BLASTX nr result

ID: Ephedra26_contig00010624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00010624
         (597 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006411876.1| hypothetical protein EUTSA_v10026086mg [Eutr...    59   8e-07
gb|EOX91642.1| LOB domain-containing protein 38 [Theobroma cacao]      57   4e-06

>ref|XP_006411876.1| hypothetical protein EUTSA_v10026086mg [Eutrema salsugineum]
           gi|557113046|gb|ESQ53329.1| hypothetical protein
           EUTSA_v10026086mg [Eutrema salsugineum]
          Length = 246

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
 Frame = +1

Query: 1   VDPVFGSSGLLCSGNWHLCHAAVQAVLEGYTF---------PSIISPSPPQGMMGEDFGK 153
           V+PV G+ G+L +GNWH+C AAV+ VL G T          PS+IS      M+  D  +
Sbjct: 76  VNPVNGAVGMLWTGNWHVCQAAVETVLRGGTLRPMSDLLESPSLISSDDSSEMICTDIRR 135

Query: 154 AKVSKVGNKNSRFKHSRNKARKERSSQIECIDNDTMK-GNHVSDDELVDNHG 306
                  N + RF  SR+K     +++IE +D   +K   + SD +L  NHG
Sbjct: 136 DVSRNNQNHHCRFSSSRSKL---NTTEIEPVDRKRVKTDRYGSDLDLQLNHG 184


>gb|EOX91642.1| LOB domain-containing protein 38 [Theobroma cacao]
          Length = 231

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
 Frame = +1

Query: 1   VDPVFGSSGLLCSGNWHLCHAAVQAVLEGYT---FPSIISPSPPQGMMGE----DFGKAK 159
           V+PV G+ GLL +GNWH+C AAV+ VL G T    P +++P+P      E    D  K +
Sbjct: 76  VNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRAMPELMAPTPASDETSEATCTDMWKLQ 135

Query: 160 VSKVG-NKNSRFKHSRNKARKER 225
            +    N N RF +SR+K   +R
Sbjct: 136 ETATNLNSNCRFSNSRSKVSPKR 158


Top