BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00009558
         (852 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synth...   216   6e-54
ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth...   216   6e-54
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth...   216   1e-53
gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus...   211   3e-52
ref|XP_002467892.1| hypothetical protein SORBIDRAFT_01g035980 [S...   208   2e-51
gb|EAZ26854.1| hypothetical protein OsJ_10771 [Oryza sativa Japo...   207   3e-51
ref|NP_001050056.1| Os03g0338600 [Oryza sativa Japonica Group] g...   207   3e-51
gb|ABF95839.1| tRNA pseudouridine synthase family protein, expre...   207   3e-51
ref|XP_006842427.1| hypothetical protein AMTR_s00077p00023510 [A...   206   1e-50
gb|ACF83058.1| unknown [Zea mays] gi|414866704|tpg|DAA45261.1| T...   206   1e-50
ref|NP_001132024.1| hypothetical protein [Zea mays] gi|194693226...   206   1e-50
ref|XP_004984444.1| PREDICTED: putative tRNA pseudouridine synth...   205   2e-50
ref|XP_006651355.1| PREDICTED: putative tRNA pseudouridine synth...   204   3e-50
gb|EMS58771.1| Putative tRNA pseudouridine synthase [Triticum ur...   202   1e-49
ref|XP_006575439.1| PREDICTED: putative tRNA pseudouridine synth...   202   2e-49
ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synth...   202   2e-49
gb|EMT32485.1| Putative tRNA pseudouridine synthase [Aegilops ta...   201   2e-49
ref|XP_003561660.1| PREDICTED: putative tRNA pseudouridine synth...   201   2e-49
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   201   2e-49
gb|AER92594.1| putative pseudouridine synthase family protein [L...   199   8e-49

>ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X2
           [Solanum tuberosum]
          Length = 423

 Score =  216 bits (551), Expect = 6e-54
 Identities = 114/261 (43%), Positives = 161/261 (61%), Gaps = 1/261 (0%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           RVFS+LP  + F A+++C +RKY+YL+PAE+IGI  +S   EIE  IA F DIL+SFEG 
Sbjct: 91  RVFSILPSKKRFDARRECNARKYSYLIPAEIIGIKNDSTSSEIEYHIANFNDILNSFEGE 150

Query: 182 HPFHNYTVRAQNRKSKLNTLFSRLKSHATEASHNETSKIKDDDELVEIDETREPGI-RVL 358
           HPFHNYT+R++ RK        + +S   +   +   +I   +E       +E G+  ++
Sbjct: 151 HPFHNYTIRSKYRKQSPARNLLKNESLLKKGRPSSEKEISGSEESDGEQNGKEKGVVTIV 210

Query: 359 EDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFRRILSF 538
           E +  + +            +        N   P+QARWLHEPD  DKLSSAHFRRI   
Sbjct: 211 EAENQNPEGNCNEKVSHSKDL--------NSVIPIQARWLHEPDARDKLSSAHFRRIFHC 262

Query: 539 TCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVL 718
            C  L+ +    Y+E+ + GESFM HQIRKM+GT+VA+ R +LP DI+++SL +FSRIVL
Sbjct: 263 HCGKLEKLLGMNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDILRMSLCKFSRIVL 322

Query: 719 PVAPSEVLILHSSQFSFTHDP 781
           P+APSEVL+L  + F+  + P
Sbjct: 323 PLAPSEVLVLKGNNFALRNHP 343


>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
           [Solanum tuberosum]
          Length = 487

 Score =  216 bits (551), Expect = 6e-54
 Identities = 114/261 (43%), Positives = 161/261 (61%), Gaps = 1/261 (0%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           RVFS+LP  + F A+++C +RKY+YL+PAE+IGI  +S   EIE  IA F DIL+SFEG 
Sbjct: 155 RVFSILPSKKRFDARRECNARKYSYLIPAEIIGIKNDSTSSEIEYHIANFNDILNSFEGE 214

Query: 182 HPFHNYTVRAQNRKSKLNTLFSRLKSHATEASHNETSKIKDDDELVEIDETREPGI-RVL 358
           HPFHNYT+R++ RK        + +S   +   +   +I   +E       +E G+  ++
Sbjct: 215 HPFHNYTIRSKYRKQSPARNLLKNESLLKKGRPSSEKEISGSEESDGEQNGKEKGVVTIV 274

Query: 359 EDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFRRILSF 538
           E +  + +            +        N   P+QARWLHEPD  DKLSSAHFRRI   
Sbjct: 275 EAENQNPEGNCNEKVSHSKDL--------NSVIPIQARWLHEPDARDKLSSAHFRRIFHC 326

Query: 539 TCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVL 718
            C  L+ +    Y+E+ + GESFM HQIRKM+GT+VA+ R +LP DI+++SL +FSRIVL
Sbjct: 327 HCGKLEKLLGMNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDILRMSLCKFSRIVL 386

Query: 719 PVAPSEVLILHSSQFSFTHDP 781
           P+APSEVL+L  + F+  + P
Sbjct: 387 PLAPSEVLVLKGNNFALRNHP 407


>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Solanum
           lycopersicum]
          Length = 496

 Score =  216 bits (549), Expect = 1e-53
 Identities = 113/261 (43%), Positives = 160/261 (61%), Gaps = 1/261 (0%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           RVFS+LP  + F A+++C +RKY+YL+PAE+IGI  +S   EIE  IA F DIL+SFEG 
Sbjct: 151 RVFSILPSKKRFDARRECNARKYSYLIPAEIIGIKNDSASSEIEYHIANFNDILNSFEGE 210

Query: 182 HPFHNYTVRAQNRKSKLNTLFSRLKSHATEASHNETSKIKDDDELVEIDETREPGI-RVL 358
           HPFHNYT+R++ RK        +  S   +   +   +I   +E+      +E G+  ++
Sbjct: 211 HPFHNYTIRSKYRKQSPARNLLKNDSLLKKGRPSSEEEISGSEEIDGEQNRKEQGVVTIV 270

Query: 359 EDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFRRILSF 538
           E +  + +            +        N   P+QARWLHEPD  DKLSSAHFRRI   
Sbjct: 271 EAENQNAEGNCNLKVSHSKDL--------NSVIPIQARWLHEPDARDKLSSAHFRRIFHC 322

Query: 539 TCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVL 718
            C  L+ +    Y+E+ + GESFM HQIRKM+GT+VA+ R +LP D +++SL +FSRIVL
Sbjct: 323 HCGKLEKLLGMNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDTLRMSLCKFSRIVL 382

Query: 719 PVAPSEVLILHSSQFSFTHDP 781
           P+APSEVL+L  + F+  + P
Sbjct: 383 PLAPSEVLVLKGNNFALRNHP 403


>gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus vulgaris]
          Length = 507

 Score =  211 bits (536), Expect = 3e-52
 Identities = 116/260 (44%), Positives = 157/260 (60%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           +V S+LP  + F  +K+C  RKY+YLLPAE+IGI  +S  +EI+  I++F DIL+ FEG 
Sbjct: 165 KVLSILPSQRSFDPRKECAWRKYSYLLPAEIIGIQSDSSNDEIDYHISEFHDILNVFEGE 224

Query: 182 HPFHNYTVRAQNRKSKLNTLFSRLKSHATEASHNETSKIKDDDELVEIDETREPGIRVLE 361
           HPFHNYT RA+ RK   N   S  KS      +    +  D++E  EIDE     I    
Sbjct: 225 HPFHNYTARAKYRKHFPNKQLSS-KSVERLPPYESECEYSDEEENFEIDEAFTENIEC-R 282

Query: 362 DDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFRRILSFT 541
                E +                +  ++     +ARWL+EPD  D+LS++HFR++   +
Sbjct: 283 SQKCSETHNFGKPVVGSSNKNGNRLPGQDSRLVARARWLYEPDEADRLSASHFRKVFQCS 342

Query: 542 CSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIVLP 721
           C  L++     YIE+ + GESFM HQIRKM+GT+VAV R VLP DIIKLSL+RFSRI+LP
Sbjct: 343 CGKLETSLGYNYIEISIQGESFMLHQIRKMVGTAVAVKRKVLPKDIIKLSLARFSRIILP 402

Query: 722 VAPSEVLILHSSQFSFTHDP 781
           +APSEVLIL  ++FS    P
Sbjct: 403 LAPSEVLILRGNRFSIRTRP 422


>ref|XP_002467892.1| hypothetical protein SORBIDRAFT_01g035980 [Sorghum bicolor]
           gi|241921746|gb|EER94890.1| hypothetical protein
           SORBIDRAFT_01g035980 [Sorghum bicolor]
          Length = 520

 Score =  208 bits (529), Expect = 2e-51
 Identities = 112/260 (43%), Positives = 159/260 (61%), Gaps = 6/260 (2%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           RVFS+LP  + F  +++C+ R+Y YLLPAEVIGI +   PEEI+  +++F  IL  FEG 
Sbjct: 182 RVFSILPAQRSFDVRRECLYREYFYLLPAEVIGIKDGYSPEEIQEHLSEFNSILKGFEGN 241

Query: 182 HPFHNYTVRAQNRK------SKLNTLFSRLKSHATEASHNETSKIKDDDELVEIDETREP 343
           HPFHNYT RA+ RK       +       LKS ++E    E+S +    E    D+  + 
Sbjct: 242 HPFHNYTARAKYRKVLAGRHPRAKGASLTLKSMSSEMGMAESSSL----ESTSSDDDEDL 297

Query: 344 GIRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFR 523
            I  ++  A +  +           +             +QARWLHEPD  D+L+++HFR
Sbjct: 298 NISSIDSGASENIFVNDILKFSESRV------------QIQARWLHEPDESDRLNASHFR 345

Query: 524 RILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRF 703
            I++ +C +LQ+    +++EL + G SFM HQIRKM+GT+VAV RG+LP DII+LSL++F
Sbjct: 346 DIITCSCGELQTSSGIQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKF 405

Query: 704 SRIVLPVAPSEVLILHSSQF 763
           SRIVLP+APSEVLIL  + F
Sbjct: 406 SRIVLPIAPSEVLILKDNSF 425


>gb|EAZ26854.1| hypothetical protein OsJ_10771 [Oryza sativa Japonica Group]
          Length = 516

 Score =  207 bits (528), Expect = 3e-51
 Identities = 114/260 (43%), Positives = 156/260 (60%), Gaps = 6/260 (2%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           RVFSVLP  + F  +++C+ R+Y YLLPAE+IGI      EE+   +++F  IL  FEG 
Sbjct: 177 RVFSVLPAQRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGN 236

Query: 182 HPFHNYTVRAQNRK------SKLNTLFSRLKSHATEASHNETSKIKDDDELVEIDETREP 343
           HPFHNYT RA+ RK       K+    S + S  TE S +++S   DD    + DE    
Sbjct: 237 HPFHNYTARAKYRKVLAGRHRKVKGASSAVNSMPTEMSLDQSSS--DDGTTSDHDEEDLN 294

Query: 344 GIRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFR 523
              ++     ++ Y            I             +ARWLHEPD +D+L+++HFR
Sbjct: 295 SSSIIGSSVPEDSYKDNPEFSEKQVQI-------------RARWLHEPDENDRLNASHFR 341

Query: 524 RILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRF 703
            IL+F+C +LQ     +++EL + G SFM HQIRKM+GTSVAV RG+LP DII LSL++F
Sbjct: 342 DILTFSCGELQISSGIQFVELTISGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKF 401

Query: 704 SRIVLPVAPSEVLILHSSQF 763
           SRIVLP+APSEVL+L  + F
Sbjct: 402 SRIVLPIAPSEVLVLRDNSF 421


>ref|NP_001050056.1| Os03g0338600 [Oryza sativa Japonica Group]
           gi|108708043|gb|ABF95838.1| tRNA pseudouridine synthase
           family protein, expressed [Oryza sativa Japonica Group]
           gi|113548527|dbj|BAF11970.1| Os03g0338600 [Oryza sativa
           Japonica Group]
          Length = 516

 Score =  207 bits (528), Expect = 3e-51
 Identities = 114/260 (43%), Positives = 156/260 (60%), Gaps = 6/260 (2%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           RVFSVLP  + F  +++C+ R+Y YLLPAE+IGI      EE+   +++F  IL  FEG 
Sbjct: 177 RVFSVLPAQRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGN 236

Query: 182 HPFHNYTVRAQNRK------SKLNTLFSRLKSHATEASHNETSKIKDDDELVEIDETREP 343
           HPFHNYT RA+ RK       K+    S + S  TE S +++S   DD    + DE    
Sbjct: 237 HPFHNYTARAKYRKVLAGRHRKVKGASSAVNSMPTEMSLDQSSS--DDGTTSDHDEEDLN 294

Query: 344 GIRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFR 523
              ++     ++ Y            I             +ARWLHEPD +D+L+++HFR
Sbjct: 295 SSSIIGSSVPEDSYKDNPEFSEKQVQI-------------RARWLHEPDENDRLNASHFR 341

Query: 524 RILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRF 703
            IL+F+C +LQ     +++EL + G SFM HQIRKM+GTSVAV RG+LP DII LSL++F
Sbjct: 342 DILTFSCGELQISSGIQFVELTISGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKF 401

Query: 704 SRIVLPVAPSEVLILHSSQF 763
           SRIVLP+APSEVL+L  + F
Sbjct: 402 SRIVLPIAPSEVLVLRDNSF 421


>gb|ABF95839.1| tRNA pseudouridine synthase family protein, expressed [Oryza sativa
           Japonica Group]
          Length = 374

 Score =  207 bits (528), Expect = 3e-51
 Identities = 114/260 (43%), Positives = 156/260 (60%), Gaps = 6/260 (2%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           RVFSVLP  + F  +++C+ R+Y YLLPAE+IGI      EE+   +++F  IL  FEG 
Sbjct: 35  RVFSVLPAQRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGN 94

Query: 182 HPFHNYTVRAQNRK------SKLNTLFSRLKSHATEASHNETSKIKDDDELVEIDETREP 343
           HPFHNYT RA+ RK       K+    S + S  TE S +++S   DD    + DE    
Sbjct: 95  HPFHNYTARAKYRKVLAGRHRKVKGASSAVNSMPTEMSLDQSSS--DDGTTSDHDEEDLN 152

Query: 344 GIRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFR 523
              ++     ++ Y            I             +ARWLHEPD +D+L+++HFR
Sbjct: 153 SSSIIGSSVPEDSYKDNPEFSEKQVQI-------------RARWLHEPDENDRLNASHFR 199

Query: 524 RILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRF 703
            IL+F+C +LQ     +++EL + G SFM HQIRKM+GTSVAV RG+LP DII LSL++F
Sbjct: 200 DILTFSCGELQISSGIQFVELTISGVSFMLHQIRKMVGTSVAVKRGLLPKDIIALSLAKF 259

Query: 704 SRIVLPVAPSEVLILHSSQF 763
           SRIVLP+APSEVL+L  + F
Sbjct: 260 SRIVLPIAPSEVLVLRDNSF 279


>ref|XP_006842427.1| hypothetical protein AMTR_s00077p00023510 [Amborella trichopoda]
           gi|548844513|gb|ERN04102.1| hypothetical protein
           AMTR_s00077p00023510 [Amborella trichopoda]
          Length = 336

 Score =  206 bits (523), Expect = 1e-50
 Identities = 110/263 (41%), Positives = 162/263 (61%), Gaps = 3/263 (1%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           +VF VLP  + F A+++CI+R Y+YLLPAE+IGI+    P EIE  + +F +IL +FEG 
Sbjct: 35  KVFGVLPSQRSFDARRECIARMYSYLLPAEIIGITNQCGPGEIERHLLEFNNILKTFEGD 94

Query: 182 HPFHNYTVRAQNRKSKLNTLFSRLKSHATEASHNETSKIKDDDELVEIDETREPGIRVLE 361
           HPFHNYT R++ R+        R    +  +    +SK K D E  + DE  E G    +
Sbjct: 95  HPFHNYTARSKYRR--------RHCGGSNFSKGTISSKEKSDAEDEQSDEEEESGRATTD 146

Query: 362 DDAIDE---DYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFRRIL 532
           ++  D+   DY                + ++  AP ++A+W+HEPD  D +S +HFR+I 
Sbjct: 147 NEQSDDKGLDYSEMPDNNFE-------LSNDVAAPRVRAKWVHEPDEKDLISGSHFRKIF 199

Query: 533 SFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRI 712
           SFTC  L++     ++E+ V GESFM HQIRKM+  ++AV R +LP D+I LSL++FSR+
Sbjct: 200 SFTCGKLETSNEMPFLEICVCGESFMLHQIRKMVAAAIAVKRALLPHDVIDLSLTKFSRM 259

Query: 713 VLPVAPSEVLILHSSQFSFTHDP 781
           VLP+APSEVLIL  +++S  + P
Sbjct: 260 VLPIAPSEVLILKGNKYSLRNLP 282


>gb|ACF83058.1| unknown [Zea mays] gi|414866704|tpg|DAA45261.1| TPA: hypothetical
           protein ZEAMMB73_241728 [Zea mays]
          Length = 516

 Score =  206 bits (523), Expect = 1e-50
 Identities = 111/260 (42%), Positives = 158/260 (60%), Gaps = 6/260 (2%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           RVFS+LP  + F  +++C+ R+Y YLLPAE+IGI ++   EE++  +++F  IL  FEG 
Sbjct: 182 RVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKDDYSSEEMQEHLSEFNKILKGFEGN 241

Query: 182 HPFHNYTVRAQNRK------SKLNTLFSRLKSHATEASHNETSKIKDDDELVEIDETREP 343
           HPFHNYT RA+ RK       +     S LKS +++    E+S     +E    D   + 
Sbjct: 242 HPFHNYTARAKYRKVLAGRHRRAKGASSALKSMSSDTGMAESSS----EESTSPDHDEDL 297

Query: 344 GIRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFR 523
            I  + D  I ED             +            +QARWLHEPD  D+L+++HFR
Sbjct: 298 NISSIFDSGIPEDTRVNGILKLSEDRLQ-----------IQARWLHEPDESDRLNASHFR 346

Query: 524 RILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRF 703
            I++ +C DLQ+    +++EL + G SFM HQIRKM+GT+V V RG+LP DII+LSL++F
Sbjct: 347 DIITCSCGDLQTSSGIQFVELTICGVSFMLHQIRKMVGTAVTVKRGLLPRDIIELSLAKF 406

Query: 704 SRIVLPVAPSEVLILHSSQF 763
           SRIVLP+APSEVL+L  + F
Sbjct: 407 SRIVLPIAPSEVLVLKDNSF 426


>ref|NP_001132024.1| hypothetical protein [Zea mays] gi|194693226|gb|ACF80697.1| unknown
           [Zea mays] gi|414866705|tpg|DAA45262.1| TPA:
           hypothetical protein ZEAMMB73_241728 [Zea mays]
          Length = 369

 Score =  206 bits (523), Expect = 1e-50
 Identities = 111/260 (42%), Positives = 158/260 (60%), Gaps = 6/260 (2%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           RVFS+LP  + F  +++C+ R+Y YLLPAE+IGI ++   EE++  +++F  IL  FEG 
Sbjct: 35  RVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKDDYSSEEMQEHLSEFNKILKGFEGN 94

Query: 182 HPFHNYTVRAQNRK------SKLNTLFSRLKSHATEASHNETSKIKDDDELVEIDETREP 343
           HPFHNYT RA+ RK       +     S LKS +++    E+S     +E    D   + 
Sbjct: 95  HPFHNYTARAKYRKVLAGRHRRAKGASSALKSMSSDTGMAESSS----EESTSPDHDEDL 150

Query: 344 GIRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFR 523
            I  + D  I ED             +            +QARWLHEPD  D+L+++HFR
Sbjct: 151 NISSIFDSGIPEDTRVNGILKLSEDRLQ-----------IQARWLHEPDESDRLNASHFR 199

Query: 524 RILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRF 703
            I++ +C DLQ+    +++EL + G SFM HQIRKM+GT+V V RG+LP DII+LSL++F
Sbjct: 200 DIITCSCGDLQTSSGIQFVELTICGVSFMLHQIRKMVGTAVTVKRGLLPRDIIELSLAKF 259

Query: 704 SRIVLPVAPSEVLILHSSQF 763
           SRIVLP+APSEVL+L  + F
Sbjct: 260 SRIVLPIAPSEVLVLKDNSF 279


>ref|XP_004984444.1| PREDICTED: putative tRNA pseudouridine synthase-like [Setaria
           italica]
          Length = 519

 Score =  205 bits (521), Expect = 2e-50
 Identities = 113/264 (42%), Positives = 163/264 (61%), Gaps = 10/264 (3%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           RVFS+LP  + F  +++C+ R+Y YLLPAE IGI +    EE++  +++F  IL  FEG 
Sbjct: 181 RVFSILPAQRSFDVRRECLYREYFYLLPAETIGIKDGCSSEEVQEHLSEFNSILKGFEGN 240

Query: 182 HPFHNYTVRAQNRK------SKLNTLFSRLKSHATEASHNETSKI----KDDDELVEIDE 331
           HPFHNYT RA+ RK       ++      LKS ++E    E S       D DE + I  
Sbjct: 241 HPFHNYTARAKYRKVLAGSHRRVKGACLPLKSMSSETGMEENSSEDNTPSDHDEDLNISS 300

Query: 332 TREPGIRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSS 511
             + G+   ED+ +++              +    G++     +QARWL+EPD  D+L++
Sbjct: 301 MIDSGV---EDNCLND--------------VAKHFGNQ---VQIQARWLYEPDESDRLNA 340

Query: 512 AHFRRILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLS 691
           +HFR I++ +C +LQS    +++EL + G SFM HQIRKM+GT+VAV RG+LP DII+LS
Sbjct: 341 SHFRDIITCSCGELQSSSGIQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELS 400

Query: 692 LSRFSRIVLPVAPSEVLILHSSQF 763
           L++FSRIVLP+APSEVLIL  + F
Sbjct: 401 LAKFSRIVLPIAPSEVLILRDNSF 424


>ref|XP_006651355.1| PREDICTED: putative tRNA pseudouridine synthase-like [Oryza
           brachyantha]
          Length = 518

 Score =  204 bits (519), Expect = 3e-50
 Identities = 112/260 (43%), Positives = 155/260 (59%), Gaps = 6/260 (2%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           RVFS+LP  + F  +K+C+ R Y YL+PAE+IGI +    +E+   +++F  IL  FEG 
Sbjct: 179 RVFSILPAQRSFDVRKECLYRDYLYLIPAEIIGIKDGCSSDEVVEHLSEFNYILKGFEGN 238

Query: 182 HPFHNYTVRAQNRKSKLNTLFSRLKSHATEASHNETSKI------KDDDELVEIDETREP 343
           HPFHNYT RA+ RK        R    A+ A ++ +SK+       DD    + DE    
Sbjct: 239 HPFHNYTARAKYRKVLAGR--HRKVKRASSAVNSMSSKMGMEGISSDDGTSSDHDEEDLN 296

Query: 344 GIRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFR 523
              ++   A +  Y            I             +ARWLHEPD +D+L+++HFR
Sbjct: 297 SSSLIGSSAPENSYKDSPELSKKQVQI-------------RARWLHEPDENDRLNASHFR 343

Query: 524 RILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRF 703
            IL+F+C +LQS    +++EL + G SFM HQIRKM+GT+VAV RG+LP DII LSL++F
Sbjct: 344 DILTFSCGELQSSSGMQFVELTISGVSFMLHQIRKMVGTAVAVKRGLLPKDIIALSLAKF 403

Query: 704 SRIVLPVAPSEVLILHSSQF 763
           SRIVLP+APSEVLIL  + F
Sbjct: 404 SRIVLPIAPSEVLILRDNSF 423


>gb|EMS58771.1| Putative tRNA pseudouridine synthase [Triticum urartu]
          Length = 450

 Score =  202 bits (515), Expect = 1e-49
 Identities = 111/259 (42%), Positives = 158/259 (61%), Gaps = 5/259 (1%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           +VFS+LP  + F  +++C+ R+Y YLLPAE+IGI  +    E+E  + +F +IL  FEG 
Sbjct: 110 KVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKSSCSSGEVEEHLIEFNNILKCFEGN 169

Query: 182 HPFHNYTVRAQNRKSKLNTLFSRLKSHATEASHNETSKIKD-----DDELVEIDETREPG 346
           HPFHNYT RA+ RK  L     R K  +T A    +  + D     D    +IDE     
Sbjct: 170 HPFHNYTARAKYRKV-LAGAHRRAKETSTTAHSIPSEMVADKSTSGDGTTSDIDEEYLNS 228

Query: 347 IRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFRR 526
             +L+  A +++            +             +QARWLHEP+ +D+LS++HFR 
Sbjct: 229 PSILDSSAPEDNCNMDNPELPESHV------------QIQARWLHEPNDNDRLSASHFRD 276

Query: 527 ILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFS 706
           IL+ +C +L+S    +++EL + G SFM HQIRKM+GT+VAV RG+LP DII+LSL++FS
Sbjct: 277 ILTCSCRELRSSSGVQFVELTICGASFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFS 336

Query: 707 RIVLPVAPSEVLILHSSQF 763
           RIVLP+APSEVLIL  + F
Sbjct: 337 RIVLPIAPSEVLILRDNSF 355


>ref|XP_006575439.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X5
           [Glycine max]
          Length = 403

 Score =  202 bits (513), Expect = 2e-49
 Identities = 112/262 (42%), Positives = 156/262 (59%), Gaps = 2/262 (0%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           +V S+LP  + F  +K+CI RKY+YLLPAE+IGI ++   +E++  I++F DIL+ FEG 
Sbjct: 60  KVISILPSQRSFDPRKECILRKYSYLLPAEIIGI-QSHFSDEVDYHISEFNDILNVFEGI 118

Query: 182 HPFHNYTVRAQNRKSKLNTLFSRLK--SHATEASHNETSKIKDDDELVEIDETREPGIRV 355
           HPFHNYT R++ RK   N   S     S     S+    +  D +E  E DE     I V
Sbjct: 119 HPFHNYTARSKYRKQFPNRQSSSKSGTSARESLSYESECEYSDGEENSETDEAYTENI-V 177

Query: 356 LEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFRRILS 535
            +     E +                +  ++     +ARWL+EPD  D+LS++HFR++  
Sbjct: 178 CQSQKFSETHHFAEPVVGSSNKNGNGLHDQDSRLVARARWLYEPDEADRLSASHFRKVFQ 237

Query: 536 FTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIV 715
            +C  L++     YIE+ + GESFM HQIRKM+GT+VAV R  LP DIIKLSL+RFSRI+
Sbjct: 238 CSCGKLETSLGYNYIEISIQGESFMLHQIRKMVGTAVAVKRKALPKDIIKLSLTRFSRII 297

Query: 716 LPVAPSEVLILHSSQFSFTHDP 781
           LP+APSE LIL  ++FS    P
Sbjct: 298 LPLAPSEALILRGNRFSIRTRP 319


>ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
           [Glycine max] gi|571441413|ref|XP_006575436.1|
           PREDICTED: putative tRNA pseudouridine synthase-like
           isoform X2 [Glycine max]
           gi|571441415|ref|XP_006575437.1| PREDICTED: putative
           tRNA pseudouridine synthase-like isoform X3 [Glycine
           max] gi|571441417|ref|XP_006575438.1| PREDICTED:
           putative tRNA pseudouridine synthase-like isoform X4
           [Glycine max]
          Length = 493

 Score =  202 bits (513), Expect = 2e-49
 Identities = 112/262 (42%), Positives = 156/262 (59%), Gaps = 2/262 (0%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           +V S+LP  + F  +K+CI RKY+YLLPAE+IGI ++   +E++  I++F DIL+ FEG 
Sbjct: 150 KVISILPSQRSFDPRKECILRKYSYLLPAEIIGI-QSHFSDEVDYHISEFNDILNVFEGI 208

Query: 182 HPFHNYTVRAQNRKSKLNTLFSRLK--SHATEASHNETSKIKDDDELVEIDETREPGIRV 355
           HPFHNYT R++ RK   N   S     S     S+    +  D +E  E DE     I V
Sbjct: 209 HPFHNYTARSKYRKQFPNRQSSSKSGTSARESLSYESECEYSDGEENSETDEAYTENI-V 267

Query: 356 LEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFRRILS 535
            +     E +                +  ++     +ARWL+EPD  D+LS++HFR++  
Sbjct: 268 CQSQKFSETHHFAEPVVGSSNKNGNGLHDQDSRLVARARWLYEPDEADRLSASHFRKVFQ 327

Query: 536 FTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFSRIV 715
            +C  L++     YIE+ + GESFM HQIRKM+GT+VAV R  LP DIIKLSL+RFSRI+
Sbjct: 328 CSCGKLETSLGYNYIEISIQGESFMLHQIRKMVGTAVAVKRKALPKDIIKLSLTRFSRII 387

Query: 716 LPVAPSEVLILHSSQFSFTHDP 781
           LP+APSE LIL  ++FS    P
Sbjct: 388 LPLAPSEALILRGNRFSIRTRP 409


>gb|EMT32485.1| Putative tRNA pseudouridine synthase [Aegilops tauschii]
          Length = 429

 Score =  201 bits (512), Expect = 2e-49
 Identities = 110/259 (42%), Positives = 157/259 (60%), Gaps = 5/259 (1%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           +VFS+LP  + F  +++C+ R+Y YLLPAE+IGI  +    E+E  + +F +IL  FEG 
Sbjct: 89  KVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKSSCSSGEVEEHLIEFNNILKGFEGN 148

Query: 182 HPFHNYTVRAQNRKSKLNTLFSRLKSHATEASHNETSKIKD-----DDELVEIDETREPG 346
           HPFHNYT RA+ RK  L     R K  +T A       + D     D    +IDE     
Sbjct: 149 HPFHNYTARAKYRKV-LAGAHRRAKETSTTAHSIPFEMVADQSTSGDGTTSDIDEEYLNS 207

Query: 347 IRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHDKLSSAHFRR 526
             +L+  A +++            +             +QARWLHEP+ +D+LS++HFR 
Sbjct: 208 PSILDSSAPEDNCKMDNPELPESRV------------QIQARWLHEPNDNDRLSASHFRD 255

Query: 527 ILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLSRFS 706
           IL+ +C +L+S    +++EL + G SFM HQIRKM+GT+VAV RG+LP DII+LSL++FS
Sbjct: 256 ILTCSCGELRSSSGVQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIQLSLAKFS 315

Query: 707 RIVLPVAPSEVLILHSSQF 763
           R+VLP+APSEVLIL  + F
Sbjct: 316 RVVLPIAPSEVLILRDNSF 334


>ref|XP_003561660.1| PREDICTED: putative tRNA pseudouridine synthase-like [Brachypodium
           distachyon]
          Length = 522

 Score =  201 bits (512), Expect = 2e-49
 Identities = 112/268 (41%), Positives = 159/268 (59%), Gaps = 14/268 (5%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           +VFS+LP  + F  +++C+ R+Y YLLPAE+IGI      EE+E  + +F  IL  FEG 
Sbjct: 182 KVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKSGCSSEEVEEHLIEFNSILKGFEGN 241

Query: 182 HPFHNYTVRAQNRK-------------SKLNTLFSRLKSHATEASHNETSKIKD-DDELV 319
           HPFHNYT RA+ RK             S +N++ S L   A + S N+     D DDE +
Sbjct: 242 HPFHNYTARAKYRKVLAGAHRRSKETSSTINSIPSEL---AVDQSPNDDGATSDADDEHL 298

Query: 320 EIDETREPGIRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENIAPPLQARWLHEPDRHD 499
                      V++    + D+           +             +QARWLHEP+ +D
Sbjct: 299 NFSS-------VVDSSLPENDWNKDNPKHHENHV------------QIQARWLHEPNEND 339

Query: 500 KLSSAHFRRILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDI 679
           +LS++HFR I++ +C +LQS    +++EL + G SFM HQIRKM+GT+VAV RG+LP +I
Sbjct: 340 RLSASHFRDIITCSCGELQSSSGIQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKEI 399

Query: 680 IKLSLSRFSRIVLPVAPSEVLILHSSQF 763
           I+LSL++FSRIVLP+APSEVLIL  + F
Sbjct: 400 IELSLAKFSRIVLPIAPSEVLILRDNSF 427


>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
           vinifera]
          Length = 564

 Score =  201 bits (512), Expect = 2e-49
 Identities = 121/282 (42%), Positives = 167/282 (59%), Gaps = 17/282 (6%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           +VFS+LP  + F A+++C  R+Y+YLLPAE+IGI  NS   EI++ IA+F DIL++FEG 
Sbjct: 168 KVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGE 227

Query: 182 HPFHNYTVRAQNRKS-------KLNTLFSRLKSHATEASHNETSKIKDDDELVEIDETRE 340
           HPF NYT+R++ RK            +F R KS   EAS +E  ++ D +E         
Sbjct: 228 HPFQNYTIRSKYRKQFPAKQSPGNGGVFRRAKSSG-EASTSEF-EVSDGEE--------N 277

Query: 341 PGIRVLEDDAIDEDYXXXXXXXXXXXIIPTTVGSENI--------APPL--QARWLHEPD 490
            GI  +     DE              +   VGS N         +P L  +ARWLH PD
Sbjct: 278 SGINGVISSDYDEG--ENQNSSESTSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPD 335

Query: 491 RHDKLSSAHFRRILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLP 670
             D++S++HFR+I + +C  L+      Y+EL + GESFM HQIRKM+GT++AV R +LP
Sbjct: 336 ERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLP 395

Query: 671 PDIIKLSLSRFSRIVLPVAPSEVLILHSSQFSFTHDPWRDER 796
            DI+ LSL++FSRIVLP+APSEVLIL  + FS    P   +R
Sbjct: 396 RDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKR 437


>gb|AER92594.1| putative pseudouridine synthase family protein [Linum
           usitatissimum]
          Length = 565

 Score =  199 bits (507), Expect = 8e-49
 Identities = 109/265 (41%), Positives = 156/265 (58%), Gaps = 8/265 (3%)
 Frame = +2

Query: 2   RVFSVLPISQGFHAKKDCISRKYTYLLPAEVIGISENSLPEEIENCIAKFRDILSSFEGR 181
           R+FS+LP  + F  + +C  RKY+YLLPAE+IGI  +S  +EI   I+ FR IL++FEG 
Sbjct: 220 RIFSILPAQKNFDPRLECNMRKYSYLLPAEIIGIRSHSDADEISEHISDFRKILNAFEGD 279

Query: 182 HPFHNYTVRAQNRKSKLNTLFSRLKSHATEASHNETSKIKDDDELVEIDETREPGIRVLE 361
           HPFHNYT+R++ R       F     H +          K D   ++I +    G    E
Sbjct: 280 HPFHNYTIRSKYRSQIRRNTFPEKNYHFS----------KRDRAFIQIGDPVSEGSD--E 327

Query: 362 DDAIDEDYXXXXXXXXXXXIIPTTVGSENIAP--------PLQARWLHEPDRHDKLSSAH 517
           ++ +DE             I+     ++NI P         L ARWL EPD  D++ ++H
Sbjct: 328 EEGVDE-------------IVQLDNSNQNIEPVKDHQSSGQLVARWLXEPDERDRIGASH 374

Query: 518 FRRILSFTCSDLQSIKNQRYIELMVHGESFMYHQIRKMIGTSVAVIRGVLPPDIIKLSLS 697
           FR+I+  +C +L+      ++E+ + GESFM HQIRKM+GT+VAV R +LP DI+ LSL+
Sbjct: 375 FRKIIRCSCGELEKSSGYNFVEISIWGESFMLHQIRKMVGTAVAVKRDLLPRDILTLSLA 434

Query: 698 RFSRIVLPVAPSEVLILHSSQFSFT 772
           +FSRIVLP+APSEVLIL  + +S T
Sbjct: 435 KFSRIVLPLAPSEVLILRGNSYSLT 459