BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00009990
         (463 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006852751.1| hypothetical protein AMTR_s00033p00116200 [A...   106   3e-21
ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g...   100   2e-19
emb|CBI31941.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_004489406.1| PREDICTED: KH domain-containing protein At4g...    99   4e-19
gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays] g...    98   1e-18
gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]         98   1e-18
ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Sela...    98   1e-18
ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selag...    98   1e-18
gb|EXB31947.1| KH domain-containing protein [Morus notabilis]          97   2e-18
ref|XP_006338439.1| PREDICTED: KH domain-containing protein At4g...    97   2e-18
ref|XP_006338437.1| PREDICTED: KH domain-containing protein At4g...    97   2e-18
emb|CBI19333.3| unnamed protein product [Vitis vinifera]               97   2e-18
ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g...    97   2e-18
emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]    97   2e-18
gb|EOY15605.1| RNA-binding KH domain-containing protein, putativ...    97   3e-18
gb|EOY15604.1| RNA-binding KH domain-containing protein, putativ...    97   3e-18
gb|EOY15603.1| RNA-binding KH domain-containing protein, putativ...    97   3e-18
gb|EOY15601.1| RNA-binding KH domain-containing protein, putativ...    97   3e-18
ref|XP_002533123.1| Poly(rC)-binding protein, putative [Ricinus ...    96   4e-18
ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g...    96   5e-18

>ref|XP_006852751.1| hypothetical protein AMTR_s00033p00116200 [Amborella trichopoda]
           gi|548856365|gb|ERN14218.1| hypothetical protein
           AMTR_s00033p00116200 [Amborella trichopoda]
          Length = 696

 Score =  106 bits (265), Expect = 3e-21
 Identities = 49/103 (47%), Positives = 76/103 (73%)
 Frame = -3

Query: 458 NKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQI 279
           +K+  ++ R LVP+ QVGC+LGK G +I++I  E+  QIRIL  +K+P CA +S+EV+QI
Sbjct: 172 SKSSPIVFRFLVPSVQVGCILGKGGNVIKQISAESGAQIRILHNDKLPACAWSSEEVVQI 231

Query: 278 TGKDMPALKKAVMAITDRLVKNPPRERDLLAPNRPNQPPSLPH 150
           TG  + +++KA+ A++ +L +NPPR+RD   PN+P+ PP  PH
Sbjct: 232 TG-GLDSVRKALQAVSQQLQENPPRDRDPFPPNKPSGPP--PH 271



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/98 (38%), Positives = 68/98 (69%)
 Frame = -3

Query: 458 NKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQI 279
           +K  +++ ++LV ++Q+GC+LGK G II E+R  +   IRIL+K+++P CA  ++EV+Q+
Sbjct: 413 SKEKNLVCKVLVHSNQIGCLLGKGGAIIAEMRKSSRAHIRILAKDQIPKCASDNEEVVQV 472

Query: 278 TGKDMPALKKAVMAITDRLVKNPPRERDLLAPNRPNQP 165
           TG +  A+++A++ IT RL ++  R+R     N P+ P
Sbjct: 473 TG-EFEAVQEALLQITSRLRQHLFRDRFQSIINHPHHP 509


>ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 517

 Score =  100 bits (249), Expect = 2e-19
 Identities = 48/97 (49%), Positives = 68/97 (70%)
 Frame = -3

Query: 461 PNKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQ 282
           P +   V +R+LVP+ Q+GCV+GK G++IQ IR+ET  QIRIL  E +PPCAL+SDE++Q
Sbjct: 134 PEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEHLPPCALSSDELLQ 193

Query: 281 ITGKDMPALKKAVMAITDRLVKNPPRERDLLAPNRPN 171
           I G D   ++KA+  +  RL +NP R + LL  + PN
Sbjct: 194 IIG-DASVVRKALHQLASRLHENPSRSQHLLLSSSPN 229



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 42/98 (42%), Positives = 60/98 (61%)
 Frame = -3

Query: 443 VLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDM 264
           V  RLLVP+S++GC++GK G II E+R+ T   IRILSKE +P  A   DE++QITG ++
Sbjct: 339 VTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQITG-EL 397

Query: 263 PALKKAVMAITDRLVKNPPRERDLLAPNRPNQPPSLPH 150
                A++ +T RL  N       +A      PP+LP+
Sbjct: 398 NVASNALLQVTLRLKANLFEREGAIAA----IPPTLPY 431


>emb|CBI31941.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  100 bits (249), Expect = 2e-19
 Identities = 48/97 (49%), Positives = 68/97 (70%)
 Frame = -3

Query: 461 PNKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQ 282
           P +   V +R+LVP+ Q+GCV+GK G++IQ IR+ET  QIRIL  E +PPCAL+SDE++Q
Sbjct: 200 PEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEHLPPCALSSDELLQ 259

Query: 281 ITGKDMPALKKAVMAITDRLVKNPPRERDLLAPNRPN 171
           I G D   ++KA+  +  RL +NP R + LL  + PN
Sbjct: 260 IIG-DASVVRKALHQLASRLHENPSRSQHLLLSSSPN 295



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 42/98 (42%), Positives = 60/98 (61%)
 Frame = -3

Query: 443 VLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDM 264
           V  RLLVP+S++GC++GK G II E+R+ T   IRILSKE +P  A   DE++QITG ++
Sbjct: 405 VTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQITG-EL 463

Query: 263 PALKKAVMAITDRLVKNPPRERDLLAPNRPNQPPSLPH 150
                A++ +T RL  N       +A      PP+LP+
Sbjct: 464 NVASNALLQVTLRLKANLFEREGAIAA----IPPTLPY 497


>ref|XP_004489406.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
           [Cicer arietinum] gi|502090992|ref|XP_004489407.1|
           PREDICTED: KH domain-containing protein At4g18375-like
           isoform X2 [Cicer arietinum]
           gi|502090995|ref|XP_004489408.1| PREDICTED: KH
           domain-containing protein At4g18375-like isoform X3
           [Cicer arietinum]
          Length = 548

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 54/96 (56%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
 Frame = -3

Query: 443 VLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDM 264
           V  +LLVP+ Q+GCVLGK G+I+Q IR ET  QIRIL  E VPPCAL+SDE++QI+G D 
Sbjct: 139 VTAKLLVPSDQIGCVLGKGGQIVQSIRNETGAQIRILKDEHVPPCALSSDELVQISG-DA 197

Query: 263 PALKKAVMAITDRLVKNPPRERDLLAPNRPN-QPPS 159
             +KKA+  I  RL  NP R + LLA   P   PPS
Sbjct: 198 AVVKKALHQIASRLHLNPSRTQHLLASAVPGVYPPS 233



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
 Frame = -3

Query: 446 SVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKD 267
           S   RLLV +S++GC++GK G II E+R  T + IRILSKE +P  A   DE++QI+G D
Sbjct: 367 SFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASEDDEMVQISG-D 425

Query: 266 MPALKKAVMAITDRLVKNP-PRERDLLA---PNRPNQPPSLPHQE--NYQSRKS 123
           +   K A++ +  RL  N   RE   ++   P  P  PPS    +  +Y SR S
Sbjct: 426 LDVAKDALVHVLTRLRANLFDREGAAMSGFLPVLPYLPPSADVSDGLSYDSRDS 479


>gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
           gi|413955312|gb|AFW87961.1| hypothetical protein
           ZEAMMB73_110576 [Zea mays]
          Length = 543

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 48/98 (48%), Positives = 68/98 (69%)
 Frame = -3

Query: 443 VLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDM 264
           V +RLLVP+ Q+GC+LGK G IIQ IR+ET  QIR+LSK+ +P CA++ DE++QI+G DM
Sbjct: 136 VTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKDHIPACAISGDELLQISG-DM 194

Query: 263 PALKKAVMAITDRLVKNPPRERDLLAPNRPNQPPSLPH 150
             +KKA+  ++ RL  NP + + LLA +     P   H
Sbjct: 195 VVVKKALCQVSSRLHNNPSKSQHLLASSLTQPYPGGTH 232



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/78 (46%), Positives = 49/78 (62%)
 Frame = -3

Query: 446 SVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKD 267
           S   RLLV TS++GC++GK G II EIR  +   IRILSKE VP  A   +E++QI+G  
Sbjct: 364 SYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISG-G 422

Query: 266 MPALKKAVMAITDRLVKN 213
           +   + A++ I  RL  N
Sbjct: 423 LDVARHALVQIATRLKAN 440


>gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
          Length = 528

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 48/98 (48%), Positives = 68/98 (69%)
 Frame = -3

Query: 443 VLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDM 264
           V +RLLVP+ Q+GC+LGK G IIQ IR+ET  QIR+LSK+ +P CA++ DE++QI+G DM
Sbjct: 136 VTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKDHIPACAISGDELLQISG-DM 194

Query: 263 PALKKAVMAITDRLVKNPPRERDLLAPNRPNQPPSLPH 150
             +KKA+  ++ RL  NP + + LLA +     P   H
Sbjct: 195 VVVKKALCQVSSRLHNNPSKSQHLLASSLTQPYPGGTH 232



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/78 (46%), Positives = 49/78 (62%)
 Frame = -3

Query: 446 SVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKD 267
           S   RLLV TS++GC++GK G II EIR  +   IRILSKE VP  A   +E++QI+G  
Sbjct: 364 SYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISG-G 422

Query: 266 MPALKKAVMAITDRLVKN 213
           +   + A++ I  RL  N
Sbjct: 423 LDVARHALVQIATRLKAN 440


>ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
           gi|300148549|gb|EFJ15208.1| hypothetical protein
           SELMODRAFT_445677 [Selaginella moellendorffii]
          Length = 668

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 45/82 (54%), Positives = 68/82 (82%)
 Frame = -3

Query: 443 VLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDM 264
           V+ R+LVP +QVGC+LGK G+II+++R ET +QIRIL +E++P CAL +DEV+Q+ G D 
Sbjct: 189 VVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEVVQVVG-DR 247

Query: 263 PALKKAVMAITDRLVKNPPRER 198
           P++K+A+ AI+ RL+ NPP++R
Sbjct: 248 PSVKRALNAISTRLLDNPPKDR 269



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 39/82 (47%), Positives = 57/82 (69%)
 Frame = -3

Query: 443 VLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDM 264
           V+ RLLVP++ VGC+LGK G II E+R  T   IR+L +E++P CAL +DEV+Q+ G ++
Sbjct: 428 VVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPLCALDNDEVVQVLG-EI 486

Query: 263 PALKKAVMAITDRLVKNPPRER 198
              + A++ IT RL  N  RE+
Sbjct: 487 RVARDALVQITSRLRANLYREK 508


>ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
           gi|300143144|gb|EFJ09837.1| hypothetical protein
           SELMODRAFT_10869 [Selaginella moellendorffii]
          Length = 630

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 45/82 (54%), Positives = 68/82 (82%)
 Frame = -3

Query: 443 VLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDM 264
           V+ R+LVP +QVGC+LGK G+II+++R ET +QIRIL +E++P CAL +DEV+Q+ G D 
Sbjct: 129 VVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEVVQVVG-DR 187

Query: 263 PALKKAVMAITDRLVKNPPRER 198
           P++K+A+ AI+ RL+ NPP++R
Sbjct: 188 PSVKRALNAISTRLLDNPPKDR 209



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 39/82 (47%), Positives = 57/82 (69%)
 Frame = -3

Query: 443 VLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDM 264
           V+ RLLVP++ VGC+LGK G II E+R  T   IR+L +E++P CAL +DEV+Q+ G ++
Sbjct: 368 VVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPLCALDNDEVVQVLG-EI 426

Query: 263 PALKKAVMAITDRLVKNPPRER 198
              + A++ IT RL  N  RE+
Sbjct: 427 RVARDALVQITSRLRANLYREK 448


>gb|EXB31947.1| KH domain-containing protein [Morus notabilis]
          Length = 667

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 49/95 (51%), Positives = 65/95 (68%)
 Frame = -3

Query: 443 VLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDM 264
           V  RLLVP+ Q+GC++GK G+I+Q IR++T  QIRIL  E +P CAL SDE++QI+G D 
Sbjct: 139 VTARLLVPSDQIGCIIGKGGQIVQNIRSDTGAQIRILKDEHLPSCALNSDELVQISG-DA 197

Query: 263 PALKKAVMAITDRLVKNPPRERDLLAPNRPNQPPS 159
           P +KKA+  I  RL  NP R + LL    P+  PS
Sbjct: 198 PVVKKALYQIASRLHDNPSRSQHLLTSAAPSVYPS 232



 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 50/113 (44%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
 Frame = -3

Query: 446 SVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKD 267
           S   RLLVPTS++GC++GK G I+ E+R  T   IRIL+KE +P  A   DE++QI G D
Sbjct: 367 SFTTRLLVPTSRIGCLIGKGGAIVTEMRRATKANIRILAKENLPKIASEDDEMVQIAG-D 425

Query: 266 MPALKKAVMAITDRLVKNP-PRERDL--LAPNRPNQPPSL--PHQENYQSRKS 123
           +   K A++ +  RL  N   RE  L  L P  P  P S   P   NY+SR S
Sbjct: 426 LDVAKDALIHVVTRLRANIFDREGALPTLLPVLPYLPVSADGPDGLNYESRDS 478


>ref|XP_006338439.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X3
           [Solanum tuberosum]
          Length = 541

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 49/91 (53%), Positives = 66/91 (72%)
 Frame = -3

Query: 443 VLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDM 264
           V IRLLVP+ Q+GCV+GK G+I+Q IR+E+  QIRIL    +P CAL+SDE++QI+G + 
Sbjct: 138 VTIRLLVPSDQIGCVIGKGGQIVQNIRSESGAQIRILKDNHLPACALSSDELLQISG-EA 196

Query: 263 PALKKAVMAITDRLVKNPPRERDLLAPNRPN 171
             +KKA+  I  RL KNP R ++LLA   PN
Sbjct: 197 TVVKKALYEIATRLHKNPSRSQNLLASAAPN 227



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 37/74 (50%), Positives = 52/74 (70%)
 Frame = -3

Query: 434 RLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDMPAL 255
           RLLVPTS++GC++GK G II E+R  T   IRILSKE +P  A   DE++QI+G ++  +
Sbjct: 369 RLLVPTSRIGCLIGKGGTIINEMRKITKANIRILSKEGLPKVAAEDDEMVQISG-ELDVV 427

Query: 254 KKAVMAITDRLVKN 213
           K A++ +T RL  N
Sbjct: 428 KDALIQVTSRLRAN 441


>ref|XP_006338437.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
           [Solanum tuberosum] gi|565342614|ref|XP_006338438.1|
           PREDICTED: KH domain-containing protein At4g18375-like
           isoform X2 [Solanum tuberosum]
          Length = 542

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 49/91 (53%), Positives = 66/91 (72%)
 Frame = -3

Query: 443 VLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDM 264
           V IRLLVP+ Q+GCV+GK G+I+Q IR+E+  QIRIL    +P CAL+SDE++QI+G + 
Sbjct: 138 VTIRLLVPSDQIGCVIGKGGQIVQNIRSESGAQIRILKDNHLPACALSSDELLQISG-EA 196

Query: 263 PALKKAVMAITDRLVKNPPRERDLLAPNRPN 171
             +KKA+  I  RL KNP R ++LLA   PN
Sbjct: 197 TVVKKALYEIATRLHKNPSRSQNLLASAAPN 227



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 37/74 (50%), Positives = 52/74 (70%)
 Frame = -3

Query: 434 RLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDMPAL 255
           RLLVPTS++GC++GK G II E+R  T   IRILSKE +P  A   DE++QI+G ++  +
Sbjct: 369 RLLVPTSRIGCLIGKGGTIINEMRKITKANIRILSKEGLPKVAAEDDEMVQISG-ELDVV 427

Query: 254 KKAVMAITDRLVKN 213
           K A++ +T RL  N
Sbjct: 428 KDALIQVTSRLRAN 441


>emb|CBI19333.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 55/142 (38%), Positives = 84/142 (59%), Gaps = 5/142 (3%)
 Frame = -3

Query: 458 NKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQI 279
           NK+ + ++RLLV +SQVGC+LGK G +I+++  E+  QIRIL ++K+P CA  SDE++QI
Sbjct: 148 NKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQI 207

Query: 278 TGKDMPALKKAVMAITDRLVKNPPRERDLLAPNRPNQP-----PSLPHQENYQSRKSSSL 114
           TG ++ A K+A+ +I+ +L++NPPR+ D+++ N          P LP  E       S  
Sbjct: 208 TG-ELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPRSEAQPPPNYSFP 266

Query: 113 VQXXXXXXXXXXXXPDYHSKPP 48
            Q             DYHS  P
Sbjct: 267 AQ--GAPYAAGVRDTDYHSNTP 286



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 41/98 (41%), Positives = 65/98 (66%)
 Frame = -3

Query: 458 NKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQI 279
           +K  +V+ RLLV ++Q+GC+LGK G II E+R  +   IRIL K+++P CA  ++EV+QI
Sbjct: 386 SKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQI 445

Query: 278 TGKDMPALKKAVMAITDRLVKNPPRERDLLAPNRPNQP 165
            G +  A+++A++ IT RL  +    RD  + N P+ P
Sbjct: 446 NG-EFEAVQEALLQITTRLRHH--HFRDAFSVNHPSNP 480


>ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 701

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 55/142 (38%), Positives = 84/142 (59%), Gaps = 5/142 (3%)
 Frame = -3

Query: 458 NKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQI 279
           NK+ + ++RLLV +SQVGC+LGK G +I+++  E+  QIRIL ++K+P CA  SDE++QI
Sbjct: 177 NKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQI 236

Query: 278 TGKDMPALKKAVMAITDRLVKNPPRERDLLAPNRPNQP-----PSLPHQENYQSRKSSSL 114
           TG ++ A K+A+ +I+ +L++NPPR+ D+++ N          P LP  E       S  
Sbjct: 237 TG-ELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPRSEAQPPPNYSFP 295

Query: 113 VQXXXXXXXXXXXXPDYHSKPP 48
            Q             DYHS  P
Sbjct: 296 AQ--GAPYAAGVRDTDYHSNTP 315



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 41/98 (41%), Positives = 65/98 (66%)
 Frame = -3

Query: 458 NKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQI 279
           +K  +V+ RLLV ++Q+GC+LGK G II E+R  +   IRIL K+++P CA  ++EV+QI
Sbjct: 415 SKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQI 474

Query: 278 TGKDMPALKKAVMAITDRLVKNPPRERDLLAPNRPNQP 165
            G +  A+++A++ IT RL  +    RD  + N P+ P
Sbjct: 475 NG-EFEAVQEALLQITTRLRHH--HFRDAFSVNHPSNP 509


>emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
          Length = 709

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 55/142 (38%), Positives = 84/142 (59%), Gaps = 5/142 (3%)
 Frame = -3

Query: 458 NKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQI 279
           NK+ + ++RLLV +SQVGC+LGK G +I+++  E+  QIRIL ++K+P CA  SDE++QI
Sbjct: 177 NKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQI 236

Query: 278 TGKDMPALKKAVMAITDRLVKNPPRERDLLAPNRPNQP-----PSLPHQENYQSRKSSSL 114
           TG ++ A K+A+ +I+ +L++NPPR+ D+++ N          P LP  E       S  
Sbjct: 237 TG-ELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPRSEAQPPPNYSFP 295

Query: 113 VQXXXXXXXXXXXXPDYHSKPP 48
            Q             DYHS  P
Sbjct: 296 AQ--GAPYAAGVRDTDYHSNTP 315



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 41/98 (41%), Positives = 65/98 (66%)
 Frame = -3

Query: 458 NKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQI 279
           +K  +V+ RLLV ++Q+GC+LGK G II E+R  +   IRIL K+++P CA  ++EV+QI
Sbjct: 415 SKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQI 474

Query: 278 TGKDMPALKKAVMAITDRLVKNPPRERDLLAPNRPNQP 165
            G +  A+++A++ IT RL  +    RD  + N P+ P
Sbjct: 475 NG-EFEAVQEALLQITTRLRHH--HFRDAFSVNHPSNP 509


>gb|EOY15605.1| RNA-binding KH domain-containing protein, putative isoform 5
           [Theobroma cacao]
          Length = 572

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 43/87 (49%), Positives = 71/87 (81%)
 Frame = -3

Query: 455 KTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQIT 276
           K+ ++++RLLV +SQVGC+ GK G +I+++  E+  QIRIL ++K+PPCA ASDE++QIT
Sbjct: 175 KSFTMVLRLLVLSSQVGCLFGKGGSVIKQMSAESGAQIRILPRDKLPPCATASDELVQIT 234

Query: 275 GKDMPALKKAVMAITDRLVKNPPRERD 195
           G ++ A++KA+ +I+ +L++NPPR+ D
Sbjct: 235 G-EVAAVRKALQSISQQLIENPPRDHD 260



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
 Frame = -3

Query: 458 NKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQI 279
           +K  S++ RLLV ++Q+GC+LGK G II E+R  +   IRIL K++VP CA   +EV+QI
Sbjct: 403 SKDKSLMARLLVSSNQIGCLLGKGGAIIAEMRKSSGAHIRILGKDQVPKCASEGEEVVQI 462

Query: 278 TGKDMPALKKAVMAITDRLVKNPPRERDLLAPNRPNQPPSL---PHQENYQSRKSSSLVQ 108
            G +   + +A++ IT RL  +  R+    + N P+ P  L   P   ++  R+  S   
Sbjct: 463 NG-EHDTVCEALLQITTRLRHHFFRDA-FPSINHPSNPAFLDQGPPFPSFMGRREFS--- 517

Query: 107 XXXXXXXXXXXXPDYHSKPPHSGPHMREPP 18
                         +   PPH G H  + P
Sbjct: 518 --PPGLGPFHHFDAFGGPPPHGGFHPHDDP 545


>gb|EOY15604.1| RNA-binding KH domain-containing protein, putative isoform 4
           [Theobroma cacao]
          Length = 590

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 43/87 (49%), Positives = 71/87 (81%)
 Frame = -3

Query: 455 KTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQIT 276
           K+ ++++RLLV +SQVGC+ GK G +I+++  E+  QIRIL ++K+PPCA ASDE++QIT
Sbjct: 175 KSFTMVLRLLVLSSQVGCLFGKGGSVIKQMSAESGAQIRILPRDKLPPCATASDELVQIT 234

Query: 275 GKDMPALKKAVMAITDRLVKNPPRERD 195
           G ++ A++KA+ +I+ +L++NPPR+ D
Sbjct: 235 G-EVAAVRKALQSISQQLIENPPRDHD 260



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
 Frame = -3

Query: 458 NKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQI 279
           +K  S++ RLLV ++Q+GC+LGK G II E+R  +   IRIL K++VP CA   +EV+QI
Sbjct: 403 SKDKSLMARLLVSSNQIGCLLGKGGAIIAEMRKSSGAHIRILGKDQVPKCASEGEEVVQI 462

Query: 278 TGKDMPALKKAVMAITDRLVKNPPRERDLLAPNRPNQPPSL---PHQENYQSRKSSSLVQ 108
            G +   + +A++ IT RL  +  R+    + N P+ P  L   P   ++  R+  S   
Sbjct: 463 NG-EHDTVCEALLQITTRLRHHFFRDA-FPSINHPSNPAFLDQGPPFPSFMGRREFS--- 517

Query: 107 XXXXXXXXXXXXPDYHSKPPHSGPHMREPP 18
                         +   PPH G H  + P
Sbjct: 518 --PPGLGPFHHFDAFGGPPPHGGFHPHDDP 545


>gb|EOY15603.1| RNA-binding KH domain-containing protein, putative isoform 3
           [Theobroma cacao]
          Length = 662

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 43/87 (49%), Positives = 71/87 (81%)
 Frame = -3

Query: 455 KTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQIT 276
           K+ ++++RLLV +SQVGC+ GK G +I+++  E+  QIRIL ++K+PPCA ASDE++QIT
Sbjct: 175 KSFTMVLRLLVLSSQVGCLFGKGGSVIKQMSAESGAQIRILPRDKLPPCATASDELVQIT 234

Query: 275 GKDMPALKKAVMAITDRLVKNPPRERD 195
           G ++ A++KA+ +I+ +L++NPPR+ D
Sbjct: 235 G-EVAAVRKALQSISQQLIENPPRDHD 260



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
 Frame = -3

Query: 458 NKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQI 279
           +K  S++ RLLV ++Q+GC+LGK G II E+R  +   IRIL K++VP CA   +EV+QI
Sbjct: 403 SKDKSLMARLLVSSNQIGCLLGKGGAIIAEMRKSSGAHIRILGKDQVPKCASEGEEVVQI 462

Query: 278 TGKDMPALKKAVMAITDRLVKNPPRERDLLAPNRPNQPPSL---PHQENYQSRKSSSLVQ 108
            G +   + +A++ IT RL  +  R+    + N P+ P  L   P   ++  R+  S   
Sbjct: 463 NG-EHDTVCEALLQITTRLRHHFFRDA-FPSINHPSNPAFLDQGPPFPSFMGRREFS--- 517

Query: 107 XXXXXXXXXXXXPDYHSKPPHSGPHMREPP 18
                         +   PPH G H  + P
Sbjct: 518 --PPGLGPFHHFDAFGGPPPHGGFHPHDDP 545


>gb|EOY15601.1| RNA-binding KH domain-containing protein, putative isoform 1
           [Theobroma cacao] gi|508723705|gb|EOY15602.1|
           RNA-binding KH domain-containing protein, putative
           isoform 1 [Theobroma cacao]
          Length = 674

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 43/87 (49%), Positives = 71/87 (81%)
 Frame = -3

Query: 455 KTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQIT 276
           K+ ++++RLLV +SQVGC+ GK G +I+++  E+  QIRIL ++K+PPCA ASDE++QIT
Sbjct: 175 KSFTMVLRLLVLSSQVGCLFGKGGSVIKQMSAESGAQIRILPRDKLPPCATASDELVQIT 234

Query: 275 GKDMPALKKAVMAITDRLVKNPPRERD 195
           G ++ A++KA+ +I+ +L++NPPR+ D
Sbjct: 235 G-EVAAVRKALQSISQQLIENPPRDHD 260



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
 Frame = -3

Query: 458 NKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQI 279
           +K  S++ RLLV ++Q+GC+LGK G II E+R  +   IRIL K++VP CA   +EV+QI
Sbjct: 403 SKDKSLMARLLVSSNQIGCLLGKGGAIIAEMRKSSGAHIRILGKDQVPKCASEGEEVVQI 462

Query: 278 TGKDMPALKKAVMAITDRLVKNPPRERDLLAPNRPNQPPSL---PHQENYQSRKSSSLVQ 108
            G +   + +A++ IT RL  +  R+    + N P+ P  L   P   ++  R+  S   
Sbjct: 463 NG-EHDTVCEALLQITTRLRHHFFRDA-FPSINHPSNPAFLDQGPPFPSFMGRREFS--- 517

Query: 107 XXXXXXXXXXXXPDYHSKPPHSGPHMREPP 18
                         +   PPH G H  + P
Sbjct: 518 --PPGLGPFHHFDAFGGPPPHGGFHPHDDP 545


>ref|XP_002533123.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223527086|gb|EEF29268.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 405

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 47/95 (49%), Positives = 68/95 (71%)
 Frame = -3

Query: 443 VLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDM 264
           V  RL+VP+ Q+GC++GK G+I+Q IR+ET  QIRIL  E +PPCAL++DE++QI+G ++
Sbjct: 13  VTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRILKDEHLPPCALSTDELVQISG-EV 71

Query: 263 PALKKAVMAITDRLVKNPPRERDLLAPNRPNQPPS 159
             +KKA+  I  RL +NP R + LL    PN  P+
Sbjct: 72  AVVKKALYQIATRLHENPSRTQHLLFSAVPNVYPA 106



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 48/113 (42%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
 Frame = -3

Query: 446 SVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKD 267
           S   RLLVPTS++GC+LGK G II E+R  T   IRIL K+ +P  A   DE++QI+G D
Sbjct: 240 SFTTRLLVPTSRIGCLLGKGGVIINEMRKVTKANIRILGKDNLPKVASEDDEMVQISG-D 298

Query: 266 MPALKKAVMAITDRLVKNP-PRER--DLLAPNRPNQPPSLPHQE--NYQSRKS 123
           +   K A+  ++ RL  N   RE       P  P  P S    +  NY SR S
Sbjct: 299 LDVAKDALTHVSRRLRANAFDREGAVSTFLPVLPYLPVSADGSDSLNYDSRDS 351


>ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
           [Glycine max] gi|571459642|ref|XP_006581471.1|
           PREDICTED: KH domain-containing protein At4g18375-like
           isoform X2 [Glycine max]
          Length = 676

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 44/91 (48%), Positives = 68/91 (74%)
 Frame = -3

Query: 458 NKTGSVLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQI 279
           NK  S  +RLL+ T+QVGCVLGK G +I+ +  E+  QIRIL K+K+P CA ASDE++QI
Sbjct: 172 NKPSSFFLRLLILTAQVGCVLGKGGSVIKRMAAESGAQIRILPKDKLPACASASDEIVQI 231

Query: 278 TGKDMPALKKAVMAITDRLVKNPPRERDLLA 186
           +G  +  ++KA+ +++ +L++NPPR+ D L+
Sbjct: 232 SG-SVEVVRKALQSVSQQLLENPPRDHDSLS 261



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
 Frame = -3

Query: 443 VLIRLLVPTSQVGCVLGKAGKIIQEIRTETDTQIRILSKEKVPPCALASDEVIQITGKDM 264
           +L R LV ++Q+GC+LGK G II E+R ++   IRIL K+KVP CA   +EVIQ+ G ++
Sbjct: 410 MLARFLVSSTQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNG-EI 468

Query: 263 PALKKAVMAITDRLVKNPPRERDLLAPNRPNQPP---SLPHQENYQSRKSSSLVQXXXXX 93
            A+  A++ IT RL  +  R+    + N P+  P    LP    Y  R+  S        
Sbjct: 469 EAVHDALLQITTRLKHHCFRD-SYPSVNYPSNSPFLDQLPPFPPYLGRRGLS-------- 519

Query: 92  XXXXXXXPDYHSKPPHSGPHMREPPSNLN 6
                   D     PH+G  + + P  LN
Sbjct: 520 --PPRMYSDLGHPHPHAGFPLDDRPPFLN 546