BLASTX nr result

ID: Ephedra26_contig00010385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00010385
         (422 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006848543.1| hypothetical protein AMTR_s00169p00037240 [A...    74   2e-11
ref|XP_001775776.1| predicted protein [Physcomitrella patens] gi...    66   5e-09
ref|XP_001755132.1| predicted protein [Physcomitrella patens] gi...    62   1e-07
ref|XP_001771374.1| predicted protein [Physcomitrella patens] gi...    61   1e-07
ref|XP_001760791.1| predicted protein [Physcomitrella patens] gi...    61   2e-07
ref|XP_004144185.1| PREDICTED: F-box/ankyrin repeat protein SKIP...    57   3e-06
ref|XP_006478490.1| PREDICTED: F-box/ankyrin repeat protein SKIP...    56   4e-06

>ref|XP_006848543.1| hypothetical protein AMTR_s00169p00037240 [Amborella trichopoda]
           gi|548851856|gb|ERN10124.1| hypothetical protein
           AMTR_s00169p00037240 [Amborella trichopoda]
          Length = 701

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/57 (59%), Positives = 43/57 (75%)
 Frame = -1

Query: 422 ECKEASGHLLSQWLRGQLVEASWRLGSGIFSSQEEILNQSKEDLLAVLESNLPVFLL 252
           EC EA G LLSQWLRGQLVEA WRL    F S +++  +SK++LL +LES+LP FL+
Sbjct: 640 ECVEAGGQLLSQWLRGQLVEAVWRLEGAAFGSVDQLCGRSKDELLTILESHLPSFLI 696


>ref|XP_001775776.1| predicted protein [Physcomitrella patens]
           gi|162672928|gb|EDQ59459.1| predicted protein
           [Physcomitrella patens]
          Length = 553

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 36/60 (60%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = -1

Query: 422 ECKEASGHLLSQWLRGQLVEASWRLGSGIFSSQEEI-LNQSKEDLLAVLESNLPVFLLNN 246
           EC  ASG +LSQWLRGQLVEA+ RL  G   S EE+ L  SK +LL++LES LP FLL +
Sbjct: 492 ECVAASGVVLSQWLRGQLVEAALRLNQGNLRSTEEVFLKLSKHELLSILESRLPGFLLTS 551


>ref|XP_001755132.1| predicted protein [Physcomitrella patens]
           gi|162693725|gb|EDQ80076.1| predicted protein
           [Physcomitrella patens]
          Length = 520

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -1

Query: 422 ECKEASGHLLSQWLRGQLVEASWRLGSG-IFSSQEEILNQSKEDLLAVLESNLPVFLL 252
           EC  +SG +LSQWLRGQLVEA+ RL  G + SS+E  +  SK +LL +LES LP F+L
Sbjct: 458 ECMASSGVVLSQWLRGQLVEAALRLNEGDLCSSEELFMKCSKHELLLILESRLPGFVL 515


>ref|XP_001771374.1| predicted protein [Physcomitrella patens]
           gi|162677292|gb|EDQ63764.1| predicted protein
           [Physcomitrella patens]
          Length = 535

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/58 (60%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = -1

Query: 422 ECKEASGHLLSQWLRGQLVEASWRLG-SGIFSSQEEILNQSKEDLLAVLESNLPVFLL 252
           EC  ASG +LSQ LRGQLVEA+ RL   G+F ++E +L  SK +LL+VLES LP FLL
Sbjct: 473 ECVAASGVILSQLLRGQLVEAAVRLNQGGLFFTEEMLLKFSKHELLSVLESRLPGFLL 530


>ref|XP_001760791.1| predicted protein [Physcomitrella patens]
           gi|162688151|gb|EDQ74530.1| predicted protein
           [Physcomitrella patens]
          Length = 545

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/58 (55%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = -1

Query: 422 ECKEASGHLLSQWLRGQLVEASWRLGS-GIFSSQEEILNQSKEDLLAVLESNLPVFLL 252
           EC  +SG +LSQWLRGQLVEA+ RL   G+ SS+E ++  SK +LL++L+S LP F+L
Sbjct: 486 ECIASSGVVLSQWLRGQLVEAALRLNQVGLRSSEEVLVKCSKHELLSILKSRLPGFML 543


>ref|XP_004144185.1| PREDICTED: F-box/ankyrin repeat protein SKIP35-like [Cucumis
           sativus] gi|449489214|ref|XP_004158248.1| PREDICTED:
           F-box/ankyrin repeat protein SKIP35-like [Cucumis
           sativus]
          Length = 623

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/60 (55%), Positives = 42/60 (70%)
 Frame = -1

Query: 422 ECKEASGHLLSQWLRGQLVEASWRLGSGIFSSQEEILNQSKEDLLAVLESNLPVFLLNNF 243
           EC + +G+L SQ LRGQLVEA+ RLG G+    EE+ N    +LLAVLE +LP FLL+ F
Sbjct: 566 ECIKVNGYLFSQKLRGQLVEAARRLGGGVL---EEVSN--GRELLAVLEHHLPPFLLHKF 620


>ref|XP_006478490.1| PREDICTED: F-box/ankyrin repeat protein SKIP35-like [Citrus
           sinensis]
          Length = 626

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/61 (54%), Positives = 40/61 (65%)
 Frame = -1

Query: 422 ECKEASGHLLSQWLRGQLVEASWRLGSGIFSSQEEILNQSKEDLLAVLESNLPVFLLNNF 243
           EC +A GHLLSQ LRGQLVEA  RLG G+    EE+     + LLA+LE +LP FL+   
Sbjct: 569 ECVKAGGHLLSQRLRGQLVEAVRRLGGGVL---EEV--SHGKQLLAILEHHLPPFLVQPA 623

Query: 242 C 240
           C
Sbjct: 624 C 624


Top