BLASTX nr result

ID: Ephedra26_contig00009820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00009820
         (869 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315168.1| hypothetical protein POPTR_0010s19890g [Popu...    63   2e-07
gb|EMJ03570.1| hypothetical protein PRUPE_ppa009270mg [Prunus pe...    61   6e-07
ref|XP_006299610.1| hypothetical protein CARUB_v10015789mg [Caps...    59   2e-06
ref|XP_006399925.1| hypothetical protein EUTSA_v10015617mg [Eutr...    59   3e-06
ref|XP_006588160.1| PREDICTED: B3 domain-containing transcriptio...    58   4e-06
ref|XP_003600455.1| B3 domain-containing transcription factor VR...    57   7e-06

>ref|XP_002315168.1| hypothetical protein POPTR_0010s19890g [Populus trichocarpa]
           gi|222864208|gb|EEF01339.1| hypothetical protein
           POPTR_0010s19890g [Populus trichocarpa]
          Length = 341

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
 Frame = +2

Query: 476 RKKRTKMPEFRVTIKKKNIVNHYLNIPKEMGESLEQGGKAFVLTIMSGSQEWKVKLLRS- 652
           R  + K P F V +++ N  NH+L +P E  +         +   +S  +EW +++ R+ 
Sbjct: 230 RMFKPKSPSFMVMLRRYNFYNHFLYVPLEFAQRHLSDAPRCIKLQVSDGREWPIQINRNQ 289

Query: 653 CNSWMLSAGWRKLLEDHRMKVGDECVFSLVDPHKLAFKLEI 775
           C    +S GW +  +++ +K GD CVF L++  K   K+ I
Sbjct: 290 CRYLSISKGWNEFSQENNLKEGDVCVFELINKEKFVLKVAI 330


>gb|EMJ03570.1| hypothetical protein PRUPE_ppa009270mg [Prunus persica]
          Length = 299

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 36/105 (34%), Positives = 52/105 (49%)
 Frame = +2

Query: 467 ERERKKRTKMPEFRVTIKKKNIVNHYLNIPKEMGESLEQGGKAFVLTIMSGSQEWKVKLL 646
           E  +K  +K P FR  +++  +    L IPK    S    GK   + +    + W VK +
Sbjct: 194 EAAKKFSSKHPFFRAIMRQAYVDKGRLVIPKSFQTSCI--GKKKYVRLQDSMRRWIVKCI 251

Query: 647 RSCNSWMLSAGWRKLLEDHRMKVGDECVFSLVDPHKLAFKLEICR 781
              NS  LSAGW + + D  +KVGD CVF L+D +    K+ I R
Sbjct: 252 SRRNSSRLSAGWYQFVRDRALKVGDVCVFELIDRNDAVMKVSIFR 296


>ref|XP_006299610.1| hypothetical protein CARUB_v10015789mg [Capsella rubella]
           gi|482568319|gb|EOA32508.1| hypothetical protein
           CARUB_v10015789mg [Capsella rubella]
          Length = 331

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = +2

Query: 470 RERKKRTKMPEFRVTIKKKNIVNHYLNIPKE-MGESLEQGGKAFVLTIMSGSQEWKVKLL 646
           +  KK T  PEF++TI+   +   +L IPK  + + L Q  K F +    G + WKV  L
Sbjct: 219 KRNKKMTGAPEFKITIRNSYL--KFLAIPKHFVDDHLPQKSKFFTIHHPDGLKSWKVLCL 276

Query: 647 RSCNSWMLSAGWRKLLEDHRMKVGDECVFSLVDPHKLAFKLEICR 781
                 + S G+ KL  ++ + VGD+C F L++P+  AF L+I +
Sbjct: 277 VREIRTIFSGGYSKLAREYPLLVGDKCTFKLIEPY--AFILDISK 319


>ref|XP_006399925.1| hypothetical protein EUTSA_v10015617mg [Eutrema salsugineum]
           gi|557101015|gb|ESQ41378.1| hypothetical protein
           EUTSA_v10015617mg [Eutrema salsugineum]
          Length = 297

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
 Frame = +2

Query: 470 RERKKRTKMPEFRVTIKKKNIVNHYLNIPKEMGES-LEQGGKAFVLTIMSGSQEWKVKLL 646
           R +K +  +P+F++TI+K  +   +L IPK   E  +      F +    G+  W+V  L
Sbjct: 187 RSKKDKNGVPKFKITIRKSYL--KFLAIPKRFVEGHIPNKSTIFTIHHWKGNCSWEVLCL 244

Query: 647 RSCNSWMLSAGWRKLLEDHRMKVGDECVFSLVDPHKL 757
              N  + S+GW KL  ++ + +GD C+F L+ P +L
Sbjct: 245 VRENRTIFSSGWTKLAREYPLLIGDRCIFKLIKPTEL 281


>ref|XP_006588160.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Glycine max]
          Length = 265

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
 Frame = +2

Query: 425 GMFEKKRGRVEVDCERERKK----RTKMPEFRVTIKKKNIVNHYLNIPKEMGESLEQGGK 592
           G+F  +  +VE       KK    R++ P FR+ +K   I  +YL IP +  E   +   
Sbjct: 112 GIFNTEYPKVEQSTSTALKKASTFRSEHPFFRLVMKPSFINGYYLEIPPQFAERYLKKTH 171

Query: 593 AFVLTIMSGSQEWKVKLLRSCNSWMLSAGWRKLLEDHRMKVGDECVFSLVDP-HKLAFKL 769
           A V+  +   + W V     C++  L+ GW+K   ++ + VGD CVF L+     L FK+
Sbjct: 172 AIVILEILDGRTWSV----ICSATRLTEGWQKFASENNLNVGDVCVFELIQKIQGLCFKV 227

Query: 770 EI 775
            I
Sbjct: 228 SI 229


>ref|XP_003600455.1| B3 domain-containing transcription factor VRN1 [Medicago
           truncatula] gi|358349332|ref|XP_003638692.1| B3
           domain-containing transcription factor VRN1 [Medicago
           truncatula] gi|355489503|gb|AES70706.1| B3
           domain-containing transcription factor VRN1 [Medicago
           truncatula] gi|355504627|gb|AES85830.1| B3
           domain-containing transcription factor VRN1 [Medicago
           truncatula]
          Length = 281

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
 Frame = +2

Query: 497 PEFRVTIKKKNIVNHYLNIPKEMGESLEQGGKAFVLTIMSGSQEWKVKLLRSC---NSWM 667
           P F + IK  N+V H  ++P   G    +     +L    G + W VKLLRS    N   
Sbjct: 188 PFFTILIKPINLVEHTRSVPDLKGVIENKDTNVMLLI---GKRSWNVKLLRSYEGKNGRR 244

Query: 668 LSAGWRKLLEDHRMKVGDECVFSLVDPHKLAFKLEI 775
           LSAGW     +  +K GD CVF L++   L FK+ +
Sbjct: 245 LSAGWYLFARESGLKSGDVCVFELINKKDLVFKIHV 280


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