BLASTX nr result
ID: Ephedra26_contig00009507
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00009507
(420 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY18544.1| Ribosomal protein S12/S23 family protein isoform ... 83 3e-14
gb|EOY07754.1| Ribosomal protein S12/S23 family protein [Theobro... 83 3e-14
emb|CBI32689.3| unnamed protein product [Vitis vinifera] 82 6e-14
ref|XP_002279025.1| PREDICTED: 40S ribosomal protein S23-like [V... 82 6e-14
ref|XP_002968022.1| hypothetical protein SELMODRAFT_145246 [Sela... 82 7e-14
gb|ABR16208.1| unknown [Picea sitchensis] gi|148906586|gb|ABR164... 82 7e-14
emb|CBI16256.3| unnamed protein product [Vitis vinifera] 82 1e-13
emb|CBI31516.3| unnamed protein product [Vitis vinifera] 81 1e-13
ref|XP_002326333.1| predicted protein [Populus trichocarpa] gi|2... 81 1e-13
tpg|DAA56964.1| TPA: hypothetical protein ZEAMMB73_934848, parti... 81 2e-13
gb|EAZ14059.1| hypothetical protein OsJ_03983 [Oryza sativa Japo... 81 2e-13
ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [C... 80 2e-13
ref|XP_001763475.1| predicted protein [Physcomitrella patens] gi... 80 4e-13
gb|EMJ19697.1| hypothetical protein PRUPE_ppa012246mg [Prunus pe... 79 5e-13
gb|EMJ07313.1| hypothetical protein PRUPE_ppa013051mg [Prunus pe... 79 5e-13
ref|NP_001274976.1| uncharacterized protein LOC102577739 [Solanu... 79 5e-13
ref|XP_002284863.1| PREDICTED: 40S ribosomal protein S23-like [V... 79 5e-13
gb|ESW16525.1| hypothetical protein PHAVU_007G163700g [Phaseolus... 79 6e-13
ref|NP_001044720.1| Os01g0834500 [Oryza sativa Japonica Group] g... 78 1e-12
gb|EMS46402.1| 40S ribosomal protein S23 [Triticum urartu] 78 1e-12
>gb|EOY18544.1| Ribosomal protein S12/S23 family protein isoform 2, partial
[Theobroma cacao]
Length = 116
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/40 (92%), Positives = 37/40 (92%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGAGRKLR HRRRQ WADKAYKK NLGNEWKKPF
Sbjct: 1 MGKTRGMGAGRKLRTHRRRQRWADKAYKKSNLGNEWKKPF 40
>gb|EOY07754.1| Ribosomal protein S12/S23 family protein [Theobroma cacao]
gi|508726646|gb|EOY18543.1| Ribosomal protein S12/S23
family protein isoform 1 [Theobroma cacao]
Length = 142
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/40 (92%), Positives = 37/40 (92%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGAGRKLR HRRRQ WADKAYKK NLGNEWKKPF
Sbjct: 1 MGKTRGMGAGRKLRTHRRRQRWADKAYKKSNLGNEWKKPF 40
>emb|CBI32689.3| unnamed protein product [Vitis vinifera]
Length = 189
Score = 82.4 bits (202), Expect = 6e-14
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGAGRKL+ HRRRQ WADKAYKK NLGNEWKKPF
Sbjct: 48 MGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPF 87
>ref|XP_002279025.1| PREDICTED: 40S ribosomal protein S23-like [Vitis vinifera]
Length = 142
Score = 82.4 bits (202), Expect = 6e-14
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGAGRKL+ HRRRQ WADKAYKK NLGNEWKKPF
Sbjct: 1 MGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPF 40
>ref|XP_002968022.1| hypothetical protein SELMODRAFT_145246 [Selaginella moellendorffii]
gi|302821523|ref|XP_002992424.1| hypothetical protein
SELMODRAFT_162320 [Selaginella moellendorffii]
gi|300139840|gb|EFJ06574.1| hypothetical protein
SELMODRAFT_162320 [Selaginella moellendorffii]
gi|300164760|gb|EFJ31369.1| hypothetical protein
SELMODRAFT_145246 [Selaginella moellendorffii]
Length = 142
Score = 82.0 bits (201), Expect = 7e-14
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRG GAGRKL++HRR QLWADK+YKKRNLGNEWKKPF
Sbjct: 1 MGKTRGQGAGRKLKNHRRAQLWADKSYKKRNLGNEWKKPF 40
>gb|ABR16208.1| unknown [Picea sitchensis] gi|148906586|gb|ABR16445.1| unknown
[Picea sitchensis] gi|148908713|gb|ABR17464.1| unknown
[Picea sitchensis] gi|224284812|gb|ACN40136.1| unknown
[Picea sitchensis]
Length = 142
Score = 82.0 bits (201), Expect = 7e-14
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGAGRKLR+HRR+QLWADK+YKK +LGNEWKKPF
Sbjct: 1 MGKTRGMGAGRKLRNHRRKQLWADKSYKKSHLGNEWKKPF 40
>emb|CBI16256.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 81.6 bits (200), Expect = 1e-13
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +2
Query: 296 NMGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
NMGKTRGMGAGRKL+ HR RQ WADKAYKK NLGNEWKKPF
Sbjct: 33 NMGKTRGMGAGRKLKSHRIRQRWADKAYKKSNLGNEWKKPF 73
>emb|CBI31516.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/54 (75%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 SESV*SFDS-YSHNMGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
+ESV S +S S MGKTRGMGAGRKL+ HR RQ WADKAYKK NLGNEWKKPF
Sbjct: 43 TESVSSAESRLSAAMGKTRGMGAGRKLKSHRIRQRWADKAYKKSNLGNEWKKPF 96
>ref|XP_002326333.1| predicted protein [Populus trichocarpa]
gi|224098071|ref|XP_002311115.1| putative 40S ribosomal
protein s12 [Populus trichocarpa]
gi|224112945|ref|XP_002316341.1| putative 40S ribosomal
protein s12 [Populus trichocarpa]
gi|224140159|ref|XP_002323452.1| 40s ribosomal protein
S23 [Populus trichocarpa]
gi|566176125|ref|XP_006381492.1| 40s ribosomal protein
S23 [Populus trichocarpa] gi|118483731|gb|ABK93759.1|
unknown [Populus trichocarpa]
gi|118484067|gb|ABK93919.1| unknown [Populus
trichocarpa] gi|118487579|gb|ABK95615.1| unknown
[Populus trichocarpa] gi|222850935|gb|EEE88482.1|
putative 40S ribosomal protein s12 [Populus trichocarpa]
gi|222865381|gb|EEF02512.1| putative 40S ribosomal
protein s12 [Populus trichocarpa]
gi|222868082|gb|EEF05213.1| 40s ribosomal protein S23
[Populus trichocarpa] gi|550336196|gb|ERP59289.1| 40s
ribosomal protein S23 [Populus trichocarpa]
Length = 142
Score = 81.3 bits (199), Expect = 1e-13
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGAGRKL+ HRRRQ WADK+YKK NLGNEWKKPF
Sbjct: 1 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSNLGNEWKKPF 40
>tpg|DAA56964.1| TPA: hypothetical protein ZEAMMB73_934848, partial [Zea mays]
Length = 109
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +2
Query: 290 SHNMGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
S NMGKTRGMGAGRKL+ HRR Q WADKAYKK +LGNEWKKPF
Sbjct: 53 SVNMGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPF 95
>gb|EAZ14059.1| hypothetical protein OsJ_03983 [Oryza sativa Japonica Group]
Length = 312
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +2
Query: 290 SHNMGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
S NMGKTRGMGAGRKL+ HRR Q WADKAYKK +LGNEWKKPF
Sbjct: 168 SVNMGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPF 210
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGAGRKL+ HRR Q WADKAYKK +LGNEWKKPF
Sbjct: 1 MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPF 40
>ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [Cucumis sativus]
gi|449452122|ref|XP_004143809.1| PREDICTED: 40S
ribosomal protein S23-like [Cucumis sativus]
gi|449463681|ref|XP_004149560.1| PREDICTED: 40S
ribosomal protein S23-like [Cucumis sativus]
gi|449483351|ref|XP_004156564.1| PREDICTED: 40S
ribosomal protein S23-like [Cucumis sativus]
gi|449508653|ref|XP_004163373.1| PREDICTED: 40S
ribosomal protein S23-like [Cucumis sativus]
gi|449521770|ref|XP_004167902.1| PREDICTED: 40S
ribosomal protein S23-like [Cucumis sativus]
Length = 142
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGAGRKL+ HRRRQ WADKAYKK +LGNEWKKPF
Sbjct: 1 MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPF 40
>ref|XP_001763475.1| predicted protein [Physcomitrella patens]
gi|168037517|ref|XP_001771250.1| predicted protein
[Physcomitrella patens] gi|168054708|ref|XP_001779772.1|
predicted protein [Physcomitrella patens]
gi|168057595|ref|XP_001780799.1| predicted protein
[Physcomitrella patens] gi|168063338|ref|XP_001783629.1|
predicted protein [Physcomitrella patens]
gi|162664819|gb|EDQ51524.1| predicted protein
[Physcomitrella patens] gi|162667734|gb|EDQ54356.1|
predicted protein [Physcomitrella patens]
gi|162668857|gb|EDQ55456.1| predicted protein
[Physcomitrella patens] gi|162677491|gb|EDQ63961.1|
predicted protein [Physcomitrella patens]
gi|162685268|gb|EDQ71664.1| predicted protein
[Physcomitrella patens]
Length = 142
Score = 79.7 bits (195), Expect = 4e-13
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGAGRKL++HRR QLWADK+YKK +LGNEWKKPF
Sbjct: 1 MGKTRGMGAGRKLKNHRRAQLWADKSYKKSHLGNEWKKPF 40
>gb|EMJ19697.1| hypothetical protein PRUPE_ppa012246mg [Prunus persica]
Length = 178
Score = 79.3 bits (194), Expect = 5e-13
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGA RKL+DHRRRQ WADK+YKK +LGNEWKKPF
Sbjct: 37 MGKTRGMGAARKLKDHRRRQRWADKSYKKSHLGNEWKKPF 76
>gb|EMJ07313.1| hypothetical protein PRUPE_ppa013051mg [Prunus persica]
Length = 142
Score = 79.3 bits (194), Expect = 5e-13
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGA RKL+DHRRRQ WADK+YKK +LGNEWKKPF
Sbjct: 1 MGKTRGMGAARKLKDHRRRQRWADKSYKKSHLGNEWKKPF 40
>ref|NP_001274976.1| uncharacterized protein LOC102577739 [Solanum tuberosum]
gi|460402386|ref|XP_004246693.1| PREDICTED: 40S
ribosomal protein S23-like [Solanum lycopersicum]
gi|460408137|ref|XP_004249503.1| PREDICTED: 40S
ribosomal protein S23-like [Solanum lycopersicum]
gi|460408487|ref|XP_004249676.1| PREDICTED: 40S
ribosomal protein S23-like [Solanum lycopersicum]
gi|565343900|ref|XP_006339059.1| PREDICTED: 40S
ribosomal protein S23-like [Solanum tuberosum]
gi|565392167|ref|XP_006361778.1| PREDICTED: 40S
ribosomal protein S23-like [Solanum tuberosum]
gi|565396118|ref|XP_006363678.1| PREDICTED: 40S
ribosomal protein S23-like [Solanum tuberosum]
gi|567864018|ref|XP_006424658.1| hypothetical protein
CICLE_v10029532mg [Citrus clementina]
gi|568869968|ref|XP_006488186.1| PREDICTED: 40S
ribosomal protein S23-like [Citrus sinensis]
gi|77999293|gb|ABB16993.1| unknown [Solanum tuberosum]
gi|557526592|gb|ESR37898.1| hypothetical protein
CICLE_v10029532mg [Citrus clementina]
Length = 142
Score = 79.3 bits (194), Expect = 5e-13
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGAGRKL+ HRRRQ WADK+YKK +LGNEWKKPF
Sbjct: 1 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPF 40
>ref|XP_002284863.1| PREDICTED: 40S ribosomal protein S23-like [Vitis vinifera]
gi|225449164|ref|XP_002278466.1| PREDICTED: 40S
ribosomal protein S23-like [Vitis vinifera]
Length = 142
Score = 79.3 bits (194), Expect = 5e-13
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGAGRKL+ HR RQ WADKAYKK NLGNEWKKPF
Sbjct: 1 MGKTRGMGAGRKLKSHRIRQRWADKAYKKSNLGNEWKKPF 40
>gb|ESW16525.1| hypothetical protein PHAVU_007G163700g [Phaseolus vulgaris]
Length = 189
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/88 (45%), Positives = 58/88 (65%)
Frame = +2
Query: 155 LDRNITKTLVYLLNFEVGQSSRAASVRIANFFLVASESV*SFDSYSHNMGKTRGMGAGRK 334
+DRN + ++ +++ + Q + V + + L+ ++ S + MGKTRGMGA RK
Sbjct: 1 MDRNKPNSELHFVHYIIPQLQFSIRVFLL-WLLLILHNLRSCAPKNEAMGKTRGMGAARK 59
Query: 335 LRDHRRRQLWADKAYKKRNLGNEWKKPF 418
L+ HRRRQ WADK+YKK +LGNEWKKPF
Sbjct: 60 LKSHRRRQRWADKSYKKSHLGNEWKKPF 87
>ref|NP_001044720.1| Os01g0834500 [Oryza sativa Japonica Group]
gi|115456215|ref|NP_001051708.1| Os03g0818400 [Oryza
sativa Japonica Group] gi|297720551|ref|NP_001172637.1|
Os01g0834601 [Oryza sativa Japonica Group]
gi|357125752|ref|XP_003564554.1| PREDICTED: 40S
ribosomal protein S23-like [Brachypodium distachyon]
gi|357133327|ref|XP_003568277.1| PREDICTED: 40S
ribosomal protein S23-like [Brachypodium distachyon]
gi|573914602|ref|XP_006644968.1| PREDICTED: 40S
ribosomal protein S23-like [Oryza brachyantha]
gi|573944341|ref|XP_006654522.1| PREDICTED: 40S
ribosomal protein S23-like [Oryza brachyantha]
gi|582044863|pdb|3J60|X Chain X, Localization Of The
Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-em
Map Of Triticum Aestivum Translating 80s Ribosome
gi|20805266|dbj|BAB92932.1| putative 40s ribosomal
protein S23 [Oryza sativa Japonica Group]
gi|20805267|dbj|BAB92933.1| putative 40s ribosomal
protein S23 [Oryza sativa Japonica Group]
gi|21671347|dbj|BAC02683.1| putative 40s ribosomal
protein S23 [Oryza sativa Japonica Group]
gi|21671348|dbj|BAC02684.1| putative 40s ribosomal
protein S23 [Oryza sativa Japonica Group]
gi|28876025|gb|AAO60034.1| 40S ribosomal protein S23
[Oryza sativa Japonica Group] gi|29124115|gb|AAO65856.1|
40S ribosomal protein S23 [Oryza sativa Japonica Group]
gi|108711771|gb|ABF99566.1| 40S ribosomal protein S23,
putative, expressed [Oryza sativa Japonica Group]
gi|113534251|dbj|BAF06634.1| Os01g0834500 [Oryza sativa
Japonica Group] gi|113550179|dbj|BAF13622.1|
Os03g0818400 [Oryza sativa Japonica Group]
gi|125528286|gb|EAY76400.1| hypothetical protein
OsI_04329 [Oryza sativa Indica Group]
gi|125546216|gb|EAY92355.1| hypothetical protein
OsI_14082 [Oryza sativa Indica Group]
gi|215697420|dbj|BAG91414.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215734943|dbj|BAG95665.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255673847|dbj|BAH91367.1| Os01g0834601 [Oryza sativa
Japonica Group] gi|326501134|dbj|BAJ98798.1| predicted
protein [Hordeum vulgare subsp. vulgare]
gi|326506086|dbj|BAJ91282.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|475471084|gb|EMT02409.1| 40S
ribosomal protein S23 [Aegilops tauschii]
gi|475559749|gb|EMT13416.1| 40S ribosomal protein S23
[Aegilops tauschii] gi|475589092|gb|EMT21069.1| 40S
ribosomal protein S23 [Aegilops tauschii]
Length = 142
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGAGRKL+ HRR Q WADKAYKK +LGNEWKKPF
Sbjct: 1 MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPF 40
>gb|EMS46402.1| 40S ribosomal protein S23 [Triticum urartu]
Length = 172
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = +2
Query: 299 MGKTRGMGAGRKLRDHRRRQLWADKAYKKRNLGNEWKKPF 418
MGKTRGMGAGRKL+ HRR Q WADKAYKK +LGNEWKKPF
Sbjct: 1 MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPF 40