BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00010532
         (531 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Mo...    58   2e-06
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin...    58   2e-06
ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containin...    58   2e-06
ref|XP_002302837.1| hypothetical protein POPTR_0002s22250g [Popu...    57   2e-06
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...    55   8e-06

>gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
          Length = 556

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 49/139 (35%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
 Frame = +1

Query: 1   HLGPRLFDNSDIIRRQFTDQ-EHALELERKRLSELNLIDSQKRHGHFPQDNQACFISSTK 177
           H   R ++NS ++RRQF +Q E ALELE +RLS ++L          P +NQ  F     
Sbjct: 436 HSISRSYENSRLLRRQFMEQHERALELETRRLSGMHLAGK-------PVNNQPFF----- 483

Query: 178 GYNSHTVLHQQFTNGLAESEEETKPSEDLSNFTPTDHFGYLLDVLXXXXXXX---KHQEN 348
           GY                S +E K SED      TD    LLDVL          KH + 
Sbjct: 484 GY----------------SMDELKVSEDQFTLPSTDQVSRLLDVLNCGSTSDDKFKHTDT 527

Query: 349 KDIDSDSYIHNLPESPFAN 405
              D +S   NLP+SPFA+
Sbjct: 528 HFTDQESQALNLPDSPFAS 546


>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X4 [Citrus sinensis]
          Length = 578

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 45/142 (31%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
 Frame = +1

Query: 1   HLGPRLFDNSDIIRRQFTDQ-EHALELERKRLSELNLIDSQKRHGHFPQDNQACFISSTK 177
           H  PR+ +NS ++R+Q  ++ E A+ELER+RLSE+ L      H                
Sbjct: 455 HTMPRVCNNSRLLRKQLMEEHEQAIELERRRLSEMQLACKPMNH---------------- 498

Query: 178 GYNSHTVLHQQFTNGLAESEEETKPSEDLSNFTPTDHFGYLLDVL---XXXXXXXKHQEN 348
                   H  F   + E +    P+E   +F   + F YLLDVL           H   
Sbjct: 499 --------HSYFGYSMDELQVSEAPAEQ-GDFPSAERFNYLLDVLNNGSTSEDQVSHIST 549

Query: 349 KDIDSDSYIHNLPESPFANLTG 414
              D DS   NLPESPFA+  G
Sbjct: 550 HYNDQDSQGLNLPESPFASPIG 571


>ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X2 [Citrus sinensis]
          Length = 581

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 45/142 (31%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
 Frame = +1

Query: 1   HLGPRLFDNSDIIRRQFTDQ-EHALELERKRLSELNLIDSQKRHGHFPQDNQACFISSTK 177
           H  PR+ +NS ++R+Q  ++ E A+ELER+RLSE+ L      H                
Sbjct: 458 HTMPRVCNNSRLLRKQLMEEHEQAIELERRRLSEMQLACKPMNH---------------- 501

Query: 178 GYNSHTVLHQQFTNGLAESEEETKPSEDLSNFTPTDHFGYLLDVL---XXXXXXXKHQEN 348
                   H  F   + E +    P+E   +F   + F YLLDVL           H   
Sbjct: 502 --------HSYFGYSMDELQVSEAPAEQ-GDFPSAERFNYLLDVLNNGSTSEDQVSHIST 552

Query: 349 KDIDSDSYIHNLPESPFANLTG 414
              D DS   NLPESPFA+  G
Sbjct: 553 HYNDQDSQGLNLPESPFASPIG 574


>ref|XP_002302837.1| hypothetical protein POPTR_0002s22250g [Populus trichocarpa]
           gi|224147115|ref|XP_002336411.1| predicted protein
           [Populus trichocarpa] gi|222844563|gb|EEE82110.1|
           hypothetical protein POPTR_0002s22250g [Populus
           trichocarpa]
          Length = 140

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 49/144 (34%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
 Frame = +1

Query: 1   HLGPRLFDNSDIIRRQFTDQ-EHALELERKRLSELNLIDSQKRHGHFPQDNQACFISSTK 177
           H   R+ DNS  +R+QF ++ E  +ELER+RLSE           HF          S K
Sbjct: 19  HSALRVCDNSKSLRKQFMEEHEQEIELERRRLSEF----------HF----------SPK 58

Query: 178 GYNSHTVLHQQFTNGLAESEEETKPSEDLSNFTPTDHFGYLLDVL-XXXXXXXKHQENK- 351
             N H+ L          S +E K S + + F+  +HF Y  DVL        KH+  + 
Sbjct: 59  PLNRHSFL--------GHSMDELKLSGEQAEFSSAEHFNYWFDVLNNGSTSEEKHRHTRT 110

Query: 352 ---DIDSDSYIHNLPESPFANLTG 414
              D DS+  + NLPESPFA+  G
Sbjct: 111 SCSDQDSNQGV-NLPESPFASAIG 133


>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
           gi|223525472|gb|EEF28048.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 578

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 47/139 (33%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
 Frame = +1

Query: 1   HLGPRLFDNSDIIRRQFTDQ-EHALELERKRLSELNLIDSQKRHGHFPQDNQACFISSTK 177
           H  P + DNS ++R+Q  ++ EHALE ER+RL E +L                      K
Sbjct: 458 HPMPTISDNSRLLRKQLMEENEHALEFERRRLLEFHL--------------------GPK 497

Query: 178 GYNSHTVLHQQFTNGLAESEEETKPSEDLSNFTPTDHFGYLLDVL---XXXXXXXKHQEN 348
             N     HQ +   L  S +E K SE+ + F   + F YLLDVL          +    
Sbjct: 498 SLN-----HQSY---LGCSMDELKLSEEHAEFPSAERFNYLLDVLNNGSSSEGKFRRIST 549

Query: 349 KDIDSDSYIHNLPESPFAN 405
              D DS   NLPESPFA+
Sbjct: 550 NYNDQDSQGINLPESPFAS 568