BLASTX nr result

ID: Ephedra26_contig00010400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00010400
         (507 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76233.1| unknown [Picea sitchensis]                             179   9e-50
ref|XP_002987943.1| hypothetical protein SELMODRAFT_447140 [Sela...   125   4e-27
ref|XP_002991318.1| hypothetical protein SELMODRAFT_448362 [Sela...   125   4e-27
ref|XP_001785617.1| predicted protein [Physcomitrella patens] gi...   107   2e-21
ref|XP_001760235.1| predicted protein [Physcomitrella patens] gi...   106   3e-21

>gb|ADE76233.1| unknown [Picea sitchensis]
          Length = 440

 Score =  179 bits (453), Expect(2) = 9e-50
 Identities = 82/126 (65%), Positives = 101/126 (80%)
 Frame = -2

Query: 380 KKKGVPGLSLVADLH*LPYKRPNPHHEAEKIIPAILFLQHYSENNNSLY*FSNLGEALNW 201
           +KKG+PGLSLVAD   LPYK+PNPHHEAEKIIPA+LFLQHY ++N++LY FS   E   W
Sbjct: 171 EKKGIPGLSLVADQRYLPYKKPNPHHEAEKIIPALLFLQHYEQSNHTLYWFSRPDEISEW 230

Query: 200 AKGLLEAFNRHMKVKYIDLPETKNDSVCSKDAVVFSAGTKLYYVLGTDTNDWLREKVLQH 21
            KGLLEAF+    VKY++ P+ KN +VC +DA+VFSAGT L+YV   DTNDWLR+ +LQ+
Sbjct: 231 GKGLLEAFSMQTNVKYVEFPDKKNGTVCFEDAIVFSAGTSLHYVPDYDTNDWLRQHILQY 290

Query: 20  CSIPIV 3
           CSIPIV
Sbjct: 291 CSIPIV 296



 Score = 43.9 bits (102), Expect(2) = 9e-50
 Identities = 21/35 (60%), Positives = 23/35 (65%)
 Frame = -1

Query: 477 DLQLPRCLKMPNIMPVHGGRLTLPVKFEGCNMEKK 373
           +L LP+CLKMPN M   G RLTLPV    C  EKK
Sbjct: 139 NLLLPKCLKMPNFMRFSGERLTLPVMPSVCGQEKK 173


>ref|XP_002987943.1| hypothetical protein SELMODRAFT_447140 [Selaginella moellendorffii]
           gi|300144332|gb|EFJ11017.1| hypothetical protein
           SELMODRAFT_447140 [Selaginella moellendorffii]
          Length = 470

 Score =  125 bits (315), Expect = 4e-27
 Identities = 57/122 (46%), Positives = 83/122 (68%)
 Frame = -2

Query: 368 VPGLSLVADLH*LPYKRPNPHHEAEKIIPAILFLQHYSENNNSLY*FSNLGEALNWAKGL 189
           + G S++AD   LPY +PNPHHEAEK+IPA L   H+ +N+  LY F++  +  +WAKG 
Sbjct: 112 ITGTSMLADQRFLPYHKPNPHHEAEKLIPATLLAHHHLKNSTMLYWFASPADVSDWAKGF 171

Query: 188 LEAFNRHMKVKYIDLPETKNDSVCSKDAVVFSAGTKLYYVLGTDTNDWLREKVLQHCSIP 9
           L+A     KV+Y+ LP+  ++S+C +DA++FS  T + YV     N WLR+KVL +CS+P
Sbjct: 172 LQAMAMEDKVEYLQLPQQHHESICFQDAILFSPPTDVRYVPSHHHNSWLRDKVLGYCSLP 231

Query: 8   IV 3
           IV
Sbjct: 232 IV 233


>ref|XP_002991318.1| hypothetical protein SELMODRAFT_448362 [Selaginella moellendorffii]
           gi|300140898|gb|EFJ07616.1| hypothetical protein
           SELMODRAFT_448362 [Selaginella moellendorffii]
          Length = 256

 Score =  125 bits (315), Expect = 4e-27
 Identities = 57/122 (46%), Positives = 83/122 (68%)
 Frame = -2

Query: 368 VPGLSLVADLH*LPYKRPNPHHEAEKIIPAILFLQHYSENNNSLY*FSNLGEALNWAKGL 189
           + G S++AD   LPY +PNPHHEAEK+IPA L   H+ +N+  LY F++  +  +WAKG 
Sbjct: 108 ITGTSMLADQRFLPYHKPNPHHEAEKLIPATLLAHHHLKNSTMLYWFASPADVSDWAKGF 167

Query: 188 LEAFNRHMKVKYIDLPETKNDSVCSKDAVVFSAGTKLYYVLGTDTNDWLREKVLQHCSIP 9
           L+A     KV+Y+ LP+  ++S+C +DA++FS  T + YV     N WLR+KVL +CS+P
Sbjct: 168 LQAMAMEDKVEYLQLPQQHHESICFQDAILFSPPTDVRYVPSYHHNSWLRDKVLGYCSLP 227

Query: 8   IV 3
           IV
Sbjct: 228 IV 229


>ref|XP_001785617.1| predicted protein [Physcomitrella patens]
           gi|162662750|gb|EDQ49564.1| predicted protein
           [Physcomitrella patens]
          Length = 568

 Score =  107 bits (266), Expect = 2e-21
 Identities = 57/119 (47%), Positives = 77/119 (64%)
 Frame = -2

Query: 368 VPGLSLVADLH*LPYKRPNPHHEAEKIIPAILFLQHYSENNNSLY*FSNLGEALNWAKGL 189
           + GLSLVAD   LP  +PNPHHEAEK+IPA+L L+ +   + SL  F++  +   W  G 
Sbjct: 164 ISGLSLVADQRFLPAGKPNPHHEAEKLIPAVL-LKQFINQSASLQWFASKADVSVWGIGF 222

Query: 188 LEAFNRHMKVKYIDLPETKNDSVCSKDAVVFSAGTKLYYVLGTDTNDWLREKVLQHCSI 12
           LEAF    KV++ +LP  K+DS+C KDAV+FS  T   YV   +TN  LR +VL++C I
Sbjct: 223 LEAFGLQNKVRFHELPMHKDDSICFKDAVLFSPPTHSRYVPNKETNALLRTEVLRYCGI 281


>ref|XP_001760235.1| predicted protein [Physcomitrella patens]
           gi|162688615|gb|EDQ74991.1| predicted protein
           [Physcomitrella patens]
          Length = 603

 Score =  106 bits (265), Expect = 3e-21
 Identities = 53/127 (41%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
 Frame = -2

Query: 368 VPGLSLVADLH*LPYKR---PNPHHEAEKIIPAILFLQHYSENNNSLY*FSNLGEAL--N 204
           + GL +VAD+  +P+ +   PNPHHEAEK+IPA+L    Y   N++LY F++        
Sbjct: 189 IRGLQMVADVKLMPHGKKVGPNPHHEAEKLIPAVLLSHLYGLRNSTLYWFAHRDPKTISR 248

Query: 203 WAKGLLEAFNRHMKVKYIDLPETKNDSVCSKDAVVFSAGTKLYYVLGTDTNDWLREKVLQ 24
           W+ GL++ F   MKV+++D+P      +C +DA++FS  T   YV G + N WLREKVL 
Sbjct: 249 WSLGLIKVFLETMKVEFMDVPGPDEPQICFEDAILFSGLTNAGYVPGREANAWLREKVLG 308

Query: 23  HCSIPIV 3
            C+IP++
Sbjct: 309 FCNIPVL 315


Top