BLASTX nr result
ID: Ephedra26_contig00010547
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00010547
(773 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] 62 3e-15
gb|EOX92993.1| Uncharacterized protein TCM_001856 [Theobroma cacao] 55 3e-14
ref|XP_005709958.1| unnamed protein product [Chondrus crispus] g... 52 3e-13
ref|XP_005710287.1| unnamed protein product [Chondrus crispus] g... 52 8e-13
ref|XP_005717319.1| RNA-dependent DNA polymerase [Chondrus crisp... 52 3e-12
ref|XP_005714683.1| unnamed protein product [Chondrus crispus] g... 52 6e-12
ref|XP_005711125.1| unnamed protein product, partial [Chondrus c... 52 8e-12
ref|XP_005719306.1| unnamed protein product [Chondrus crispus] g... 52 2e-11
ref|XP_005710188.1| unnamed protein product [Chondrus crispus] g... 54 3e-11
ref|XP_003223441.1| PREDICTED: copia protein-like [Anolis caroli... 50 3e-11
ref|XP_005715938.1| unnamed protein product [Chondrus crispus] g... 52 3e-11
emb|CAN78616.1| hypothetical protein VITISV_003658 [Vitis vinifera] 46 4e-10
dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis t... 71 5e-10
gb|AAK50413.1|AC021891_14 Putative retroelement [Oryza sativa Ja... 51 8e-10
gb|ABB47538.2| retrotransposon protein, putative, Ty1-copia subc... 51 8e-10
gb|EFN60860.1| Copia protein [Camponotus floridanus] 70 1e-09
ref|XP_005710187.1| unnamed protein product [Chondrus crispus] g... 54 2e-09
emb|CAN74042.1| hypothetical protein VITISV_012948 [Vitis vinifera] 49 2e-09
gb|EOY19976.1| Retrotransposon protein, unclassified, putative [... 57 2e-09
emb|CAN76274.1| hypothetical protein VITISV_008497 [Vitis vinifera] 44 5e-09
>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
Length = 1109
Score = 62.0 bits (149), Expect(2) = 3e-15
Identities = 53/173 (30%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Frame = -2
Query: 751 SSNKLYKIE---FERAMLVKQE*KKS--WHQ*LSHASMAYLKKMKSEKIVLGFKDAEIGD 587
++NKL+ +E E+ LV +E +S WH H ++ LK + +++V G +I
Sbjct: 398 AANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLP--KIDS 455
Query: 586 FPNYSSCLAEKQTRKKNPASH-HRSSSKLEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSS 410
C+ KQ++K P R+SS LEIIHA LCGPM+ S Y++ DD S
Sbjct: 456 VNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQIASFGGSRYFLLFTDDHSR 515
Query: 409 YS-------------------------FLIANGIHH*KTTSYMLQ*NDVVEGK 326
S F G+H TT Y + N VVE K
Sbjct: 516 MSWVYFLQSKVLRTDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVVERK 568
Score = 46.6 bits (109), Expect(2) = 3e-15
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = -3
Query: 282 SLANKFWSDVIGTNNYLQNRIISKSINYKIPFELWFDHTPDLTHIGIDSSRCSIKTAEPR 103
+L+N FW++ + T YL N +K++ + P+E W+ P ++H+ + S
Sbjct: 584 NLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLIDSHN 643
Query: 102 LDKLAARNKSCILLGYSGIAK 40
KL ++ CI +GY +K
Sbjct: 644 RSKLDEKSVKCIFIGYCSQSK 664
>gb|EOX92993.1| Uncharacterized protein TCM_001856 [Theobroma cacao]
Length = 711
Score = 55.5 bits (132), Expect(2) = 3e-14
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = -3
Query: 279 LANKFWSDVIGTNNYLQNRIISKSINYKIPFELWFDHTPDLTHIGIDSSRCSIKTAEPRL 100
L F ++V T YLQN +I++++N + P+E W+ P + H+ I S C E
Sbjct: 438 LPKSFGAEVANTAVYLQNILITQAVNNETPYEAWYSSKPSVDHLRIFESICYFHVPEELR 497
Query: 99 DKLAARNKSCILLGYSGIAK 40
DKL + K + +GYS +K
Sbjct: 498 DKLQPKAKLGVFIGYSQQSK 517
Score = 49.7 bits (117), Expect(2) = 3e-14
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = -2
Query: 682 WHQ*LSHASMAYLKKMKSEKIVLGFKDAEIGDFPNYSSCLAEKQTRKKNP-ASHHRSSSK 506
WH+ L H + L ++ + ++L GD P S C K TR+ P AS +R+ +
Sbjct: 312 WHKRLGHCNYKSLLQVSASGLLLNLPKLH-GDGPICSFCQYGKLTRRSFPKASLNRAEHR 370
Query: 505 LEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSYSFLIANGIHH*KTTSYMLQ*NDVVEGK 326
LE +H+ + GP+ + S + ++ GIHH TT Y L+ N V E K
Sbjct: 371 LEFVHSDVAGPINNGGEYISSEFTISLE---------KEGIHHQLTTPYCLEQNGVSERK 421
>ref|XP_005709958.1| unnamed protein product [Chondrus crispus]
gi|507105973|emb|CDF39664.1| unnamed protein product
[Chondrus crispus]
Length = 728
Score = 52.4 bits (124), Expect(3) = 3e-13
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -3
Query: 267 FWSDVIGTNNYLQNRIISKSINYKI-PFELWFDHTPDLTHIGIDSSRCSIKTAEPRLDKL 91
FW++ + Y++NR+ S++I K+ P+ LW P++ H+ + S+C + + KL
Sbjct: 539 FWAEALANAVYVRNRVTSRAIPPKMTPYHLWMKSVPNVGHLRVFGSKCWYTLPKHNIQKL 598
Query: 90 AARNKSCILLGYS 52
AR K + LGY+
Sbjct: 599 DARAKEAMFLGYA 611
Score = 47.8 bits (112), Expect(3) = 3e-13
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 27/108 (25%)
Frame = -2
Query: 574 SSCLAEKQTRKKNPA--SHHRSSSKLEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSY-- 407
S+C+ K R P S R+ L+++H+ +CGP+ S+ Y++ IDD S++
Sbjct: 409 SACVYGKANRSVIPKERSSRRAYFCLDLVHSDVCGPLEVQSIGGAKYFITFIDDHSNWST 468
Query: 406 -----------------------SFLIANGIHH*KTTSYMLQ*NDVVE 332
SFLIANG H TT+Y + N V E
Sbjct: 469 HTDRKIKVLRTDRGGEYLSTEFKSFLIANGTQHQMTTAYTPEQNGVAE 516
Score = 21.2 bits (43), Expect(3) = 3e-13
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 64 IGIFGNSKAYKCYDISANRII 2
+G N+KAYK +D +++I
Sbjct: 608 LGYAENTKAYKLWDGDLHKVI 628
>ref|XP_005710287.1| unnamed protein product [Chondrus crispus]
gi|507106340|emb|CDF39993.1| unnamed protein product
[Chondrus crispus]
Length = 678
Score = 52.4 bits (124), Expect(3) = 8e-13
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -3
Query: 267 FWSDVIGTNNYLQNRIISKSINYKI-PFELWFDHTPDLTHIGIDSSRCSIKTAEPRLDKL 91
FW++ + Y++NR+ S++I K+ P+ LW P++ H+ + S+C + + KL
Sbjct: 532 FWAEALANAVYVRNRVTSRAIPPKMTPYHLWMKSVPNVGHLRVFGSKCWYTLPKHNIQKL 591
Query: 90 AARNKSCILLGYS 52
AR K + LGY+
Sbjct: 592 DARAKEAMFLGYA 604
Score = 46.2 bits (108), Expect(3) = 8e-13
Identities = 42/180 (23%), Positives = 67/180 (37%), Gaps = 61/180 (33%)
Frame = -2
Query: 688 KSWHQ*LSHASMAYLKKMKSEKIVLGFK-----DAEIGDFPN------YSSCLAEKQTRK 542
++WH+ +H + M + +V G K +I + N S+C+ K TR
Sbjct: 330 QTWHERFAHVHSQGIASMIRDNVVSGVKLLGNEANKINNTDNDCISEKCSACVYGKATRS 389
Query: 541 KNPA--SHHRSSSKLEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSYS------------ 404
P S R+ L+++H+ +CGP+ S+ Y++ IDD S++S
Sbjct: 390 VIPKERSSRRAYFSLDLVHSDVCGPLEVQSIGGAKYFITFIDDHSNWSVVYPMHHKSEAF 449
Query: 403 ------------------------------------FLIANGIHH*KTTSYMLQ*NDVVE 332
FLIANG H TT+Y + N V E
Sbjct: 450 ERYKMFAQLAQTHTGRKIKVLRTDRGGEYLSTEFKSFLIANGTQHQMTTAYTPEQNGVAE 509
Score = 21.2 bits (43), Expect(3) = 8e-13
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 64 IGIFGNSKAYKCYDISANRII 2
+G N+KAYK +D +++I
Sbjct: 601 LGYAENTKAYKLWDGDLHKVI 621
>ref|XP_005717319.1| RNA-dependent DNA polymerase [Chondrus crispus]
gi|515797405|emb|CDF77535.1| RNA-dependent DNA
polymerase [Chondrus crispus]
Length = 1372
Score = 52.4 bits (124), Expect(3) = 3e-12
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -3
Query: 267 FWSDVIGTNNYLQNRIISKSINYKI-PFELWFDHTPDLTHIGIDSSRCSIKTAEPRLDKL 91
FW++ + Y++NR+ S++I K+ P+ LW P++ H+ + S+C + + KL
Sbjct: 627 FWAEALANAVYVRNRVTSRAIPPKMTPYHLWMKSVPNVGHLRVFGSKCWYTLPKHNIQKL 686
Query: 90 AARNKSCILLGYS 52
AR K + LGY+
Sbjct: 687 DARAKEAMFLGYA 699
Score = 44.3 bits (103), Expect(3) = 3e-12
Identities = 42/180 (23%), Positives = 66/180 (36%), Gaps = 61/180 (33%)
Frame = -2
Query: 688 KSWHQ*LSHASMAYLKKMKSEKIVLGFK-----DAEIGDFPN------YSSCLAEKQTRK 542
++WH+ +H + M + +V G K +I + N S+C+ K TR
Sbjct: 425 QTWHERFAHVHSQGIASMIRDNVVSGVKLLGNEANKINNTDNDCISEKCSACVYGKATRS 484
Query: 541 KNPA--SHHRSSSKLEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSYS------------ 404
P S R L+++H+ +CGP+ S+ Y++ IDD S++S
Sbjct: 485 VIPKERSSRRPYFCLDLVHSDVCGPLEVQSIGGAKYFITFIDDHSNWSVVYPMHHKSEAF 544
Query: 403 ------------------------------------FLIANGIHH*KTTSYMLQ*NDVVE 332
FLIANG H TT+Y + N V E
Sbjct: 545 ERYKMFAQLAQTHTGRKIKVLRTDRGGEYLSTEFKSFLIANGTQHQMTTAYTPEQNGVAE 604
Score = 21.2 bits (43), Expect(3) = 3e-12
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 64 IGIFGNSKAYKCYDISANRII 2
+G N+KAYK +D +++I
Sbjct: 696 LGYAENTKAYKLWDGDLHKVI 716
>ref|XP_005714683.1| unnamed protein product [Chondrus crispus]
gi|507111129|emb|CDF34864.1| unnamed protein product
[Chondrus crispus]
Length = 779
Score = 52.4 bits (124), Expect(3) = 6e-12
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -3
Query: 267 FWSDVIGTNNYLQNRIISKSINYKI-PFELWFDHTPDLTHIGIDSSRCSIKTAEPRLDKL 91
FW++ + Y++NR+ S++I K+ P+ LW P++ H+ + S+C + + KL
Sbjct: 606 FWAEALANAVYVRNRVTSRAIPPKMTPYHLWMKSVPNVGHLRVFGSKCWYTLPKHNIQKL 665
Query: 90 AARNKSCILLGYS 52
AR K + LGY+
Sbjct: 666 DARAKEAMFLGYA 678
Score = 43.1 bits (100), Expect(3) = 6e-12
Identities = 42/180 (23%), Positives = 66/180 (36%), Gaps = 61/180 (33%)
Frame = -2
Query: 688 KSWHQ*LSHASMAYLKKMKSEKIVLGFK-----DAEIGDFPN------YSSCLAEKQTRK 542
++WH+ +H + M + +V G K +I + N S+C+ K TR
Sbjct: 404 QTWHERFAHVHSQGIASMIRDNVVSGVKLLGNEANKINNTDNDCISEKCSACVYGKATRS 463
Query: 541 KNPA--SHHRSSSKLEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSYS------------ 404
P S R+ L+++H+ +CGP+ S Y++ IDD S++S
Sbjct: 464 VIPKERSSRRAYFCLDLVHSDVCGPLEVQSNGGAKYFITFIDDHSNWSVVYPMHHKSEAF 523
Query: 403 ------------------------------------FLIANGIHH*KTTSYMLQ*NDVVE 332
FLIANG H TT+Y + N V E
Sbjct: 524 ERYKMFAQLAQTHTGRKIKVLRTDRGGEYLSTEFKSFLIANGTQHQMTTAYTPEQNGVAE 583
Score = 21.2 bits (43), Expect(3) = 6e-12
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 64 IGIFGNSKAYKCYDISANRII 2
+G N+KAYK +D +++I
Sbjct: 675 LGYAENTKAYKLWDGDLHKVI 695
>ref|XP_005711125.1| unnamed protein product, partial [Chondrus crispus]
gi|507107329|emb|CDF40831.1| unnamed protein product,
partial [Chondrus crispus]
Length = 661
Score = 52.4 bits (124), Expect(3) = 8e-12
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -3
Query: 267 FWSDVIGTNNYLQNRIISKSINYKI-PFELWFDHTPDLTHIGIDSSRCSIKTAEPRLDKL 91
FW++ + Y++NR+ S++I K+ P+ LW P++ H+ + S+C + + KL
Sbjct: 497 FWAEALANAVYVRNRVTSRAIPPKMTPYHLWMKSVPNVGHLRVFGSKCWYTLPKHNIQKL 556
Query: 90 AARNKSCILLGYS 52
AR K + LGY+
Sbjct: 557 DARAKEAMFLGYA 569
Score = 42.7 bits (99), Expect(3) = 8e-12
Identities = 41/175 (23%), Positives = 67/175 (38%), Gaps = 56/175 (32%)
Frame = -2
Query: 688 KSWHQ*LSHASMAYLKKMKSEKIVLGFKDAEIGDFPN------YSSCLAEKQTRKKNPA- 530
++WH+ +H + S+ +LG + +I + N S+C+ K TR P
Sbjct: 308 QTWHERFAH--------VHSQVKLLGNEANKINNTDNDCISEKCSACVYGKATRSVIPKE 359
Query: 529 -SHHRSSSKLEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSYS----------------- 404
S R+ L+++H+ +CGP+ S+ Y++ IDD S++S
Sbjct: 360 RSSRRAYFCLDLVHSDVCGPLEVQSIGGAKYFITFIDDHSNWSVVYPIHHKSEAFERYKM 419
Query: 403 -------------------------------FLIANGIHH*KTTSYMLQ*NDVVE 332
FLIANG H TT+Y + N V E
Sbjct: 420 FAQLAQTHTGRKIKVLRTDRGGEYLSTEFKSFLIANGTQHQMTTAYTPEQNGVAE 474
Score = 21.2 bits (43), Expect(3) = 8e-12
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 64 IGIFGNSKAYKCYDISANRII 2
+G N+KAYK +D +++I
Sbjct: 566 LGYAENTKAYKLWDGDLHKVI 586
>ref|XP_005719306.1| unnamed protein product [Chondrus crispus]
gi|507115981|emb|CDF39395.1| unnamed protein product
[Chondrus crispus]
Length = 462
Score = 52.4 bits (124), Expect(2) = 2e-11
Identities = 22/77 (28%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = -3
Query: 279 LANKFWSDVIGTNNYLQNRIISKSINYKI-PFELWFDHTPDLTHIGIDSSRCSIKTAEPR 103
++ +FW++ + T+ Y++NR+ S+++ P +W + TP++ H+ + S+C +
Sbjct: 214 VSKRFWAEALATSIYVRNRVTSRALPVNTTPHHIWMNSTPNVGHLRVFGSKCWYTLPKLE 273
Query: 102 LDKLAARNKSCILLGYS 52
L KL R + + LGYS
Sbjct: 274 LRKLDLRAREAMFLGYS 290
Score = 43.5 bits (101), Expect(2) = 2e-11
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 26/142 (18%)
Frame = -2
Query: 679 HQ*LSHASMAYLKKMKSEKIVLGFK----DAEIGDFP---NYS----SCLAEKQTRKKNP 533
H+ ++H ++ + M +V G D +P N+S +C+ K TR P
Sbjct: 54 HERMAHVNVQGIASMIHNNVVSGINVRQSDVITAIYPTSDNHSFICPACVFGKATRSVIP 113
Query: 532 A--SHHRSSSKLEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSY-------------SFL 398
S R+ + L+++H+ +CGP+ S+ Y++ +DD S++ + L
Sbjct: 114 KQRSSSRAQNCLDLVHSDVCGPLEVQSVGSSRYFITFVDDHSTWVVVYTMRNKSEAKAHL 173
Query: 397 IANGIHH*KTTSYMLQ*NDVVE 332
NG H TT+Y + V E
Sbjct: 174 ELNGTQHQLTTAYNPEQKGVAE 195
>ref|XP_005710188.1| unnamed protein product [Chondrus crispus]
gi|507106227|emb|CDF39894.1| unnamed protein product
[Chondrus crispus]
Length = 1136
Score = 53.5 bits (127), Expect(2) = 3e-11
Identities = 23/81 (28%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = -3
Query: 279 LANKFWSDVIGTNNYLQNRIISKSINYKI-PFELWFDHTPDLTHIGIDSSRCSIKTAEPR 103
++ +FW++ + T+ Y++NR+ S+++ P +W + TP++ H+ + S+C +
Sbjct: 492 VSKRFWAEALATSVYVRNRVTSRTLPVNTTPHHIWMNSTPNVGHLRVFGSKCWYTLPKLE 551
Query: 102 LDKLAARNKSCILLGYSGIAK 40
L KL R + + LGYS +K
Sbjct: 552 LRKLDLRAREAMFLGYSQCSK 572
Score = 41.6 bits (96), Expect(2) = 3e-11
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 29/145 (20%)
Frame = -2
Query: 679 HQ*LSHASMAYLKKMKSEKIVLGFKDAEIGDFPNYSSCLAEKQTRKKNPA--SHHRSSSK 506
H+ ++H ++ + M +V G P +C+ K TR P S R+ +
Sbjct: 331 HERMAHVNVQGIASMIHNNVVSGINSDNHS--PICPACVFGKATRSVIPKQRSSSRAQNC 388
Query: 505 LEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSY--------------------------- 407
L+++H+ +CGP+ S+ ++ +DD S++
Sbjct: 389 LDLVHSDVCGPLEVQSIGGSRCFITFVDDHSNWLAQTHTGRKVKVLRTDRGGEYLSTEFK 448
Query: 406 SFLIANGIHH*KTTSYMLQ*NDVVE 332
S L NG H TT+Y+ + N V E
Sbjct: 449 SHLDLNGTQHQLTTAYIPEQNGVAE 473
>ref|XP_003223441.1| PREDICTED: copia protein-like [Anolis carolinensis]
Length = 937
Score = 50.4 bits (119), Expect(2) = 3e-11
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 18/138 (13%)
Frame = -2
Query: 682 WHQ*LSHASMAYLKKMKSEKIVLGFKDAEIGDFPNYSSCLAEKQTRKKNPASHHRSSSK- 506
WH+ H + +++ + + + + F C+ +K P + + S+K
Sbjct: 58 WHRRFGHRDANTILQLQKDNLATNLEISNTA-FDKCVVCVQQKAVSPSFPVNTEKRSTKI 116
Query: 505 LEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSYS-----------------FLIANGIHH 377
L++IH+ +CGP +T S +Y V +DDFS + FL NGI H
Sbjct: 117 LDLIHSDICGPFKT-SFGGNNYAVIFLDDFSKFCVSYILKDKSEAQDMLLWFLGENGIQH 175
Query: 376 *KTTSYMLQ*NDVVEGKI 323
K+ Y Q N V E K+
Sbjct: 176 IKSVPYTPQQNGVAERKL 193
Score = 44.7 bits (104), Expect(2) = 3e-11
Identities = 27/86 (31%), Positives = 41/86 (47%)
Frame = -3
Query: 282 SLANKFWSDVIGTNNYLQNRIISKSINYKIPFELWFDHTPDLTHIGIDSSRCSIKTAEPR 103
+L + W + T +LQNR+ +KS K PFELW + P + I S + +
Sbjct: 208 NLPDCLWGEAFATATFLQNRLPTKSAT-KTPFELWTGNVPSMKRIKKFGSIAYAYIPKQK 266
Query: 102 LDKLAARNKSCILLGYSGIAKPTNAM 25
KL R++ IL+GY+ K M
Sbjct: 267 RHKLDFRSEQTILVGYAPANKGYRVM 292
>ref|XP_005715938.1| unnamed protein product [Chondrus crispus]
gi|507112437|emb|CDF36119.1| unnamed protein product
[Chondrus crispus]
Length = 753
Score = 52.4 bits (124), Expect(3) = 3e-11
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -3
Query: 267 FWSDVIGTNNYLQNRIISKSINYKI-PFELWFDHTPDLTHIGIDSSRCSIKTAEPRLDKL 91
FW++ + Y++NR+ S++I K+ P+ LW P++ H+ + S+C + + KL
Sbjct: 603 FWAEALANAVYVRNRVTSRAIPPKMTPYHLWMKSVPNVGHLRVFGSKCWYTLPKHNIQKL 662
Query: 90 AARNKSCILLGYS 52
AR K + LGY+
Sbjct: 663 DARAKEAMFLGYA 675
Score = 40.8 bits (94), Expect(3) = 3e-11
Identities = 33/131 (25%), Positives = 49/131 (37%), Gaps = 50/131 (38%)
Frame = -2
Query: 574 SSCLAEKQTRKKNPA--SHHRSSSKLEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSYS- 404
S+C+ K TR P S R+ L+++H+ +CGP+ S+ Y++ IDD S++S
Sbjct: 450 SACVYGKATRSVIPKERSSRRAYFCLDLVHSDVCGPLEVQSIGGAKYFITFIDDHSNWSV 509
Query: 403 -----------------------------------------------FLIANGIHH*KTT 365
FLIANG H TT
Sbjct: 510 VYPMHHKSEAFERYKTFAQLAQTHTGRKIKVLRTDRGGEYLSTEFKSFLIANGTQHQMTT 569
Query: 364 SYMLQ*NDVVE 332
+Y + N V E
Sbjct: 570 AYTPEQNGVAE 580
Score = 21.2 bits (43), Expect(3) = 3e-11
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 64 IGIFGNSKAYKCYDISANRII 2
+G N+KAYK +D +++I
Sbjct: 672 LGYAENTKAYKLWDGDLHKVI 692
>emb|CAN78616.1| hypothetical protein VITISV_003658 [Vitis vinifera]
Length = 2172
Score = 46.2 bits (108), Expect(2) = 4e-10
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 18/136 (13%)
Frame = -2
Query: 679 HQ*LSHASMAYLKKMKSEKIVLGFKDAEIGDFPNYSSCLAEKQTRKKNPAS-HHRSSSKL 503
H L H S++ +KM L E SC K TR P ++R+ S
Sbjct: 1155 HNRLGHPSLSKFQKMVPRFSTLSSLPCE--------SCQLGKHTRVSFPKRLNNRAKSPF 1206
Query: 502 EIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSY-----------------SFLIANGIHH* 374
E++H + GP RT S Y+V IDD+S + SF+ +GI H
Sbjct: 1207 ELVHTDVWGPCRTASTLGFQYFVTFIDDYSRFRVLRSDNAREYFSAQFTSFMSHHGILHQ 1266
Query: 373 KTTSYMLQ*NDVVEGK 326
+ ++ Q N V E K
Sbjct: 1267 SSCAHTPQQNGVAERK 1282
Score = 45.1 bits (105), Expect(2) = 4e-10
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -3
Query: 270 KFWSDVIGTNNYLQNRIISKSINYKIPFELWFDHTP-DLTHIGIDSSRCSIKTAEPRLDK 94
+FW D + T YL NR+ S ++ +IP L F P + C + P DK
Sbjct: 1302 RFWGDAVLTACYLINRMPSSVLHDQIPHSLLFPDQPLYFLPPRVFGCTCFVHILTPGQDK 1361
Query: 93 LAARNKSCILLGYSGIAK 40
L+A+ C+ LGYS + K
Sbjct: 1362 LSAKAMKCLFLGYSRLQK 1379
>dbj|BAB02990.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1250
Score = 70.9 bits (172), Expect = 5e-10
Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Frame = -2
Query: 754 KSSNKLYKIEFE-------RAMLVKQE*KKSWHQ*LSHASMAYLKKMKSEKIVLGFKDAE 596
+S N+LYK+ E +AM++ K WH L H + LK M + +V+G E
Sbjct: 342 RSKNRLYKVLMEIEPPKCLQAMVLSNSAK--WHSRLGHIGVETLKTMVKKDLVIGMPQME 399
Query: 595 IGDFPNYSSCLAEKQTRKKNP-ASHHRSSSKLEIIHAYLCGPMRTLSLHRCSYYVCLIDD 419
+ D +SCL KQ K P AS +R++ LE+IH LCGP+ + R Y LIDD
Sbjct: 400 V-DKETCASCLLGKQVSKSFPQASSYRATQNLELIHGDLCGPITPPTSARNRYIFVLIDD 458
Query: 418 FSSYSFLI 395
S Y + I
Sbjct: 459 HSRYMWSI 466
>gb|AAK50413.1|AC021891_14 Putative retroelement [Oryza sativa Japonica Group]
Length = 1232
Score = 51.2 bits (121), Expect(2) = 8e-10
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = -3
Query: 270 KFWSDVIGTNNYLQNRIISKSINYKIPFELWFDHTPDLTHIGIDSSRCSIKTAEPRLDKL 91
KFW++ I T Y+ NR+ +S K +EL F H P ++H+ + +C + LDK
Sbjct: 703 KFWAEAINTACYISNRVFLRSKLGKTSYELRFGHQPKVSHLRVFGCKCFV-LKSGNLDKF 761
Query: 90 AARNKSCILLGY 55
AR+ + LGY
Sbjct: 762 EARSTDGLFLGY 773
Score = 38.9 bits (89), Expect(2) = 8e-10
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Frame = -2
Query: 682 WHQ*LSHASMAYLKKMKSEKIVLGF----KDAEIGDFP-NYSSCLAEKQTRKKNPASHHR 518
WH+ L H +L ++ +V G KD ++ P ++ +A T P
Sbjct: 553 WHRRLGHVGFDHLTRLSGLDLVRGLPKLKKDLDLICTPCRHAKMVASSHT----PIVSVM 608
Query: 517 SSSKLEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSYSFLI-----------ANGIHH*K 371
+ + +++H + GP R S+ Y + ++DDFS YS++ G+ H
Sbjct: 609 TDAPGQLLHMDIVGPARVQSVGGKWYVLVIVDDFSRYSWVFFMATKDEAFQHFRGLEHEF 668
Query: 370 TTSYMLQ*NDVVEGK 326
++ + Q N VVE K
Sbjct: 669 SSPRVPQQNGVVERK 683
>gb|ABB47538.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1222
Score = 51.2 bits (121), Expect(2) = 8e-10
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = -3
Query: 270 KFWSDVIGTNNYLQNRIISKSINYKIPFELWFDHTPDLTHIGIDSSRCSIKTAEPRLDKL 91
KFW++ I T Y+ NR+ +S K +EL F H P ++H+ + +C + LDK
Sbjct: 703 KFWAEAINTACYISNRVFLRSKLGKTSYELRFGHQPKVSHLRVFGCKCFV-LKSGNLDKF 761
Query: 90 AARNKSCILLGY 55
AR+ + LGY
Sbjct: 762 EARSTDGLFLGY 773
Score = 38.9 bits (89), Expect(2) = 8e-10
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Frame = -2
Query: 682 WHQ*LSHASMAYLKKMKSEKIVLGF----KDAEIGDFP-NYSSCLAEKQTRKKNPASHHR 518
WH+ L H +L ++ +V G KD ++ P ++ +A T P
Sbjct: 553 WHRRLGHVGFDHLTRLSGLDLVRGLPKLKKDLDLICTPCRHAKMVASSHT----PIVSVM 608
Query: 517 SSSKLEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSYSFLI-----------ANGIHH*K 371
+ + +++H + GP R S+ Y + ++DDFS YS++ G+ H
Sbjct: 609 TDAPGQLLHMDIVGPARVQSVGGKWYVLVIVDDFSRYSWVFFMATKDEAFQHFRGLEHEF 668
Query: 370 TTSYMLQ*NDVVEGK 326
++ + Q N VVE K
Sbjct: 669 SSPRVPQQNGVVERK 683
>gb|EFN60860.1| Copia protein [Camponotus floridanus]
Length = 92
Score = 69.7 bits (169), Expect = 1e-09
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = -3
Query: 282 SLANKFWSDVIGTNNYLQNRIISKSINYKIPFELWFDHTPDLTHIGIDSSRCSIKTAEPR 103
+L+ FW++ + T NY++NR +KS+N K PFE+W + P L H+ I + I +PR
Sbjct: 6 NLSTGFWAEAVSTANYVRNRCPTKSLNGKTPFEIWTNRVPSLKHLRIFGMKAYILNKDPR 65
Query: 102 LDKLAARNKSCILLGYSGIAK 40
K +R+K+ I +GYS +K
Sbjct: 66 KKKFDSRSKTGIFIGYSDKSK 86
>ref|XP_005710187.1| unnamed protein product [Chondrus crispus]
gi|507106226|emb|CDF39893.1| unnamed protein product
[Chondrus crispus]
Length = 1101
Score = 53.5 bits (127), Expect(2) = 2e-09
Identities = 23/81 (28%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = -3
Query: 279 LANKFWSDVIGTNNYLQNRIISKSINYKI-PFELWFDHTPDLTHIGIDSSRCSIKTAEPR 103
++ +FW++ + T+ Y++NR+ S+++ P +W + TP++ H+ + S+C +
Sbjct: 478 VSKRFWAEALATSVYVRNRVTSRTLPVNATPHHIWMNSTPNVGHLRVFGSKCWYTLPKLE 537
Query: 102 LDKLAARNKSCILLGYSGIAK 40
L KL R + + LGYS +K
Sbjct: 538 LRKLDLRAREAMFLGYSQCSK 558
Score = 35.4 bits (80), Expect(2) = 2e-09
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Frame = -2
Query: 679 HQ*LSHASMAYLKKMKSEKIVLGFKDAEIGDFPNYSSCLAEKQTRKKNPA--SHHRSSSK 506
H+ ++H ++ + M +V G P +C+ K TR P S R+ +
Sbjct: 362 HERMAHVNVQGIASMIHNNVVSGINSDNHS--PICPACVFGKATRSVIPKQRSSSRAQNC 419
Query: 505 LEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSYSFLIANGIHH*KTTSYMLQ*NDVVE 332
L+++H+ +CGP+ S I D NG H TT+Y+ + N V E
Sbjct: 420 LDLVHSDVCGPLEVQS----------IGDL--------NGTQHQLTTAYIPEQNGVAE 459
>emb|CAN74042.1| hypothetical protein VITISV_012948 [Vitis vinifera]
Length = 702
Score = 48.9 bits (115), Expect(2) = 2e-09
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -2
Query: 670 LSHASMAYLKKMKSEKIVLGFKDAEIGDFPNYSSCLAEKQTR-KKNPASHHRSSSKLEII 494
L H S +++++ E+I+ + DF Y C+ KQT +KN + R LE+I
Sbjct: 333 LGHISNQHIQRLVLERIL---DPLDFSDFQVYIECIKGKQTNIRKNDVN--RCGDVLELI 387
Query: 493 HAYLCGPMRTLSLHRCSYYVCLIDDFSSYSFL 398
H + GP T + Y++ IDD+S Y +L
Sbjct: 388 HTDIYGPFPTPYWNEQQYFITFIDDYSRYDYL 419
Score = 40.0 bits (92), Expect(2) = 2e-09
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = -3
Query: 282 SLANKFWSDVIGTNNYLQNRIISKSINYKIPFELWFDHTPDLTHIGIDSSRCSIKTAEPR 103
+L W + + T Y+ N + K+I K P+ELW P + H+ + +P
Sbjct: 457 TLPELLWGEAVKTAVYILNGVSRKAIA-KTPYELWTSKKPSIRHLHAWGCIADARPYKPN 515
Query: 102 LDKLAARNKSCILLGYS 52
KL +R S +GYS
Sbjct: 516 EKKLDSRTVSYYFVGYS 532
>gb|EOY19976.1| Retrotransposon protein, unclassified, putative [Theobroma cacao]
Length = 989
Score = 56.6 bits (135), Expect(2) = 2e-09
Identities = 25/81 (30%), Positives = 43/81 (53%)
Frame = -3
Query: 282 SLANKFWSDVIGTNNYLQNRIISKSINYKIPFELWFDHTPDLTHIGIDSSRCSIKTAEPR 103
+L FW++ + T NYL N ++ +N+K P+E+WF P H+ C K + +
Sbjct: 438 NLPRVFWAEAVNTANYLLNITYTRVLNFKTPYEMWFACKPSAAHLKTFGCVCYAKVPDEK 497
Query: 102 LDKLAARNKSCILLGYSGIAK 40
KL A++ + +GYS +K
Sbjct: 498 RSKLDAKSVLDVFIGYSERSK 518
Score = 32.0 bits (71), Expect(2) = 2e-09
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 17/155 (10%)
Frame = -2
Query: 739 LYKIEFERAMLVKQE*KKSWHQ*LSHASMAYLKKMKSEKIVLGFKDAEIGDFPNYSSCLA 560
L+KI + + + WH+ + H + L KM SE +V G D C
Sbjct: 271 LFKIGSAQCLTQLVDLSDVWHKRIGHVNFGSLIKMSSEVMVDGLLVIVKPDM-LCKVCQY 329
Query: 559 EKQTRKKNPASHH-RSSSKLEIIHAYLC----------------GPMRTLSLHRCSYYVC 431
KQ RK P ++ KLE++H M+ +L + +
Sbjct: 330 GKQCRKSFPKGRSWKAKKKLELVHLDKSEALMHFFKFKAIVENQAKMKIKTLRSDNGFEF 389
Query: 430 LIDDFSSYSFLIANGIHH*KTTSYMLQ*NDVVEGK 326
+ DF +FL G+ H T +Y Q N E K
Sbjct: 390 TVVDFE--AFLAQFGVEHWLTVTYSPQQNGASERK 422
>emb|CAN76274.1| hypothetical protein VITISV_008497 [Vitis vinifera]
Length = 1149
Score = 43.9 bits (102), Expect(2) = 5e-09
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 682 WHQ*LSHASMAYLKKMKSEKIVLGFKDAEIGDFPNYSSCLAEKQTRKKN-PASHHRSSSK 506
WH+ L H S +K + S+ + K DF SC+ KQ + + K
Sbjct: 378 WHRRLGHMSEKGMKMLLSKGKLPELKSI---DFDMCESCILGKQKKVSFLKTGRTPKAEK 434
Query: 505 LEIIHAYLCGPMRTLSLHRCSYYVCLIDDFSSYSFLIANGIH 380
LE++H L GP SL YY+ IDD S + IH
Sbjct: 435 LELVHTDLWGPSPVASLGGSRYYITFIDDSSRKGIRMEKTIH 476
Score = 43.5 bits (101), Expect(2) = 5e-09
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = -3
Query: 279 LANKFWSDVIGTNNYLQNRIISKSINYKIPFELWFDHTPDLTHIGIDSSRCSIKTAEPRL 100
L FW+D + T YL NR S + +++P E+W +H+ + +
Sbjct: 505 LPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFCCVSYVHIDSDAR 564
Query: 99 DKLAARNKSCILLGY 55
KL A++K C +GY
Sbjct: 565 SKLDAKSKICFFIGY 579