BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00011014
         (460 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX19935.1| coat protein [Nandina mosaic virus]                    251   5e-65
dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus] gi...   250   2e-64
dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus]         248   6e-64
dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus]         247   1e-63
ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]...   244   9e-63
gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus]          242   3e-62
gb|ACE62921.1| coat protein [Tulip virus X]                           215   6e-54
ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BA...   213   2e-53
gb|AAW30636.1| coat protein [Tulip virus X]                           148   6e-34
ref|NP_042699.1| coat protein [Cassava common mosaic virus] gi|7...   139   5e-31
ref|YP_224088.1| coat protein [Hydrangea ringspot virus] gi|5679...   124   1e-26
gb|ADE10206.1| coat protein [Hydrangea ringspot virus]                122   5e-26
ref|YP_002647031.1| coat protein [Allium virus X] gi|224579239|g...   115   8e-24
dbj|BAA00373.1| 28.1K protein [Clover yellow mosaic virus]            113   3e-23
ref|YP_004849318.1| coat protein [Tamus red mosaic virus] gi|345...   113   3e-23
ref|YP_054406.1| coat protein [Zygocactus virus X] gi|38146351|g...   112   4e-23
ref|NP_077083.1| coat protein [Clover yellow mosaic virus] gi|11...   112   7e-23
gb|AAO85393.1| capsid protein [Cactus virus X]                        112   7e-23
gb|AAX39396.1| putative coat protein [Clover yellow mosaic virus]     111   1e-22
ref|YP_002341563.1| coat protein [Schlumbergera virus X] gi|3814...   105   6e-21

>gb|AAX19935.1| coat protein [Nandina mosaic virus]
          Length = 207

 Score =  251 bits (642), Expect = 5e-65
 Identities = 123/135 (91%), Positives = 129/135 (95%)
 Frame = -3

Query: 407 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 228
           MAL  APTTDALAAMTFQVSSPSVPTA EL TI++GLTT+G+P DGLLSHALAVVNACFD
Sbjct: 1   MALTAAPTTDALAAMTFQVSSPSVPTASELNTITQGLTTIGVPTDGLLSHALAVVNACFD 60

Query: 227 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 48
           AGSS FVTLSGPSPTATISLAQ+AGVIKVTTTLRKFCR+YAKIIWNARLARNLPPAGFAR
Sbjct: 61  AGSSTFVTLSGPSPTATISLAQIAGVIKVTTTLRKFCRFYAKIIWNARLARNLPPAGFAR 120

Query: 47  ANIKFEHRWAGFDFF 3
           ANIKFEHRWAGFDFF
Sbjct: 121 ANIKFEHRWAGFDFF 135


>dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus]
           gi|169219481|dbj|BAG12132.1| coat protein [Plantago
           asiatica mosaic virus] gi|169219487|dbj|BAG12137.1| coat
           protein [Plantago asiatica mosaic virus]
           gi|169219499|dbj|BAG12147.1| coat protein [Plantago
           asiatica mosaic virus] gi|169219505|dbj|BAG12152.1| coat
           protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  250 bits (638), Expect = 2e-64
 Identities = 122/135 (90%), Positives = 131/135 (97%)
 Frame = -3

Query: 407 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 228
           MALN+APT+DAL AMTF VSSPSVPTAEEL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1   MALNQAPTSDALNAMTFAVSSPSVPTAEELATITQGLTTLGVPADSLLSHALAVVNACFD 60

Query: 227 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 48
           AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAGFAR
Sbjct: 61  AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120

Query: 47  ANIKFEHRWAGFDFF 3
           ANIKFEHRWAGFDFF
Sbjct: 121 ANIKFEHRWAGFDFF 135


>dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  248 bits (633), Expect = 6e-64
 Identities = 121/135 (89%), Positives = 130/135 (96%)
 Frame = -3

Query: 407 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 228
           MALN+APT+DAL AMTF VSSPSVPTA EL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1   MALNQAPTSDALNAMTFDVSSPSVPTAAELATITQGLTTLGVPADSLLSHALAVVNACFD 60

Query: 227 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 48
           AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAGFAR
Sbjct: 61  AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120

Query: 47  ANIKFEHRWAGFDFF 3
           ANIKFEHRWAGFDFF
Sbjct: 121 ANIKFEHRWAGFDFF 135


>dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  247 bits (630), Expect = 1e-63
 Identities = 121/135 (89%), Positives = 130/135 (96%)
 Frame = -3

Query: 407 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 228
           MALN+APT+DAL AMTF VSSPSVPTAEEL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1   MALNQAPTSDALNAMTFAVSSPSVPTAEELATITQGLTTLGVPADSLLSHALAVVNACFD 60

Query: 227 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 48
           AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAGFAR
Sbjct: 61  AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120

Query: 47  ANIKFEHRWAGFDFF 3
           ANIKFEHRWAGFD F
Sbjct: 121 ANIKFEHRWAGFDSF 135


>ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]
           gi|1168989|sp|Q07506.1|COAT_P1AMV RecName: Full=Coat
           protein; AltName: Full=Capsid protein; Short=CP
           gi|311649|emb|CAA79765.1| capsid protein [Plantago
           asiatica mosaic virus]
          Length = 207

 Score =  244 bits (623), Expect = 9e-63
 Identities = 118/135 (87%), Positives = 127/135 (94%)
 Frame = -3

Query: 407 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 228
           MALN APT DALAAM F VSSPSVPTA+EL+TI+ GLTTLG+P D LLSHALA+VNACFD
Sbjct: 1   MALNTAPTADALAAMAFPVSSPSVPTAQELDTITSGLTTLGVPTDSLLSHALALVNACFD 60

Query: 227 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 48
           AGSS+FVTLSGPSPT TISLAQ+AGV+KVTTTLRKFCR+YAKIIWNARLARNLPPAGFAR
Sbjct: 61  AGSSSFVTLSGPSPTPTISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLARNLPPAGFAR 120

Query: 47  ANIKFEHRWAGFDFF 3
           ANIKFEHRWAGFDFF
Sbjct: 121 ANIKFEHRWAGFDFF 135


>gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  242 bits (618), Expect = 3e-62
 Identities = 117/135 (86%), Positives = 129/135 (95%)
 Frame = -3

Query: 407 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 228
           MALN+AP+ DAL AMTF VSSPSVPTA EL+TI++GLTTLG+PA+ LLSHAL+VVNACFD
Sbjct: 1   MALNQAPSPDALDAMTFAVSSPSVPTAAELDTITRGLTTLGVPAEALLSHALSVVNACFD 60

Query: 227 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 48
           AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAK IWNARL+RNLPPAGFAR
Sbjct: 61  AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKTIWNARLSRNLPPAGFAR 120

Query: 47  ANIKFEHRWAGFDFF 3
           ANIKFEHRWAGFDFF
Sbjct: 121 ANIKFEHRWAGFDFF 135


>gb|ACE62921.1| coat protein [Tulip virus X]
          Length = 207

 Score =  215 bits (547), Expect = 6e-54
 Identities = 103/135 (76%), Positives = 119/135 (88%)
 Frame = -3

Query: 407 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 228
           MALN APT +ALAAMT  VSSP+VPT  ELETI+ GLTTLG+P D L+SHALA+VNACFD
Sbjct: 1   MALNTAPTPEALAAMTLAVSSPAVPTPLELETITAGLTTLGVPTDSLISHALALVNACFD 60

Query: 227 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 48
           AGSS F TLSGPSPT+TI+LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+RN PPAGFAR
Sbjct: 61  AGSSQFTTLSGPSPTSTITLAQIAGVVKVSTTLRKFCRFYAKLIWNARLSRNQPPAGFAR 120

Query: 47  ANIKFEHRWAGFDFF 3
           A +K   +WAGFDFF
Sbjct: 121 AYVKTGQKWAGFDFF 135


>ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BAC16789.1| coat
           protein [Tulip virus X]
          Length = 207

 Score =  213 bits (542), Expect = 2e-53
 Identities = 101/135 (74%), Positives = 119/135 (88%)
 Frame = -3

Query: 407 MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 228
           MALN AP  +ALAAMT +VSSP+VPT  EL+TI+ GLTTLG+PAD L+SHALA+VNACFD
Sbjct: 1   MALNTAPNPEALAAMTLEVSSPAVPTPAELDTIAAGLTTLGVPADSLISHALALVNACFD 60

Query: 227 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 48
           AGSS F T+SGPSPT TI+LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+RN PPAGFAR
Sbjct: 61  AGSSQFTTISGPSPTPTITLAQLAGVVKVSTTLRKFCRFYAKLIWNARLSRNRPPAGFAR 120

Query: 47  ANIKFEHRWAGFDFF 3
           A +K   +WAGFDFF
Sbjct: 121 AYVKTGQKWAGFDFF 135


>gb|AAW30636.1| coat protein [Tulip virus X]
          Length = 157

 Score =  148 bits (374), Expect = 6e-34
 Identities = 67/85 (78%), Positives = 78/85 (91%)
 Frame = -3

Query: 257 ALAVVNACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLA 78
           ALA+VNACFDAGSS F TLSGPSPT  ++LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+
Sbjct: 1   ALALVNACFDAGSSQFTTLSGPSPTPAVTLAQIAGVVKVSTTLRKFCRFYAKLIWNARLS 60

Query: 77  RNLPPAGFARANIKFEHRWAGFDFF 3
           RNLPPAGFARA +K  H+WAGFDFF
Sbjct: 61  RNLPPAGFARAYVKTGHKWAGFDFF 85


>ref|NP_042699.1| coat protein [Cassava common mosaic virus] gi|773409|gb|AAC54779.1|
           coat protein [Cassava common mosaic virus]
           gi|1587827|prf||2207297E ORF 5
          Length = 229

 Score =  139 bits (349), Expect = 5e-31
 Identities = 68/134 (50%), Positives = 93/134 (69%)
 Frame = -3

Query: 404 ALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDA 225
           AL+ APT + L+ +  + +S  V +A+ L  I+    +L +P   L+ HAL +VN CFD+
Sbjct: 24  ALSTAPTDEELSRLDLKPASNLVASADALSAIAADWASLKVPTAQLMRHALDLVNFCFDS 83

Query: 224 GSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARA 45
           GSS + T+ G SPT TI  A +AG ++  TTLR+FCRYYAKIIWNAR+  N+PPAG+A A
Sbjct: 84  GSSKYTTVEGSSPTPTIPRAALAGAVRKHTTLRQFCRYYAKIIWNARVKANIPPAGYANA 143

Query: 44  NIKFEHRWAGFDFF 3
           +IK E  +AGFDFF
Sbjct: 144 HIKPEQAFAGFDFF 157


>ref|YP_224088.1| coat protein [Hydrangea ringspot virus] gi|56792009|gb|AAW30452.1|
           coat protein [Hydrangea ringspot virus]
          Length = 225

 Score =  124 bits (311), Expect = 1e-26
 Identities = 65/138 (47%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
 Frame = -3

Query: 413 STMALNKAPTT-DALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNA 237
           ST +   AP + + L  ++F V+S  VP+  EL  I+   TTLG+PA     HALA+VN 
Sbjct: 17  STPSAAFAPLSQEVLETLSFPVTSNLVPSPTELAAIADAWTTLGVPAAETTKHALALVNF 76

Query: 236 CFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAG 57
           CFD+GSSA    +G SPT TI L+ +AG +     +RKFCRY+A+ IWNARL  N PPA 
Sbjct: 77  CFDSGSSATTRFTGASPTPTIPLSALAGAVLELVPIRKFCRYFAQYIWNARLTANAPPAS 136

Query: 56  FARANIKFEHRWAGFDFF 3
           +   N     ++AGFDFF
Sbjct: 137 WEAWNFPENEKFAGFDFF 154


>gb|ADE10206.1| coat protein [Hydrangea ringspot virus]
          Length = 225

 Score =  122 bits (306), Expect = 5e-26
 Identities = 64/138 (46%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
 Frame = -3

Query: 413 STMALNKAPTT-DALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNA 237
           ST +   AP + + L  ++F V+S  VP+  EL  I+   TTLG+PA     HALA+VN 
Sbjct: 17  STPSAAFAPLSQEVLETLSFPVTSNLVPSPTELAAIADAWTTLGVPAAETTKHALALVNF 76

Query: 236 CFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAG 57
           CFD+GSSA    +G SPT  I L+ +AG +     +RKFCRY+A+ IWNARL  N PPA 
Sbjct: 77  CFDSGSSATTRFTGASPTPAIPLSALAGAVLELVPIRKFCRYFAQYIWNARLTANAPPAS 136

Query: 56  FARANIKFEHRWAGFDFF 3
           +   N     ++AGFDFF
Sbjct: 137 WEAWNFPENEKFAGFDFF 154


>ref|YP_002647031.1| coat protein [Allium virus X] gi|224579239|gb|ACN58198.1| coat
           protein [Allium virus X]
          Length = 225

 Score =  115 bits (287), Expect = 8e-24
 Identities = 59/150 (39%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
 Frame = -3

Query: 422 KTYSTMALNKA----------PTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPAD 273
           KT +T  L+KA          P  + L+AMTF +++ S+PT  EL  I++   TLG+P +
Sbjct: 4   KTAATNVLSKAVNSNAIPFTTPKPEELSAMTFTLNNRSLPTPGELIAIAEQWKTLGVPGE 63

Query: 272 GLLSHALAVVNACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIW 93
            + +HAL +   C+ +GSS    ++G S T  ++LAQ+AGV+   TTLRKFCR++A ++W
Sbjct: 64  AVTTHALQLTMFCYHSGSSPNTEITGDSATPKVTLAQLAGVVMQHTTLRKFCRFFAPLVW 123

Query: 92  NARLARNLPPAGFARANIKFEHRWAGFDFF 3
           N  L   +PPA +   N   + ++A FDFF
Sbjct: 124 NWALDHKIPPASWQANNFPPDEKYAAFDFF 153


>dbj|BAA00373.1| 28.1K protein [Clover yellow mosaic virus]
          Length = 257

 Score =  113 bits (282), Expect = 3e-23
 Identities = 59/145 (40%), Positives = 86/145 (59%)
 Frame = -3

Query: 437 DSRNFKTYSTMALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSH 258
           +S+   T +   L  APT + L  +T  + S  VP+  ELE I+K   TLG+      ++
Sbjct: 41  NSKTNMTDTKKTLFSAPTDEQLDTLTLTIESNLVPSISELEAIAKDWKTLGLQEADFTAN 100

Query: 257 ALAVVNACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLA 78
           A+ +   C+ +GSS  V + G S +  I L Q+AGV++  +TLR+FCRY+AK+IWN  L 
Sbjct: 101 AIKIAWFCYHSGSSESVQVQGNSTSDKIPLYQLAGVVRQHSTLRRFCRYFAKVIWNYALR 160

Query: 77  RNLPPAGFARANIKFEHRWAGFDFF 3
           +N PPA +A  N K   R+A FDFF
Sbjct: 161 KNQPPANWASQNYKEADRFAAFDFF 185


>ref|YP_004849318.1| coat protein [Tamus red mosaic virus] gi|345548101|gb|AEO12144.1|
           coat protein [Tamus red mosaic virus]
          Length = 221

 Score =  113 bits (282), Expect = 3e-23
 Identities = 54/131 (41%), Positives = 80/131 (61%)
 Frame = -3

Query: 395 KAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSS 216
           KAPT D L  MTF V+S  +P+ EE + IS+    LGI  D L  +A+ +   C+ +GSS
Sbjct: 20  KAPTLDRLKLMTFDVNSTLLPSTEEFKLISEDWAKLGISGDSLTENAMKLATFCYHSGSS 79

Query: 215 AFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIK 36
               + G S    +SL+++AGV+ + T+LRKFCRY+A +IWN  +   +PPA +   + K
Sbjct: 80  TTTEMRGESSKPGVSLSRLAGVVNMHTSLRKFCRYFAPLIWNIHVESKIPPAAWQSKDFK 139

Query: 35  FEHRWAGFDFF 3
              ++A FDFF
Sbjct: 140 EGEKFAAFDFF 150


>ref|YP_054406.1| coat protein [Zygocactus virus X] gi|38146351|gb|AAR11546.1| coat
           protein [Zygocactus virus X]
          Length = 226

 Score =  112 bits (281), Expect = 4e-23
 Identities = 61/128 (47%), Positives = 78/128 (60%)
 Frame = -3

Query: 386 TTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 207
           T   LAA+T  V+S  +P+ EEL  +S  LT LG  +  +   AL VVN CFD GSS   
Sbjct: 28  TAAQLAALTLGVTSSLLPSPEELVQLSNALTALGASSSNVSQVALEVVNYCFDNGSSPET 87

Query: 206 TLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEH 27
              G S    I L++VA  I   TTLR+FCRY+AK+IWN R++RNLPPA +     K E 
Sbjct: 88  VFKGNSNLLQIPLSKVAQAITQVTTLRQFCRYFAKLIWNYRVSRNLPPAAWEAWAYKPEQ 147

Query: 26  RWAGFDFF 3
           ++A FDFF
Sbjct: 148 KFAAFDFF 155


>ref|NP_077083.1| coat protein [Clover yellow mosaic virus]
           gi|116740|sp|P16486.1|COAT_CYMV RecName: Full=Coat
           protein; AltName: Full=Capsid protein; Short=CP
           gi|221222|dbj|BAA00375.1| coat protein [Clover yellow
           mosaic virus]
          Length = 212

 Score =  112 bits (279), Expect = 7e-23
 Identities = 58/139 (41%), Positives = 83/139 (59%)
 Frame = -3

Query: 419 TYSTMALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVN 240
           T +   L  APT + L  +T  + S  VP+  ELE I+K   TLG+      ++A+ +  
Sbjct: 2   TDTKKTLFSAPTDEQLDTLTLTIESNLVPSISELEAIAKDWKTLGLQEADFTANAIKIAW 61

Query: 239 ACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPA 60
            C+ +GSS  V + G S +  I L Q+AGV++  +TLR+FCRY+AK+IWN  L +N PPA
Sbjct: 62  FCYHSGSSESVQVQGNSTSDKIPLYQLAGVVRQHSTLRRFCRYFAKVIWNYALRKNQPPA 121

Query: 59  GFARANIKFEHRWAGFDFF 3
            +A  N K   R+A FDFF
Sbjct: 122 NWASQNYKEADRFAAFDFF 140


>gb|AAO85393.1| capsid protein [Cactus virus X]
          Length = 225

 Score =  112 bits (279), Expect = 7e-23
 Identities = 59/128 (46%), Positives = 81/128 (63%)
 Frame = -3

Query: 386 TTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 207
           ++  LAA++  V+S  +P+  EL +IS+ LTTLG  A  L   +L +VN CFD GSS   
Sbjct: 27  SSSQLAALSLGVTSSLLPSPAELVSISQALTTLGASATNLTPLSLEIVNYCFDNGSSPET 86

Query: 206 TLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEH 27
              G S    + L++VA  I   TTLR+FCRY+AKIIWN R+++NLPPA +     K E 
Sbjct: 87  VFKGDSAVLQMPLSKVAHAITQFTTLRQFCRYFAKIIWNYRISKNLPPAAWEAWAYKPEQ 146

Query: 26  RWAGFDFF 3
           ++A FDFF
Sbjct: 147 KFAAFDFF 154


>gb|AAX39396.1| putative coat protein [Clover yellow mosaic virus]
          Length = 164

 Score =  111 bits (277), Expect = 1e-22
 Identities = 59/139 (42%), Positives = 82/139 (58%)
 Frame = -3

Query: 419 TYSTMALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVN 240
           T +   L  APT + L  +T  + S  VP+  ELE I+K   TLG+      S+A+ +  
Sbjct: 2   TDAKKTLFSAPTDEQLDTLTLTIESNLVPSQAELEAIAKDWKTLGLQEADFSSNAIKIAW 61

Query: 239 ACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPA 60
            C+ +GSS  V + G S    I L Q+AGV++  +TLR+FCRY+AKIIWN  L +N PPA
Sbjct: 62  FCYHSGSSESVQVQGNSTLEKIPLYQLAGVVRQHSTLRRFCRYFAKIIWNYALRKNQPPA 121

Query: 59  GFARANIKFEHRWAGFDFF 3
            +A  N K   ++A FDFF
Sbjct: 122 NWASQNYKEADKFAAFDFF 140


>ref|YP_002341563.1| coat protein [Schlumbergera virus X] gi|38146345|gb|AAR11541.1|
           coat protein [Schlumbergera virus X]
          Length = 225

 Score =  105 bits (262), Expect = 6e-21
 Identities = 55/128 (42%), Positives = 75/128 (58%)
 Frame = -3

Query: 386 TTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 207
           T+  L  +   V+S  +P+ E+L TIS+   TLG     L   +L +VN CFD GSS   
Sbjct: 27  TSSQLNVLPLSVTSSLLPSPEDLVTISQAFITLGAAQTNLTQVSLELVNYCFDNGSSPET 86

Query: 206 TLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEH 27
              G S T  + L++VA  +   TTLR+FCRY+AK+IWN RL +N PPA +     K E 
Sbjct: 87  VFKGNSATLGVPLSKVANAVTQYTTLRQFCRYFAKLIWNYRLEKNKPPAAWEAWAYKPEQ 146

Query: 26  RWAGFDFF 3
           ++A FDFF
Sbjct: 147 KFAAFDFF 154