BLASTX nr result
ID: Ephedra26_contig00010799
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00010799
(902 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006851750.1| hypothetical protein AMTR_s00040p00223590 [A... 123 8e-26
gb|EOY19004.1| P-loop containing nucleoside triphosphate hydrola... 104 5e-20
ref|XP_002315356.2| hypothetical protein POPTR_0010s24020g [Popu... 102 1e-19
ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putativ... 102 2e-19
ref|XP_006492170.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 100 6e-19
gb|EMJ20157.1| hypothetical protein PRUPE_ppa003553mg [Prunus pe... 99 2e-18
ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent... 99 2e-18
gb|ESW17512.1| hypothetical protein PHAVU_007G245100g [Phaseolus... 96 2e-17
ref|XP_003590262.1| DEAD-box ATP-dependent RNA helicase [Medicag... 96 2e-17
ref|XP_001756064.1| predicted protein [Physcomitrella patens] gi... 94 5e-17
ref|XP_004491931.1| PREDICTED: pre-mRNA-processing ATP-dependent... 92 3e-16
ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent... 92 3e-16
ref|XP_006409889.1| hypothetical protein EUTSA_v10016555mg [Eutr... 91 6e-16
ref|NP_180427.1| DEAD/DEAH box helicase-like protein [Arabidopsi... 90 1e-15
gb|AAM13871.1| putative ATP-dependent RNA helicase [Arabidopsis ... 90 1e-15
ref|XP_002879168.1| ATP binding protein [Arabidopsis lyrata subs... 84 7e-14
ref|XP_006379480.1| hypothetical protein POPTR_0008s02660g, part... 80 1e-12
ref|XP_004977524.1| PREDICTED: ATP-dependent RNA helicase DBP3-l... 79 2e-12
ref|XP_006296151.1| hypothetical protein CARUB_v10025303mg [Caps... 79 3e-12
tpg|DAA59247.1| TPA: ATP-dependent RNA helicase [Zea mays] 77 1e-11
>ref|XP_006851750.1| hypothetical protein AMTR_s00040p00223590 [Amborella trichopoda]
gi|548855330|gb|ERN13217.1| hypothetical protein
AMTR_s00040p00223590 [Amborella trichopoda]
Length = 566
Score = 123 bits (309), Expect = 8e-26
Identities = 75/222 (33%), Positives = 126/222 (56%), Gaps = 7/222 (3%)
Frame = +1
Query: 4 QTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVLK 183
+T+ILSD Y ++ +AQ++LK P ++ D + +S I QH V +++E KT KV+K
Sbjct: 347 KTVILSDKYGSTAIQIAQSLLKPPFRRLFIDNSIISESLGIYQHPYVCMSDEAKTSKVMK 406
Query: 184 ILSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQSNGYLVKSG-ISQPEHKVEDIDNNL 360
IL Q Q + +++V A V +L+ Q+ + V S ++ H D++
Sbjct: 407 ILKQDHSDQPLSSIFRSLVIVGTASKVQLLVAKFQAERFAVSSDLVNVRSHGSTPSDHSS 466
Query: 361 DKCRLQIIVTTESLVDQNAISEAE------IVIGYNFLSSIQTYCKILTGMARHSINGVL 522
++V S+ D+++I E + Y+F SSI+ Y +IL+ M H I GV+
Sbjct: 467 LSSEKGVVV---SVTDKDSIGRTEDIGVFQTIFFYDFPSSIEEYVEILSKMETHLIKGVI 523
Query: 523 HSFLCGKDALMASPLINVLKQCSQPIPKSLEMMADAASVIHK 648
+S G DA +A PLI V++Q +QP+P++L+M++DAASV+ K
Sbjct: 524 YSLCSGVDAPLAKPLIKVMEQHAQPVPETLKMLSDAASVVFK 565
>gb|EOY19004.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein, putative isoform 1 [Theobroma cacao]
Length = 578
Score = 104 bits (259), Expect = 5e-20
Identities = 62/204 (30%), Positives = 115/204 (56%)
Frame = +1
Query: 1 PQTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVL 180
P T++ +D +++AS+ QN+L V ++ + ++ QSACI Q + V ++E++ K +
Sbjct: 365 PHTLVFNDSFSNASIPAVQNLLTGLVYRLSLNDSVASQSACIIQSIYVCSSKEERMMKGI 424
Query: 181 KILSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQSNGYLVKSGISQPEHKVEDIDNNL 360
L Q+ + KV+ +V + + V+ L+++++ GY + S + E+ ++
Sbjct: 425 DALDDVYWNQMIPQPLKVLYIVGKDNNVEKLVSAVKLKGYSISISSSLNIMEFENSLHSG 484
Query: 361 DKCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSFLCG 540
+ R + V + + E +VI +F+ SI Y +IL+ MAR ++NGVLHSFL
Sbjct: 485 IRGRRTVSVVATEHISSTDLGEYGVVILPDFVLSIDDYVQILSRMARQTVNGVLHSFLTE 544
Query: 541 KDALMASPLINVLKQCSQPIPKSL 612
DA A PLI +L++C Q +P++L
Sbjct: 545 DDAQHAGPLIEILEKCGQAVPEAL 568
>ref|XP_002315356.2| hypothetical protein POPTR_0010s24020g [Populus trichocarpa]
gi|550330484|gb|EEF01527.2| hypothetical protein
POPTR_0010s24020g [Populus trichocarpa]
Length = 491
Score = 102 bits (255), Expect = 1e-19
Identities = 69/212 (32%), Positives = 117/212 (55%)
Frame = +1
Query: 4 QTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVLK 183
+T++ ++ ++ A + + QN+L + ++ D + IQSACI Q +++ +EE++ KV
Sbjct: 289 RTVVFNNFFSGACVPVLQNLLLGSICRLSIDQSIPIQSACIVQTINLCTSEEERLLKVCT 348
Query: 184 ILSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQSNGYLVKSGISQPEHKVEDIDNNLD 363
SQY L + F V+ +V + L+ L+ NGY V ++ I N+ +
Sbjct: 349 --SQY----LDNCFLLVLYVVGNDNSSFNLVKMLEINGYTVSVESNR------SISNDDN 396
Query: 364 KCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSFLCGK 543
+ + + V + ++ E VI NF+ SI Y +ILT MARHSI G HSFL +
Sbjct: 397 RMKPVVSVINVERISTTNLAFYETVILPNFVPSIDNYVQILTRMARHSIKGNFHSFLTKE 456
Query: 544 DALMASPLINVLKQCSQPIPKSLEMMADAASV 639
DAL+A PL+ +L+QC Q +P++L + +SV
Sbjct: 457 DALIARPLMGILEQCGQAVPEALRNLHLTSSV 488
>ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223529548|gb|EEF31501.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 493
Score = 102 bits (254), Expect = 2e-19
Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 5/212 (2%)
Frame = +1
Query: 1 PQTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVL 180
P T+ ++++ A + QN+ + ++ + QSACI Q + V +E+KK K+
Sbjct: 297 PHTVAFNNLFNHACVPALQNLFVGSINRLSLSDSICSQSACIFQTIEVCTSEQKKLSKLC 356
Query: 181 KILSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQSNGYLVKSGISQPEHKVEDIDNNL 360
H+ K++ +VE L+ L+SNGY V + + +V ++D
Sbjct: 357 S-----------HRL-KLLFIVENNKKAASLVKILKSNGYSVST---ESNCEVSNVDT-- 399
Query: 361 DKCRLQIIVTTESLVDQNAISEA-----EIVIGYNFLSSIQTYCKILTGMARHSINGVLH 525
R++ +V S+++ IS A EI+I NF+ SI Y +ILT MARH+ +G+LH
Sbjct: 400 ---RMKPVV---SVINAEHISTADLGVYEIIILPNFVLSIDNYIQILTRMARHTTHGILH 453
Query: 526 SFLCGKDALMASPLINVLKQCSQPIPKSLEMM 621
SF+ +DAL+A PLI +L+QC Q +P++L +
Sbjct: 454 SFMTEEDALLAGPLIEILEQCGQAVPETLRTL 485
>ref|XP_006492170.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Citrus
sinensis]
Length = 573
Score = 100 bits (250), Expect = 6e-19
Identities = 61/206 (29%), Positives = 114/206 (55%), Gaps = 2/206 (0%)
Frame = +1
Query: 1 PQTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVL 180
P T++ +D S+ QN+L + ++ + ++ QSACI Q V+V ++E+K K +
Sbjct: 359 PHTVVFNDCLTYTSVPAVQNLLLGSINRLSLNQSVASQSACIIQSVNVCASDEEKILKGI 418
Query: 181 KILSQ-YGEKQLFHKFE-KVVILVERADIVDVLMTSLQSNGYLVKSGISQPEHKVEDIDN 354
++L YG+ FH KV+ +V + L+++L+ GY + +G + +++
Sbjct: 419 QVLDHAYGDH--FHSEPLKVLYIVGKDSKFQNLVSTLKCKGYSISTGSNCIVSHIKNSVE 476
Query: 355 NLDKCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSFL 534
+ R + + + + + E E+VI +F+ S++ Y +ILT MARH+++G+LHSF
Sbjct: 477 ADGRKRPAVSMIDKDHISTAELEEYEVVIVPDFIISMKNYVEILTSMARHTVSGILHSFF 536
Query: 535 CGKDALMASPLINVLKQCSQPIPKSL 612
DA A +I +L+QC Q +P +L
Sbjct: 537 TKDDAAHAGQMIEILEQCGQVVPDAL 562
>gb|EMJ20157.1| hypothetical protein PRUPE_ppa003553mg [Prunus persica]
Length = 566
Score = 99.4 bits (246), Expect = 2e-18
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 3/209 (1%)
Frame = +1
Query: 7 TIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVLKI 186
T++ SD Y A + QN+L V ++ + ++ QSACI Q V++ + +EK K +++
Sbjct: 362 TVVFSDCYRHACVRGLQNLLMGSVHRLSLNNSVTGQSACIVQSVNICLMKEK-LPKAIQV 420
Query: 187 LSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQSNGYLVKSGISQPEHKVEDIDNNLD- 363
L Q +L + KV+ +V + + L+ +L+ GY + P+ ++ N+++
Sbjct: 421 LDQAYGGRLRPQASKVLYIVGKDNKHHKLVNALKFKGYSIS-----PDSVFSEVGNSVES 475
Query: 364 --KCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSFLC 537
+ R + + + + E E+VI + SI+ Y +ILT MAR+++NGVLHS
Sbjct: 476 KGRARPAVSMIDIDQIGTTELGEYEVVIIPDMTLSIEGYVQILTRMARYTVNGVLHSLFT 535
Query: 538 GKDALMASPLINVLKQCSQPIPKSLEMMA 624
+DA +A PL +L+QC Q +P +L M+
Sbjct: 536 REDAELAGPLTKILEQCGQAVPDALRKMS 564
>ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
[Cucumis sativus] gi|449517699|ref|XP_004165882.1|
PREDICTED: pre-mRNA-processing ATP-dependent RNA
helicase prp5-like [Cucumis sativus]
Length = 562
Score = 99.0 bits (245), Expect = 2e-18
Identities = 62/216 (28%), Positives = 117/216 (54%), Gaps = 3/216 (1%)
Frame = +1
Query: 7 TIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVLKI 186
TI+ SD ++ A + Q++L P+ ++ + ++ QSACI Q ++ + +E++K KV++
Sbjct: 349 TIVFSDSFSCAYVPFIQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEKEKLSKVIQA 408
Query: 187 LSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQSNGYLVKSGISQPEHKVEDIDNNLD- 363
L + Q+ + K++ ++ + V L +L+ G+ + +G V +I NNL
Sbjct: 409 LDRANGSQIRPQPLKMLFILGKECNVHDLAAALKFKGHDIVAGALCG---VPEIKNNLKV 465
Query: 364 --KCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSFLC 537
K R + T ++ + E + + I Y +ILTGMARH+ NGVLHSF+
Sbjct: 466 DGKLRPVVAKTDIEQINTIDLGTYESIFILSAFPPIDKYVEILTGMARHTNNGVLHSFIS 525
Query: 538 GKDALMASPLINVLKQCSQPIPKSLEMMADAASVIH 645
++A +A L+ +L+QC Q +PK++ ++ + H
Sbjct: 526 KEEASVAGSLVEILEQCGQDVPKTVRNLSLTQATSH 561
>gb|ESW17512.1| hypothetical protein PHAVU_007G245100g [Phaseolus vulgaris]
Length = 564
Score = 95.5 bits (236), Expect = 2e-17
Identities = 66/214 (30%), Positives = 112/214 (52%)
Frame = +1
Query: 1 PQTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVL 180
P +I +D + S+ + Q +L + ++ + ++ S+CI Q V V +EE +KV+
Sbjct: 356 PHLVIFNDCLSHESVPVVQYLLTGSICRLSLNNSITSLSSCIIQSVKVCTSEE---DKVI 412
Query: 181 KILSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQSNGYLVKSGISQPEHKVEDIDNNL 360
+ + G Q K V+ ++ + L+ L+S G + S + +D++
Sbjct: 413 ESVKALGRFQRSRKKSNVLYILRKDVKCHKLLKILKSKGCSISLD-SDSASLNDSVDSDS 471
Query: 361 DKCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSFLCG 540
I + S D I + VI NF+ SI TY ILT MAR S+NGVL+SFL
Sbjct: 472 KPVVSAIALDHISTTD---IGTYDAVILPNFVPSIDTYVHILTKMARQSVNGVLYSFLTK 528
Query: 541 KDALMASPLINVLKQCSQPIPKSLEMMADAASVI 642
+D +ASPLI VL+QC Q +P+SL+ + +++++
Sbjct: 529 RDTELASPLITVLEQCGQEVPQSLQDLHHSSNMV 562
>ref|XP_003590262.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355479310|gb|AES60513.1| DEAD-box ATP-dependent RNA
helicase [Medicago truncatula]
Length = 532
Score = 95.5 bits (236), Expect = 2e-17
Identities = 63/220 (28%), Positives = 119/220 (54%), Gaps = 2/220 (0%)
Frame = +1
Query: 1 PQTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVL 180
P ++ +D + S+ + +++L P+ ++ + ++ S+CI Q V V ++E K K +
Sbjct: 321 PSLVVFNDSFNHTSIPVVRHLLTGPICRISINNSIASLSSCIVQSVQVCTSDEDKLVKSI 380
Query: 181 KILSQYGEKQLFHKFEKVVILVERADI-VDVLMTSLQSNGYLVKSGISQPEHKVED-IDN 354
++L Q+ Q H + IL R D+ L+ +L+S G + + + D +D+
Sbjct: 381 EVLRQFRSSQT-HSSNLLYIL--RKDVKCHKLVKTLKSMG--CSTSLDSDAATINDSVDS 435
Query: 355 NLDKCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSFL 534
N RL ++ E + + I ++++ + + S+ TY ILT MAR S+NG+LH FL
Sbjct: 436 NR---RLVTMIDLEDISTLD-IGMYDVIVLPSLVPSMDTYEHILTNMARQSVNGILHGFL 491
Query: 535 CGKDALMASPLINVLKQCSQPIPKSLEMMADAASVIHK*E 654
D A PLI++L+QC Q +P++L+ + A+++ K E
Sbjct: 492 TKSDTEHAGPLISILEQCGQEVPETLKDLHQASNICRKIE 531
>ref|XP_001756064.1| predicted protein [Physcomitrella patens]
gi|162692574|gb|EDQ78930.1| predicted protein
[Physcomitrella patens]
Length = 557
Score = 94.4 bits (233), Expect = 5e-17
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 4/219 (1%)
Frame = +1
Query: 4 QTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVLK 183
Q ++S ++ + A N L+ PV + + D + SACI Q VSV EE K K K
Sbjct: 349 QVGVISKTFSADVVSAAGNWLQHPVARAVLDKNVPASSACILQSVSVTTTEESKLTKFNK 408
Query: 184 ILSQYGEK-QLFHKFEKVVILV---ERADIVDVLMTSLQSNGYLVKSGISQPEHKVEDID 351
IL Q + + H V+IL+ E+ ++ L+ + + + P + I
Sbjct: 409 ILEQIRKNLEDNHILGSVLILIKGSEQFPVLKELLLKHKLTPHFINESAGVPRKQKRSI- 467
Query: 352 NNLDKCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSF 531
++ + ++ + +S+ E+ I Y+F I Y +ILTGMAR S+ G + +
Sbjct: 468 ---------MVAKFDDKIEPSVLSKVEVAINYDFSWPIHHYTQILTGMARSSVKGRIETL 518
Query: 532 LCGKDALMASPLINVLKQCSQPIPKSLEMMADAASVIHK 648
G AL A L+ +L+ C Q +P+ L ++A AA+++ K
Sbjct: 519 CSGAAALHADSLVEILETCGQSVPRPLLLLAQAAALLRK 557
>ref|XP_004491931.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
[Cicer arietinum]
Length = 544
Score = 92.0 bits (227), Expect = 3e-16
Identities = 60/215 (27%), Positives = 115/215 (53%), Gaps = 1/215 (0%)
Frame = +1
Query: 1 PQTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVL 180
P+ +I +D + + + +++L + ++ + + S+CI Q V +EE K K +
Sbjct: 335 PRLVIFNDSFNHTVIPVVRHLLTGSICRLSLNNSFASLSSCIVQSVQACTSEEDKVPKSI 394
Query: 181 KILSQYGEKQLFHKFEKVVILVERADI-VDVLMTSLQSNGYLVKSGISQPEHKVEDIDNN 357
+IL Q+ H ++ + R D+ L+ +L+S G S + + +D+N
Sbjct: 395 EILCQFWSS---HTRSSNLLYILRKDVKCHKLVKTLKSMGCCSMPLGSDAVNINDSVDSN 451
Query: 358 LDKCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSFLC 537
RL ++ E +V + I +I++ +F+ S+ TY ILT MAR S+NGVL+ FL
Sbjct: 452 R---RLVSMIDLEDVVKVD-IGMYDIIVLPSFVPSMDTYVHILTNMARQSVNGVLYGFLT 507
Query: 538 GKDALMASPLINVLKQCSQPIPKSLEMMADAASVI 642
+D +A PLI++L+QC Q +P +L+ + ++++
Sbjct: 508 KRDTELAGPLISILEQCGQEVPDTLQNLHQESNML 542
>ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
[Glycine max]
Length = 563
Score = 92.0 bits (227), Expect = 3e-16
Identities = 64/219 (29%), Positives = 116/219 (52%), Gaps = 5/219 (2%)
Frame = +1
Query: 1 PQTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVL 180
P+ +I +D + S+ + + +L + +V + ++ S+ I Q V V +EE K +
Sbjct: 354 PRVVIFNDCVSHMSIPMVRYLLTGSICRVSLNNSINSLSSYIIQSVEVCTSEEDKVVMSI 413
Query: 181 KILSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQSNGYLVKSGISQPEHKVEDIDNNL 360
+ L Q+ + ++ ++ + L+ +L+S GY V + +I++ +
Sbjct: 414 EALDQFQSNSTQNS--NMLYILSKDVKCHKLVKTLKSKGYSVSL-----DSDAANINDRV 466
Query: 361 DKCRLQIIVTTESLVDQNAISEAEI-----VIGYNFLSSIQTYCKILTGMARHSINGVLH 525
D R + SL+D IS +I V+ +F+ SI TY ILT MAR S+NGVLH
Sbjct: 467 DSDRRAAV----SLIDLVQISTTDIGTYDVVVLPSFVPSIDTYVHILTKMARTSVNGVLH 522
Query: 526 SFLCGKDALMASPLINVLKQCSQPIPKSLEMMADAASVI 642
SFL +D +A+PLI VL+QC Q +P++L+ + ++++
Sbjct: 523 SFLTKRDTELAAPLIAVLEQCGQEVPQTLQDLNHTSNML 561
>ref|XP_006409889.1| hypothetical protein EUTSA_v10016555mg [Eutrema salsugineum]
gi|557111058|gb|ESQ51342.1| hypothetical protein
EUTSA_v10016555mg [Eutrema salsugineum]
Length = 499
Score = 90.9 bits (224), Expect = 6e-16
Identities = 61/203 (30%), Positives = 111/203 (54%), Gaps = 2/203 (0%)
Frame = +1
Query: 4 QTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVLK 183
+TI+ SD ++ + + Q++L + ++ ++ Q++CISQ V+V +EEKK +K +
Sbjct: 299 RTIVFSDSFSASYIPAVQSLLGGSINRLSLSDSVASQASCISQTVNVCASEEKKLQKFSE 358
Query: 184 ILSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQSNGYLVKSGISQPEHKVEDIDNNLD 363
+L K ++ +V + + L L+ G V + + K+ ++ +
Sbjct: 359 VLDSSSSK--------IIYIVAKEESFRKLKALLKVKGLSVSAN---SDSKISELKKS-- 405
Query: 364 KCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSFLCGK 543
+ L ++ E L D +S+ E V+ +F+ S +TY +ILT MAR S++GVLHSFL K
Sbjct: 406 RKPLARLIDIEEL-DITVMSDFETVLLPDFVPSFETYVQILTSMARDSVHGVLHSFLTEK 464
Query: 544 DALM--ASPLINVLKQCSQPIPK 606
+A+ A L+NVL+ C Q +P+
Sbjct: 465 EAVSYPAGSLVNVLEDCGQIVPE 487
>ref|NP_180427.1| DEAD/DEAH box helicase-like protein [Arabidopsis thaliana]
gi|4580397|gb|AAD24375.1| putative ATP-dependent RNA
helicase [Arabidopsis thaliana]
gi|29824179|gb|AAP04050.1| putative ATP-dependent RNA
helicase [Arabidopsis thaliana]
gi|330253053|gb|AEC08147.1| DEAD/DEAH box helicase-like
protein [Arabidopsis thaliana]
Length = 502
Score = 89.7 bits (221), Expect = 1e-15
Identities = 64/213 (30%), Positives = 110/213 (51%), Gaps = 2/213 (0%)
Frame = +1
Query: 4 QTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVLK 183
QTI+ ++ ++ + + Q+ L V +V + ++ Q +CI+Q VSV +EEKK +K K
Sbjct: 303 QTIVFNNSFSASIIPAVQSFLGGSVNRVTVNESVASQGSCITQTVSVCASEEKKLQKFAK 362
Query: 184 ILSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQSNGYLVKSGISQPEHKVEDIDNNLD 363
L K ++ +V + + +M L+ G V + + K+ ++ +
Sbjct: 363 HLDSSSSKLIY--------IVTKEESFKKIMAILKLKGISVSTS---SDSKLSEVKKS-- 409
Query: 364 KCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSFLCGK 543
+ + ++ E L D + ++E V+ +F SI+ Y +ILT MAR S +GVLHS++ K
Sbjct: 410 RKPVAHLIDFEQL-DTTVMRDSETVLLPDFFPSIEIYTQILTSMARESAHGVLHSYITEK 468
Query: 544 DA--LMASPLINVLKQCSQPIPKSLEMMADAAS 636
DA A PL+NVL+ C Q +P M A S
Sbjct: 469 DAASYQAGPLVNVLENCGQNVPDRWRNMDVAMS 501
>gb|AAM13871.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 522
Score = 89.7 bits (221), Expect = 1e-15
Identities = 64/213 (30%), Positives = 110/213 (51%), Gaps = 2/213 (0%)
Frame = +1
Query: 4 QTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVLK 183
QTI+ ++ ++ + + Q+ L V +V + ++ Q +CI+Q VSV +EEKK +K K
Sbjct: 323 QTIVFNNSFSASIIPAVQSFLGGSVNRVTVNESVASQGSCITQTVSVCASEEKKLQKFAK 382
Query: 184 ILSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQSNGYLVKSGISQPEHKVEDIDNNLD 363
L K ++ +V + + +M L+ G V + + K+ ++ +
Sbjct: 383 HLDSSSSKLIY--------IVTKEESFKKIMAILKLKGISVSTS---SDSKLSEVKKS-- 429
Query: 364 KCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSFLCGK 543
+ + ++ E L D + ++E V+ +F SI+ Y +ILT MAR S +GVLHS++ K
Sbjct: 430 RKPVAHLIDFEQL-DTTVMRDSETVLLPDFFPSIEIYTQILTSMARESAHGVLHSYITEK 488
Query: 544 DA--LMASPLINVLKQCSQPIPKSLEMMADAAS 636
DA A PL+NVL+ C Q +P M A S
Sbjct: 489 DAASYQAGPLVNVLENCGQNVPDRWRNMDVAMS 521
>ref|XP_002879168.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297325007|gb|EFH55427.1| ATP binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 505
Score = 84.0 bits (206), Expect = 7e-14
Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 2/213 (0%)
Frame = +1
Query: 4 QTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVLK 183
Q+I+ +D ++D+++ Q++L + +V ++ Q +CI Q V+V +EE+K +K +
Sbjct: 306 QSIVFNDSFSDSTIPAVQSLLGRSINRVTVSDSVASQGSCIIQTVNVCASEEQKLQKFAE 365
Query: 184 ILSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQSNGYLVKSGISQPEHKVEDIDNNLD 363
L K ++ +V + + + L+ G V + K+ ++ +
Sbjct: 366 HLDSSSSK--------IIHIVTKEESFKKIKALLKLKGLSVSIN---SDSKISEVKKS-- 412
Query: 364 KCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSFLCGK 543
+ + ++ E L D + + E V+ +F SI+ Y +ILT MAR S++GVLHSF+ K
Sbjct: 413 RKPVAHLIDIEQL-DTTVMRDFETVLLPDFFPSIEIYTQILTSMARESVHGVLHSFITEK 471
Query: 544 DA--LMASPLINVLKQCSQPIPKSLEMMADAAS 636
+A A PL+ +L+ C Q IP M A S
Sbjct: 472 EAASYRAGPLVTILEDCGQNIPDPWRNMHVAMS 504
>ref|XP_006379480.1| hypothetical protein POPTR_0008s02660g, partial [Populus
trichocarpa] gi|550332267|gb|ERP57277.1| hypothetical
protein POPTR_0008s02660g, partial [Populus trichocarpa]
Length = 189
Score = 80.1 bits (196), Expect = 1e-12
Identities = 56/177 (31%), Positives = 91/177 (51%)
Frame = +1
Query: 112 QSACISQHVSVFVNEEKKTEKVLKILSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQS 291
QSAC+ Q +V ++E + K +++L+ + QL + KV+ +V L+ L+
Sbjct: 39 QSACVVQTTNVCTSDEIRLIKGIQVLNHACDSQLASQPLKVLYVVGNDSNSFNLVKMLKI 98
Query: 292 NGYLVKSGISQPEHKVEDIDNNLDKCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQT 471
NGY V +G + H + D DN R + +V+ ++SI
Sbjct: 99 NGYTVSTGSN---HNISDDDN-----RRKPLVSV--------------------INSIDN 130
Query: 472 YCKILTGMARHSINGVLHSFLCGKDALMASPLINVLKQCSQPIPKSLEMMADAASVI 642
Y + LT MARH+INGV HSFL +DA +A P I +L+QC Q +P +L + +S++
Sbjct: 131 YVQTLTRMARHTINGVSHSFLTTEDAPIAGPRIKILEQCGQAVPDALRNLHLTSSML 187
>ref|XP_004977524.1| PREDICTED: ATP-dependent RNA helicase DBP3-like [Setaria italica]
Length = 528
Score = 79.3 bits (194), Expect = 2e-12
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Frame = +1
Query: 1 PQTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVL 180
P I +D +A+ +L++ + K+ + + +SA ++QHV +E+ KT KV
Sbjct: 325 PPITIFTDSSDKNVATMAKTLLRERITKLSINDSVYSRSAFVTQHVHFCPSEKLKTSKVK 384
Query: 181 KILSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQSNGYLVKSGISQPEHKV---EDID 351
+IL Q + K KV+++ L +SL+ V G + +
Sbjct: 385 EILEQILQSHA-KKSSKVLLVAASDKKAQHLSSSLKLENCTVTDGSHGTSFTICSSVGLM 443
Query: 352 NNLDKCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSF 531
N K R +++T + E V+ +F S+ Y ILTG+ARH+I G +HS
Sbjct: 444 NVHVKDRENLVMTD--------VEGFETVLVVDFPPSVDEYVDILTGVARHTIGGEVHSI 495
Query: 532 LCGKDALMASPLINVLKQCSQPIPKSLEMM 621
C DA +A PL +L CSQ +P+ L+ +
Sbjct: 496 FCNTDAPVAKPLAELLANCSQVVPEFLKKL 525
>ref|XP_006296151.1| hypothetical protein CARUB_v10025303mg [Capsella rubella]
gi|482564859|gb|EOA29049.1| hypothetical protein
CARUB_v10025303mg [Capsella rubella]
Length = 486
Score = 78.6 bits (192), Expect = 3e-12
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 2/213 (0%)
Frame = +1
Query: 4 QTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVLK 183
Q+I+ +D ++ + Q +L + KV ++ Q +CI Q V+V +EE+K EK +
Sbjct: 297 QSIVFNDSFSSTIIPAIQGLLGRSINKVTASDSVASQGSCIIQTVNVCASEEQKLEKFAE 356
Query: 184 ILSQYGEKQLFHKFEKVVILVERADIVDVLMTSLQSNGYLVKSGISQPEHKVEDIDNNLD 363
+L K ++ +V + + + L+ G +P + DI+
Sbjct: 357 LLDSSSSK--------IIHIVTKEESFRKIRALLKIKGISEVKKSRKPLAHLIDIEQ--- 405
Query: 364 KCRLQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHSFLCGK 543
+D + + E V+ +F SI+ Y +ILT MAR S++G L SF+ K
Sbjct: 406 -------------LDTTVMKDFETVLLPDFFPSIEIYTQILTSMARESVHGELQSFITEK 452
Query: 544 DAL--MASPLINVLKQCSQPIPKSLEMMADAAS 636
DA+ A PL+++L+ C Q +P + ++ A S
Sbjct: 453 DAVSYQAEPLVSLLEDCGQNVPDPWKNLSVAMS 485
>tpg|DAA59247.1| TPA: ATP-dependent RNA helicase [Zea mays]
Length = 525
Score = 76.6 bits (187), Expect = 1e-11
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 5/211 (2%)
Frame = +1
Query: 4 QTIILSDMYADASMLLAQNILKDPVIKVITDGPLSIQSACISQHVSVFVNEEKKTEKVLK 183
Q I +D +A+N+L+ + K+ + +S +SA I+QHV +EE KT KV +
Sbjct: 323 QITIFTDPSDKNIATMAKNLLRGRITKLSINDSVSSRSAFIAQHVHFCPSEELKTTKVKE 382
Query: 184 ILSQYGEKQLFHKFEKVVILVERADIVDVLMT-SLQSNGYLVKSGISQPEHKVEDIDNNL 360
IL Q Q K V+LV +D LM+ SL+ V + N+
Sbjct: 383 ILEQI--LQDHPKKTSKVLLVAASDKKARLMSLSLKLENCTVID---------DSCGNSF 431
Query: 361 DKCR----LQIIVTTESLVDQNAISEAEIVIGYNFLSSIQTYCKILTGMARHSINGVLHS 528
C + +IV + + E V+ + S+ Y +ILTG A H I G +HS
Sbjct: 432 TICSSVGLMNVIVKDRENMSVTDVEAFETVLVVDLPPSVDEYIEILTGAALHVIGGEVHS 491
Query: 529 FLCGKDALMASPLINVLKQCSQPIPKSLEMM 621
C DA +A PL +L C Q +P+ L+ +
Sbjct: 492 IFCNTDASVAKPLAQLLADCGQVVPEFLKSL 522