BLASTX nr result
ID: Ephedra26_contig00009616
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00009616
(1056 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ13219.1| hypothetical protein PRUPE_ppa004887mg [Prunus pe... 106 2e-20
ref|XP_002331856.1| predicted protein [Populus trichocarpa] 102 3e-19
ref|XP_001768601.1| predicted protein [Physcomitrella patens] gi... 101 4e-19
ref|XP_006369873.1| hypothetical protein POPTR_0001s34380g [Popu... 100 7e-19
ref|XP_004293660.1| PREDICTED: uncharacterized protein LOC101308... 100 1e-18
ref|XP_006467549.1| PREDICTED: uncharacterized protein LOC102610... 97 8e-18
ref|XP_006449610.1| hypothetical protein CICLE_v10014510mg [Citr... 96 3e-17
gb|EMT02323.1| Ribosome maturation factor rimM [Aegilops tauschii] 96 3e-17
ref|XP_001754433.1| predicted protein [Physcomitrella patens] gi... 94 7e-17
ref|XP_004147429.1| PREDICTED: uncharacterized protein LOC101214... 93 2e-16
ref|XP_004161149.1| PREDICTED: uncharacterized LOC101214658 [Cuc... 92 3e-16
ref|XP_003567886.1| PREDICTED: uncharacterized protein LOC100844... 92 3e-16
ref|XP_002519751.1| conserved hypothetical protein [Ricinus comm... 92 3e-16
ref|XP_006281678.1| hypothetical protein CARUB_v10027818mg [Caps... 92 4e-16
gb|EOY27815.1| 16S rRNA processing protein RimM family, putative... 91 8e-16
ref|XP_002440261.1| hypothetical protein SORBIDRAFT_09g028680 [S... 91 8e-16
ref|XP_004232981.1| PREDICTED: uncharacterized protein LOC101255... 90 1e-15
ref|XP_006355633.1| PREDICTED: uncharacterized protein LOC102604... 89 2e-15
ref|NP_568663.2| RimM-like 16S rRNA processing protein [Arabidop... 89 3e-15
ref|XP_002865193.1| 16S rRNA processing protein RimM family [Ara... 89 3e-15
>gb|EMJ13219.1| hypothetical protein PRUPE_ppa004887mg [Prunus persica]
Length = 487
Score = 106 bits (264), Expect = 2e-20
Identities = 55/143 (38%), Positives = 86/143 (60%), Gaps = 1/143 (0%)
Frame = +3
Query: 123 QNLVNSDDASRVVSIPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMTQEYLPCISKS 302
Q + +D + S+PL++ + + + +F ENDY G E+VWF+ +E LP +SK+
Sbjct: 267 QRFIKMEDRA---SVPLVLVCSAQEIQPLRMHFSENDYFGFVPEKVWFLEEEKLPVVSKA 323
Query: 303 SQ-NSKEKILMGSQWEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQICSLNCSTRIA 479
+ K KILM S WEI ++PVGSG I LS+ N+ E L MG+ Y+++CS N A
Sbjct: 324 VEAEKKHKILMKSPWEILQSPVGSGGIFSLLSSNNIPESLGEMGVEYIEVCSTNPGYAGA 383
Query: 480 DPSFIAFVNKKAAEVGVKLVTGR 548
+P + FVN ++VG+++ GR
Sbjct: 384 NPLLLGFVNSWKSDVGIQIFKGR 406
>ref|XP_002331856.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 102 bits (253), Expect = 3e-19
Identities = 76/276 (27%), Positives = 125/276 (45%), Gaps = 7/276 (2%)
Frame = +3
Query: 93 KSCSDQLLSVQNLVNSDDASRVVSIPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMT 272
KS SD Q V +D VS+PLI+ + ++ F NDY +VWF+
Sbjct: 447 KSLSDD----QTFVKIEDR---VSVPLILVCPAQEIQSLQKLFSNNDYFAFDSNKVWFLE 499
Query: 273 QEYLPCISKSSQNSKE-KILMGSQWEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQI 449
+E +P +S S + K KI+M S WEI ++PVGSG + LS+ N+ E L MG+ Y++I
Sbjct: 500 EEKIPVVSSSEEEGKRHKIMMKSPWEILQSPVGSGGVISLLSSVNIPENLSKMGVEYIEI 559
Query: 450 CSLNCSTRIADPSFIAFVNKKAAEVGVKLVTGRVHGISEETTSGYKDAFP------YALY 611
CS + + P + FV + AE+G+K+V E T +++F +
Sbjct: 560 CSSSQNCVTGSPLLLGFVESRKAEIGIKIV---------EDTKDLEESFDMIFSLNFMRL 610
Query: 612 LKEKESPMELGEIKENNRQNTLLVHRDDNGSACFDMIFTLQYAWRXXXXXXXXXXXXXXX 791
L ++ ++ I + N +H + G D++
Sbjct: 611 LAQQIHKLQFYAIPKPN------LHVEMVGKEWVDVV----------------------- 641
Query: 792 HVSDNTETSNSQNAYQLQSSIYSLLKFSPSDRIALL 899
+S N+Y+L+SSIYS L P ++I ++
Sbjct: 642 --------PSSPNSYELRSSIYSSLNACPLEKICVM 669
>ref|XP_001768601.1| predicted protein [Physcomitrella patens]
gi|162680100|gb|EDQ66539.1| predicted protein
[Physcomitrella patens]
Length = 394
Score = 101 bits (252), Expect = 4e-19
Identities = 52/147 (35%), Positives = 86/147 (58%), Gaps = 1/147 (0%)
Frame = +3
Query: 102 SDQLLSVQNLVNSDDASRVVSIPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMTQEY 281
+D+LL VQ L IP I+ ++ S+F++ +Y GL+E QVWF+ Q+
Sbjct: 58 ADRLLLVQELAAQVYPEAAPQIPWIVLTSDATDVSTRSFFEKKEYFGLKESQVWFVKQDS 117
Query: 282 LPCISKSSQNSKEKILMGSQWEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQICSL- 458
LPC+ N+ IL+ S W+++ AP G+G + +L QN+ +RL G+ Y+Q+ S+
Sbjct: 118 LPCVDYKEGNA---ILLESPWKLAVAPTGNGGLFSALHAQNITDRLSEEGVQYVQVYSVD 174
Query: 459 NCSTRIADPSFIAFVNKKAAEVGVKLV 539
N R+ DP F + +++ A+VGVK+V
Sbjct: 175 NALVRVGDPVFFGYAHEQKADVGVKVV 201
>ref|XP_006369873.1| hypothetical protein POPTR_0001s34380g [Populus trichocarpa]
gi|550348842|gb|ERP66442.1| hypothetical protein
POPTR_0001s34380g [Populus trichocarpa]
Length = 673
Score = 100 bits (250), Expect = 7e-19
Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 7/276 (2%)
Frame = +3
Query: 93 KSCSDQLLSVQNLVNSDDASRVVSIPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMT 272
KS SD Q V +D VS+PLI+ + ++ F NDY +VWF+
Sbjct: 447 KSLSDD----QTFVKIEDR---VSVPLILVCPAQEIQSLQKLFSNNDYFAFDSNKVWFLE 499
Query: 273 QEYLPCISKSSQNSKE-KILMGSQWEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQI 449
+E +P +S + + K KI+M S WEI ++PVGSG + LS+ N+ E L MG+ Y++I
Sbjct: 500 EEKIPVVSSTEEEGKRHKIMMKSPWEILQSPVGSGGVISLLSSVNIPENLSKMGVEYIEI 559
Query: 450 CSLNCSTRIADPSFIAFVNKKAAEVGVKLVTGRVHGISEETTSGYKDAFP------YALY 611
CS + + P + FV + AE+G+K+V E T +++F +
Sbjct: 560 CSSSQNCVTGSPLLLGFVESRKAEIGIKIV---------EDTKDLEESFDMIFSLNFMRL 610
Query: 612 LKEKESPMELGEIKENNRQNTLLVHRDDNGSACFDMIFTLQYAWRXXXXXXXXXXXXXXX 791
L ++ ++ I + N +H + G D++
Sbjct: 611 LAQQIHKLQFYAIPKPN------LHVEMVGKEWVDVV----------------------- 641
Query: 792 HVSDNTETSNSQNAYQLQSSIYSLLKFSPSDRIALL 899
+S N+Y+L+SSIYS L P ++I ++
Sbjct: 642 --------PSSPNSYELRSSIYSSLNACPLEKICVM 669
>ref|XP_004293660.1| PREDICTED: uncharacterized protein LOC101308845 [Fragaria vesca
subsp. vesca]
Length = 654
Score = 100 bits (248), Expect = 1e-18
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 4/203 (1%)
Frame = +3
Query: 75 DWQTSLKSCSDQLLSVQNLVNSDDASRVVSIPLIIHVTEEMQSDVESYFKENDYNGLREE 254
D + S+ S L Q V +D + S+PLI+ + + + +F ENDY G E
Sbjct: 418 DPENSMVSFQTLLCDDQRFVKMEDRA---SVPLILVCSAQKIDSLRMHFSENDYFGFDSE 474
Query: 255 QVWFMTQEYLPCISKSSQNSKE-KILMGSQWEISRAPVGSGSIPFSLSNQNMIERLKAMG 431
+V F +E LP +S S ++ K+ KILM S WEI ++PVGSG + LS+ N+ E L MG
Sbjct: 475 KVQFFEEEKLPVVSSSVEDEKKHKILMKSPWEILQSPVGSGGVFSLLSSNNVPENLSEMG 534
Query: 432 INYLQICSLNCSTRIADPSFIAFVNKKAAEVGVKLVTGRVHGISEETTSGYKDAFPYAL- 608
+ Y++ICS + + + FVN A++G+++ + T+ Y+++F
Sbjct: 535 VEYIEICSSHPRNISPNSLLLGFVNTSKADIGIQIF---------KDTNDYEESFNMIFT 585
Query: 609 --YLKEKESPMELGEIKENNRQN 671
Y+K+ ++ + +QN
Sbjct: 586 TDYMKKLTKQLDKLQFSATTKQN 608
>ref|XP_006467549.1| PREDICTED: uncharacterized protein LOC102610521 [Citrus sinensis]
Length = 668
Score = 97.4 bits (241), Expect = 8e-18
Identities = 53/154 (34%), Positives = 91/154 (59%), Gaps = 6/154 (3%)
Frame = +3
Query: 93 KSCSDQLLSVQNLVNSDDASRV-----VSIPLIIHVTEEMQSDVESYFKENDYNGLREEQ 257
+S +++ L++ + SDD V S+PL++ + +E F +ND+ ++
Sbjct: 430 ESTANKSLALLQTLLSDDQRFVKIENRASMPLVLVLPALEMQMLEKLFLDNDHFAFDSKK 489
Query: 258 VWFMTQEYLPCISKS-SQNSKEKILMGSQWEISRAPVGSGSIPFSLSNQNMIERLKAMGI 434
VWF+ +E LP +S+S ++ +K KILM S WEI +APVGSG + LS+ N+I+ L +G+
Sbjct: 490 VWFLEEEKLPIVSRSPTEQNKFKILMKSPWEILQAPVGSGGVFSLLSSHNIIKNLDELGV 549
Query: 435 NYLQICSLNCSTRIADPSFIAFVNKKAAEVGVKL 536
Y+QIC+ N I + F+ FV A++G ++
Sbjct: 550 EYIQICTANPRNAIGNSMFLGFVKSCGADIGFQI 583
>ref|XP_006449610.1| hypothetical protein CICLE_v10014510mg [Citrus clementina]
gi|557552221|gb|ESR62850.1| hypothetical protein
CICLE_v10014510mg [Citrus clementina]
Length = 668
Score = 95.5 bits (236), Expect = 3e-17
Identities = 47/126 (37%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Frame = +3
Query: 162 SIPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMTQEYLPCISKS-SQNSKEKILMGS 338
S+PL++ + +E F +ND+ ++VWF+ +E LP +S+S ++ +K KILM S
Sbjct: 458 SMPLVLVLPALEMQMLEKLFLDNDHFAFDSKKVWFLEEEKLPIVSRSPTEQNKFKILMKS 517
Query: 339 QWEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQICSLNCSTRIADPSFIAFVNKKAA 518
WEI +APVGSG + LS+ N+I+ L +G+ Y+QIC+ N I + F+ FV A
Sbjct: 518 PWEILQAPVGSGGVFSLLSSHNIIKNLDELGVEYIQICTANPRNAIGNSMFLGFVKSCGA 577
Query: 519 EVGVKL 536
++G ++
Sbjct: 578 DIGFQI 583
>gb|EMT02323.1| Ribosome maturation factor rimM [Aegilops tauschii]
Length = 653
Score = 95.5 bits (236), Expect = 3e-17
Identities = 51/142 (35%), Positives = 78/142 (54%)
Frame = +3
Query: 159 VSIPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMTQEYLPCISKSSQNSKEKILMGS 338
+S P +I + V +Y ENDY G ++VW + + LP +S SS+ +KIL+ S
Sbjct: 443 ISPPFVIISPDNHVDSVRNYLVENDYFGFDTQKVWVLEEMKLPVVSLSSELESKKILLKS 502
Query: 339 QWEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQICSLNCSTRIADPSFIAFVNKKAA 518
WEI + P G+G+I SLS+ ++E AMGI Y+QICSL+ + P + +
Sbjct: 503 PWEILQRPAGTGAIFSSLSSNKILESFNAMGIEYVQICSLSDELVLGHPLLFGAASSRGV 562
Query: 519 EVGVKLVTGRVHGISEETTSGY 584
+VGVKL S++T G+
Sbjct: 563 DVGVKL-----RKTSDKTEDGF 579
>ref|XP_001754433.1| predicted protein [Physcomitrella patens]
gi|162694535|gb|EDQ80883.1| predicted protein
[Physcomitrella patens]
Length = 501
Score = 94.4 bits (233), Expect = 7e-17
Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Frame = +3
Query: 102 SDQLLSVQNL---VNSDDASRVVSIPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMT 272
+++LL V+ L V D R IP ++ ++ ++F+E ++ GL + QVWF+
Sbjct: 155 AERLLLVEELAAFVTDDTIKR--RIPWLVMTSDATDLATRTFFEEKNFFGLEKSQVWFLK 212
Query: 273 QEYLPCISKSSQNSKEKILMGSQWEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQIC 452
Q LPC+ ++ +LM + W+++ AP G+G++ L I++L + G+ Y+Q+
Sbjct: 213 QSSLPCVDLDEGHA---MLMEAPWKVAMAPAGNGALFSDLRTAGFIKKLSSQGVKYVQVY 269
Query: 453 SL-NCSTRIADPSFIAFVNKKAAEVGVKLVTGRVHG--------ISEETTSGYKDAFPYA 605
++ N R+ADP F F++++ AEVGVK+V+ ++H + +E S K Y
Sbjct: 270 AVDNALVRVADPVFYGFIHRRQAEVGVKVVS-KIHAKESVGVVCLHQEGASNLK-CERYG 327
Query: 606 LYLKEKESPMELGEIKENNRQ 668
+ L+ E P L K+N+ Q
Sbjct: 328 V-LEYSEMPESLTTAKDNSGQ 347
>ref|XP_004147429.1| PREDICTED: uncharacterized protein LOC101214658 [Cucumis sativus]
Length = 846
Score = 92.8 bits (229), Expect = 2e-16
Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Frame = +3
Query: 87 SLKSCSDQLLS--VQNLVNSDDASRVVSIPLIIHVTEEMQSDVESYFKENDYNGLREEQV 260
SL+ C + L + NL + +PLI+ + +E F +NDY E++
Sbjct: 610 SLRICEEIWLQKVLSNLHQDYEIEDRPYVPLILVCSASTIHSIEKLFVDNDYFAFDSEKI 669
Query: 261 WFMTQEYLPCISKS-SQNSKEKILMGSQWEISRAPVGSGSIPFSLSNQNMIERLKAMGIN 437
WF+ +E LP +S + SK KILM S WEI ++PVGSG + LS+ N++ERL +G+
Sbjct: 670 WFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPNILERLTELGME 729
Query: 438 YLQICSLNCSTRIADPSFIAFVNKKAAEVGVKLVTG 545
Y++ICS N + + + + +A VG++L G
Sbjct: 730 YVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKG 765
>ref|XP_004161149.1| PREDICTED: uncharacterized LOC101214658 [Cucumis sativus]
Length = 1138
Score = 92.0 bits (227), Expect = 3e-16
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
Frame = +3
Query: 165 IPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMTQEYLPCISKS-SQNSKEKILMGSQ 341
+PLI+ + +E F +NDY E++WF+ +E LP +S + SK KILM S
Sbjct: 930 VPLILVCSASTIHSIEKLFVDNDYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSP 989
Query: 342 WEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQICSLNCSTRIADPSFIAFVNKKAAE 521
WEI ++PVGSG + LS+ N++ERL +G+ Y++ICS N + + + + +A
Sbjct: 990 WEILQSPVGSGGVINLLSSPNILERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSAN 1049
Query: 522 VGVKLVTG 545
VG++L G
Sbjct: 1050 VGIQLHKG 1057
>ref|XP_003567886.1| PREDICTED: uncharacterized protein LOC100844980 [Brachypodium
distachyon]
Length = 661
Score = 92.0 bits (227), Expect = 3e-16
Identities = 54/157 (34%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Frame = +3
Query: 96 SCSDQ----------LLSVQNLVNSDDASRVVSIPLIIHVTEEMQSDVESYFKENDYNGL 245
SCSD L S L+ D+ +S P II + V +Y ENDY G
Sbjct: 422 SCSDSDVLDAEFRKLLSSFSELMKVDENH--LSPPFIIVSPADHVDSVRNYLVENDYFGF 479
Query: 246 REEQVWFMTQEYLPCISKSSQNSKEKILMGSQWEISRAPVGSGSIPFSLSNQNMIERLKA 425
++VW + + LP + SS+ +KIL+ S WEI + P G+G+I SLS+ +++ L
Sbjct: 480 DTQKVWVLEEMKLPVVGLSSELKSKKILLKSPWEILQRPAGTGAIFSSLSSNKILDALNT 539
Query: 426 MGINYLQICSLNCSTRIADPSFIAFVNKKAAEVGVKL 536
MGI Y+QICSL+ + P + + +VG+KL
Sbjct: 540 MGIEYVQICSLSGGLVLGHPLLFGTASSRGVDVGIKL 576
>ref|XP_002519751.1| conserved hypothetical protein [Ricinus communis]
gi|223541168|gb|EEF42724.1| conserved hypothetical
protein [Ricinus communis]
Length = 631
Score = 92.0 bits (227), Expect = 3e-16
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 3/285 (1%)
Frame = +3
Query: 54 VDNKKTLDWQTSL--KSCSDQLLSVQNLVNSDDASRVVSIPLIIHVTEEMQSDVESYFKE 227
VD K + D SL KS SD Q+ + +D + V PL++ + ++ F +
Sbjct: 390 VDTKNSEDLAFSLLQKSLSDD----QSFLKMEDRAFV---PLVLVCPMQEIRSLKKLFSD 442
Query: 228 NDYNGLREEQVWFMTQEYLPCISKSSQN-SKEKILMGSQWEISRAPVGSGSIPFSLSNQN 404
NDY G ++VWF+ +E LP ++ S + S+ KILM S WEI + PVGSG + LS
Sbjct: 443 NDYFGFDTDKVWFLEEEKLPVVNSSYEEPSRCKILMKSPWEILQVPVGSGGVISLLSTHG 502
Query: 405 MIERLKAMGINYLQICSLNCSTRIADPSFIAFVNKKAAEVGVKLVTGRVHGISEETTSGY 584
+ E L M + Y+++CS+ + + + + +VN AE+G+++ E T G
Sbjct: 503 IPEILNKMDVKYIEVCSVGQNNVLGNALLLGYVNSCKAEIGLQIF---------EDTEGS 553
Query: 585 KDAFPYALYLKEKESPMELGEIKENNRQNTLLVHRDDNGSACFDMIFTLQYAWRXXXXXX 764
+++F S M+ + + L H ++ +++ W
Sbjct: 554 EESFDMIF----SNSSMK----RLTEEMDKLQFHTISKPNSYVELV---DKEWTDI---- 598
Query: 765 XXXXXXXXXHVSDNTETSNSQNAYQLQSSIYSLLKFSPSDRIALL 899
+S N+YQ SSIYS L P D+I ++
Sbjct: 599 ----------------IPSSPNSYQFYSSIYSALNGCPLDKICVI 627
>ref|XP_006281678.1| hypothetical protein CARUB_v10027818mg [Capsella rubella]
gi|482550382|gb|EOA14576.1| hypothetical protein
CARUB_v10027818mg [Capsella rubella]
Length = 653
Score = 91.7 bits (226), Expect = 4e-16
Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Frame = +3
Query: 123 QNLVNSDDASRVVSIPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMTQEYLPCI-SK 299
Q + +D + +PL+I +E ++ F++ND+ G E++WF+ +E LP + S
Sbjct: 433 QKFIKEEDRA---CVPLVIVSSEHTMETLQKLFQDNDHFGFESEKIWFLKEETLPVVCSL 489
Query: 300 SSQNSKEKILMGSQWEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQICSLNCSTRIA 479
+ K KILM S WEI ++PVGSG + L++ + + L +GI+YLQ+ S+ + A
Sbjct: 490 PEEPKKHKILMKSPWEILKSPVGSGGVLSILASHGITDSLSTLGIDYLQVHSIEKKPKPA 549
Query: 480 ----DPSFIAFVNKKAAEVGVKLVTGRVHGISEETTSGYKDAFPYALYLKEKESPMELGE 647
+P + F + K AE+G++ VT + E T K +LK + +EL
Sbjct: 550 QLYINPMLVGFASAKGAEIGIQ-VTEESEVKNLEMTFSMK-------FLKRLKGKIELEA 601
Query: 648 IKENN 662
+ + N
Sbjct: 602 VMKMN 606
>gb|EOY27815.1| 16S rRNA processing protein RimM family, putative isoform 1
[Theobroma cacao]
Length = 665
Score = 90.9 bits (224), Expect = 8e-16
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Frame = +3
Query: 159 VSIPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMTQEYLPCISKSSQNSKEKILMGS 338
+S+PL++ + + +E F N+Y G E+VWF+ +E LP +S + ++ KILM S
Sbjct: 456 LSVPLVLICPADEINSMEKLFLSNNYFGFDPEKVWFLEEEKLPVVSSLLEQNRHKILMKS 515
Query: 339 QWEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQICSLNCSTRIADPS--FIAFVNKK 512
WEI ++PVGSG + LS+ ++ E L M + Y+Q+C R S + FVN K
Sbjct: 516 PWEILQSPVGSGGVISLLSSNDIAENLARMSVEYIQVCR---GERYISGSSLLLGFVNSK 572
Query: 513 AAEVGVKLVTGR 548
A++GV++ R
Sbjct: 573 EADIGVQVFKDR 584
>ref|XP_002440261.1| hypothetical protein SORBIDRAFT_09g028680 [Sorghum bicolor]
gi|241945546|gb|EES18691.1| hypothetical protein
SORBIDRAFT_09g028680 [Sorghum bicolor]
Length = 663
Score = 90.9 bits (224), Expect = 8e-16
Identities = 49/126 (38%), Positives = 70/126 (55%)
Frame = +3
Query: 159 VSIPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMTQEYLPCISKSSQNSKEKILMGS 338
VS P II V + ENDY GL E+VW + + LP +S SS+ +++K+LM S
Sbjct: 454 VSPPFIIVSPAGHVESVRNCLVENDYFGLDTEKVWVLEELELPVVSISSEGNRKKVLMKS 513
Query: 339 QWEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQICSLNCSTRIADPSFIAFVNKKAA 518
WEI + P GSG I L++ ++E L MG+ Y QICS + I P V + A
Sbjct: 514 PWEIIKRPAGSGGIFSLLASNKILETLNEMGVQYTQICSSSNKPLIGHPMLFGAVASRGA 573
Query: 519 EVGVKL 536
+VG++L
Sbjct: 574 DVGIQL 579
>ref|XP_004232981.1| PREDICTED: uncharacterized protein LOC101255162 [Solanum
lycopersicum]
Length = 659
Score = 90.1 bits (222), Expect = 1e-15
Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
Frame = +3
Query: 114 LSVQNLVNSDDASRVV------SIPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMTQ 275
L V+ L+N D+ R++ S+PLI+ E ++ F ++DY E+VWF+ +
Sbjct: 430 LHVKGLLN--DSHRLLKMEDRPSVPLIVVCPAESIEYLKQLFMDHDYFSFDSEKVWFLEE 487
Query: 276 EYLPCISKSSQN-SKEKILMGSQWEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQIC 452
E LP +S S + +K KILM S WEI + P GS I LS+QN++E L MG+ Y+Q+C
Sbjct: 488 EKLPVVSASQEEENKHKILMKSPWEILQRPAGSAGIVTVLSSQNLLEHLHVMGVEYIQVC 547
Query: 453 SLNCSTRIADPSFIAFVNKKAAEVGVKL 536
S N I + F + A G+++
Sbjct: 548 SGN-QEFINGEMLLGFTKSREANAGIQV 574
>ref|XP_006355633.1| PREDICTED: uncharacterized protein LOC102604214 [Solanum tuberosum]
Length = 645
Score = 89.4 bits (220), Expect = 2e-15
Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Frame = +3
Query: 162 SIPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMTQEYLPCISKSSQN-SKEKILMGS 338
S+PLI+ E ++ F ++DY E+VWF+ +E LP +S S + +K KILM S
Sbjct: 436 SVPLIVVCPAESIEYLKQLFMDHDYFSFDSEKVWFLEEEKLPVVSASQEEENKHKILMKS 495
Query: 339 QWEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQICSLNCSTRIADPSFIAFVNKKAA 518
WEI + P GS I LS+QN++E L MG+ Y+Q+CS N I + F + A
Sbjct: 496 PWEILQRPAGSAGIVTLLSSQNLLEHLHVMGVEYIQVCSGN-QEFINGEMLLGFTKSREA 554
Query: 519 EVGVKL 536
G+++
Sbjct: 555 NAGIQV 560
>ref|NP_568663.2| RimM-like 16S rRNA processing protein [Arabidopsis thaliana]
gi|10177579|dbj|BAB10810.1| unnamed protein product
[Arabidopsis thaliana] gi|332008000|gb|AED95383.1|
RimM-like 16S rRNA processing protein [Arabidopsis
thaliana]
Length = 653
Score = 89.0 bits (219), Expect = 3e-15
Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 5/143 (3%)
Frame = +3
Query: 123 QNLVNSDDASRVVSIPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMTQEYLPCISKS 302
Q + +D + +PL+I E ++ F++ND+ G E++W + +E LP + S
Sbjct: 433 QRFIKEEDRA---CVPLVIVSPEHTIEALQKLFQDNDHFGFESEKIWILKEETLPVVCSS 489
Query: 303 SQNSKE-KILMGSQWEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQICSLNC----S 467
+ K+ KILM S WEI +PVGSG + L++ + L +GINYLQ+ S+ S
Sbjct: 490 PEEPKKHKILMKSPWEILESPVGSGGVLSILASHGTTDSLSTLGINYLQVHSIETKPQPS 549
Query: 468 TRIADPSFIAFVNKKAAEVGVKL 536
+P + FV+ + AE+G+++
Sbjct: 550 QHYINPMLVGFVSARGAEIGIQV 572
>ref|XP_002865193.1| 16S rRNA processing protein RimM family [Arabidopsis lyrata subsp.
lyrata] gi|297311028|gb|EFH41452.1| 16S rRNA processing
protein RimM family [Arabidopsis lyrata subsp. lyrata]
Length = 654
Score = 89.0 bits (219), Expect = 3e-15
Identities = 45/143 (31%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Frame = +3
Query: 123 QNLVNSDDASRVVSIPLIIHVTEEMQSDVESYFKENDYNGLREEQVWFMTQEYLPCISKS 302
Q+ + +D + +PL+I E ++ F++ND+ G E++W + +E LP + S
Sbjct: 434 QSFIKEEDHA---CVPLVIVSPEHTVEALQKLFQDNDHFGFEAEKIWILKEETLPVVCSS 490
Query: 303 SQNSKE-KILMGSQWEISRAPVGSGSIPFSLSNQNMIERLKAMGINYLQICSLNC----S 467
+ K+ KILM S WEI ++PVGSG + L++ + + L ++GI+YLQ+ S+ S
Sbjct: 491 PEEPKKHKILMKSPWEILKSPVGSGGVLSILASHGITDSLSSLGIDYLQVHSIETKPQPS 550
Query: 468 TRIADPSFIAFVNKKAAEVGVKL 536
+P + F + K AE+G+++
Sbjct: 551 QHYINPMLVGFASAKGAEIGIQM 573