BLASTX nr result

ID: Ephedra26_contig00010953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00010953
         (611 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001774230.1| predicted protein [Physcomitrella patens] gi...    85   1e-14
ref|XP_002990837.1| hypothetical protein SELMODRAFT_429182 [Sela...    70   6e-10
ref|XP_002974354.1| hypothetical protein SELMODRAFT_442491 [Sela...    68   2e-09

>ref|XP_001774230.1| predicted protein [Physcomitrella patens]
           gi|162674498|gb|EDQ61006.1| predicted protein
           [Physcomitrella patens]
          Length = 396

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
 Frame = -2

Query: 451 QLGSHNYHQRKKRIHATTTDENAQNNKGQEPDTNISKDDXXXXXXXXXXXXXXXXXXXAS 272
           Q G      R+ R+   +++EN+         +   K+D                   A+
Sbjct: 98  QCGLVGLDNRRYRLIRASSEENSDT--ASSSTSTSEKEDLNAKLAAAEAEAEALRRELAA 155

Query: 271 RDGRE--VDFSKMKPATPERRIDGVGYRETLFSTTENTSGRKENENGKWGLSEAEL-LSK 101
           R G     D SK+KPATPE+RIDG GYRETLFS  + T G+ E +  KWGLSEAEL LSK
Sbjct: 156 RKGNRDTTDLSKLKPATPEKRIDGTGYRETLFSGPKAT-GKPEQQPSKWGLSEAELFLSK 214

Query: 100 NSEMEGTAVEDEK----SKETVRRRLIVGSAITVLSI 2
            +  EG  +  E     S + ++RRLI+G  I+ L++
Sbjct: 215 GAPTEGMGLGGEAMEAGSDKVIQRRLIIGLGISALAV 251


>ref|XP_002990837.1| hypothetical protein SELMODRAFT_429182 [Selaginella moellendorffii]
           gi|300141398|gb|EFJ08110.1| hypothetical protein
           SELMODRAFT_429182 [Selaginella moellendorffii]
          Length = 369

 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
 Frame = -2

Query: 262 REVDFSKMKPATPERRIDGVGYRETLFSTTENTSGRKENENGKWGLSEAELLSKNSEMEG 83
           +EVD +K+KPA P+RR+DG GYRETL S      G K  E   WGL+EA+L  +   +E 
Sbjct: 61  KEVDLAKLKPAVPDRRVDGTGYRETLLSVP--GEGEKPEE---WGLTEAKLQEEEEVLEE 115

Query: 82  TAVEDEKSKE-----TVRRRLIVGSAITVLSI 2
            + E ++  E     TV RRL++G  ++V++I
Sbjct: 116 DSQEKKEEDEGNENATVYRRLLIGVGLSVVAI 147


>ref|XP_002974354.1| hypothetical protein SELMODRAFT_442491 [Selaginella moellendorffii]
           gi|300157952|gb|EFJ24576.1| hypothetical protein
           SELMODRAFT_442491 [Selaginella moellendorffii]
          Length = 300

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
 Frame = -2

Query: 262 REVDFSKMKPATPERRIDGVGYRETLFSTTENTSGRKENENGKWGLSEAELLSKNSEMEG 83
           +EVD +K+KPA P++R+DG GYRETL S      G K  E   WGL+EA+L  +    E 
Sbjct: 61  KEVDLAKLKPAVPDKRVDGTGYRETLLSVP--GEGEKPEE---WGLTEAKLQEEEEVFEE 115

Query: 82  TAVEDEKSKE-----TVRRRLIVGSAITVLSI 2
            + E ++  E     TV RRL++G  ++V++I
Sbjct: 116 DSQEKKEEDEGNENATVYRRLLIGVGLSVVAI 147


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