BLASTX nr result

ID: Ephedra26_contig00011217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00011217
         (621 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006858635.1| hypothetical protein AMTR_s00066p00041260 [A...    43   8e-08

>ref|XP_006858635.1| hypothetical protein AMTR_s00066p00041260 [Amborella trichopoda]
           gi|548862746|gb|ERN20102.1| hypothetical protein
           AMTR_s00066p00041260 [Amborella trichopoda]
          Length = 1046

 Score = 43.1 bits (100), Expect(3) = 8e-08
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = +2

Query: 2   DVIAYTTMIDGFERGRKLNQALKILEEMKIKYCAPNAIT 118
           +V+ YT MIDG+ +  K++  LK+L EM  K CAPN +T
Sbjct: 791 NVVTYTAMIDGYGKVGKVDLGLKLLREMAEKGCAPNIVT 829



 Score = 33.1 bits (74), Expect(3) = 8e-08
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +3

Query: 267  PLIASYVILLDHLSKVRYLESVLDFQKEII*LSSKLDT-SDISSYAMLIEALCKFGSKGC 443
            P++ +Y IL+D L K   LE  L+  KE++ +S+     +  ++Y+ LIE L   G    
Sbjct: 893  PMVPAYSILIDSLCKAGRLEVALELHKEMVSVSTVQPCFAQKTAYSSLIEGLSLAGKIEK 952

Query: 444  IFE 452
             FE
Sbjct: 953  AFE 955



 Score = 25.4 bits (54), Expect(3) = 8e-08
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = +1

Query: 142 EMKNTC*PIDGKQHTDMISGASQAFSTSHELLQEVSYFTKCP 267
           EMK T  P       D+I G S  F  S  LL E+S +   P
Sbjct: 852 EMKQTYWPPHALWFKDVIQGFSIEFINSLGLLHEISEYNMFP 893


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