BLASTX nr result

ID: Ephedra26_contig00009373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00009373
         (463 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24352.1| unknown [Picea sitchensis]                              56   6e-06

>gb|ABK24352.1| unknown [Picea sitchensis]
          Length = 143

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/104 (29%), Positives = 51/104 (49%)
 Frame = +3

Query: 36  RNIHIDAFMRNIPSFFRFIRHFNAKXXXXXXXXXXXLLSISSDKPQTIQEYLKQQPPYSP 215
           +N +++ F     SFF  IR F +             L ++S+       Y++       
Sbjct: 55  KNHYLNLFFSKTSSFFNSIRRFRSPNENPRAATLAQRLRLTSE-----DLYVR------- 102

Query: 216 SSIDLLLLDKRRKFPVFGRIPKWFILVPNTLLLLFFYFNIYEPG 347
              D++  ++RRK PV+GR P W  ++PN +LLL FY+ +Y PG
Sbjct: 103 ---DMIRSERRRKPPVWGRPPTWTFIIPNLMLLLLFYYKVYLPG 143


Top