEFAVPAEAGRKSYTLYFMCDSYLGCDQEYSFSVDVMDASGPEED 2176


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/59 (69%), Positives = 49/59 (83%), Gaps = 2/59 (3%)
 Frame = +3

Query: 3    AIKRVALQRKAKVKLEFNAPQDVGEKTYTLFFMCDSYLGCDQEYEFTINVQEAM--EED 173
            AIKRVALQRK+KVKLEF  P + G K+YTL+FMCDSYLGCDQEY F+++V +A   EED
Sbjct: 2085 AIKRVALQRKSKVKLEFAVPAEAGRKSYTLYFMCDSYLGCDQEYSFSVDVMDASGPEED 2143