BLASTX nr result

ID: Ephedra26_contig00009693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00009693
         (481 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006854080.1| hypothetical protein AMTR_s00048p00122750 [A...    59   5e-07
ref|XP_006849443.1| hypothetical protein AMTR_s00024p00059840 [A...    57   2e-06

>ref|XP_006854080.1| hypothetical protein AMTR_s00048p00122750 [Amborella trichopoda]
           gi|548857749|gb|ERN15547.1| hypothetical protein
           AMTR_s00048p00122750 [Amborella trichopoda]
          Length = 607

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
 Frame = -3

Query: 266 METKKTKLL---RRVDIDLKQKRAVKYAAYLTSFSKSKISKGVRKCNLNAGLLNSCPDDK 96
           ME K  + L   +RV  DLK+KRA + A+Y ++ +   +S G ++   N  L        
Sbjct: 1   MEVKNGRALGDCKRVHDDLKRKRAARCASYFSNIACPLLSYGSKEQFPNKRLKQELLTTN 60

Query: 95  LIKCCSGKAIVNNYANFNKSSLPVRVMYF 9
             KCCS K+++ NYANF KS LP R+M++
Sbjct: 61  GSKCCSKKSLIRNYANFLKSGLPERLMFY 89


>ref|XP_006849443.1| hypothetical protein AMTR_s00024p00059840 [Amborella trichopoda]
           gi|548853018|gb|ERN11024.1| hypothetical protein
           AMTR_s00024p00059840 [Amborella trichopoda]
          Length = 733

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
 Frame = -3

Query: 227 IDLKQKRAVKYAAYLTSFSKSKIS----KGVRKCNLNAGLLNSCPDDKLIKCCSGKAIVN 60
           + L++KRA +YAAY +  ++S++S    KG+          NSC     ++C S K+IVN
Sbjct: 100 VALRRKRAARYAAYFSGSARSQLSRSKSKGIYGKPCERESFNSCIHG--LRCSSVKSIVN 157

Query: 59  NYANFNKSSLPVRVMYFS 6
           NY NF KS LP R+MY S
Sbjct: 158 NYENFLKSGLPRRLMYLS 175


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