BLASTX nr result
ID: Ephedra26_contig00011079
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra26_contig00011079 (426 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Popu... 174 1e-41 ref|XP_002305137.1| predicted protein [Populus trichocarpa] 174 1e-41 gb|ADE76913.1| unknown [Picea sitchensis] 172 3e-41 ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II su... 172 5e-41 ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 171 7e-41 ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 171 9e-41 ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 171 9e-41 gb|AAZ08467.1| RNA polymerase II second largest subunit [Linanth... 171 9e-41 gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia... 171 9e-41 gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not... 171 1e-40 ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su... 171 1e-40 ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su... 170 2e-40 gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh... 170 2e-40 ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago trunca... 169 3e-40 ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [A... 169 3e-40 ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su... 169 3e-40 gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 169 3e-40 gb|AAY89346.1| RNA polymerase II second largest subunit [Nicotia... 169 3e-40 gb|ESW20162.1| hypothetical protein PHAVU_006G185800g [Phaseolus... 168 6e-40 gb|EMJ15758.1| hypothetical protein PRUPE_ppa000425mg [Prunus pe... 168 6e-40 >ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Populus trichocarpa] gi|550340301|gb|EEE85647.2| hypothetical protein POPTR_0004s04320g [Populus trichocarpa] Length = 1215 Score = 174 bits (440), Expect = 1e-41 Identities = 79/102 (77%), Positives = 90/102 (88%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 1110 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCK 1169 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQVH+PYACKLLFQELMAMAI PR+ TKD+K+ K+QK Sbjct: 1170 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDIKQAKSQK 1211 >ref|XP_002305137.1| predicted protein [Populus trichocarpa] Length = 421 Score = 174 bits (440), Expect = 1e-41 Identities = 79/102 (77%), Positives = 90/102 (88%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 316 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCK 375 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQVH+PYACKLLFQELMAMAI PR+ TKD+K+ K+QK Sbjct: 376 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDIKQAKSQK 417 >gb|ADE76913.1| unknown [Picea sitchensis] Length = 135 Score = 172 bits (437), Expect = 3e-41 Identities = 78/102 (76%), Positives = 90/102 (88%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK + C GC Sbjct: 29 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCK 88 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQVH+PYACKLLFQELMAMAI PR++TK++K++K QK Sbjct: 89 NKTDIVQVHIPYACKLLFQELMAMAIAPRMFTKEVKELKDQK 130 >ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Fragaria vesca subsp. vesca] Length = 1191 Score = 172 bits (435), Expect = 5e-41 Identities = 79/102 (77%), Positives = 89/102 (87%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 1087 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCK 1146 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQVH+PYACKLLFQELMAMAI PR+ TKD+K IK +K Sbjct: 1147 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKPIKDKK 1188 >ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis] gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis] Length = 1194 Score = 171 bits (434), Expect = 7e-41 Identities = 79/102 (77%), Positives = 88/102 (86%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 1089 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCK 1148 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQVH+PYACKLLFQELMAMAI PR+ TKD+K K QK Sbjct: 1149 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKPTKDQK 1190 >ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum tuberosum] Length = 1191 Score = 171 bits (433), Expect = 9e-41 Identities = 79/102 (77%), Positives = 88/102 (86%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 1086 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCK 1145 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQVH+PYACKLLFQELMAMAI PR+ TKD+K K QK Sbjct: 1146 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKLAKDQK 1187 >ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum] gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName: Full=DNA-directed RNA polymerase II subunit RPB2; Short=RNA polymerase II subunit 2; Short=RNA polymerase II subunit B2; AltName: Full=DNA-directed RNA polymerase II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA polymerase II subunit 2 [Solanum lycopersicum] Length = 1191 Score = 171 bits (433), Expect = 9e-41 Identities = 79/102 (77%), Positives = 88/102 (86%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 1086 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCK 1145 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQVH+PYACKLLFQELMAMAI PR+ TKD+K K QK Sbjct: 1146 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKLAKDQK 1187 >gb|AAZ08467.1| RNA polymerase II second largest subunit [Linanthus californicus] Length = 733 Score = 171 bits (433), Expect = 9e-41 Identities = 77/102 (75%), Positives = 89/102 (87%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGL+A+A +KK ++C GC Sbjct: 630 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLVAIANLKKNSFECRGCK 689 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQVH+PYACKLLFQELM+MAI PR+ TKD+K+ K QK Sbjct: 690 NKTDIVQVHIPYACKLLFQELMSMAIAPRMMTKDIKQAKDQK 731 >gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida] Length = 1195 Score = 171 bits (433), Expect = 9e-41 Identities = 78/102 (76%), Positives = 89/102 (87%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 1090 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCK 1149 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQVH+PYACKLLFQELMAMAI PR+ TKD+K+ + QK Sbjct: 1150 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQARDQK 1191 >gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis] Length = 1193 Score = 171 bits (432), Expect = 1e-40 Identities = 78/102 (76%), Positives = 88/102 (86%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 1088 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCK 1147 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQVH+PYACKLLFQELMAMAI PR+ TKD+K + QK Sbjct: 1148 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKPLNDQK 1189 >ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis sativus] gi|449479313|ref|XP_004155566.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis sativus] Length = 1199 Score = 171 bits (432), Expect = 1e-40 Identities = 76/102 (74%), Positives = 90/102 (88%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE CGLIA+A +KK ++C GC Sbjct: 1094 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCECCGLIAIANLKKSSFECRGCK 1153 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQV++PYACKLLFQELMAMAI PR++TK++K +K QK Sbjct: 1154 NKTDIVQVYIPYACKLLFQELMAMAIAPRMFTKEIKPLKDQK 1195 >ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer arietinum] Length = 1194 Score = 170 bits (430), Expect = 2e-40 Identities = 78/102 (76%), Positives = 89/102 (87%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 1089 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSFECRGCK 1148 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQV++PYACKLLFQELMAMAI PR+ TK++K IK QK Sbjct: 1149 NKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEIKSIKDQK 1190 >gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus] Length = 1200 Score = 170 bits (430), Expect = 2e-40 Identities = 76/102 (74%), Positives = 89/102 (87%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE CGLIA+A +KK ++C GC Sbjct: 1095 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCEQCGLIAIANLKKNSFECRGCK 1154 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQVH+PYACKLLFQELM+MAI PR+ TKD+K+ K Q+ Sbjct: 1155 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQSKEQR 1196 >ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago truncatula] gi|355478420|gb|AES59623.1| DNA-directed RNA polymerase [Medicago truncatula] Length = 1213 Score = 169 bits (429), Expect = 3e-40 Identities = 78/102 (76%), Positives = 89/102 (87%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 1108 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCK 1167 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQV++PYACKLLFQELMAMAI PR+ TK++K IK QK Sbjct: 1168 NKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEVKAIKDQK 1209 >ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [Amborella trichopoda] gi|548863150|gb|ERN20505.1| hypothetical protein AMTR_s00068p00181410 [Amborella trichopoda] Length = 1190 Score = 169 bits (428), Expect = 3e-40 Identities = 77/102 (75%), Positives = 88/102 (86%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 1081 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNSFECRGCK 1140 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + ++QVH+PYACKLLFQELMAMAI PR++TK+ KK K K Sbjct: 1141 NKTDIIQVHIPYACKLLFQELMAMAIAPRMFTKEEKKPKDHK 1182 >ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis vinifera] gi|147841183|emb|CAN72948.1| hypothetical protein VITISV_033708 [Vitis vinifera] gi|302143287|emb|CBI21848.3| unnamed protein product [Vitis vinifera] Length = 1193 Score = 169 bits (428), Expect = 3e-40 Identities = 78/102 (76%), Positives = 88/102 (86%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 1088 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCK 1147 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQVH+PYACKLLFQELMAMAI PR+ TK++K K QK Sbjct: 1148 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKEVKPPKDQK 1189 >gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum] Length = 1191 Score = 169 bits (428), Expect = 3e-40 Identities = 76/102 (74%), Positives = 89/102 (87%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE CGLIA+A +KK ++C GC Sbjct: 1086 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCK 1145 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQVH+PYACKLLFQELM+MAI PR+ TKD+K+ K +K Sbjct: 1146 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDVKQAKDKK 1187 >gb|AAY89346.1| RNA polymerase II second largest subunit [Nicotiana sylvestris] Length = 1087 Score = 169 bits (428), Expect = 3e-40 Identities = 77/99 (77%), Positives = 87/99 (87%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 989 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKSSFECRGCK 1048 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIK 128 + +VQVH+PYACKLLFQELMAMAI PR+ TKD+K+ K Sbjct: 1049 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAK 1087 >gb|ESW20162.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris] Length = 1194 Score = 168 bits (426), Expect = 6e-40 Identities = 77/102 (75%), Positives = 88/102 (86%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 1089 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCK 1148 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQV++PYACKLLFQELMAMAI PR+ TK++K K QK Sbjct: 1149 NKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEIKSAKDQK 1190 >gb|EMJ15758.1| hypothetical protein PRUPE_ppa000425mg [Prunus persica] Length = 1192 Score = 168 bits (426), Expect = 6e-40 Identities = 77/102 (75%), Positives = 88/102 (86%) Frame = -3 Query: 424 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCELCGLIAVAKIKKEEYKCTGCS 245 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+A +KK ++C GC Sbjct: 1087 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCK 1146 Query: 244 LENTVVQVHLPYACKLLFQELMAMAITPRIYTKDLKKIKAQK 119 + +VQV++PYACKLLFQELM+MAI PR+ TKD+K K QK Sbjct: 1147 NKTDIVQVYIPYACKLLFQELMSMAIAPRMLTKDIKPAKDQK 1188