BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00010001
         (1439 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi...   425   e-116
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]   425   e-116
gb|EXB80291.1| hypothetical protein L484_025147 [Morus notabilis]     419   e-114
gb|EMJ25531.1| hypothetical protein PRUPE_ppa020554mg, partial [...   419   e-114
ref|XP_004955359.1| PREDICTED: pentatricopeptide repeat-containi...   414   e-113
ref|XP_004508090.1| PREDICTED: pentatricopeptide repeat-containi...   413   e-113
ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containi...   412   e-112
ref|XP_002519315.1| pentatricopeptide repeat-containing protein,...   411   e-112
ref|XP_006647081.1| PREDICTED: pentatricopeptide repeat-containi...   410   e-112
gb|EOY06895.1| Tetratricopeptide repeat (TPR)-like superfamily p...   410   e-112
ref|XP_002461350.1| hypothetical protein SORBIDRAFT_02g001400 [S...   410   e-112
ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containi...   409   e-111
ref|NP_187294.1| pentatricopeptide repeat-containing protein [Ar...   408   e-111
gb|ACG30078.1| PPR2 [Zea mays]                                        408   e-111
ref|NP_001169349.1| pentatricopeptide repeat 2 [Zea mays] gi|309...   408   e-111
ref|XP_006407947.1| hypothetical protein EUTSA_v10020626mg [Eutr...   407   e-111
ref|XP_002884579.1| EMB2750 [Arabidopsis lyrata subsp. lyrata] g...   407   e-111
ref|XP_002316075.2| hypothetical protein POPTR_0010s16360g [Popu...   406   e-110
gb|EEC75100.1| hypothetical protein OsI_11265 [Oryza sativa Indi...   406   e-110
ref|XP_006600379.1| PREDICTED: pentatricopeptide repeat-containi...   405   e-110

>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
            chloroplastic [Vitis vinifera]
          Length = 498

 Score =  425 bits (1093), Expect = e-116
 Identities = 201/408 (49%), Positives = 282/408 (69%), Gaps = 4/408 (0%)
 Frame = +2

Query: 122  EGSVVSSPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQP 289
            EG    +PI  +KK   +++ A     T+ E L   +  K W QAL++F+MLR+QP YQP
Sbjct: 83   EGRSRKTPIKNIKKKLDRKNDAKAWANTVAEALSDLVLKKQWLQALEVFEMLREQPFYQP 142

Query: 290  NIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLF 469
              GTY +LL LLG+  QP   H +F+TM E+GCEP +E  TA++++Y R   +D AFS+ 
Sbjct: 143  KEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSIL 202

Query: 470  QEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGK 649
             +MK+ P CQPDVFTYS L++ C++AS+F+ V  L EEM    I PNTVT+NI++ GYGK
Sbjct: 203  NQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGK 262

Query: 650  AGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIR 829
            AG+F EME VL  ML S S  PDVWTMN ++ +FGN+G+IE MEKWYEKF  +GIEP+ R
Sbjct: 263  AGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETR 322

Query: 830  TFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQM 1009
            TF ILI +YG+  +YDKM+SVMEYM K   PWTT+TYN VI AF + G+ K ++  F+QM
Sbjct: 323  TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQM 382

Query: 1010 ILDGVKPDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDT 1189
              +G+K D+ T C LI  YA A +FHK+   V+ A +F+I  +T ++NA+I AC KA+D 
Sbjct: 383  RAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFEIPENTSFYNAVISACAKAEDL 442

Query: 1190 AQMEMVYREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
             +ME V+  M+ K C PDS T++I++ AY  +G+++K+  +E++ Q +
Sbjct: 443  IEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDKIYDLEQERQRM 490


>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
          Length = 525

 Score =  425 bits (1093), Expect = e-116
 Identities = 201/408 (49%), Positives = 282/408 (69%), Gaps = 4/408 (0%)
 Frame = +2

Query: 122  EGSVVSSPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQP 289
            EG    +PI  +KK   +++ A     T+ E L   +  K W QAL++F+MLR+QP YQP
Sbjct: 83   EGRSRKTPIKNIKKKLDRKNDAKAWANTVAEALSDLVLKKQWLQALEVFEMLREQPFYQP 142

Query: 290  NIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLF 469
              GTY +LL LLG+  QP   H +F+TM E+GCEP +E  TA++++Y R   +D AFS+ 
Sbjct: 143  KEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSIL 202

Query: 470  QEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGK 649
             +MK+ P CQPDVFTYS L++ C++AS+F+ V  L EEM    I PNTVT+NI++ GYGK
Sbjct: 203  NQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGK 262

Query: 650  AGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIR 829
            AG+F EME VL  ML S S  PDVWTMN ++ +FGN+G+IE MEKWYEKF  +GIEP+ R
Sbjct: 263  AGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETR 322

Query: 830  TFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQM 1009
            TF ILI +YG+  +YDKM+SVMEYM K   PWTT+TYN VI AF + G+ K ++  F+QM
Sbjct: 323  TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFSDVGDAKNMEYTFDQM 382

Query: 1010 ILDGVKPDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDT 1189
              +G+K D+ T C LI  YA A +FHK+   V+ A +F+I  +T ++NA+I AC KA+D 
Sbjct: 383  RAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFEIPENTSFYNAVISACAKAEDL 442

Query: 1190 AQMEMVYREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
             +ME V+  M+ K C PDS T++I++ AY  +G+++K+  +E++ Q +
Sbjct: 443  IEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDKIYDLEQERQRM 490


>gb|EXB80291.1| hypothetical protein L484_025147 [Morus notabilis]
          Length = 509

 Score =  419 bits (1077), Expect = e-114
 Identities = 201/406 (49%), Positives = 282/406 (69%), Gaps = 4/406 (0%)
 Frame = +2

Query: 140  SPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 307
            +PI  VKK   +++ A     T+ ETL   I  K W QAL++F MLR+QP YQP  GTY 
Sbjct: 88   TPIKNVKKKLDRKNKAKAWVNTVTETLFERIQNKQWLQALEVFHMLREQPFYQPKEGTYI 147

Query: 308  QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQEMKSN 487
            +LL LLGR  QP     +F+TM E+  +P SE  TA++SAY R G ++ AFS F +MK+ 
Sbjct: 148  KLLVLLGRSGQPHQARQLFDTMVEEELDPSSELYTALLSAYCRNGLIEEAFSTFDKMKTL 207

Query: 488  PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 667
            P+CQPDVFTYS LI+ C++A +F  V  L +EM    I PNTVT+NI++ GYG+AG+F E
Sbjct: 208  PNCQPDVFTYSTLIKACVDALQFDLVESLYKEMDERQITPNTVTQNIVLSGYGRAGKFDE 267

Query: 668  MENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILI 847
            ME VL  ML S +C PDVWTMN ++ VFGN G+I+ MEKWYEKF  +GIEP+ RTF ILI
Sbjct: 268  MEKVLSGMLESTTCKPDVWTMNIILSVFGNMGQIDMMEKWYEKFRDFGIEPETRTFNILI 327

Query: 848  SSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1027
             +YG+  +YDKM++VMEYM K   PWTT+TYN VI AF + G+ K ++  F QM  +G++
Sbjct: 328  GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKHMECTFEQMRTEGMR 387

Query: 1028 PDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTAQMEMV 1207
             D+ T C LIN YA A +FHK+   V+ A +F+I  +T ++N++I AC KA+D  +ME V
Sbjct: 388  ADTKTFCCLINGYANAGLFHKVISSVQLAGKFEIPENTSFYNSVISACAKAEDLIEMERV 447

Query: 1208 YREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQELSSVA 1345
            ++ M+ K C P+S T++I++ AY  +G+++K+ ++E++ QEL  +A
Sbjct: 448  FKRMKDKKCLPNSTTYSIMVEAYRKEGMNDKIYYLEQERQELEIMA 493



 Score =  136 bits (343), Expect = 2e-29
 Identities = 87/302 (28%), Positives = 146/302 (48%)
 Frame = +2

Query: 236  QQALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTA 415
            ++A   F  ++  P  QP++ TY  L+       Q + V S++  M E    P++     
Sbjct: 195  EEAFSTFDKMKTLPNCQPDVFTYSTLIKACVDALQFDLVESLYKEMDERQITPNTVTQNI 254

Query: 416  VISAYARKGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAM 595
            V+S Y R G  D    +   M  + +C+PDV+T +I++       +   + +  E+    
Sbjct: 255  VLSGYGRAGKFDEMEKVLSGMLESTTCKPDVWTMNIILSVFGNMGQIDMMEKWYEKFRDF 314

Query: 596  GILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIET 775
            GI P T T NILI  YGK   + +M  V+ E +          T NNVI  F + G+ + 
Sbjct: 315  GIEPETRTFNILIGAYGKKRMYDKMSTVM-EYMRKLQFPWTTSTYNNVIEAFADVGDAKH 373

Query: 776  MEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIH 955
            ME  +E+  T G+  D +TF  LI+ Y  AGL+ K+ S ++   K  +P  T+ YN VI 
Sbjct: 374  MECTFEQMRTEGMRADTKTFCCLINGYANAGLFHKVISSVQLAGKFEIPENTSFYNSVIS 433

Query: 956  AFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIP 1135
            A     ++ +++ VF +M      P+S T   ++ AY +  M  K+  + +  +  +I+ 
Sbjct: 434  ACAKAEDLIEMERVFKRMKDKKCLPNSTTYSIMVEAYRKEGMNDKIYYLEQERQELEIMA 493

Query: 1136 DT 1141
            DT
Sbjct: 494  DT 495


>gb|EMJ25531.1| hypothetical protein PRUPE_ppa020554mg, partial [Prunus persica]
          Length = 485

 Score =  419 bits (1076), Expect = e-114
 Identities = 199/404 (49%), Positives = 282/404 (69%), Gaps = 4/404 (0%)
 Frame = +2

Query: 125  GSVVSSPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPN 292
            G+   +P+  VKK   +++ A     T+ E L   I  K W QAL++F MLR+QP YQP 
Sbjct: 79   GTYRRAPLKNVKKKLDRKNNAKAWANTVTEALSDAIDKKQWLQALEVFDMLREQPFYQPK 138

Query: 293  IGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQ 472
             GTY +LL LLGR  QP     +F+ M E+GCEP  E  TA+++AY R   +D AFS+  
Sbjct: 139  EGTYMKLLGLLGRCGQPHRARQLFDAMVEEGCEPTLELYTALLTAYCRNNLIDEAFSVLN 198

Query: 473  EMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKA 652
            +MK+ P CQPDVFTYS LI+ C++A KF+ V  L EEM+   I PNTVT+NI++ GYGKA
Sbjct: 199  QMKTLPHCQPDVFTYSTLIKVCIDALKFELVESLYEEMAERLITPNTVTQNIVLSGYGKA 258

Query: 653  GRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRT 832
            G++ +ME VL  ML   +C PDVWTMN ++ VFGN+G+I+ ME+WYEKF  +GIEP+ RT
Sbjct: 259  GKYDQMEKVLSGMLEGATCKPDVWTMNVILSVFGNKGQIDMMERWYEKFRDFGIEPETRT 318

Query: 833  FEILISSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMI 1012
            F ILI +YG+  LYDKM++VMEYM K   PWTTATYN VI AF + G+ K ++  F+QM 
Sbjct: 319  FNILIGAYGKKKLYDKMSTVMEYMRKLQFPWTTATYNNVIEAFADVGDAKNMEYTFDQMR 378

Query: 1013 LDGVKPDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTA 1192
             +G+K D+ T C LIN YA A +FHK+   V+ A +F+I  +T ++NA+I AC KA+D  
Sbjct: 379  AEGMKADTKTFCCLINGYANAGLFHKVVSSVQLAGKFEIPENTTFYNAVIAACAKAEDLM 438

Query: 1193 QMEMVYREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQM 1324
            +ME V++ M++K C PDS T+++++ AYS +G+++K+ ++E+++
Sbjct: 439  EMERVFKRMKEKQCPPDSTTYSLMVEAYSKEGMNDKIYYLEQEI 482



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 80/348 (22%), Positives = 144/348 (41%), Gaps = 4/348 (1%)
 Frame = +2

Query: 296  GTYRQ--LLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLF 469
            GTYR+  L ++  + ++  +  +  NT+ E           A+  A  +K +L  A  +F
Sbjct: 79   GTYRRAPLKNVKKKLDRKNNAKAWANTVTE-----------ALSDAIDKKQWLQ-ALEVF 126

Query: 470  QEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGK 649
              ++  P  QP   TY  L+       +     +L + M   G  P       L+  Y +
Sbjct: 127  DMLREQPFYQPKEGTYMKLLGLLGRCGQPHRARQLFDAMVEEGCEPTLELYTALLTAYCR 186

Query: 650  AGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIR 829
                 E  +VL +M T   C PDV+T + +I+                      +  D  
Sbjct: 187  NNLIDEAFSVLNQMKTLPHCQPDVFTYSTLIK----------------------VCIDAL 224

Query: 830  TFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQM 1009
             FE++ S      LY++MA  +       +   T T N+V+  +   G+  Q++ V + M
Sbjct: 225  KFELVES------LYEEMAERL-------ITPNTVTQNIVLSGYGKAGKYDQMEKVLSGM 271

Query: 1010 ILDGV--KPDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQ 1183
             L+G   KPD  T   +++ +        +++  +    F I P+T  FN LI A  K +
Sbjct: 272  -LEGATCKPDVWTMNVILSVFGNKGQIDMMERWYEKFRDFGIEPETRTFNILIGAYGKKK 330

Query: 1184 DTAQMEMVYREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQ 1327
               +M  V   M+K      + T+N +I A++  G ++ + +   QM+
Sbjct: 331  LYDKMSTVMEYMRKLQFPWTTATYNNVIEAFADVGDAKNMEYTFDQMR 378



 Score = 68.6 bits (166), Expect = 6e-09
 Identities = 61/264 (23%), Positives = 119/264 (45%), Gaps = 5/264 (1%)
 Frame = +2

Query: 557  KCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCI-PDVWTMN 733
            K V + L+  +      NTVT+  L     K    Q +E  + +ML  +    P   T  
Sbjct: 87   KNVKKKLDRKNNAKAWANTVTE-ALSDAIDKKQWLQALE--VFDMLREQPFYQPKEGTYM 143

Query: 734  NVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKT 913
             ++ + G  G+     + ++     G EP +  +  L+++Y +  L D+  SV+  M   
Sbjct: 144  KLLGLLGRCGQPHRARQLFDAMVEEGCEPTLELYTALLTAYCRNNLIDEAFSVLNQMK-- 201

Query: 914  SLPWTTA---TYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMF 1084
            +LP       TY+ +I    +  + + ++ ++ +M    + P++ T   +++ Y +A  +
Sbjct: 202  TLPHCQPDVFTYSTLIKVCIDALKFELVESLYEEMAERLITPNTVTQNIVLSGYGKAGKY 261

Query: 1085 HKLKKVVK-YAERFDIIPDTPYFNALIDACHKAQDTAQMEMVYREMQKKGCAPDSVTFNI 1261
             +++KV+    E     PD    N ++           ME  Y + +  G  P++ TFNI
Sbjct: 262  DQMEKVLSGMLEGATCKPDVWTMNVILSVFGNKGQIDMMERWYEKFRDFGIEPETRTFNI 321

Query: 1262 LINAYSSKGISEKVRHVEKQMQEL 1333
            LI AY  K + +K+  V + M++L
Sbjct: 322  LIGAYGKKKLYDKMSTVMEYMRKL 345


>ref|XP_004955359.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
            chloroplastic-like isoform X1 [Setaria italica]
          Length = 571

 Score =  414 bits (1064), Expect = e-113
 Identities = 193/398 (48%), Positives = 277/398 (69%), Gaps = 4/398 (1%)
 Frame = +2

Query: 122  EGSVVSSPIVQVKKA----AIKRHTAMTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQP 289
            +     +PI  VKK     A  +  A T+ E L   I +KNW++AL++F+ML++QP Y P
Sbjct: 156  DSKAARTPIKNVKKRLDARADAKAWACTVTEALADRINSKNWKEALQVFEMLKEQPFYHP 215

Query: 290  NIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLF 469
              GTY +L+ LLGR  Q    H +FN M + GC+P  E  TA+I AY R G +D+A  L 
Sbjct: 216  KEGTYMKLIVLLGRSGQAAQAHQLFNEMLQQGCQPTPELYTALIGAYCRSGLMDDALQLL 275

Query: 470  QEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGK 649
             +MKS+P CQPDV+TYS +I+ C++A++F  +  + ++M+   I PNTVT+NI++ GYGK
Sbjct: 276  TDMKSSPLCQPDVYTYSTIIKACVDATRFDLIDAMYKDMAERLISPNTVTQNIVLSGYGK 335

Query: 650  AGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIR 829
            AGR  +ME VL +ML S +C PDVWTMN ++ +FGN G+IE+MEKWYEKF +YGIEP+ R
Sbjct: 336  AGRLDDMERVLSDMLDSTTCKPDVWTMNIILSLFGNMGQIESMEKWYEKFRSYGIEPETR 395

Query: 830  TFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQM 1009
            T  ILI +YG+  +YDKM++VMEYM K + PWTTATYN VI AF   G+ K ++  FNQM
Sbjct: 396  TLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATYNNVIEAFAEAGDAKNMEHTFNQM 455

Query: 1010 ILDGVKPDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDT 1189
              +G+KPD+ T C LIN +++A +FHK+  +VK AER D+  +T + NA+++AC KA D 
Sbjct: 456  RSEGMKPDTKTFCCLINGFSKAGLFHKVVGMVKLAERLDVPANTSFHNAILEACAKADDL 515

Query: 1190 AQMEMVYREMQKKGCAPDSVTFNILINAYSSKGISEKV 1303
             +ME V+  M+ K C PD++T++IL+ AY  +G+++K+
Sbjct: 516  MEMERVFMHMKHKQCDPDAMTYSILVEAYRKEGMTDKI 553



 Score =  132 bits (331), Expect = 5e-28
 Identities = 81/294 (27%), Positives = 142/294 (48%), Gaps = 1/294 (0%)
 Frame = +2

Query: 455  AFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILI 634
            A  +F+ +K  P   P   TY  LI     + +     +L  EM   G  P       LI
Sbjct: 200  ALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQAAQAHQLFNEMLQQGCQPTPELYTALI 259

Query: 635  RGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGI 814
              Y ++G   +   +L +M +S  C PDV+T + +I+   +    + ++  Y+      I
Sbjct: 260  GAYCRSGLMDDALQLLTDMKSSPLCQPDVYTYSTIIKACVDATRFDLIDAMYKDMAERLI 319

Query: 815  EPDIRTFEILISSYGQAGLYDKMASVM-EYMHKTSLPWTTATYNVVIHAFKNTGEIKQID 991
             P+  T  I++S YG+AG  D M  V+ + +  T+      T N+++  F N G+I+ ++
Sbjct: 320  SPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSTTCKPDVWTMNIILSLFGNMGQIESME 379

Query: 992  PVFNQMILDGVKPDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDAC 1171
              + +    G++P++ T   LI AY +  M+ K+  V++Y  +      T  +N +I+A 
Sbjct: 380  KWYEKFRSYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATYNNVIEAF 439

Query: 1172 HKAQDTAQMEMVYREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
             +A D   ME  + +M+ +G  PD+ TF  LIN +S  G+  KV  + K  + L
Sbjct: 440  AEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGFSKAGLFHKVVGMVKLAERL 493


>ref|XP_004508090.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
            chloroplastic-like [Cicer arietinum]
          Length = 499

 Score =  413 bits (1062), Expect = e-113
 Identities = 198/407 (48%), Positives = 276/407 (67%), Gaps = 4/407 (0%)
 Frame = +2

Query: 125  GSVVSSPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPN 292
            GS   SPI  +KK   +++ A     T+ E L   I  K W QAL+ F MLR+Q  YQP 
Sbjct: 77   GSTKRSPIKNLKKKLDRKNDAKAWVNTVTEALSECIDKKQWLQALQTFDMLREQSFYQPR 136

Query: 293  IGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQ 472
             GTY +L+ LLGR +QP     +F TM E+GC+P  E  TA+++AY R   +D A S+  
Sbjct: 137  EGTYMKLIVLLGRSSQPHRARQLFTTMIEEGCDPTPELYTALLAAYCRSNMIDEALSILN 196

Query: 473  EMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKA 652
            EMK++P CQPDVFTYS LI+ C++A KF+ V  + EEM+   I+PNTVT+NI++ GYGKA
Sbjct: 197  EMKNHPLCQPDVFTYSTLIKVCVDAFKFELVELMYEEMAQRSIMPNTVTQNIVLSGYGKA 256

Query: 653  GRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRT 832
            G F +ME VL  ML S SC PDVWTMN +I VFGN G+I+ MEKWYEKF  +GIEP+ RT
Sbjct: 257  GMFDQMEKVLSSMLQSTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRT 316

Query: 833  FEILISSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMI 1012
            F ILI +YG+  +YDKM+SVMEYM K   PWTT+TYN VI AF + G+ K ++  FNQM 
Sbjct: 317  FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIDAFADAGDAKNMEYTFNQMR 376

Query: 1013 LDGVKPDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTA 1192
             +G++ D+ T C LIN +A A +FHK+   V  A + +   +T ++NA++ AC KA+D  
Sbjct: 377  SEGMRADTKTFCCLINGFANAGLFHKVISSVHLAAKLETPENTAFYNAVLSACAKAEDLM 436

Query: 1193 QMEMVYREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
            +ME V++ M+   C PD+ T++I++ AY  +G+S+K+ ++E++ Q +
Sbjct: 437  EMERVFKRMKDNQCQPDNTTYSIMVKAYRKQGMSDKIYYLEQEKQTM 483


>ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
            chloroplastic-like [Glycine max]
          Length = 488

 Score =  412 bits (1059), Expect = e-112
 Identities = 197/402 (49%), Positives = 274/402 (68%), Gaps = 4/402 (0%)
 Frame = +2

Query: 140  SPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 307
            +P+  +KK   K++ A     T+ E+L   I+ K+W QAL++F MLR+Q  YQP  GTY 
Sbjct: 71   TPLKNLKKKFDKKNDAKAWVNTVTESLSERIHNKHWLQALQVFDMLREQTFYQPKEGTYM 130

Query: 308  QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQEMKSN 487
            +L+ LLG+  QP   H +F TM E+G EP  E  TA+++AY R   +D AFS+  EMK  
Sbjct: 131  KLIVLLGKSGQPHRAHQLFTTMIEEGLEPTPELYTALLAAYCRSNMIDEAFSVLNEMKKL 190

Query: 488  PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 667
            P CQPDVFTYS LI+ C++A KF  V  L EEM+   I+PNTVT+NI++ GYGKAG F +
Sbjct: 191  PRCQPDVFTYSTLIKVCVDAFKFDLVELLYEEMAERSIMPNTVTQNIVLGGYGKAGMFDQ 250

Query: 668  MENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILI 847
            ME VL  ML S +C PDVWTMN +I VFGN G+I+ MEKWYEKF  +GIEP+ RTF ILI
Sbjct: 251  MEKVLSSMLLSTTCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRYFGIEPETRTFNILI 310

Query: 848  SSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1027
             +YG+  +YDKM+SVMEYM K   PWTT+TYN VI AF + G+ K ++  F+QM  +G+K
Sbjct: 311  GAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADAGDAKHMECTFDQMRAEGMK 370

Query: 1028 PDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTAQMEMV 1207
             D+ T C LIN YA A +FHK+   V+ A + +I  +  ++NA++ AC KA+D  +ME V
Sbjct: 371  ADTKTLCCLINGYANAGLFHKVISSVRLAGKLEIPENITFYNAVLSACAKAEDLMEMERV 430

Query: 1208 YREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
            ++ M+   C PD  T+ I+I AY  +G+++K+ ++E++ Q +
Sbjct: 431  FKRMKDSQCQPDDTTYTIMIEAYRKEGMNDKIYYLEQEKQTM 472


>ref|XP_002519315.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541630|gb|EEF43179.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  411 bits (1056), Expect = e-112
 Identities = 199/419 (47%), Positives = 286/419 (68%), Gaps = 4/419 (0%)
 Frame = +2

Query: 140  SPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 307
            +PI  +KK   +++ A     T+ E L   I  K W QAL++F+ML++QP Y P  GTY 
Sbjct: 75   TPIKNIKKKLDRKNKAKAWVNTVTEALSDRILKKQWFQALEVFEMLKEQPFYHPKEGTYM 134

Query: 308  QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQEMKSN 487
            +LL LLGR  QP+  H +F+ M E+G EP +E  TA+++AY R    D AFS+ Q+MK+ 
Sbjct: 135  KLLVLLGRTGQPQRAHQLFDEMVEEGIEPTAELYTALLAAYCRNHLTDEAFSILQQMKTL 194

Query: 488  PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 667
            P C PDV+TYS L++ C++AS+F+ V  L +EM    I PNTVT+NI++ GYGKAG + +
Sbjct: 195  PRCLPDVYTYSTLLKACVDASRFELVEALYQEMGERLITPNTVTQNIVLSGYGKAGMYDQ 254

Query: 668  MENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILI 847
            ME VL  ML S  C PDVWTMN ++ VFGN+G+I+ MEKWYEKF ++GIEP+ RTF ILI
Sbjct: 255  MERVLSGMLESTECKPDVWTMNIILSVFGNKGQIDLMEKWYEKFRSFGIEPETRTFNILI 314

Query: 848  SSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1027
             +YG+  +YDKM+SVME+M K   PWTT+TYN VI AF   G++K ++  F+QM  +G+K
Sbjct: 315  GAYGKKRMYDKMSSVMEFMRKLQFPWTTSTYNNVIEAFAVAGDVKHMEYTFDQMRAEGMK 374

Query: 1028 PDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTAQMEMV 1207
             D+ T C LIN YA A +FHK+   V+ A +F+I  +T ++NA+I AC KA+D  +ME V
Sbjct: 375  ADTKTFCCLINGYANAGLFHKVISSVQLATKFEIPENTTFYNAIISACAKAEDLMEMERV 434

Query: 1208 YREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQELSSVAI*VPSIFNSVTFG 1384
            ++ M+   C PDS T++I++ AY  +G+++KV ++E++ Q +  VA  +P +   V  G
Sbjct: 435  FKRMKDNQCQPDSTTYSIMVEAYKREGMNDKVYYLEQEKQGM--VAHVMPLLTEQVVSG 491


>ref|XP_006647081.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
            chloroplastic-like [Oryza brachyantha]
          Length = 498

 Score =  410 bits (1055), Expect = e-112
 Identities = 196/402 (48%), Positives = 274/402 (68%), Gaps = 4/402 (0%)
 Frame = +2

Query: 140  SPIVQVKKA----AIKRHTAMTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 307
            +PI  VKK     A  +  A T+ E L   I  KNWQ+AL++F+ML++QP Y P  GT+ 
Sbjct: 89   TPIKNVKKRLDARADAKAWACTVTEALADRIAAKNWQEALQVFEMLKEQPFYHPKEGTFM 148

Query: 308  QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQEMKSN 487
            +LL LLGR  QP    S+F  M   GC P  E  TA+I+AY R G LD+AF L  +MK++
Sbjct: 149  KLLLLLGRSGQPSRARSLFEEMLSQGCNPTPELYTALIAAYCRNGLLDDAFRLLDDMKAS 208

Query: 488  PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 667
            P CQPDV+TYS +I+ C++ S+F  V  L  EM+  GI PNTVT+NI++ GYG+AGR  +
Sbjct: 209  PLCQPDVYTYSTIIKACVDDSRFDMVDALYREMADRGIAPNTVTQNIVLSGYGRAGRLDD 268

Query: 668  MENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILI 847
            ME VL  ML S +  PDVWTMN ++ +FGNRG++E MEKWYEKF  YGIEP+ RT  ILI
Sbjct: 269  MEKVLSAMLESRTSKPDVWTMNIILSLFGNRGQVELMEKWYEKFRGYGIEPETRTLNILI 328

Query: 848  SSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1027
             +YG+  +YDKM++VMEYM K + PWTTAT+N VI AF  + + K ++  FNQM  +G+K
Sbjct: 329  GAYGKKRMYDKMSAVMEYMRKLAFPWTTATFNNVIEAFAESADAKNMEHTFNQMRAEGMK 388

Query: 1028 PDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTAQMEMV 1207
            PD+ T C LIN ++ A +FHK+  +VK AER D+  DT + NA++ AC KA D  +ME V
Sbjct: 389  PDTKTFCCLINGFSNAGLFHKVVGMVKLAERLDVPMDTSFHNAVLAACAKADDLMEMERV 448

Query: 1208 YREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
            +R M++  C PD+ T+++L+ AY  +G+++K+  ++++   L
Sbjct: 449  FRHMKQIQCVPDATTYSVLVEAYRKEGMTDKIYGLQQENPSL 490


>gb|EOY06895.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao]
          Length = 491

 Score =  410 bits (1054), Expect = e-112
 Identities = 197/406 (48%), Positives = 279/406 (68%), Gaps = 4/406 (0%)
 Frame = +2

Query: 125  GSVVSSPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPN 292
            GS   +P+  +KK   +++ A     T+ ETL   I  K W QAL++F+MLR QP YQP 
Sbjct: 77   GSSKKTPLKNLKKKLDRKNNAKAWVCTVTETLSDCILKKQWLQALQVFEMLRDQPFYQPK 136

Query: 293  IGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQ 472
             GTY +LL LLG+  QP     +F+ M ++GCEP  E  TA+++AY R   +D+AF+   
Sbjct: 137  EGTYMKLLVLLGKSGQPHRARQLFHDMVQEGCEPTPELFTALLAAYCRNNLIDDAFATLN 196

Query: 473  EMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKA 652
            +MK+ P CQPDVFTYS LI+ C++AS+F  V  L  EM    I PNTVT+NI++ GYGKA
Sbjct: 197  QMKTLPCCQPDVFTYSTLIKACVDASRFDLVESLYGEMEERLITPNTVTQNIVLSGYGKA 256

Query: 653  GRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRT 832
            G+F++ME VL  ML S +  PDVWTMN ++ VFGN+G+I+ ME+WYEKF  +GIEP+ RT
Sbjct: 257  GKFEQMEKVLSGMLESSASKPDVWTMNIILSVFGNKGQIDMMERWYEKFRNFGIEPETRT 316

Query: 833  FEILISSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMI 1012
            F ILI +YG+  +YDKM+SVMEYM K   PWTT+TYN VI AF + G+ K ++  F+QM 
Sbjct: 317  FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKHMEYTFDQMR 376

Query: 1013 LDGVKPDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTA 1192
             +G+K D+ T C LIN YA A +FHK+   V+ A + +I  +T ++NA+I AC KA+D  
Sbjct: 377  AEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKLEIPENTSFYNAVISACAKAEDLM 436

Query: 1193 QMEMVYREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQE 1330
            +ME V++ M+ K C P+S+TF+I++ AY  +G+++K+  +E+  QE
Sbjct: 437  EMERVFKRMKDKQCQPNSMTFSIMVEAYRKEGMNDKIYDLEQLKQE 482



 Score =  122 bits (306), Expect = 4e-25
 Identities = 78/294 (26%), Positives = 141/294 (47%)
 Frame = +2

Query: 242  ALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVI 421
            A      ++  P  QP++ TY  L+      ++ + V S++  M+E    P++     V+
Sbjct: 191  AFATLNQMKTLPCCQPDVFTYSTLIKACVDASRFDLVESLYGEMEERLITPNTVTQNIVL 250

Query: 422  SAYARKGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGI 601
            S Y + G  +    +   M  + + +PDV+T +I++       +   +    E+    GI
Sbjct: 251  SGYGKAGKFEQMEKVLSGMLESSASKPDVWTMNIILSVFGNKGQIDMMERWYEKFRNFGI 310

Query: 602  LPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETME 781
             P T T NILI  YGK   + +M +V+ E +          T NNVI  F + G+ + ME
Sbjct: 311  EPETRTFNILIGAYGKKRMYDKMSSVM-EYMRKLQFPWTTSTYNNVIEAFADVGDAKHME 369

Query: 782  KWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAF 961
              +++    G++ D +TF  LI+ Y  AGL+ K+ S ++   K  +P  T+ YN VI A 
Sbjct: 370  YTFDQMRAEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKLEIPENTSFYNAVISAC 429

Query: 962  KNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMFHKLKKVVKYAERF 1123
                ++ +++ VF +M     +P+S T   ++ AY +  M  K+  + +  + F
Sbjct: 430  AKAEDLMEMERVFKRMKDKQCQPNSMTFSIMVEAYRKEGMNDKIYDLEQLKQEF 483



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 4/211 (1%)
 Frame = +2

Query: 713  PDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASV 892
            P   T   ++ + G  G+     + +      G EP    F  L+++Y +  L D   + 
Sbjct: 135  PKEGTYMKLLVLLGKSGQPHRARQLFHDMVQEGCEPTPELFTALLAAYCRNNLIDDAFAT 194

Query: 893  MEYMHKTSLPWTTA---TYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINA 1063
            +  M   +LP       TY+ +I A  +      ++ ++ +M    + P++ T   +++ 
Sbjct: 195  LNQMK--TLPCCQPDVFTYSTLIKACVDASRFDLVESLYGEMEERLITPNTVTQNIVLSG 252

Query: 1064 YAEANMFHKLKKVVK-YAERFDIIPDTPYFNALIDACHKAQDTAQMEMVYREMQKKGCAP 1240
            Y +A  F +++KV+    E     PD    N ++           ME  Y + +  G  P
Sbjct: 253  YGKAGKFEQMEKVLSGMLESSASKPDVWTMNIILSVFGNKGQIDMMERWYEKFRNFGIEP 312

Query: 1241 DSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
            ++ TFNILI AY  K + +K+  V + M++L
Sbjct: 313  ETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 343


>ref|XP_002461350.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
            gi|241924727|gb|EER97871.1| hypothetical protein
            SORBIDRAFT_02g001400 [Sorghum bicolor]
          Length = 560

 Score =  410 bits (1054), Expect = e-112
 Identities = 189/392 (48%), Positives = 273/392 (69%), Gaps = 4/392 (1%)
 Frame = +2

Query: 140  SPIVQVKKA----AIKRHTAMTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 307
            +P+  VKK     A  +  A T+ E L   + +KNWQ+AL++F+ML++QP Y P  GT+ 
Sbjct: 151  TPLKNVKKRLDARAEAKAWACTVTEALADRVTSKNWQEALQVFEMLKEQPFYHPKEGTFM 210

Query: 308  QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQEMKSN 487
            +L+ LLGR  QP   H +F+ M + GC+P     TA+I AY R G LD+A  L  +MK +
Sbjct: 211  KLIVLLGRSGQPARAHQLFDEMLQQGCQPTPGLYTALIGAYCRSGLLDDALQLLNDMKGS 270

Query: 488  PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 667
            P CQPDV+TYS +I+ C++A++F  +  + ++M+   I PNTVT+NI++ GYGKAGR  +
Sbjct: 271  PLCQPDVYTYSTIIKACVDATRFDLIDVMYKDMAERSIAPNTVTQNIVLSGYGKAGRLDD 330

Query: 668  MENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILI 847
            ME VL +ML S +C PDVWTMN ++ +FGN+G++E MEKWYEKF +YGIEP+ RT  ILI
Sbjct: 331  MEKVLSDMLDSTACKPDVWTMNIILSLFGNKGQVELMEKWYEKFRSYGIEPETRTLNILI 390

Query: 848  SSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1027
             +YG+  +YDKM++VMEYM K + PWTTATYN VI AF   G+ K ++  FNQM  +G+K
Sbjct: 391  GAYGKKRMYDKMSAVMEYMRKLAFPWTTATYNNVIEAFAEAGDAKNMEHTFNQMRSEGMK 450

Query: 1028 PDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTAQMEMV 1207
            PD+ T C LIN +++A  FHK+  +VK AER D+  +T + NA++ AC +A D  +ME V
Sbjct: 451  PDTKTFCCLINGFSKAGQFHKVVGMVKLAERLDVPANTSFHNAILGACARADDLMEMERV 510

Query: 1208 YREMQKKGCAPDSVTFNILINAYSSKGISEKV 1303
            +R M+   C PD+VT++IL+ AY  +G+++K+
Sbjct: 511  FRHMKHTQCDPDAVTYSILVEAYRKEGMTDKI 542



 Score =  126 bits (316), Expect = 3e-26
 Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 1/294 (0%)
 Frame = +2

Query: 455  AFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILI 634
            A  +F+ +K  P   P   T+  LI     + +     +L +EM   G  P       LI
Sbjct: 189  ALQVFEMLKEQPFYHPKEGTFMKLIVLLGRSGQPARAHQLFDEMLQQGCQPTPGLYTALI 248

Query: 635  RGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGI 814
              Y ++G   +   +L +M  S  C PDV+T + +I+   +    + ++  Y+      I
Sbjct: 249  GAYCRSGLLDDALQLLNDMKGSPLCQPDVYTYSTIIKACVDATRFDLIDVMYKDMAERSI 308

Query: 815  EPDIRTFEILISSYGQAGLYDKMASVM-EYMHKTSLPWTTATYNVVIHAFKNTGEIKQID 991
             P+  T  I++S YG+AG  D M  V+ + +  T+      T N+++  F N G+++ ++
Sbjct: 309  APNTVTQNIVLSGYGKAGRLDDMEKVLSDMLDSTACKPDVWTMNIILSLFGNKGQVELME 368

Query: 992  PVFNQMILDGVKPDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDAC 1171
              + +    G++P++ T   LI AY +  M+ K+  V++Y  +      T  +N +I+A 
Sbjct: 369  KWYEKFRSYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATYNNVIEAF 428

Query: 1172 HKAQDTAQMEMVYREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
             +A D   ME  + +M+ +G  PD+ TF  LIN +S  G   KV  + K  + L
Sbjct: 429  AEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGFSKAGQFHKVVGMVKLAERL 482


>ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
            chloroplastic-like [Cucumis sativus]
            gi|449522692|ref|XP_004168360.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g06430,
            chloroplastic-like [Cucumis sativus]
          Length = 496

 Score =  409 bits (1051), Expect = e-111
 Identities = 193/402 (48%), Positives = 280/402 (69%), Gaps = 4/402 (0%)
 Frame = +2

Query: 140  SPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 307
            +P+ +VKK   +++ A     T+ E L  HI  K W QAL++F+MLR+QP Y+P  GTY 
Sbjct: 87   APLKRVKKKLDRKNNAKAWANTVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGTYM 146

Query: 308  QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQEMKSN 487
            +LL LLGR  QP     +F+TM ++ CEP  E  TA+++AY R   +D+AFS    MK+ 
Sbjct: 147  KLLVLLGRSGQPHRARLLFDTMVQERCEPTPELYTALLAAYCRNNLIDDAFSTLNLMKTL 206

Query: 488  PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 667
            P CQPDV+TYSILI+ C++ S+F+ V  L EEM+   I PNTVT+NI++ GYGK G++ +
Sbjct: 207  PRCQPDVYTYSILIKACVDDSRFEIVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQ 266

Query: 668  MENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILI 847
            ME VL+ ML S +C PDVWTMN ++ VFGN+G IE ME+WYEKF  +GIEP+ RTF ILI
Sbjct: 267  MEKVLIGMLESTTCRPDVWTMNIILSVFGNKGHIEMMERWYEKFRNFGIEPETRTFNILI 326

Query: 848  SSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1027
             +YG+  +YDKM+SVMEYM K   PWTT+TYN VI AF + G+ K ++  F QM  +G++
Sbjct: 327  GAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMR 386

Query: 1028 PDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTAQMEMV 1207
             D+ T C LIN YA A +FHK+   VK A + +I  +T ++NA+I AC KA+D  +M+ V
Sbjct: 387  ADTKTFCCLINGYANAGLFHKVIGSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMDRV 446

Query: 1208 YREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
            ++ M+ K C PD+ T++I++ AY  +G++++V ++E + +++
Sbjct: 447  FKRMKDKHCQPDNKTYSIMMEAYGKEGMNDRVHYLELEKKQV 488


>ref|NP_187294.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g06430, chloroplastic; AltName: Full=Protein EMBRYO
            DEFECTIVE 2750; Flags: Precursor
            gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein
            [Arabidopsis thaliana] gi|20466300|gb|AAM20467.1| unknown
            protein [Arabidopsis thaliana] gi|30387593|gb|AAP31962.1|
            At3g06430 [Arabidopsis thaliana]
            gi|332640870|gb|AEE74391.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 486

 Score =  408 bits (1048), Expect = e-111
 Identities = 199/402 (49%), Positives = 274/402 (68%), Gaps = 4/402 (0%)
 Frame = +2

Query: 140  SPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 307
            +PI  VKK   +R  A     T+ ETL   I  K W QAL++F MLR+Q  YQP  GTY 
Sbjct: 69   TPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYM 128

Query: 308  QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQEMKSN 487
            +LL LLG+  QP     +F+ M E+G EP  E  TA+++AY R   +D+AFS+  +MKS 
Sbjct: 129  KLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSF 188

Query: 488  PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 667
            P CQPDVFTYS L++ C++AS+F  V  L +EM    I PNTVT+NI++ GYG+ GRF +
Sbjct: 189  PQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQ 248

Query: 668  MENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILI 847
            ME VL +ML S +C PDVWTMN ++ VFGN G+I+ ME WYEKF  +GIEP+ RTF ILI
Sbjct: 249  MEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILI 308

Query: 848  SSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1027
             SYG+  +YDKM+SVMEYM K   PWTT+TYN +I AF + G+ K ++  F+QM  +G+K
Sbjct: 309  GSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMK 368

Query: 1028 PDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTAQMEMV 1207
             D+ T C LIN YA A +FHK+   V+ A +F+I  +T ++NA+I AC KA D  +ME V
Sbjct: 369  ADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERV 428

Query: 1208 YREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
            Y  M+++ C  DS TF I++ AY  +G+++K+ ++E++ Q+L
Sbjct: 429  YIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQERQKL 470


>gb|ACG30078.1| PPR2 [Zea mays]
          Length = 580

 Score =  408 bits (1048), Expect = e-111
 Identities = 189/392 (48%), Positives = 270/392 (68%), Gaps = 4/392 (1%)
 Frame = +2

Query: 140  SPIVQVKKA----AIKRHTAMTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 307
            +P+  VKK     A  +  A T+ E L   + +KNWQ+AL++F+ML++QP Y P  GTY 
Sbjct: 171  TPLKNVKKRLDARADAKAWACTVTEALADRVSSKNWQEALQVFEMLKEQPFYHPKEGTYM 230

Query: 308  QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQEMKSN 487
            +L+ LLGR  QP   H +F+ M + GC+P  E  TA+I AY R G LD A  L  +MKS+
Sbjct: 231  KLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALIGAYCRSGLLDEALQLLNDMKSS 290

Query: 488  PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 667
            P CQPDV+TYS +I+ C++A++F     + ++M+   I PNTVT+NI++ GYGKAGR  +
Sbjct: 291  PLCQPDVYTYSTIIKACVDAARFDLTDAMYKDMAERSISPNTVTQNIVLSGYGKAGRLDD 350

Query: 668  MENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILI 847
            ME VL +ML S SC PDVWTMN ++ +FGNRGE+E ME+WYEKF  YG+EP+ RT  ILI
Sbjct: 351  MERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILI 410

Query: 848  SSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1027
             +YG+  +YDKM++VME+M K + PWTTATYN VI AF   G+   ++  FNQM  +G++
Sbjct: 411  GAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMR 470

Query: 1028 PDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTAQMEMV 1207
            PD+ T C LI+ ++ A  FHK+  +VK AER D+  +TP+ NA++ AC +A D  +ME V
Sbjct: 471  PDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPANTPFHNAVLGACARADDLVEMERV 530

Query: 1208 YREMQKKGCAPDSVTFNILINAYSSKGISEKV 1303
            +R M+   C PD+ T++IL+ AY  +G+++K+
Sbjct: 531  FRRMKHTQCEPDASTYSILVEAYRKEGMTDKI 562



 Score =  126 bits (317), Expect = 2e-26
 Identities = 81/294 (27%), Positives = 140/294 (47%), Gaps = 1/294 (0%)
 Frame = +2

Query: 455  AFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILI 634
            A  +F+ +K  P   P   TY  LI     + +     +L +EM   G  P       LI
Sbjct: 209  ALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALI 268

Query: 635  RGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGI 814
              Y ++G   E   +L +M +S  C PDV+T + +I+   +    +  +  Y+      I
Sbjct: 269  GAYCRSGLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACVDAARFDLTDAMYKDMAERSI 328

Query: 815  EPDIRTFEILISSYGQAGLYDKMASVM-EYMHKTSLPWTTATYNVVIHAFKNTGEIKQID 991
             P+  T  I++S YG+AG  D M  V+ + +   S      T N+++  F N GE++ ++
Sbjct: 329  SPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVELME 388

Query: 992  PVFNQMILDGVKPDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDAC 1171
              + +    GV+P++ T   LI AY +  M+ K+  V+++  +      T  +N +I+A 
Sbjct: 389  RWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAF 448

Query: 1172 HKAQDTAQMEMVYREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
             +A D   ME  + +M+ +G  PD+ TF  LI+ +S  G   KV  + K  + L
Sbjct: 449  AEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERL 502


>ref|NP_001169349.1| pentatricopeptide repeat 2 [Zea mays] gi|30961817|gb|AAP37977.1| PPR2
            [Zea mays] gi|224028857|gb|ACN33504.1| unknown [Zea mays]
            gi|414883415|tpg|DAA59429.1| TPA: pentatricopeptide
            repeat 2 [Zea mays]
          Length = 571

 Score =  408 bits (1048), Expect = e-111
 Identities = 189/392 (48%), Positives = 270/392 (68%), Gaps = 4/392 (1%)
 Frame = +2

Query: 140  SPIVQVKKA----AIKRHTAMTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 307
            +P+  VKK     A  +  A T+ E L   + +KNWQ+AL++F+ML++QP Y P  GTY 
Sbjct: 162  TPLKNVKKRLDARADAKAWACTVTEALADRVSSKNWQEALQVFEMLKEQPFYHPKEGTYM 221

Query: 308  QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQEMKSN 487
            +L+ LLGR  QP   H +F+ M + GC+P  E  TA+I AY R G LD A  L  +MKS+
Sbjct: 222  KLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALIGAYCRSGLLDEALQLLNDMKSS 281

Query: 488  PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 667
            P CQPDV+TYS +I+ C++A++F     + ++M+   I PNTVT+NI++ GYGKAGR  +
Sbjct: 282  PLCQPDVYTYSTIIKACIDAARFDLTDAMYKDMAERSISPNTVTQNIVLSGYGKAGRLDD 341

Query: 668  MENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILI 847
            ME VL +ML S SC PDVWTMN ++ +FGNRGE+E ME+WYEKF  YG+EP+ RT  ILI
Sbjct: 342  MERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILI 401

Query: 848  SSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1027
             +YG+  +YDKM++VME+M K + PWTTATYN VI AF   G+   ++  FNQM  +G++
Sbjct: 402  GAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMR 461

Query: 1028 PDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTAQMEMV 1207
            PD+ T C LI+ ++ A  FHK+  +VK AER D+  +TP+ NA++ AC +A D  +ME V
Sbjct: 462  PDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPVNTPFHNAVLGACARADDLVEMERV 521

Query: 1208 YREMQKKGCAPDSVTFNILINAYSSKGISEKV 1303
            +R M+   C PD+ T++IL+ AY  +G+++K+
Sbjct: 522  FRRMKHTQCEPDASTYSILVEAYRKEGMTDKI 553



 Score =  126 bits (316), Expect = 3e-26
 Identities = 81/294 (27%), Positives = 140/294 (47%), Gaps = 1/294 (0%)
 Frame = +2

Query: 455  AFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILI 634
            A  +F+ +K  P   P   TY  LI     + +     +L +EM   G  P       LI
Sbjct: 200  ALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALI 259

Query: 635  RGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGI 814
              Y ++G   E   +L +M +S  C PDV+T + +I+   +    +  +  Y+      I
Sbjct: 260  GAYCRSGLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACIDAARFDLTDAMYKDMAERSI 319

Query: 815  EPDIRTFEILISSYGQAGLYDKMASVM-EYMHKTSLPWTTATYNVVIHAFKNTGEIKQID 991
             P+  T  I++S YG+AG  D M  V+ + +   S      T N+++  F N GE++ ++
Sbjct: 320  SPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVELME 379

Query: 992  PVFNQMILDGVKPDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDAC 1171
              + +    GV+P++ T   LI AY +  M+ K+  V+++  +      T  +N +I+A 
Sbjct: 380  RWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIEAF 439

Query: 1172 HKAQDTAQMEMVYREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
             +A D   ME  + +M+ +G  PD+ TF  LI+ +S  G   KV  + K  + L
Sbjct: 440  AEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERL 493


>ref|XP_006407947.1| hypothetical protein EUTSA_v10020626mg [Eutrema salsugineum]
            gi|557109093|gb|ESQ49400.1| hypothetical protein
            EUTSA_v10020626mg [Eutrema salsugineum]
          Length = 480

 Score =  407 bits (1046), Expect = e-111
 Identities = 198/400 (49%), Positives = 272/400 (68%), Gaps = 4/400 (1%)
 Frame = +2

Query: 140  SPIVQVKKAAIKRHTA----MTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 307
            +PI  VKK   +R  A     T+ ETL   I  K W QAL++F MLR+QP YQP  GTY 
Sbjct: 69   TPIKNVKKKLDRRSKANGWVCTVTETLSDLIAKKQWLQALEVFGMLREQPFYQPKEGTYM 128

Query: 308  QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQEMKSN 487
            +LL LLG+  QP     +F+ M E+G EP +E  TA+++AY R   +D AFS+   MKS 
Sbjct: 129  KLLVLLGKSGQPNRAQKLFDEMLEEGLEPTAELYTALLAAYTRNNLIDEAFSILDRMKSL 188

Query: 488  PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 667
            P CQPDVFTYS L++ C++AS F  V  L +EM    I PNTVT+NI++ G+G+ GRF +
Sbjct: 189  PRCQPDVFTYSTLLKACVDASLFDLVDSLYKEMDERLITPNTVTQNIVLSGFGRVGRFDQ 248

Query: 668  MENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILI 847
            ME VL +ML S SC PDVWTMN ++ VFGN G+I+ ME WYEKF  +GIEP+ R+F ILI
Sbjct: 249  MEKVLSDMLVSTSCKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRSFNILI 308

Query: 848  SSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1027
             +YG+  +YDKM+SVMEYM K   PWTT+TYN +I AF + G+ K ++  F+QM  +G+K
Sbjct: 309  GAYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMEYTFDQMRSEGMK 368

Query: 1028 PDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTAQMEMV 1207
             D+ T C LIN YA A +FHK+   V+ A +F+I  +T ++NA+I AC KA D  +ME V
Sbjct: 369  ADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTSFYNAVISACAKADDLIEMERV 428

Query: 1208 YREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQ 1327
            Y+ M+++ C  DS TF I+I AY  +G+++K+ ++E++ Q
Sbjct: 429  YKRMKERECVCDSRTFEIMIEAYGKEGMNDKIYYLEQERQ 468



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 47/211 (22%), Positives = 97/211 (45%), Gaps = 4/211 (1%)
 Frame = +2

Query: 713  PDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASV 892
            P   T   ++ + G  G+    +K +++    G+EP    +  L+++Y +  L D+  S+
Sbjct: 122  PKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTAELYTALLAAYTRNNLIDEAFSI 181

Query: 893  MEYMHKTSLPWTTA---TYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINA 1063
            ++ M   SLP       TY+ ++ A  +      +D ++ +M    + P++ T   +++ 
Sbjct: 182  LDRMK--SLPRCQPDVFTYSTLLKACVDASLFDLVDSLYKEMDERLITPNTVTQNIVLSG 239

Query: 1064 YAEANMFHKLKKVVK-YAERFDIIPDTPYFNALIDACHKAQDTAQMEMVYREMQKKGCAP 1240
            +     F +++KV+          PD    N ++           ME  Y + +  G  P
Sbjct: 240  FGRVGRFDQMEKVLSDMLVSTSCKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEP 299

Query: 1241 DSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
            ++ +FNILI AY  K + +K+  V + M++L
Sbjct: 300  ETRSFNILIGAYGKKRMYDKMSSVMEYMRKL 330


>ref|XP_002884579.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
            gi|297330419|gb|EFH60838.1| EMB2750 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 486

 Score =  407 bits (1045), Expect = e-111
 Identities = 199/407 (48%), Positives = 274/407 (67%), Gaps = 4/407 (0%)
 Frame = +2

Query: 140  SPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 307
            +PI  VKK   +R  A     T+ ETL   I  K W QAL++F MLR+Q  YQP  GTY 
Sbjct: 69   TPIKNVKKKLDRRSKANGWANTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYM 128

Query: 308  QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQEMKSN 487
            +LL LLG+  QP     +F+ M E+G EP  E  TA+++AY R   +D+AFS+   MK  
Sbjct: 129  KLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDTMKGL 188

Query: 488  PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 667
            P CQPDVFTYS L++ C++AS+F  V  L +EM    I PNTVT+NI++ GYG+ GRF +
Sbjct: 189  PQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQ 248

Query: 668  MENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILI 847
            ME VL +ML S +C PDVWTMN ++ VFGN G+I+ ME WYEKF  +GIEP+ RTF ILI
Sbjct: 249  MEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILI 308

Query: 848  SSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1027
             SYG+  +YDKM+SVMEYM K   PWTT+TYN +I AF + G+ K ++  F+QM  +G+K
Sbjct: 309  GSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMK 368

Query: 1028 PDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTAQMEMV 1207
             D+ T C LIN YA A +FHK+   V+ A +F+I  +T ++NA+I AC KA D  +ME V
Sbjct: 369  ADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVIAACAKADDLIEMERV 428

Query: 1208 YREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQELSSVAI 1348
            Y  M+++ C  DS TF I++ AY  +G+++K+ ++E++ Q+L   A+
Sbjct: 429  YTRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQERQKLMDRAV 475


>ref|XP_002316075.2| hypothetical protein POPTR_0010s16360g [Populus trichocarpa]
            gi|550329937|gb|EEF02246.2| hypothetical protein
            POPTR_0010s16360g [Populus trichocarpa]
          Length = 487

 Score =  406 bits (1044), Expect = e-110
 Identities = 185/381 (48%), Positives = 268/381 (70%)
 Frame = +2

Query: 191  TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYRQLLSLLGRYNQPEHVHSVFNT 370
            T+ E L   +  K W QA+++F+ML++QP YQP   TY +LL LLGR  QP+  H +F+ 
Sbjct: 100  TVAEALTDCVLKKQWLQAIQVFEMLKEQPFYQPKEATYMKLLVLLGRCGQPQRAHQLFDE 159

Query: 371  MKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEAS 550
            M E+G EP +E  TA+++AY R   +D  FS+  +MKS P CQPDV+TYS L++ C++AS
Sbjct: 160  MVEEGIEPTTELYTALLAAYCRNNLIDEGFSIINQMKSLPRCQPDVYTYSTLLKACVDAS 219

Query: 551  KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTM 730
            +F+ +  L +EM    I PNTVT+N+++ GYG+ G + +ME VL EML S +C PDVWTM
Sbjct: 220  RFELIDTLYQEMDERLISPNTVTQNVVLSGYGRVGMYDQMERVLSEMLESAACKPDVWTM 279

Query: 731  NNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHK 910
            N ++ VFGN G+I+ ME+WYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVMEYM K
Sbjct: 280  NIILSVFGNEGQIDLMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 339

Query: 911  TSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVKPDSATCCSLINAYAEANMFHK 1090
               PWTT+TYN VI AF + G+ K ++  F+QM  + +K D+ T C LIN YA A +FHK
Sbjct: 340  VQFPWTTSTYNNVIEAFADVGDAKNMEYAFDQMRAESMKADTKTFCCLINGYANAGLFHK 399

Query: 1091 LKKVVKYAERFDIIPDTPYFNALIDACHKAQDTAQMEMVYREMQKKGCAPDSVTFNILIN 1270
            +   V+ A +F+I  +T +FNA+I AC KA D  +ME V++ M+ K C PDS T++I++ 
Sbjct: 400  VISSVQLAAKFEIPENTSFFNAVISACAKADDLMEMERVFKRMKDKQCPPDSRTYSIMVE 459

Query: 1271 AYSSKGISEKVRHVEKQMQEL 1333
            AY  +G+++K+ ++E++ QE+
Sbjct: 460  AYRKEGMNDKIYYLEQEKQEM 480



 Score = 72.4 bits (176), Expect = 4e-10
 Identities = 67/312 (21%), Positives = 126/312 (40%), Gaps = 1/312 (0%)
 Frame = +2

Query: 413  AVISAYARKGYLDNAFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSA 592
            A+     +K +L  A  +F+ +K  P  QP   TY  L+       + +   +L +EM  
Sbjct: 104  ALTDCVLKKQWLQ-AIQVFEMLKEQPFYQPKEATYMKLLVLLGRCGQPQRAHQLFDEMVE 162

Query: 593  MGILPNTVTKNILIRGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIE 772
             GI P T     L+  Y +     E  +++ +M +   C PDV+                
Sbjct: 163  EGIEPTTELYTALLAAYCRNNLIDEGFSIINQMKSLPRCQPDVY---------------- 206

Query: 773  TMEKWYEKFETYGIEPDIRTFEILISSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVI 952
                               T+  L+ +   A  ++ + ++ + M +  +   T T NVV+
Sbjct: 207  -------------------TYSTLLKACVDASRFELIDTLYQEMDERLISPNTVTQNVVL 247

Query: 953  HAFKNTGEIKQIDPVFNQMILDGV-KPDSATCCSLINAYAEANMFHKLKKVVKYAERFDI 1129
              +   G   Q++ V ++M+     KPD  T   +++ +        +++  +    F I
Sbjct: 248  SGYGRVGMYDQMERVLSEMLESAACKPDVWTMNIILSVFGNEGQIDLMERWYEKFRNFGI 307

Query: 1130 IPDTPYFNALIDACHKAQDTAQMEMVYREMQKKGCAPDSVTFNILINAYSSKGISEKVRH 1309
             P+T  FN LI A  K +   +M  V   M+K      + T+N +I A++  G ++ + +
Sbjct: 308  EPETRTFNILIGAYGKKRMYDKMSSVMEYMRKVQFPWTTSTYNNVIEAFADVGDAKNMEY 367

Query: 1310 VEKQMQELSSVA 1345
               QM+  S  A
Sbjct: 368  AFDQMRAESMKA 379


>gb|EEC75100.1| hypothetical protein OsI_11265 [Oryza sativa Indica Group]
          Length = 588

 Score =  406 bits (1044), Expect = e-110
 Identities = 194/398 (48%), Positives = 276/398 (69%), Gaps = 4/398 (1%)
 Frame = +2

Query: 140  SPIVQVKKA----AIKRHTAMTLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 307
            SPI  VKK     A  +  A T+ E L   I  KNWQ+AL++F+ML++QP Y P  GT+ 
Sbjct: 92   SPIKNVKKRLDARAEAKAWACTVTEALADRIDAKNWQEALQVFQMLKEQPFYHPKEGTFM 151

Query: 308  QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQEMKSN 487
            +LL LLGR  QP     +F+ M + GC+P  E  TA+I+AY R G LD+AF L  +MK++
Sbjct: 152  KLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYTALIAAYCRNGLLDDAFRLLADMKAS 211

Query: 488  PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 667
            P CQPDV+TYS +I+ C++AS+F  V  + ++M+   I PNTVT+NI++ GYG+AGR  +
Sbjct: 212  PVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVLSGYGRAGRLDD 271

Query: 668  MENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILI 847
            ME VL  ML S +  PDVWTMN ++ +FGNRG+IE+MEKWYEKF  YGIEP+ RT  ILI
Sbjct: 272  MEKVLSAMLDSTTSKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTLNILI 331

Query: 848  SSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1027
             +YG+  +YDKM++VMEYM K + PWTTAT+N VI AF + G+ K ++  FNQM  +G+K
Sbjct: 332  GAYGKKRMYDKMSAVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEGMK 391

Query: 1028 PDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTAQMEMV 1207
            PD+ T C LIN +  A +FHK+  +VK AER  +  DT + NA++ AC KA+D  +ME V
Sbjct: 392  PDTKTFCCLINGFGNAGLFHKVVGMVKLAERLGVPMDTTFHNAVLMACVKAEDLMEMERV 451

Query: 1208 YREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQ 1321
            +  M++  C PD+ T++IL+ AY  +G+++K+  ++++
Sbjct: 452  FMRMKQIQCVPDATTYSILVGAYRKEGMTDKIYVLQQE 489



 Score =  129 bits (323), Expect = 4e-27
 Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
 Frame = +2

Query: 455  AFSLFQEMKSNPSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILI 634
            A  +FQ +K  P   P   T+  L+     + +      L +EM   G  P       LI
Sbjct: 130  ALQVFQMLKEQPFYHPKEGTFMKLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYTALI 189

Query: 635  RGYGKAGRFQEMENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGI 814
              Y + G   +   +L +M  S  C PDV+T + +I+   +    + ++  Y+      I
Sbjct: 190  AAYCRNGLLDDAFRLLADMKASPVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMADRSI 249

Query: 815  EPDIRTFEILISSYGQAGLYDKMASVMEYM--HKTSLPWTTATYNVVIHAFKNTGEIKQI 988
             P+  T  I++S YG+AG  D M  V+  M    TS P    T N+++  F N G+I+ +
Sbjct: 250  APNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKP-DVWTMNIILSLFGNRGQIESM 308

Query: 989  DPVFNQMILDGVKPDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDA 1168
            +  + +    G++P++ T   LI AY +  M+ K+  V++Y  +      T  FN +I+A
Sbjct: 309  EKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATFNNVIEA 368

Query: 1169 CHKAQDTAQMEMVYREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
               A D   ME  + +M+ +G  PD+ TF  LIN + + G+  KV  + K  + L
Sbjct: 369  FADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKLAERL 423


>ref|XP_006600379.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
            chloroplastic-like [Glycine max]
          Length = 488

 Score =  405 bits (1040), Expect = e-110
 Identities = 195/402 (48%), Positives = 271/402 (67%), Gaps = 4/402 (0%)
 Frame = +2

Query: 140  SPIVQVKKAAIKRHTAM----TLEETLIHHIYTKNWQQALKLFKMLRQQPQYQPNIGTYR 307
            +P+  +KK   K++ A     T+ E+L   I+ K+W QAL++F MLR+Q  YQP  GT  
Sbjct: 71   TPLKNLKKKFDKKNDAKAWVNTVTESLSERIHNKHWLQALQVFDMLREQTFYQPKEGTCM 130

Query: 308  QLLSLLGRYNQPEHVHSVFNTMKEDGCEPDSEFCTAVISAYARKGYLDNAFSLFQEMKSN 487
            +L+ LLG+  QP   H +F TM E+G EP  E  TA+++AY R   +D AFS+  EMK  
Sbjct: 131  KLIVLLGKSGQPHRAHQLFTTMIEEGLEPTPELYTALLAAYCRSNMIDEAFSVLNEMKKL 190

Query: 488  PSCQPDVFTYSILIQHCLEASKFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQE 667
            P CQPDVFTYS LI+ C++A KF  V  L EEM+   I PNTVT+NI++ GYGKAG F +
Sbjct: 191  PLCQPDVFTYSTLIKVCVDAFKFDLVQLLYEEMAERSITPNTVTQNIVLGGYGKAGMFDQ 250

Query: 668  MENVLLEMLTSESCIPDVWTMNNVIRVFGNRGEIETMEKWYEKFETYGIEPDIRTFEILI 847
            ME VL  ML S +C PDVWTMN +I VFGN G+I+  EKWYEKF  +GIEP+ RTF ILI
Sbjct: 251  MEKVLSSMLQSTTCKPDVWTMNTIISVFGNMGQIDMTEKWYEKFRYFGIEPETRTFNILI 310

Query: 848  SSYGQAGLYDKMASVMEYMHKTSLPWTTATYNVVIHAFKNTGEIKQIDPVFNQMILDGVK 1027
             +YG+  +YDKM+SVMEYM K   PWTT+TYN VI AF + G+ K ++  F+QM  +G+K
Sbjct: 311  GAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADAGDAKHMECTFDQMRAEGMK 370

Query: 1028 PDSATCCSLINAYAEANMFHKLKKVVKYAERFDIIPDTPYFNALIDACHKAQDTAQMEMV 1207
             D+ T C LIN YA A +FHK+   V+ A + +I  +  ++NA++ AC KA+D  +ME V
Sbjct: 371  ADTKTLCCLINGYANAGLFHKVISSVRLAGKLEIPENITFYNAVLSACAKAEDLMEMERV 430

Query: 1208 YREMQKKGCAPDSVTFNILINAYSSKGISEKVRHVEKQMQEL 1333
            ++ M+   C PD  T+ I+I AY  +G+++K+ ++E++ Q +
Sbjct: 431  FKRMKDSQCQPDDTTYTIMIEAYRKEGMNDKIYYLEQEKQTM 472