BLASTX nr result
ID: Ephedra26_contig00009749
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00009749
(1010 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE76324.1| unknown [Picea sitchensis] gi|294463669|gb|ADE773... 527 e-147
ref|XP_004515806.1| PREDICTED: replication factor C subunit 2-li... 517 e-144
gb|ESW27549.1| hypothetical protein PHAVU_003G211700g [Phaseolus... 516 e-144
ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-li... 516 e-144
ref|XP_006358877.1| PREDICTED: replication factor C subunit 2-li... 514 e-143
gb|AFK40126.1| unknown [Medicago truncatula] 513 e-143
ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-li... 512 e-143
ref|XP_002509739.1| replication factor C / DNA polymerase III ga... 512 e-143
gb|EOY24642.1| Replication factor C 2 isoform 1 [Theobroma cacao... 512 e-142
ref|XP_002304476.1| replication factor C 40 kDa family protein [... 512 e-142
ref|XP_006857848.1| hypothetical protein AMTR_s00069p00063160 [A... 511 e-142
ref|XP_004245638.1| PREDICTED: replication factor C subunit 2-li... 511 e-142
ref|XP_003549857.1| PREDICTED: replication factor C subunit 2-li... 510 e-142
ref|XP_002446951.1| hypothetical protein SORBIDRAFT_06g025740 [S... 510 e-142
ref|XP_003580347.1| PREDICTED: replication factor C subunit 2-li... 510 e-142
ref|XP_006652657.1| PREDICTED: replication factor C subunit 4-li... 509 e-142
gb|EMJ01585.1| hypothetical protein PRUPE_ppa008426mg [Prunus pe... 509 e-142
ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [V... 509 e-142
dbj|BAB69675.1| replication factor C 40kDa subunit [Oryza sativa... 508 e-141
ref|XP_006302449.1| hypothetical protein CARUB_v10020535mg, part... 508 e-141
>gb|ADE76324.1| unknown [Picea sitchensis] gi|294463669|gb|ADE77361.1| unknown
[Picea sitchensis]
Length = 335
Score = 527 bits (1358), Expect = e-147
Identities = 264/327 (80%), Positives = 295/327 (90%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS +A+ DLPWVEK+RP+KV DI+GN +A+SRLQ+IARDGNMPNLIL+GPPGTGKTTS+L
Sbjct: 9 SSSAANYDLPWVEKYRPSKVSDIVGNQDALSRLQVIARDGNMPNLILAGPPGTGKTTSIL 68
Query: 187 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 366
ALAHELLGS++K V+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHKIIILDEADSMT
Sbjct: 69 ALAHELLGSNYKEGVIELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMT 128
Query: 367 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 546
GAQQALRRTMEI+SN+TRFALACNTS+KIIEPIQSRCAIVRFS+LSD+EILGRL+ VV+
Sbjct: 129 GGAQQALRRTMEIFSNSTRFALACNTSAKIIEPIQSRCAIVRFSKLSDQEILGRLMRVVE 188
Query: 547 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 726
AE+V YVPEGLEAI+FTADGDMRQALNNLQAT+SGFQFVNQENVFKVCDQPHPLHVK M+
Sbjct: 189 AEKVAYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQENVFKVCDQPHPLHVKSMV 248
Query: 727 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 906
++VLEGNFDEA +RLK LY+LGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI
Sbjct: 249 QNVLEGNFDEACSRLKNLYDLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 308
Query: 907 XXXXXXXXXXXXXXXXXXIVRENAKAA 987
IVR+ +KAA
Sbjct: 309 SDGVGSLLQLSGLLAKLSIVRDTSKAA 335
>ref|XP_004515806.1| PREDICTED: replication factor C subunit 2-like [Cicer arietinum]
Length = 332
Score = 517 bits (1332), Expect = e-144
Identities = 260/327 (79%), Positives = 291/327 (88%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS SA D+PWVEK+RP+KV DI+GN +AVSRLQ+IARDGNMPN+ILSGP GTGKTTS+L
Sbjct: 6 SSNSAIYDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNIILSGPSGTGKTTSIL 65
Query: 187 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 366
ALAHELLG +++ AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHKI+ILDEADSMT
Sbjct: 66 ALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMT 125
Query: 367 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 546
+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGRL+ VVQ
Sbjct: 126 SGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQ 185
Query: 547 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 726
AE+VPYVPEGLEAI+FTADGDMRQALNNLQAT+SGFQFVNQ NVFKVCDQPHPLHVK M+
Sbjct: 186 AEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMV 245
Query: 727 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 906
++V+EGNFDEA + LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFAHMRI
Sbjct: 246 RNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRI 305
Query: 907 XXXXXXXXXXXXXXXXXXIVRENAKAA 987
+VRE AKAA
Sbjct: 306 CDGVGSYLQMCGLLAKLSLVRETAKAA 332
>gb|ESW27549.1| hypothetical protein PHAVU_003G211700g [Phaseolus vulgaris]
Length = 330
Score = 516 bits (1329), Expect = e-144
Identities = 260/326 (79%), Positives = 287/326 (88%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS S D+PWVEK+RP KV DI+GN +AVSRLQ+IARDGNMPNLILSGPPGTGKTTS+L
Sbjct: 4 SSASNTYDVPWVEKYRPNKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSIL 63
Query: 187 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 366
ALAHELLG + K V+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHKI+ILDEADSMT
Sbjct: 64 ALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMT 123
Query: 367 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 546
TGAQQALRRTMEIYSN+TRFALACNTS+KIIEPIQSRCAIVRFSRL D+EILGRL+ VVQ
Sbjct: 124 TGAQQALRRTMEIYSNSTRFALACNTSAKIIEPIQSRCAIVRFSRLLDQEILGRLMIVVQ 183
Query: 547 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 726
AE+VPYVPEGLEAI+FTADGDMRQALNNLQAT+SGFQFVNQ NVFKVCDQPHPLHVK M+
Sbjct: 184 AEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMV 243
Query: 727 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 906
++V+EGNFDEA + LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFAHMRI
Sbjct: 244 RNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRI 303
Query: 907 XXXXXXXXXXXXXXXXXXIVRENAKA 984
+VRENAKA
Sbjct: 304 CDGVGSYLQLCGLLAKLSLVRENAKA 329
>ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-like [Cucumis sativus]
gi|449494241|ref|XP_004159490.1| PREDICTED: replication
factor C subunit 2-like [Cucumis sativus]
Length = 331
Score = 516 bits (1328), Expect = e-144
Identities = 255/326 (78%), Positives = 288/326 (88%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
S S++ D+PWVEK+RP KV DI+GN +AVSRLQ+IARDGNMPNLILSGPPGTGKTTS+L
Sbjct: 5 SGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSIL 64
Query: 187 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 366
ALAHELLG ++K V+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHK++ILDEADSMT
Sbjct: 65 ALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMT 124
Query: 367 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 546
TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRL+D+EILGRL+ V+Q
Sbjct: 125 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVIQ 184
Query: 547 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 726
AE+VPYVPEGLEAI+FTADGDMRQALNNLQATHSGF+FVNQ+NVFKVCDQPHPLHVK ++
Sbjct: 185 AEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVKNVV 244
Query: 727 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 906
++VLEG FD+A L+ LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFAHMRI
Sbjct: 245 RNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRI 304
Query: 907 XXXXXXXXXXXXXXXXXXIVRENAKA 984
+VRE AKA
Sbjct: 305 CDGVGSYLQLCGLLAKLSMVRETAKA 330
>ref|XP_006358877.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
Length = 331
Score = 514 bits (1323), Expect = e-143
Identities = 257/327 (78%), Positives = 287/327 (87%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS S+ ++PWVEKFRPTKV DI+GN +AVSRLQ+IARDGNMPNLIL+GPPGTGKTTS+L
Sbjct: 5 SSTSSGPEIPWVEKFRPTKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSIL 64
Query: 187 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 366
ALAHELLG ++K AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHKIIILDEADSMT
Sbjct: 65 ALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMT 124
Query: 367 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 546
+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCA+VRF+RLSD+EILGRL+ VV
Sbjct: 125 SGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMAVVA 184
Query: 547 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 726
AE+V YVPEGLEAI+FTADGDMRQ LNNLQATHSGF FVNQENVFKVCDQPHPLHVK M+
Sbjct: 185 AEKVAYVPEGLEAIIFTADGDMRQGLNNLQATHSGFGFVNQENVFKVCDQPHPLHVKNMV 244
Query: 727 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 906
++VLEG FD+A LK LY+LGYS TDIITTLFR+IKNYDM EY+KLEF++ETGFAHMRI
Sbjct: 245 RNVLEGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGFAHMRI 304
Query: 907 XXXXXXXXXXXXXXXXXXIVRENAKAA 987
+VRE AKAA
Sbjct: 305 CDGVGSYLQMCGLLAKLSLVRETAKAA 331
>gb|AFK40126.1| unknown [Medicago truncatula]
Length = 333
Score = 513 bits (1320), Expect = e-143
Identities = 256/327 (78%), Positives = 289/327 (88%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS +A D+PWVEK+RP+KV DI+GN +AVSRLQ+IARDGNMPNLILSGPPGTGKTTS+L
Sbjct: 7 SSNTASYDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSIL 66
Query: 187 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 366
ALAHELLG +++ AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHK++ILDEADSMT
Sbjct: 67 ALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMT 126
Query: 367 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 546
+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGRL+ VVQ
Sbjct: 127 SGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQ 186
Query: 547 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 726
AE+VPYVPEGLEAI+FTADGDMRQ LNNLQAT SGFQFVNQ NVFKVCDQPHPLHVK M+
Sbjct: 187 AEKVPYVPEGLEAIIFTADGDMRQGLNNLQATFSGFQFVNQANVFKVCDQPHPLHVKNMV 246
Query: 727 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 906
++V+EGNFDEA + LK LY+LGYS TDIITTLFR+IK+YDM EYLKLEF++ETGFAHMRI
Sbjct: 247 RNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKSYDMAEYLKLEFMKETGFAHMRI 306
Query: 907 XXXXXXXXXXXXXXXXXXIVRENAKAA 987
+VR+ A AA
Sbjct: 307 CDGVGSYLQMCGLLAKFALVRDTANAA 333
>ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
Length = 331
Score = 512 bits (1319), Expect = e-143
Identities = 261/327 (79%), Positives = 288/327 (88%), Gaps = 1/327 (0%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS S D+PWVEK+RP+KV DI+GN +AVSRLQ+IARDGNMPNLILSGPPGTGKTTS+L
Sbjct: 4 SSSSNAYDVPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSIL 63
Query: 187 ALAHELLGS-HFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSM 363
ALAHELLG + K AV+ELNASDDRGIDVVRNKIK FAQ+KVTL PGRHKI+ILDEADSM
Sbjct: 64 ALAHELLGGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLTPGRHKIVILDEADSM 123
Query: 364 TTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVV 543
TTGAQQALRRTMEIYSNTTRFALACNTS+KIIEPIQSRCAIVRFSRLSD+EILGRL+ VV
Sbjct: 124 TTGAQQALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMVVV 183
Query: 544 QAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGM 723
QAE+VPYVPEGLEAI+FTADGDMRQALNNLQAT+SGFQFVNQ NVFKVCDQPHPLHVK M
Sbjct: 184 QAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNM 243
Query: 724 IKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMR 903
+++V+EGNFDEA + LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFAHMR
Sbjct: 244 VRNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMR 303
Query: 904 IXXXXXXXXXXXXXXXXXXIVRENAKA 984
I +VRE AKA
Sbjct: 304 ICDGVGSYLQLCGLLAKLSLVRETAKA 330
>ref|XP_002509739.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis] gi|223549638|gb|EEF51126.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 333
Score = 512 bits (1319), Expect = e-143
Identities = 253/327 (77%), Positives = 291/327 (88%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS + + D+PWVEK+RP+K+ DI+GN +AVSRLQ+IARDGNMPNLILSGPPGTGKTTS+L
Sbjct: 7 SSATQNYDVPWVEKYRPSKICDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSIL 66
Query: 187 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 366
ALAHELLG ++K AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHK++ILDEADSMT
Sbjct: 67 ALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMT 126
Query: 367 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 546
+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCA+VRFSRLSD+EILGRL+ VVQ
Sbjct: 127 SGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLIIVVQ 186
Query: 547 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 726
AE+VPYVPEGLEAI+FTADGDMRQALNNLQAT+SGF+FVNQENVFKVCDQPHPLHVK M+
Sbjct: 187 AEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMV 246
Query: 727 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 906
+ V+EG +D+A + LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFAHMRI
Sbjct: 247 RHVMEGKYDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRI 306
Query: 907 XXXXXXXXXXXXXXXXXXIVRENAKAA 987
+VR+ A+AA
Sbjct: 307 CDGVGSYLQLCGLLAKLALVRDTARAA 333
>gb|EOY24642.1| Replication factor C 2 isoform 1 [Theobroma cacao]
gi|508777388|gb|EOY24644.1| Replication factor C 2
isoform 1 [Theobroma cacao]
Length = 332
Score = 512 bits (1318), Expect = e-142
Identities = 258/327 (78%), Positives = 286/327 (87%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS S D+PWVEK+RP KV DI+GN +AVSRLQ+IA DGNMPNLILSGPPGTGKTTS+L
Sbjct: 6 SSSSGGYDVPWVEKYRPNKVSDIVGNEDAVSRLQVIAHDGNMPNLILSGPPGTGKTTSIL 65
Query: 187 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 366
ALAHELLG+++K AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHKI+ILDEADSMT
Sbjct: 66 ALAHELLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMT 125
Query: 367 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 546
+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCA+VRFSRLSD+EILGRL+ VV
Sbjct: 126 SGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVD 185
Query: 547 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 726
AE+VPYVPEGLEAI+FTADGDMRQALNNLQAT SGF+FVNQENVFKVCDQPHPLHVK M+
Sbjct: 186 AEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMV 245
Query: 727 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 906
+ VLEG FD+A LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFAHMRI
Sbjct: 246 RYVLEGRFDDACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRI 305
Query: 907 XXXXXXXXXXXXXXXXXXIVRENAKAA 987
+VRE AKAA
Sbjct: 306 CDGVGSYLQLCGLLAKFSLVRETAKAA 332
>ref|XP_002304476.1| replication factor C 40 kDa family protein [Populus trichocarpa]
gi|222841908|gb|EEE79455.1| replication factor C 40 kDa
family protein [Populus trichocarpa]
Length = 330
Score = 512 bits (1318), Expect = e-142
Identities = 255/327 (77%), Positives = 288/327 (88%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS S++ D+PWVEK+RP KV DI+GN +AVSRLQ+IARDGNMPNLIL+GPPGTGKTTS+L
Sbjct: 4 SSNSSNYDIPWVEKYRPNKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGKTTSIL 63
Query: 187 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 366
ALAHELLG + K AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPG+HKI+ILDEADSMT
Sbjct: 64 ALAHELLGPNSKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIVILDEADSMT 123
Query: 367 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 546
+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGRL+ VV
Sbjct: 124 SGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVG 183
Query: 547 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 726
AE+VPYVPEGLEAI+FTADGDMRQALNNLQATHSGF FVNQENVFKVCDQPHPLHVK M+
Sbjct: 184 AEQVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFHFVNQENVFKVCDQPHPLHVKNMV 243
Query: 727 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 906
+ VLEG FD+A + LK LY++GYS TDIITTLFR+IKNYDM EY+KLEF++ETGFAHMRI
Sbjct: 244 RQVLEGKFDDACSGLKHLYDMGYSPTDIITTLFRIIKNYDMAEYMKLEFMKETGFAHMRI 303
Query: 907 XXXXXXXXXXXXXXXXXXIVRENAKAA 987
+VR+ A+AA
Sbjct: 304 CDGVGSYLQLCGLLAKLALVRDTARAA 330
>ref|XP_006857848.1| hypothetical protein AMTR_s00069p00063160 [Amborella trichopoda]
gi|548861950|gb|ERN19315.1| hypothetical protein
AMTR_s00069p00063160 [Amborella trichopoda]
Length = 331
Score = 511 bits (1317), Expect = e-142
Identities = 255/326 (78%), Positives = 288/326 (88%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS S +LPWVEK+RP KV +++GN +AVSRLQ+IARDGNMPNLILSGPPGTGKT+S+L
Sbjct: 5 SSSSGGYELPWVEKYRPVKVAEVVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKTSSIL 64
Query: 187 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 366
ALAHELLG++FK AV+ELNASDDRGIDVVRNKIK FAQ+KVTL PGRHKII+LDEADSMT
Sbjct: 65 ALAHELLGTNFKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLSPGRHKIIVLDEADSMT 124
Query: 367 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 546
TGAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGRL+ VV
Sbjct: 125 TGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVD 184
Query: 547 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 726
AE+VPYVPEGLEA++FTADGDMRQALNNLQAT+SGF+FVNQENVFKVCDQPHPLHVK M+
Sbjct: 185 AEKVPYVPEGLEAVIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMV 244
Query: 727 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 906
++V++G F+EA + LK LY+LGYS TDIITTLFR+IKNYDMPEYLKLEF++ETGFAHMRI
Sbjct: 245 RNVIDGKFEEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFLKETGFAHMRI 304
Query: 907 XXXXXXXXXXXXXXXXXXIVRENAKA 984
VRE AKA
Sbjct: 305 CDGVGSLLQLCGLLAKLSRVRETAKA 330
>ref|XP_004245638.1| PREDICTED: replication factor C subunit 2-like [Solanum
lycopersicum]
Length = 331
Score = 511 bits (1317), Expect = e-142
Identities = 255/327 (77%), Positives = 287/327 (87%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS S+ ++PWVEKFRPTKV DI+GN +AV+RLQ+IARDGNMPNLIL+GPPGTGKTTS+L
Sbjct: 5 SSTSSGPEIPWVEKFRPTKVSDIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSIL 64
Query: 187 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 366
ALAHELLG ++K AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHKIIILDEADSMT
Sbjct: 65 ALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMT 124
Query: 367 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 546
+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCA+VRF+RLSD+EILGRL+ VV
Sbjct: 125 SGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMAVVA 184
Query: 547 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 726
AE+V YVPEGLEAI+FTADGDMRQ LNNLQATHSGF FVNQENVFKVCDQPHPLHVK M+
Sbjct: 185 AEKVAYVPEGLEAIIFTADGDMRQGLNNLQATHSGFGFVNQENVFKVCDQPHPLHVKNMV 244
Query: 727 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 906
++VLEG FD+A LK LY+LGYS TDIITTLFR+IKNYDM EY+KLEF++ETGFAHMRI
Sbjct: 245 RNVLEGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGFAHMRI 304
Query: 907 XXXXXXXXXXXXXXXXXXIVRENAKAA 987
+VRE AKA+
Sbjct: 305 CDGVGSYLQMCGLLAKLSLVRETAKAS 331
>ref|XP_003549857.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
Length = 332
Score = 510 bits (1314), Expect = e-142
Identities = 261/327 (79%), Positives = 287/327 (87%), Gaps = 1/327 (0%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS S D+PWVEK+RP+KV DI+GN +AVSRLQ+IARDGNMPNLILSGPPGTGKTTS+L
Sbjct: 5 SSSSNAYDVPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSIL 64
Query: 187 ALAHELLGS-HFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSM 363
ALAHELLG + K AV+ELNASDDRGIDVVRNKIK FAQ+KVTL PGRHKI+ILDEADSM
Sbjct: 65 ALAHELLGGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLTPGRHKIVILDEADSM 124
Query: 364 TTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVV 543
TTGAQQALRRTMEIYSNTTRFALACNTS+KIIEPIQSRCAIVRFSRLSD+EILGRL+ VV
Sbjct: 125 TTGAQQALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMVVV 184
Query: 544 QAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGM 723
QAE+VPYVPEGLEAI+FTADGDMRQALNNLQAT+SGFQFVNQ NVFKVCDQPHPLHVK M
Sbjct: 185 QAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNM 244
Query: 724 IKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMR 903
+ +V+EGNFDEA + LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFAHMR
Sbjct: 245 VCNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMR 304
Query: 904 IXXXXXXXXXXXXXXXXXXIVRENAKA 984
I +VRE AKA
Sbjct: 305 ICDGVGSYLQLCGLLAKLSLVRETAKA 331
>ref|XP_002446951.1| hypothetical protein SORBIDRAFT_06g025740 [Sorghum bicolor]
gi|241938134|gb|EES11279.1| hypothetical protein
SORBIDRAFT_06g025740 [Sorghum bicolor]
Length = 333
Score = 510 bits (1314), Expect = e-142
Identities = 257/329 (78%), Positives = 287/329 (87%), Gaps = 3/329 (0%)
Frame = +1
Query: 7 SSWSAHGD---LPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTT 177
SS +AH D +PWVEK+RP +V D++GNS+AV+RL++IARDGNMPNLILSGPPGTGKTT
Sbjct: 4 SSAAAHADTYDIPWVEKYRPNRVADVVGNSDAVARLEVIARDGNMPNLILSGPPGTGKTT 63
Query: 178 SVLALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEAD 357
S+LALAHELLG ++ AV+ELNASDDRG+DVVRNKIK FAQ+KVTL PGRHKI+ILDEAD
Sbjct: 64 SILALAHELLGPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILDEAD 123
Query: 358 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLH 537
SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGRL+
Sbjct: 124 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMI 183
Query: 538 VVQAEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVK 717
VV AE+VPYVPEGLEAI+FTADGDMRQALNNLQAT SGF+FVNQENVFKVCDQPHPLHVK
Sbjct: 184 VVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVK 243
Query: 718 GMIKDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAH 897
M+K+VL+G FDEA LK LY+LGYS TDIITTLFRV+KNYDMPEYLKLE ++ETGFAH
Sbjct: 244 NMVKNVLDGKFDEACAALKQLYDLGYSPTDIITTLFRVVKNYDMPEYLKLEMLKETGFAH 303
Query: 898 MRIXXXXXXXXXXXXXXXXXXIVRENAKA 984
MRI +VRE AKA
Sbjct: 304 MRICDGVGSFLQLSGLLAKFALVREIAKA 332
>ref|XP_003580347.1| PREDICTED: replication factor C subunit 2-like [Brachypodium
distachyon]
Length = 333
Score = 510 bits (1313), Expect = e-142
Identities = 253/319 (79%), Positives = 283/319 (88%)
Frame = +1
Query: 28 DLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVLALAHELL 207
D+PWVEK+RP++V D++GNS+AVSRL++IARDGNMPNLILSGPPGTGKTTS+LALAHE+L
Sbjct: 15 DIPWVEKYRPSRVADVVGNSDAVSRLEVIARDGNMPNLILSGPPGTGKTTSILALAHEML 74
Query: 208 GSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMTTGAQQAL 387
G ++ V+ELNASDDRG+DVVRNKIK FAQ+KVTLPPGRHKI+ILDEADSMTTGAQQAL
Sbjct: 75 GPSYREGVLELNASDDRGLDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTTGAQQAL 134
Query: 388 RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQAEEVPYV 567
RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGRL+ VV AE+VPYV
Sbjct: 135 RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVAAEKVPYV 194
Query: 568 PEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMIKDVLEGN 747
PEGLEAI+FTADGDMRQALNNLQAT SGF+FVNQENVFKVCDQPHPLHVK M+K+VL+G
Sbjct: 195 PEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPHPLHVKNMVKNVLDGK 254
Query: 748 FDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRIXXXXXXX 927
FDEA + LK LY+LGYS TDIITTLFRV+KNYDM EYLKLE ++ETGFAHMRI
Sbjct: 255 FDEACSGLKQLYDLGYSPTDIITTLFRVVKNYDMAEYLKLELLKETGFAHMRICDGVGSF 314
Query: 928 XXXXXXXXXXXIVRENAKA 984
IVRE AKA
Sbjct: 315 LQLSGLLAKFAIVRETAKA 333
>ref|XP_006652657.1| PREDICTED: replication factor C subunit 4-like [Oryza brachyantha]
Length = 335
Score = 509 bits (1310), Expect = e-142
Identities = 253/319 (79%), Positives = 283/319 (88%)
Frame = +1
Query: 28 DLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVLALAHELL 207
D+PWVEK+RPT+V D++GNS+AVSRL++IARDGNMPNLILSGPPGTGKTTS+LALAHELL
Sbjct: 17 DIPWVEKYRPTRVADVVGNSDAVSRLEVIARDGNMPNLILSGPPGTGKTTSILALAHELL 76
Query: 208 GSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMTTGAQQAL 387
G ++ AV+ELNASDDRG+DVVRNKIK FAQ+KVTL PGRHK++ILDEADSMT+GAQQAL
Sbjct: 77 GPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKVVILDEADSMTSGAQQAL 136
Query: 388 RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQAEEVPYV 567
RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGRL+ VV AE+VPYV
Sbjct: 137 RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVAAEKVPYV 196
Query: 568 PEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMIKDVLEGN 747
PEGLEAI+FTADGDMRQALNNLQAT SGF+FVNQENVFKVCDQPHPLHVK M+K+VL+G
Sbjct: 197 PEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPHPLHVKNMVKNVLDGK 256
Query: 748 FDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRIXXXXXXX 927
FDEA + LK LY+LGYS TDIITTLFRVIKNYDM EYLKLE ++ETGFAHMRI
Sbjct: 257 FDEACSALKQLYDLGYSPTDIITTLFRVIKNYDMAEYLKLELLKETGFAHMRICDGVGSF 316
Query: 928 XXXXXXXXXXXIVRENAKA 984
+VRE AKA
Sbjct: 317 LQLSGLLAKFALVRETAKA 335
>gb|EMJ01585.1| hypothetical protein PRUPE_ppa008426mg [Prunus persica]
Length = 332
Score = 509 bits (1310), Expect = e-142
Identities = 253/326 (77%), Positives = 287/326 (88%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS S+ D+PWVEK+RP+ V DI+GN +AVSRLQ+IARDGNMPNLIL+GPPGTGKTTS+L
Sbjct: 6 SSSSSAYDIPWVEKYRPSNVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSIL 65
Query: 187 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 366
ALAHELLG ++K AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHK++ILDEADSMT
Sbjct: 66 ALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMT 125
Query: 367 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 546
+GAQQALRRTMEIYSN+TRFALACN SSKIIEPIQSRCA+VRFSRLSD+EILGRL+ VVQ
Sbjct: 126 SGAQQALRRTMEIYSNSTRFALACNVSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVQ 185
Query: 547 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 726
AE+VPYVPEGLEAI+FTADGDMRQALNNLQAT+SGF+FVNQENVFKVCDQPHPLHVK M+
Sbjct: 186 AEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVKNMV 245
Query: 727 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 906
+VLEG FD+A + LK LY+LGYS TDIITT FR+IKNYDM EYLKLEF++ETGFAHMRI
Sbjct: 246 CNVLEGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLEFMKETGFAHMRI 305
Query: 907 XXXXXXXXXXXXXXXXXXIVRENAKA 984
++RE AKA
Sbjct: 306 CDGVGSYLQLCGLLAKLSLIRETAKA 331
>ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [Vitis vinifera]
gi|297742576|emb|CBI34725.3| unnamed protein product
[Vitis vinifera]
Length = 330
Score = 509 bits (1310), Expect = e-142
Identities = 255/326 (78%), Positives = 287/326 (88%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS ++ D+PWVEK+RPTKV DI+GN + VSRLQ+IARDGNMPNLILSGPPGTGKTTSVL
Sbjct: 4 SSSMSNYDMPWVEKYRPTKVADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTGKTTSVL 63
Query: 187 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 366
ALAHELLG++++ AV+ELNASDDRGIDVVRNKIK FAQ+KVTLP G HKI+ILDEADSMT
Sbjct: 64 ALAHELLGANYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGSHKIVILDEADSMT 123
Query: 367 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 546
TGAQQALRRTMEIYSN+TRFALACN SSKIIEPIQSRCAIVRFSRLSD+EILGRL+ VV+
Sbjct: 124 TGAQQALRRTMEIYSNSTRFALACNISSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVE 183
Query: 547 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 726
AE+VP+VPEGLEAI+FTADGDMRQALNNLQAT+SGF+FVNQENVFKVCDQPHPLHVK M+
Sbjct: 184 AEKVPFVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMV 243
Query: 727 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 906
++VLEG FD+A LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFAHMRI
Sbjct: 244 RNVLEGKFDDACYGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRI 303
Query: 907 XXXXXXXXXXXXXXXXXXIVRENAKA 984
+VRE AKA
Sbjct: 304 CDGVGSYLQLCGLLAKLAVVRETAKA 329
>dbj|BAB69675.1| replication factor C 40kDa subunit [Oryza sativa Japonica Group]
gi|116310007|emb|CAH67033.1| OSIGBa0139P06.6 [Oryza
sativa Indica Group] gi|218195393|gb|EEC77820.1|
hypothetical protein OsI_17026 [Oryza sativa Indica
Group]
Length = 335
Score = 508 bits (1309), Expect = e-141
Identities = 253/320 (79%), Positives = 284/320 (88%)
Frame = +1
Query: 28 DLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVLALAHELL 207
D+PWVEK+RPT+V D++GNS+AV+RLQ+IARDGNMPNLILSGPPGTGKTTS+L+LAHELL
Sbjct: 16 DIPWVEKYRPTRVADVVGNSDAVARLQVIARDGNMPNLILSGPPGTGKTTSILSLAHELL 75
Query: 208 GSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMTTGAQQAL 387
G ++ AV+ELNASDDRG+DVVRNKIK FAQ+KVTL PGRHKI+ILDEADSMT+GAQQAL
Sbjct: 76 GPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILDEADSMTSGAQQAL 135
Query: 388 RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQAEEVPYV 567
RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSD+EILGRL+ VV AE+VPYV
Sbjct: 136 RRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVAAEKVPYV 195
Query: 568 PEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMIKDVLEGN 747
PEGLEAI+FTADGDMRQALNNLQAT SGF+FVNQENVFKVCDQPHPLHVK M+K+VL+G
Sbjct: 196 PEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPHPLHVKNMVKNVLDGK 255
Query: 748 FDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRIXXXXXXX 927
FDEA + LK LY+LGYS TDIITTLFRVIKNYDM EYLKLE ++ETGFAHMRI
Sbjct: 256 FDEACSALKQLYDLGYSPTDIITTLFRVIKNYDMAEYLKLELLKETGFAHMRICDGVGSF 315
Query: 928 XXXXXXXXXXXIVRENAKAA 987
+VRE AKA+
Sbjct: 316 LQLSGLLAKFALVRETAKAS 335
>ref|XP_006302449.1| hypothetical protein CARUB_v10020535mg, partial [Capsella rubella]
gi|482571159|gb|EOA35347.1| hypothetical protein
CARUB_v10020535mg, partial [Capsella rubella]
Length = 360
Score = 508 bits (1309), Expect = e-141
Identities = 253/327 (77%), Positives = 289/327 (88%)
Frame = +1
Query: 7 SSWSAHGDLPWVEKFRPTKVQDIIGNSEAVSRLQIIARDGNMPNLILSGPPGTGKTTSVL 186
SS S+ G+ PWVEK+RP+KV DI+GN +AVSRLQ+IARDGNMPNLIL+GPPGTGKTTS+L
Sbjct: 34 SSASSGGEEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSIL 93
Query: 187 ALAHELLGSHFKLAVMELNASDDRGIDVVRNKIKNFAQQKVTLPPGRHKIIILDEADSMT 366
ALAHELLG ++K AV+ELNASDDRGIDVVRNKIK FAQ+KVTLPPGRHK++ILDEADSMT
Sbjct: 94 ALAHELLGKNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMT 153
Query: 367 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDKEILGRLLHVVQ 546
+GAQQALRRT+EIYSN+TRFALACNTS+KIIEPIQSRCA+VRFSRLSD++ILGRL+ VVQ
Sbjct: 154 SGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDEQILGRLMVVVQ 213
Query: 547 AEEVPYVPEGLEAIVFTADGDMRQALNNLQATHSGFQFVNQENVFKVCDQPHPLHVKGMI 726
AE VPYVPEGLEAI+FTADGDMRQALNNLQAT+SGF+ VNQENVFKVCDQPHPLHVK ++
Sbjct: 214 AENVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFRLVNQENVFKVCDQPHPLHVKNIV 273
Query: 727 KDVLEGNFDEAYNRLKGLYNLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGFAHMRI 906
++VLE FD+A + LK LY+LGYS TDIITTLFR+IKNYDM EYLKLEF++ETGFAHMRI
Sbjct: 274 RNVLESKFDDACHGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRI 333
Query: 907 XXXXXXXXXXXXXXXXXXIVRENAKAA 987
IVRE AKAA
Sbjct: 334 CDGVGSYLQLCGLLAKLAIVRETAKAA 360