BLASTX nr result

ID: Ephedra26_contig00010480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00010480
         (554 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE75665.1| unknown [Picea sitchensis]                              68   1e-09
ref|XP_004291818.1| PREDICTED: protein ACCUMULATION AND REPLICAT...    62   7e-08

>gb|ADE75665.1| unknown [Picea sitchensis]
          Length = 586

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
 Frame = -1

Query: 554 DSNVLSFLESLERGKGSPLXXXXXXXXXXXXXXXXIDSVKTNAIQALKKVFPLGKNHFAK 375
           DS+VLS+LE LE+G+GSPL                + +VK +AIQ LKKVFPLG     K
Sbjct: 268 DSSVLSYLERLEKGRGSPLAAAAAIVRIGAGAGAALGNVKASAIQTLKKVFPLGNKRGGK 327

Query: 374 PSTPSMSTDFIVEXXXXXXXSIK-----DTFEESKGSGNDADDFLDDSINSAXXXXXXXX 210
            +  +++     E         K     D +++ + S  D  +  D S  S         
Sbjct: 328 EARANIAPTISTEAKSTIDLPHKDYPNSDIYKQPRMSNGDISNLSDASEFSKPTTESWGE 387

Query: 209 XXXXXVEQELPTL--EWGKFSIAKIAGTSIIIGALVFAGMKYSRGRYS----LSTAPSNS 48
                 E+EL  L    G F + KI    +++G L  AG+ Y  G++S    L   P ++
Sbjct: 388 NSGAMGEEELFLLSKRIGSFGV-KIVCAGVVVGVLAIAGLGYLPGQHSSMKTLKEVPFST 446

Query: 47  QSSATVNFSS 18
                +N+ +
Sbjct: 447 TIGDNLNYGA 456


>ref|XP_004291818.1| PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 783

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 59/185 (31%), Positives = 78/185 (42%), Gaps = 4/185 (2%)
 Frame = -1

Query: 554 DSNVLSFLESLERGKGSPLXXXXXXXXXXXXXXXXIDSVKTNAIQALKKVFPLGKNHFAK 375
           D  VL +LE L+   GSPL                +DSVKT+AIQAL+KVFPLG+ +  K
Sbjct: 483 DPTVLRYLERLDGTNGSPLAAAAAIVRIGAEATAVLDSVKTSAIQALRKVFPLGQRY--K 540

Query: 374 PSTP----SMSTDFIVEXXXXXXXSIKDTFEESKGSGNDADDFLDDSINSAXXXXXXXXX 207
             TP     M+   + E          D  EES         + DDSI  A         
Sbjct: 541 NMTPQEDHEMNYSLLPEDSG-------DPVEES---------YEDDSIRVAEVSGRDGSV 584

Query: 206 XXXXVEQELPTLEWGKFSIAKIAGTSIIIGALVFAGMKYSRGRYSLSTAPSNSQSSATVN 27
                E      E  K +  KI    ++IG + FAG+KY  GR S S+      S  T  
Sbjct: 585 DTLKEES---ITEQIKDASLKIMCAGVVIGLMTFAGLKYLPGRSSSSSIRKELASVTTSE 641

Query: 26  FSSTE 12
            +S++
Sbjct: 642 VTSSD 646


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