BLASTX nr result

ID: Ephedra26_contig00009711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00009711
         (660 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22531.1| unknown [Picea sitchensis]                             117   4e-24
ref|XP_006854793.1| hypothetical protein AMTR_s00063p00151320 [A...    68   2e-09

>gb|ABK22531.1| unknown [Picea sitchensis]
          Length = 215

 Score =  117 bits (292), Expect = 4e-24
 Identities = 73/172 (42%), Positives = 95/172 (55%), Gaps = 13/172 (7%)
 Frame = +1

Query: 1   FIGKPLCAIPGDEGLKGGQAYFVLPRKTFEQVLTSSKVVSLIXXXXXXXXXXXXHQGS-- 174
           +IGKP+ AIP DE LK G  YF+LPRK+F+  LT+S V S I              G+  
Sbjct: 54  YIGKPIVAIPSDESLKLGHTYFILPRKSFQCALTASTVASFISKMAVENHANHMQPGASR 113

Query: 175 ----------KPFKII-KKGRALQVKFSPDFLAGEGRRTPCCGYGVHVHAHAQEVCRIAG 321
                     KPFKI+ KKG +LQV+ S  FL G        G G H +  ++       
Sbjct: 114 KNNIYVKMEAKPFKIVQKKGNSLQVQISTSFLNGLSNINDTSG-GCHGYKSSK------- 165

Query: 322 GNNKGICDSFQLMSDYANLVKPAVKPWKPKLSTIREASSSHHAKAFLVKMLN 477
              K +CDS+QLM DYA LV+PA + WKPKLSTI EA  + + K FL+K+L+
Sbjct: 166 ---KRLCDSYQLMEDYAKLVRPASRAWKPKLSTITEAERA-YGKPFLLKLLS 213


>ref|XP_006854793.1| hypothetical protein AMTR_s00063p00151320 [Amborella trichopoda]
           gi|548858497|gb|ERN16260.1| hypothetical protein
           AMTR_s00063p00151320 [Amborella trichopoda]
          Length = 194

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
 Frame = +1

Query: 1   FIGKPLCAIPGDEGLKGGQAYFVLPRKTFEQ-VLTSSKVVSLIXXXXXXXXXXXXHQGSK 177
           ++G  + A+  D+ LK G+ YFV+P   F   VL+ + + SL               G +
Sbjct: 54  YLGHRIPALSLDDILKSGETYFVIPADRFSSHVLSPASLASLALCPGEPLNF-----GDR 108

Query: 178 PFKIIK--KGRALQVKFSPDFLAGEGRRTPCCGYGVHVHAHAQEVCRIAGGNNKGICDSF 351
           PF  +K   G+ L VK SP+F+ G             +   ++E C   GGN   +C + 
Sbjct: 109 PFVYVKGPDGKGL-VKISPEFITG-------------IMTRSEETCE-TGGN---LCSTP 150

Query: 352 QLMSDYANLVKPAVKPWKPKLSTIREASSSHHAKAFLVK 468
           +L   YA LV P  +PW PKL TIRE       +A+L +
Sbjct: 151 ELRKHYAQLVGPRSQPWSPKLDTIRERKPRSPCRAWLTE 189


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