BLASTX nr result

ID: Ephedra26_contig00010816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00010816
         (1670 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16810.1| unknown [Picea sitchensis]                              85   1e-13
gb|ABK24310.1| unknown [Picea sitchensis]                              73   4e-10
ref|XP_006846097.1| hypothetical protein AMTR_s00012p00118890 [A...    67   2e-08
gb|EOY07599.1| Uncharacterized protein TCM_021989 [Theobroma cacao]    60   4e-06

>gb|ABR16810.1| unknown [Picea sitchensis]
          Length = 181

 Score = 84.7 bits (208), Expect = 1e-13
 Identities = 41/86 (47%), Positives = 55/86 (63%)
 Frame = -3

Query: 258 LRGGREKSGLGAKPKLSVTWAPDVQEPRSSSHYRFVRGQRSQNSRKKDHKQRXXXXXXXX 79
           +RGG+E++GLG +PKLS+ WAPDVQEP+ SS    V+  R   S+KKD K +        
Sbjct: 1   MRGGQEQNGLGPRPKLSLKWAPDVQEPQISSVSHTVKNHRWHQSKKKDRKHKHKGKSSHT 60

Query: 78  XXXSRNEKKHKSKRSRSFDSAASRYW 1
              ++N+KKH SKRS + DS  SR W
Sbjct: 61  SGSNKNDKKHHSKRSYNSDSGRSRLW 86


>gb|ABK24310.1| unknown [Picea sitchensis]
          Length = 450

 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 68/246 (27%), Positives = 102/246 (41%), Gaps = 37/246 (15%)
 Frame = -3

Query: 675 NIDFTVS-------------DNVVESLQNFFQASLQ-VDSVKRKIQDRETETYGSDLFQK 538
           N++FTV              D+  E L+N  + +L  VD+ K+      TET G D   K
Sbjct: 77  NVNFTVENKGDPEGSFSDTDDSPTEDLRNALEVNLNIVDASKQDFNINLTET-GDDFSCK 135

Query: 537 QTGHEEVIDCDKTGSVTCLIGKPKDEQKVFLPELEQDSLFMYTGPSLSLQYS------PT 376
                +      T     +    ++E+K    ++EQ+   + T  SL  +        P 
Sbjct: 136 DKKKRKKKRKGSTRKPNQIFAFNQEERK----KIEQNKFPLDTKKSLISKTLCKSATFPD 191

Query: 375 SSEMLQTLDTIDTKKHHELNNAI-----------------CXXXXXXXXSFKLISALRGG 247
           S+   Q+   I   K  +  NAI                          SFK++ A+RGG
Sbjct: 192 SAGGTQSSKNIPNTKVEKFENAIENGAESQYGYPDGKNSLMTRTISFPPSFKIVPAIRGG 251

Query: 246 REKSGLGAKPKLSVTWAPDVQEPRSSSHYRFVRGQRSQNSRKKDHKQRXXXXXXXXXXXS 67
           +E++G+G +PKL V WAPDVQEP  SS    VR      S+KKDHK +            
Sbjct: 252 QEQNGMGPRPKLGVKWAPDVQEPPCSSVSHTVRTYHRHQSKKKDHKHKPKAKLGHGGGSV 311

Query: 66  RNEKKH 49
           + +K+H
Sbjct: 312 KTDKQH 317


>ref|XP_006846097.1| hypothetical protein AMTR_s00012p00118890 [Amborella trichopoda]
           gi|548848867|gb|ERN07772.1| hypothetical protein
           AMTR_s00012p00118890 [Amborella trichopoda]
          Length = 356

 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 32/85 (37%), Positives = 48/85 (56%)
 Frame = -3

Query: 276 FKLISALRGGREKSGLGAKPKLSVTWAPDVQEPRSSSHYRFVRGQRSQNSRKKDHKQRXX 97
           FKL+SA++GGRE+ G+  K KL+V WAPDV EP  +S    VR  +    +KKDH +   
Sbjct: 191 FKLVSAMKGGREQQGISPKLKLAVKWAPDVYEPTPTSLSHTVRNHQRAKPKKKDHNKNKH 250

Query: 96  XXXXXXXXXSRNEKKHKSKRSRSFD 22
                      ++K+H  +RS  ++
Sbjct: 251 GKGKSSRGSGSDKKQHYHRRSTGYN 275


>gb|EOY07599.1| Uncharacterized protein TCM_021989 [Theobroma cacao]
          Length = 237

 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 30/57 (52%), Positives = 40/57 (70%)
 Frame = -3

Query: 273 KLISALRGGREKSGLGAKPKLSVTWAPDVQEPRSSSHYRFVRGQRSQNSRKKDHKQR 103
           KL+SAL+G REK GL  K KLSVTWAPDV +P  +S    VRG++ Q  +K + K++
Sbjct: 101 KLVSALKGSREKQGLSPK-KLSVTWAPDVYDPPPTSVLHTVRGKKQQKLKKNNDKKK 156


Top