BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00009342
         (1887 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006836244.1| hypothetical protein AMTR_s00101p00125820 [A...   464   e-128
gb|ABF97811.1| DIRP family protein, expressed [Oryza sativa Japo...   454   e-125
gb|AAT77870.1| expressed protein [Oryza sativa Japonica Group]        454   e-125
ref|XP_006659112.1| PREDICTED: protein ALWAYS EARLY 2-like isofo...   439   e-120
ref|XP_006659111.1| PREDICTED: protein ALWAYS EARLY 2-like isofo...   439   e-120
gb|ABF97812.1| DIRP family protein, expressed [Oryza sativa Japo...   436   e-119
ref|XP_003572939.1| PREDICTED: protein ALWAYS EARLY 2-like [Brac...   436   e-119
ref|XP_004979548.1| PREDICTED: protein ALWAYS EARLY 3-like isofo...   434   e-119
ref|XP_002467823.1| hypothetical protein SORBIDRAFT_01g034706 [S...   432   e-118
gb|AFW59548.1| putative MYB DNA-binding domain superfamily prote...   424   e-116
ref|XP_004979546.1| PREDICTED: protein ALWAYS EARLY 3-like isofo...   420   e-114
ref|XP_004979543.1| PREDICTED: protein ALWAYS EARLY 3-like isofo...   420   e-114
ref|XP_001758205.1| predicted protein [Physcomitrella patens] gi...   419   e-114
dbj|BAJ88078.1| predicted protein [Hordeum vulgare subsp. vulgare]    418   e-114
ref|XP_006433345.1| hypothetical protein CICLE_v10000065mg [Citr...   412   e-112
ref|XP_004229301.1| PREDICTED: protein ALWAYS EARLY 3-like [Sola...   410   e-111
ref|XP_004979547.1| PREDICTED: protein ALWAYS EARLY 3-like isofo...   409   e-111
ref|XP_006342756.1| PREDICTED: protein ALWAYS EARLY 3-like [Sola...   408   e-111
emb|CBI26088.3| unnamed protein product [Vitis vinifera]              401   e-109
ref|XP_006433346.1| hypothetical protein CICLE_v10000065mg [Citr...   395   e-107

>ref|XP_006836244.1| hypothetical protein AMTR_s00101p00125820 [Amborella trichopoda]
            gi|548838744|gb|ERM99097.1| hypothetical protein
            AMTR_s00101p00125820 [Amborella trichopoda]
          Length = 1254

 Score =  464 bits (1195), Expect = e-128
 Identities = 299/658 (45%), Positives = 385/658 (58%), Gaps = 36/658 (5%)
 Frame = +3

Query: 9    KRRKPPLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNE 188
            ++  PP+ K  KR+RQL SG E S +DAL TLA +S   L  S   E ES  + KE++  
Sbjct: 388  EKSSPPVVK--KRSRQLISGDECSAIDALQTLADLSLTCLLPSSIVESESSVQVKEENGS 445

Query: 189  ILRSERP----RKPLKDFDTTDRKPKMVFPRQK-----GSEKSHENNFEVGMKEK----- 326
                ++P      P K   +  +K + V  ++K     G+E    +N ++G KEK     
Sbjct: 446  TDNVDKPYVQEHVPPK---SQRQKSRSVVHKEKRTSSQGAETVARDNAKLG-KEKSANAI 501

Query: 327  LSADLKP---------ETGHGDSLNDFXXXXXXXXXXXLLEALGDPCFGEPQKQEDLAVD 479
            +S D  P           G   SL              L          + QK E    +
Sbjct: 502  ISTDKSPRFRLSIDNMRKGKRKSLTGNVKPKPSKVDSELHSK-------DSQKAEGSIGE 554

Query: 480  GPKFRHKHKK---LGGLQISSKNSK-PTKALSESPLDNENTSPTGRVLQIPSQSNAEQVS 647
              K   K K+   +G +    K++K P ++ S   +   +   T    QI + +   QVS
Sbjct: 555  VKKSATKAKRVSQIGAVPKLGKSTKPPERSSSNIDVGKVDAHFTASAAQIATMN---QVS 611

Query: 648  LPKKFRSRRKAEPEKLSVSKFGKPKECSDSFGNMTGNGISGRHGDVIPFCSHLATDKTLG 827
            LP K RSRRK +  K  V    K  + SD+ G+  GN + G      P   H   D+   
Sbjct: 612  LPTKLRSRRKMDLPKTLVK---KDLKSSDTSGHFAGNEL-GTVNIKAPNNLHSHQDRVAE 667

Query: 828  VKTKLVHCLSSSKLRRWCTYEWFYSAIDWPWFVQNEFVEYLNHAGLGHVPRLTRVEWGVI 1007
            VK  LVHCLSS KLRRWCTYEWFYSAID+PWF Q+EFVEYLNH  LGHVPRLTRVEWGVI
Sbjct: 668  VKNALVHCLSSPKLRRWCTYEWFYSAIDYPWFAQSEFVEYLNHVRLGHVPRLTRVEWGVI 727

Query: 1008 RSSLGKPRRLSKMFLEEERKKLHKYREDVRNHYNEVRAGILEGLPTDLARPLSVGQRVIA 1187
            RSSLGK RRLSK FL+EER+KL KYRE VR HY+++R G+ EGLP D  RPLSVGQRVIA
Sbjct: 728  RSSLGKTRRLSKRFLQEEREKLEKYRESVRKHYSDLRNGLREGLPADFPRPLSVGQRVIA 787

Query: 1188 CHPKSREVRDGSILTVDKNRCRVQFDRQELGVEFVLDIDCMPLNPLENVPEAFRKKSVQP 1367
            CHPK+RE+ DGSILT+D NRCRVQFDR ELGVEFVLDIDCMPLN LEN+P+A ++K+ + 
Sbjct: 788  CHPKTREIHDGSILTIDGNRCRVQFDRPELGVEFVLDIDCMPLNQLENMPDALKRKNHEV 847

Query: 1368 DPLMQNFDNAVPDVSTRGW------FPGITQKVANETS---HSAPAKYSLNTLLNQAKVD 1520
                ++ ++   DV  + W       P  ++K+ N T      A   +S+NTL  QA+ D
Sbjct: 848  SNFREDLNDIKLDVKPKEWKVGEQLGPVPSEKLDNATDGPFFVAFPDHSMNTLFMQARGD 907

Query: 1521 TVDSVIXXXXXXXXXXXXXXXXXXXXPCTLAQVQAREADIRALAELTRALDKKEAILVEL 1700
            TVD+V+                    P +L+Q+QAREADI+ALAELTRALDKKEAIL+EL
Sbjct: 908  TVDAVMQAKAAANEVSFAAHQGMYNQPSSLSQIQAREADIKALAELTRALDKKEAILIEL 967

Query: 1701 RNMNDEVDLHKKNGEGMPNTENFQRQYAAVLQQLKEANEQVSAALTYLRQRNTYQENS 1874
            R+MN+E   + KN +   ++E F++QYA +L QL  AN+QV  AL  LRQRNTYQ+ S
Sbjct: 968  RHMNNEFGDNIKNTDLAKHSEQFKKQYAMLLVQLNGANDQVEKALITLRQRNTYQDTS 1025


>gb|ABF97811.1| DIRP family protein, expressed [Oryza sativa Japonica Group]
          Length = 1255

 Score =  454 bits (1169), Expect = e-125
 Identities = 273/620 (44%), Positives = 366/620 (59%), Gaps = 7/620 (1%)
 Frame = +3

Query: 24   PLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSE 203
            P +KS KRNRQLF G ESS LDAL TLA +S N L  S   E ES  + K+++ +    E
Sbjct: 465  PSKKSNKRNRQLFFGDESSALDALHTLADLSVNILQPSSIVESESSAQIKDENKDNDSDE 524

Query: 204  RPRKPLKDFDTTDRKPKMVFPRQKGSEKSHENNFEVGMKEKLSADLKPETGHGDSLNDFX 383
            +P  P       ++K K     +K   +S   + ++  ++K      P    G ++++  
Sbjct: 525  KPSMPAA-VSVLEKKDKSKSTVKKVKRQSELASADMAARKKARIAKVPNR-DGIAISETK 582

Query: 384  XXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKK-LGGLQISSKNSKPTKAL 560
                            D  FG   +++       K     K  L  ++ +  +++  K  
Sbjct: 583  QL--------------DSKFGVQTEKKKRKPSAAKISKDEKSALKDVEKTEVSAEEGKVS 628

Query: 561  SESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSVSKFGKPKECSDSF 740
            S   +D  +T+           +  +Q  L  K RSRR     K+ + K   P EC  + 
Sbjct: 629  SNKAMDTVDTT---------QGATTQQADLASKGRSRR-----KIGILKALAP-ECRPT- 672

Query: 741  GNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTYEWFYSAIDWPW 920
                 +G      D   +    A +  + +K  L HCLSS  LRRWCT+EWFYSAID+PW
Sbjct: 673  -----DGADDLRSDKFSY----AVNNVIDLKDSLSHCLSSRLLRRWCTFEWFYSAIDFPW 723

Query: 921  FVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEERKKLHKYREDVRN 1100
            F ++EFVEYLNH  LGHVPRLTRVEWGVIRSSLGKPRRLSK FL+EER+KL +YRE VR 
Sbjct: 724  FEKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLQEEREKLAQYRESVRQ 783

Query: 1101 HYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDKNRCRVQFDRQELG 1280
            HY E+R+G+ EGLPTDLARPL VGQRVIACHP++RE+ DG++L VD NRCRVQFDR ELG
Sbjct: 784  HYAELRSGVREGLPTDLARPLGVGQRVIACHPRTRELHDGNVLNVDHNRCRVQFDRPELG 843

Query: 1281 VEFVLDIDCMPLNPLENVPEAFRKKSVQPDPLMQNFDNAVPDVSTRGWFPGITQKVAN-- 1454
            VEFV+DIDCMPL+PLEN PE+ R++++         +    D S      G T+  +N  
Sbjct: 844  VEFVMDIDCMPLHPLENFPESLRRQNIVNKYYNSFSEAKFEDRSKELGTGGPTRFTSNVC 903

Query: 1455 ----ETSHSAPAKYSLNTLLNQAKVDTVDSVIXXXXXXXXXXXXXXXXXXXXPCTLAQVQ 1622
                + + + P+ Y +NTL+ QAK DTVDS+                     PCTL+Q+Q
Sbjct: 904  FDGGDATSNIPSNYPINTLMKQAKGDTVDSIAQAKVAVNEVAVAAQQSMYSQPCTLSQIQ 963

Query: 1623 AREADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNGEGMPNTENFQRQYAAVLQQL 1802
             READIRALAEL+RALDKKEA+LVELR+MN+EV   +K+GE   + E+F++QYA VL QL
Sbjct: 964  EREADIRALAELSRALDKKEALLVELRHMNEEVYGRQKDGEAFRDFEHFRKQYAMVLVQL 1023

Query: 1803 KEANEQVSAALTYLRQRNTY 1862
            +++N+ V++AL  LRQRNTY
Sbjct: 1024 RDSNDHVASALLSLRQRNTY 1043


>gb|AAT77870.1| expressed protein [Oryza sativa Japonica Group]
          Length = 1251

 Score =  454 bits (1169), Expect = e-125
 Identities = 273/620 (44%), Positives = 366/620 (59%), Gaps = 7/620 (1%)
 Frame = +3

Query: 24   PLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSE 203
            P +KS KRNRQLF G ESS LDAL TLA +S N L  S   E ES  + K+++ +    E
Sbjct: 461  PSKKSNKRNRQLFFGDESSALDALHTLADLSVNILQPSSIVESESSAQIKDENKDNDSDE 520

Query: 204  RPRKPLKDFDTTDRKPKMVFPRQKGSEKSHENNFEVGMKEKLSADLKPETGHGDSLNDFX 383
            +P  P       ++K K     +K   +S   + ++  ++K      P    G ++++  
Sbjct: 521  KPSMPAA-VSVLEKKDKSKSTVKKVKRQSELASADMAARKKARIAKVPNR-DGIAISETK 578

Query: 384  XXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKK-LGGLQISSKNSKPTKAL 560
                            D  FG   +++       K     K  L  ++ +  +++  K  
Sbjct: 579  QL--------------DSKFGVQTEKKKRKPSAAKISKDEKSALKDVEKTEVSAEEGKVS 624

Query: 561  SESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSVSKFGKPKECSDSF 740
            S   +D  +T+           +  +Q  L  K RSRR     K+ + K   P EC  + 
Sbjct: 625  SNKAMDTVDTT---------QGATTQQADLASKGRSRR-----KIGILKALAP-ECRPT- 668

Query: 741  GNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTYEWFYSAIDWPW 920
                 +G      D   +    A +  + +K  L HCLSS  LRRWCT+EWFYSAID+PW
Sbjct: 669  -----DGADDLRSDKFSY----AVNNVIDLKDSLSHCLSSRLLRRWCTFEWFYSAIDFPW 719

Query: 921  FVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEERKKLHKYREDVRN 1100
            F ++EFVEYLNH  LGHVPRLTRVEWGVIRSSLGKPRRLSK FL+EER+KL +YRE VR 
Sbjct: 720  FEKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLQEEREKLAQYRESVRQ 779

Query: 1101 HYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDKNRCRVQFDRQELG 1280
            HY E+R+G+ EGLPTDLARPL VGQRVIACHP++RE+ DG++L VD NRCRVQFDR ELG
Sbjct: 780  HYAELRSGVREGLPTDLARPLGVGQRVIACHPRTRELHDGNVLNVDHNRCRVQFDRPELG 839

Query: 1281 VEFVLDIDCMPLNPLENVPEAFRKKSVQPDPLMQNFDNAVPDVSTRGWFPGITQKVAN-- 1454
            VEFV+DIDCMPL+PLEN PE+ R++++         +    D S      G T+  +N  
Sbjct: 840  VEFVMDIDCMPLHPLENFPESLRRQNIVNKYYNSFSEAKFEDRSKELGTGGPTRFTSNVC 899

Query: 1455 ----ETSHSAPAKYSLNTLLNQAKVDTVDSVIXXXXXXXXXXXXXXXXXXXXPCTLAQVQ 1622
                + + + P+ Y +NTL+ QAK DTVDS+                     PCTL+Q+Q
Sbjct: 900  FDGGDATSNIPSNYPINTLMKQAKGDTVDSIAQAKVAVNEVAVAAQQSMYSQPCTLSQIQ 959

Query: 1623 AREADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNGEGMPNTENFQRQYAAVLQQL 1802
             READIRALAEL+RALDKKEA+LVELR+MN+EV   +K+GE   + E+F++QYA VL QL
Sbjct: 960  EREADIRALAELSRALDKKEALLVELRHMNEEVYGRQKDGEAFRDFEHFRKQYAMVLVQL 1019

Query: 1803 KEANEQVSAALTYLRQRNTY 1862
            +++N+ V++AL  LRQRNTY
Sbjct: 1020 RDSNDHVASALLSLRQRNTY 1039


>ref|XP_006659112.1| PREDICTED: protein ALWAYS EARLY 2-like isoform X2 [Oryza brachyantha]
          Length = 1158

 Score =  439 bits (1129), Expect = e-120
 Identities = 275/628 (43%), Positives = 372/628 (59%), Gaps = 9/628 (1%)
 Frame = +3

Query: 6    RKRRKPPLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSN 185
            RK R P  +KS KRNRQLF G ESS LDAL TLA +S N L  S   E ES  + K+++ 
Sbjct: 371  RKARWP--KKSNKRNRQLFFGDESSALDALHTLADLSVNILQPSSIVESESSAQIKDENK 428

Query: 186  EILRSERPRKPLKDFDTTDRKPKMVFPRQKGSEKSHENNFEVGMKEKLSADLKPETGHGD 365
            +I   E+P  P       ++K       +K   +S   + ++  ++K    +K   G G 
Sbjct: 429  DIDSDEKPNMPAS-VSVLEKKDNSRSTVKKVKRQSELASSDMATRKKARI-VKVPHGDGS 486

Query: 366  SLNDFXXXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKK-LGGLQISSKNS 542
            ++++                  D  FG   +++       K     K  L  ++ +  ++
Sbjct: 487  TISETKQL--------------DSKFGVKTEKKKRKPSVAKISKDEKSALKYIEKTEVSA 532

Query: 543  KPTKALSESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSVSKFGKPK 722
            +  K  S   +D  +T+  G   Q        Q  L  K RSRRK     + + K   P 
Sbjct: 533  EEGKVSSNKAMDTVDTATQGTTTQ--------QADLASKGRSRRK-----IGILKALAP- 578

Query: 723  ECSDSFGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTYEWFYS 902
            EC  +      +G      D + +      +  + +K  L HCLSS  LRRWC +EWFYS
Sbjct: 579  ECRPT------DGTDDPRSDKLSY----PVNNVIDLKDSLSHCLSSRLLRRWCMFEWFYS 628

Query: 903  AIDWPWFVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEERKKLHKY 1082
            AID+PWF ++EFVEYLNH  LGHVPRLTRVEWGVIRSSLGKPRRLSK FL+EER+KL +Y
Sbjct: 629  AIDFPWFEKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLQEEREKLAQY 688

Query: 1083 REDVRNHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDKNRCRVQF 1262
            RE VR HY E+R+G  EGLPTDLARPL VGQRVIACHP++RE+ DG++L VD NRCRVQF
Sbjct: 689  RESVRQHYAELRSGAREGLPTDLARPLGVGQRVIACHPRTRELHDGNVLNVDHNRCRVQF 748

Query: 1263 DRQELGVEFVLDIDCMPLNPLENVPEAFRKKSV---QPDPLMQ-NFDNAVPDVSTRGWFP 1430
            DR ++GVEFV DIDCMPL+PLEN PE+ R++++     + L +  F++   ++ T G   
Sbjct: 749  DRPDMGVEFVTDIDCMPLHPLENFPESLRRQNIVNKYYNGLSEGKFEDRPKELGT-GVPT 807

Query: 1431 GITQKV---ANETSHSAPAKYSLNTLLNQAKVD-TVDSVIXXXXXXXXXXXXXXXXXXXX 1598
              T  V     +T+ S P+ + +NTL+ QAK   TV+ V                     
Sbjct: 808  RFTSNVCFDGGDTTSSIPSSHPINTLMKQAKAKATVNDV----------TVAAQQSMYSQ 857

Query: 1599 PCTLAQVQAREADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNGEGMPNTENFQRQ 1778
            PCTL+Q+Q READIRALAEL+RALDKKEA+LVELR+MN+EV   +K+GE + + E+F++Q
Sbjct: 858  PCTLSQIQEREADIRALAELSRALDKKEALLVELRHMNEEVSGRQKDGEAIRDFEHFRKQ 917

Query: 1779 YAAVLQQLKEANEQVSAALTYLRQRNTY 1862
            YA VL QL+++N+ V++AL  LRQRNTY
Sbjct: 918  YAMVLVQLRDSNDHVASALLSLRQRNTY 945


>ref|XP_006659111.1| PREDICTED: protein ALWAYS EARLY 2-like isoform X1 [Oryza brachyantha]
          Length = 1160

 Score =  439 bits (1129), Expect = e-120
 Identities = 275/628 (43%), Positives = 372/628 (59%), Gaps = 9/628 (1%)
 Frame = +3

Query: 6    RKRRKPPLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSN 185
            RK R P  +KS KRNRQLF G ESS LDAL TLA +S N L  S   E ES  + K+++ 
Sbjct: 373  RKARWP--KKSNKRNRQLFFGDESSALDALHTLADLSVNILQPSSIVESESSAQIKDENK 430

Query: 186  EILRSERPRKPLKDFDTTDRKPKMVFPRQKGSEKSHENNFEVGMKEKLSADLKPETGHGD 365
            +I   E+P  P       ++K       +K   +S   + ++  ++K    +K   G G 
Sbjct: 431  DIDSDEKPNMPAS-VSVLEKKDNSRSTVKKVKRQSELASSDMATRKKARI-VKVPHGDGS 488

Query: 366  SLNDFXXXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKK-LGGLQISSKNS 542
            ++++                  D  FG   +++       K     K  L  ++ +  ++
Sbjct: 489  TISETKQL--------------DSKFGVKTEKKKRKPSVAKISKDEKSALKYIEKTEVSA 534

Query: 543  KPTKALSESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSVSKFGKPK 722
            +  K  S   +D  +T+  G   Q        Q  L  K RSRRK     + + K   P 
Sbjct: 535  EEGKVSSNKAMDTVDTATQGTTTQ--------QADLASKGRSRRK-----IGILKALAP- 580

Query: 723  ECSDSFGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTYEWFYS 902
            EC  +      +G      D + +      +  + +K  L HCLSS  LRRWC +EWFYS
Sbjct: 581  ECRPT------DGTDDPRSDKLSY----PVNNVIDLKDSLSHCLSSRLLRRWCMFEWFYS 630

Query: 903  AIDWPWFVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEERKKLHKY 1082
            AID+PWF ++EFVEYLNH  LGHVPRLTRVEWGVIRSSLGKPRRLSK FL+EER+KL +Y
Sbjct: 631  AIDFPWFEKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLQEEREKLAQY 690

Query: 1083 REDVRNHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDKNRCRVQF 1262
            RE VR HY E+R+G  EGLPTDLARPL VGQRVIACHP++RE+ DG++L VD NRCRVQF
Sbjct: 691  RESVRQHYAELRSGAREGLPTDLARPLGVGQRVIACHPRTRELHDGNVLNVDHNRCRVQF 750

Query: 1263 DRQELGVEFVLDIDCMPLNPLENVPEAFRKKSV---QPDPLMQ-NFDNAVPDVSTRGWFP 1430
            DR ++GVEFV DIDCMPL+PLEN PE+ R++++     + L +  F++   ++ T G   
Sbjct: 751  DRPDMGVEFVTDIDCMPLHPLENFPESLRRQNIVNKYYNGLSEGKFEDRPKELGT-GVPT 809

Query: 1431 GITQKV---ANETSHSAPAKYSLNTLLNQAKVD-TVDSVIXXXXXXXXXXXXXXXXXXXX 1598
              T  V     +T+ S P+ + +NTL+ QAK   TV+ V                     
Sbjct: 810  RFTSNVCFDGGDTTSSIPSSHPINTLMKQAKAKATVNDV----------TVAAQQSMYSQ 859

Query: 1599 PCTLAQVQAREADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNGEGMPNTENFQRQ 1778
            PCTL+Q+Q READIRALAEL+RALDKKEA+LVELR+MN+EV   +K+GE + + E+F++Q
Sbjct: 860  PCTLSQIQEREADIRALAELSRALDKKEALLVELRHMNEEVSGRQKDGEAIRDFEHFRKQ 919

Query: 1779 YAAVLQQLKEANEQVSAALTYLRQRNTY 1862
            YA VL QL+++N+ V++AL  LRQRNTY
Sbjct: 920  YAMVLVQLRDSNDHVASALLSLRQRNTY 947


>gb|ABF97812.1| DIRP family protein, expressed [Oryza sativa Japonica Group]
          Length = 1246

 Score =  436 bits (1122), Expect = e-119
 Identities = 266/620 (42%), Positives = 360/620 (58%), Gaps = 7/620 (1%)
 Frame = +3

Query: 24   PLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSE 203
            P +KS KRNRQLF G ESS LDAL TLA +S N L  S   E ES  + K+++ +    E
Sbjct: 465  PSKKSNKRNRQLFFGDESSALDALHTLADLSVNILQPSSIVESESSAQIKDENKDNDSDE 524

Query: 204  RPRKPLKDFDTTDRKPKMVFPRQKGSEKSHENNFEVGMKEKLSADLKPETGHGDSLNDFX 383
            +P  P       ++K K     +K   +S   + ++  ++K      P    G ++++  
Sbjct: 525  KPSMPAA-VSVLEKKDKSKSTVKKVKRQSELASADMAARKKARIAKVPNR-DGIAISETK 582

Query: 384  XXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKK-LGGLQISSKNSKPTKAL 560
                            D  FG   +++       K     K  L  ++ +  +++  K  
Sbjct: 583  QL--------------DSKFGVQTEKKKRKPSAAKISKDEKSALKDVEKTEVSAEEGKVS 628

Query: 561  SESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSVSKFGKPKECSDSF 740
            S   +D  +T+           +  +Q  L  K RSRR     K+ + K   P EC  + 
Sbjct: 629  SNKAMDTVDTT---------QGATTQQADLASKGRSRR-----KIGILKALAP-ECRPT- 672

Query: 741  GNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTYEWFYSAIDWPW 920
                 +G      D   +    A +  + +K  L HCLSS  LRRWCT+EWFYSAID+PW
Sbjct: 673  -----DGADDLRSDKFSY----AVNNVIDLKDSLSHCLSSRLLRRWCTFEWFYSAIDFPW 723

Query: 921  FVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEERKKLHKYREDVRN 1100
            F ++EFVEYLNH  LGHVPRLTRVEWGVIRSSLGKPRRLSK FL+EER+KL +YRE VR 
Sbjct: 724  FEKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLQEEREKLAQYRESVRQ 783

Query: 1101 HYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDKNRCRVQFDRQELG 1280
            HY E+R+G+ EGLPTDLARPL VGQRVIACHP++RE+ DG++L VD NRCRVQFDR ELG
Sbjct: 784  HYAELRSGVREGLPTDLARPLGVGQRVIACHPRTRELHDGNVLNVDHNRCRVQFDRPELG 843

Query: 1281 VEFVLDIDCMPLNPLENVPEAFRKKSVQPDPLMQNFDNAVPDVSTRGWFPGITQKVAN-- 1454
            VEFV+DIDCMPL+PLEN PE+ R++++         +    D S      G T+  +N  
Sbjct: 844  VEFVMDIDCMPLHPLENFPESLRRQNIVNKYYNSFSEAKFEDRSKELGTGGPTRFTSNVC 903

Query: 1455 ----ETSHSAPAKYSLNTLLNQAKVDTVDSVIXXXXXXXXXXXXXXXXXXXXPCTLAQVQ 1622
                + + + P+ Y +NTL+ QAK     + +                    PCTL+Q+Q
Sbjct: 904  FDGGDATSNIPSNYPINTLMKQAKAKVAVNEV---------AVAAQQSMYSQPCTLSQIQ 954

Query: 1623 AREADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNGEGMPNTENFQRQYAAVLQQL 1802
             READIRALAEL+RALDKK  +LVELR+MN+EV   +K+GE   + E+F++QYA VL QL
Sbjct: 955  EREADIRALAELSRALDKKATLLVELRHMNEEVYGRQKDGEAFRDFEHFRKQYAMVLVQL 1014

Query: 1803 KEANEQVSAALTYLRQRNTY 1862
            +++N+ V++AL  LRQRNTY
Sbjct: 1015 RDSNDHVASALLSLRQRNTY 1034


>ref|XP_003572939.1| PREDICTED: protein ALWAYS EARLY 2-like [Brachypodium distachyon]
          Length = 1165

 Score =  436 bits (1120), Expect = e-119
 Identities = 269/630 (42%), Positives = 355/630 (56%), Gaps = 14/630 (2%)
 Frame = +3

Query: 24   PLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSE 203
            P  KS KR+RQLF   ESS LDAL TLA +S N L  S   E ES    K++S +    +
Sbjct: 371  PSNKSNKRSRQLFFDDESSALDALYTLADLSVNILQPSSIAESESSAHIKDESRDNDFDD 430

Query: 204  RPRKP----LKDFDTTDRKPKMVFPRQKGSEKSHENNFEVGMKEKLSAD----------L 341
            +P  P    L +     RK K V    K   +   N      K +LS D          +
Sbjct: 431  KPSVPAALSLSEKKEKSRKMKKV----KRQSEIAGNEMVTRKKARLSKDPHHDEGAISEV 486

Query: 342  KPETGHGDSLNDFXXXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKKLGGL 521
            K +  +                  L          + +K E  A +G    +K +     
Sbjct: 487  KQQDCNVQKEKKKRKSATGKVIPKLFSKDEKNTMNDIEKTEVSAEEGKVSSNKGRHARVS 546

Query: 522  QISSKNSKPTKALSESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSV 701
             +S +N   +KA   SP   ++      +++    +  +Q  L  K RSRR     KL +
Sbjct: 547  PVSKQNK--SKAQESSPAHADSGKEAMDIVETTQNATTQQSDLTSKARSRR-----KLGI 599

Query: 702  SKFGKPKECSDSFGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWC 881
             K   P EC  +       G  G H +V         +  + +K KL HCLSS  LRRWC
Sbjct: 600  LKALAP-ECKPA------EGTDGSHDNV-----SYPVNNVIDLKDKLSHCLSSRFLRRWC 647

Query: 882  TYEWFYSAIDWPWFVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEE 1061
            TYEWFYSAID+PWF ++EFVEYLNH  LGHVPRLTRVEWGVIRSSLGKPRRLSK FL EE
Sbjct: 648  TYEWFYSAIDYPWFAKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLHEE 707

Query: 1062 RKKLHKYREDVRNHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDK 1241
            R+KL KYR  VR HY+E+R+G+ EGLPTDLARPL+VGQRVIACHPK+ E+ +GS+LTVD 
Sbjct: 708  REKLFKYRHSVRQHYDELRSGVREGLPTDLARPLAVGQRVIACHPKTGELHEGSVLTVDY 767

Query: 1242 NRCRVQFDRQELGVEFVLDIDCMPLNPLENVPEAFRKKSVQPDPLMQNFDNAVPDVSTRG 1421
            +RCRV FDR ELGVEFV+DIDCMPL+PLEN PE+ R++++         +    D S   
Sbjct: 768  HRCRVNFDRPELGVEFVMDIDCMPLHPLENFPESLRRQNIVNKYYSSFSEVKFEDRSREY 827

Query: 1422 WFPGITQKVANETSHSAPAKYSLNTLLNQAKVDTVDSVIXXXXXXXXXXXXXXXXXXXXP 1601
               G+ +  +N  +    AK ++N +   A+                            P
Sbjct: 828  GGGGVARFASNGDTFDTHAKATVNEVTGAAQ----------------------QAMYSQP 865

Query: 1602 CTLAQVQAREADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNGEGMPNTENFQRQY 1781
            CTL+Q+Q READI+ALAEL+R+LDKKEA+LVELR+MN+EV   +K+GE +   E+F++QY
Sbjct: 866  CTLSQIQEREADIKALAELSRSLDKKEALLVELRHMNEEVSAKQKDGETISELEHFRKQY 925

Query: 1782 AAVLQQLKEANEQVSAALTYLRQRNTYQEN 1871
            A VL QL+++N+ V++AL  LRQRNT+ E+
Sbjct: 926  AMVLVQLRDSNDHVASALLSLRQRNTFHEH 955


>ref|XP_004979548.1| PREDICTED: protein ALWAYS EARLY 3-like isoform X6 [Setaria italica]
          Length = 1156

 Score =  434 bits (1115), Expect = e-119
 Identities = 260/621 (41%), Positives = 359/621 (57%), Gaps = 5/621 (0%)
 Frame = +3

Query: 24   PLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSE 203
            P   S KR+RQLF   + S LDAL TLA +S N L  S   E ES  + K+++ +     
Sbjct: 377  PSSTSNKRSRQLFFDDDISALDALHTLADLSVNILQPSSVVESESSAQIKDENKDNDSDG 436

Query: 204  RPRKP--LKDFDTTDRKPKMVFPRQKGSEKSHENNFEVGMKEKLSADLKPETGHGDSLND 377
            +P  P  +  ++  D    M    ++ SE +  +     M  +  A L  +  H  S   
Sbjct: 437  KPSIPAAVSVYEQKDYSKSMAKKLKRQSEIASTD-----MVTRKKAKLAKDPHHDGSTTS 491

Query: 378  FXXXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKKLGGLQISSKNSKPTKA 557
                                     + ++     G K   K +K    ++S       K 
Sbjct: 492  -------------------------EVKQQACTCGVKTEKKKRKSSTGKVSKDEKNILKD 526

Query: 558  LSESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSVSKFGKPKECSDS 737
            + ++ +  E    +         +   Q  L  K +SRRK   +K S+++  KP E +D 
Sbjct: 527  VEKTEVSAEEGKVSSNKETTARGATPPQADLTSKVKSRRKGGIQK-SLTQECKPTEGADD 585

Query: 738  FGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTYEWFYSAIDWP 917
             G+           D + +    +    + VK KL HCLSS  LRRWC +EWFYSAID+P
Sbjct: 586  SGS-----------DKLSY----SLSNIIDVKDKLSHCLSSRLLRRWCMFEWFYSAIDYP 630

Query: 918  WFVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEERKKLHKYREDVR 1097
            WF ++EFVEYLNH  LGHVPRLTRVEWGVIRSSLGKPRRLSK FL EER+KL +YR+ VR
Sbjct: 631  WFAKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLCEEREKLSQYRDSVR 690

Query: 1098 NHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDKNRCRVQFDRQEL 1277
             HY E+R+GI EGLPTDLARPL+VGQRVIACHP++RE+ DG++LTVD NRCRVQFDR EL
Sbjct: 691  QHYAELRSGIREGLPTDLARPLAVGQRVIACHPRTRELHDGNVLTVDDNRCRVQFDRPEL 750

Query: 1278 GVEFVLDIDCMPLNPLENVPEAFRKKSVQPD---PLMQNFDNAVPDVSTRGWFPGITQKV 1448
            GVEFV+DIDCMPL+P EN PE+ R++++  +    L +  ++ + ++   G     +   
Sbjct: 751  GVEFVMDIDCMPLHPPENFPESLRQQNIVNEYYSRLSEANEDQMKELGNGGGARFTSNLN 810

Query: 1449 ANETSHSAPAKYSLNTLLNQAKVDTVDSVIXXXXXXXXXXXXXXXXXXXXPCTLAQVQAR 1628
              + +   P  + ++TL+ QAK D++DS+                     P TL+Q+Q R
Sbjct: 811  GADATFHIPPGHPISTLMKQAKGDSIDSIAQAKATVNEVTVATQQAIYNQPSTLSQIQER 870

Query: 1629 EADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNGEGMPNTENFQRQYAAVLQQLKE 1808
            EADIRALAEL+RALDKKEA+LVELR+MN+EV   +++GE + + E+F++QYA VL QL++
Sbjct: 871  EADIRALAELSRALDKKEALLVELRHMNEEVSGKQRDGEIIRDLEHFRKQYAMVLVQLRD 930

Query: 1809 ANEQVSAALTYLRQRNTYQEN 1871
            +N+QV+ AL  LRQRNTY  N
Sbjct: 931  SNDQVAGALLSLRQRNTYHGN 951


>ref|XP_002467823.1| hypothetical protein SORBIDRAFT_01g034706 [Sorghum bicolor]
            gi|241921677|gb|EER94821.1| hypothetical protein
            SORBIDRAFT_01g034706 [Sorghum bicolor]
          Length = 1145

 Score =  432 bits (1110), Expect = e-118
 Identities = 265/626 (42%), Positives = 358/626 (57%), Gaps = 7/626 (1%)
 Frame = +3

Query: 24   PLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSE 203
            P   S KR+RQLF   E S LDAL TLA +S N L  SP  E ES  + K+++ +     
Sbjct: 377  PSSTSNKRSRQLFFDDERSALDALHTLADLSVNILQPSPVVESESSAQIKDENKDNDSDG 436

Query: 204  RPRKPLKDFDTTDRKPKMVFPRQKGSEKSHENNFEVGMKEKLSADLKPETGHGDSLNDFX 383
            +P  P       ++K       +K   +S   + ++  ++K+   L  +T H  S     
Sbjct: 437  KPGIPAAAVSVYEQKDNSKSTSKKLKRQSEMASTDMVTRKKVK--LAKDTNHDGSTTS-- 492

Query: 384  XXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKKLGGLQISSKNSKPTKALS 563
                                   + ++     G K   K K   G  +  + + P     
Sbjct: 493  -----------------------EVKQQACTCGVKTEKKKKSSMGKILKEEKNMPKDVEK 529

Query: 564  ESPLDNENTSPTGRVLQIPSQSN----AEQVSLPKKFRSRRKAEPEKLSVSKFGKPKECS 731
                  E  + + + + I   +       Q  L  K +SRRK   +K S+++  KP E  
Sbjct: 530  TEVSPEEEKASSNKTMDIAETTTQVATTPQADLIAKGKSRRKLGIQK-SLTQECKPAE-- 586

Query: 732  DSFGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTYEWFYSAID 911
                   G G SG   D + +    +    + +K KL HCLSS  LRRWC +EWFYSAID
Sbjct: 587  -------GAGDSG--SDKLSY----SLSNIIDLKDKLSHCLSSRLLRRWCMFEWFYSAID 633

Query: 912  WPWFVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEERKKLHKYRED 1091
            +PWF ++EF+EYLNH  LGHVPRLTRVEWGVIRSSLGKPRRLSK FL EER+KL +YR+ 
Sbjct: 634  YPWFAKSEFIEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLHEEREKLAQYRDS 693

Query: 1092 VRNHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDKNRCRVQFDRQ 1271
            VR HY E+R+G+ EGLPTDLARPL+VGQRVIACHP++RE+ DG++LTVD N+CRVQFDR 
Sbjct: 694  VRQHYTELRSGVREGLPTDLARPLAVGQRVIACHPRTRELHDGNVLTVDHNQCRVQFDRP 753

Query: 1272 ELGVEFVLDIDCMPLNPLENVPEAFRKKSVQPDPLMQNFDNAVPDVSTRGWFPGITQKVA 1451
            ELGVE V DIDCMPL+PLEN PE+ R++S+         +    D        G ++   
Sbjct: 754  ELGVELVKDIDCMPLHPLENFPESLRQQSIFNGYYSHLSEAKYEDQMKELASGGASRSTL 813

Query: 1452 NETSHSA--PAKYSLNTLLNQAKVD-TVDSVIXXXXXXXXXXXXXXXXXXXXPCTLAQVQ 1622
            N     A  P+ + ++TL+ QAK   TV+ V                     PCTL+Q+Q
Sbjct: 814  NLNGADAAFPSGHPMSTLMKQAKAKATVNEV----------AVTTQQSMYSQPCTLSQIQ 863

Query: 1623 AREADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNGEGMPNTENFQRQYAAVLQQL 1802
             READIRAL EL+RALDKKEA+LVELR+MN+EV  ++++GE + + E+F++QYA VL QL
Sbjct: 864  EREADIRALGELSRALDKKEALLVELRHMNEEVSGNQRDGEIIRDLEHFRKQYAMVLVQL 923

Query: 1803 KEANEQVSAALTYLRQRNTYQENSGA 1880
            +++N+QV+AAL  LRQRNTY  N G+
Sbjct: 924  RDSNDQVAAALLSLRQRNTYHGNPGS 949


>gb|AFW59548.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 1151

 Score =  424 bits (1090), Expect = e-116
 Identities = 265/628 (42%), Positives = 360/628 (57%), Gaps = 10/628 (1%)
 Frame = +3

Query: 24   PLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSE 203
            P   S KR+RQLF   ES  LDAL TLA +S N L  S   E ES  + K++  +     
Sbjct: 377  PSSTSNKRSRQLFFDDESLALDALHTLADLSVNILQPSSVVESESSAQIKDEKRDNDSDG 436

Query: 204  RPRKPLKDFDTTDRK--PKMVFPRQKGSEKSHENNFEVGMKEKLSADLKPETGHGDSLND 377
            +P  P       ++K   K    + K   +    +     K KL+ D  P+   G + ++
Sbjct: 437  KPGIPAAAVSVYEQKDNSKSTSKKLKRQPEMASTDMVTRKKGKLAKDTHPD---GSTTSE 493

Query: 378  FXXXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKKLGG--LQISSKNSKPT 551
                                       ++     G K   K K   G  L+   K  K  
Sbjct: 494  V--------------------------KQQACTCGVKTEKKKKSSMGKILKDEKKMPKDV 527

Query: 552  KALSESPLDNENTS-PTGRVLQIPSQ-SNAEQVSLPKKFRSRRKAEPEKLSVSKFGKPKE 725
            +    SP + + +S  T  + +  +Q +      L  K +SRRK   +K S+++  KP E
Sbjct: 528  EKTEVSPEEEKTSSNKTMDIAETTTQVATTLHADLMAKGKSRRKLGIQK-SLTQECKPAE 586

Query: 726  CSDSFGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTYEWFYSA 905
                     G G SG   D + +    +    + +K KL HCLSS  LRRWC +EWFYSA
Sbjct: 587  ---------GAGDSG--SDKLSY----SLSNIIDLKDKLSHCLSSRLLRRWCMFEWFYSA 631

Query: 906  IDWPWFVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEERKKLHKYR 1085
            ID+PWF ++EFVEYLNH  LGHVPRLT VEWGVIRSSLGKPRRLSK FL EER+KL +YR
Sbjct: 632  IDYPWFAKSEFVEYLNHVKLGHVPRLTHVEWGVIRSSLGKPRRLSKQFLHEEREKLAQYR 691

Query: 1086 EDVRNHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDKNRCRVQFD 1265
            + VR HY E+ +G+ EGLPTDLARPL+VGQRVIACHP++RE+ DG++LTVD N+CRVQFD
Sbjct: 692  DSVRQHYTELLSGVREGLPTDLARPLAVGQRVIACHPRTRELHDGNVLTVDHNQCRVQFD 751

Query: 1266 RQELGVEFVLDIDCMPLNPLENVPEAFRKKSV----QPDPLMQNFDNAVPDVSTRGWFPG 1433
            R ELGVE V DIDCMPL+PLEN PE+ R +S             +++ + ++++ G    
Sbjct: 752  RPELGVELVKDIDCMPLHPLENFPESLRHQSAINGYYSHLSEAKYEDQMKELASGGAARS 811

Query: 1434 ITQKVANETSHSAPAKYSLNTLLNQAKVDTVDSVIXXXXXXXXXXXXXXXXXXXXPCTLA 1613
             +     + +   P+ + ++TL+ QAK +T  + +                    PCTL+
Sbjct: 812  TSNLNGTDATFYTPSGHPMSTLMKQAKANTAVNEV---------AVATQQSMYNQPCTLS 862

Query: 1614 QVQAREADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNGEGMPNTENFQRQYAAVL 1793
            Q+Q READIRAL EL+RALDKKEA+LVELR+MN+EV   +K+GE + + E+F++QYA VL
Sbjct: 863  QIQEREADIRALGELSRALDKKEALLVELRHMNEEVSGKQKDGEIIKDLEHFRKQYAMVL 922

Query: 1794 QQLKEANEQVSAALTYLRQRNTYQENSG 1877
             QL+++N+QV+AAL  LRQRNTY  NSG
Sbjct: 923  VQLRDSNDQVAAALLSLRQRNTYHGNSG 950


>ref|XP_004979546.1| PREDICTED: protein ALWAYS EARLY 3-like isoform X4 [Setaria italica]
          Length = 1176

 Score =  420 bits (1080), Expect = e-114
 Identities = 260/645 (40%), Positives = 359/645 (55%), Gaps = 29/645 (4%)
 Frame = +3

Query: 24   PLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSE 203
            P   S KR+RQLF   + S LDAL TLA +S N L  S   E ES  + K+++ +     
Sbjct: 373  PSSTSNKRSRQLFFDDDISALDALHTLADLSVNILQPSSVVESESSAQIKDENKDNDSDG 432

Query: 204  RPRKP--LKDFDTTDRKPKMVFPRQKGSEKSHENNFEVGMKEKLSADLKPETGHGDSLND 377
            +P  P  +  ++  D    M    ++ SE +  +     M  +  A L  +  H  S   
Sbjct: 433  KPSIPAAVSVYEQKDYSKSMAKKLKRQSEIASTD-----MVTRKKAKLAKDPHHDGSTTS 487

Query: 378  FXXXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKKLGGLQISSKNSKPTKA 557
                                     + ++     G K   K +K    ++S       K 
Sbjct: 488  -------------------------EVKQQACTCGVKTEKKKRKSSTGKVSKDEKNILKD 522

Query: 558  LSESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSVSKFGKPKECSDS 737
            + ++ +  E    +         +   Q  L  K +SRRK   +K S+++  KP E +D 
Sbjct: 523  VEKTEVSAEEGKVSSNKETTARGATPPQADLTSKVKSRRKGGIQK-SLTQECKPTEGADD 581

Query: 738  FGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTYEWFYSAIDWP 917
             G+           D + +    +    + VK KL HCLSS  LRRWC +EWFYSAID+P
Sbjct: 582  SGS-----------DKLSY----SLSNIIDVKDKLSHCLSSRLLRRWCMFEWFYSAIDYP 626

Query: 918  WFVQNEFVEYLNHAGLGHVPRLTRVEWGVIR------------------------SSLGK 1025
            WF ++EFVEYLNH  LGHVPRLTRVEWGVIR                        SSLGK
Sbjct: 627  WFAKSEFVEYLNHVKLGHVPRLTRVEWGVIRRFVIFNIFVNVNFSCICPLNLMFCSSLGK 686

Query: 1026 PRRLSKMFLEEERKKLHKYREDVRNHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSR 1205
            PRRLSK FL EER+KL +YR+ VR HY E+R+GI EGLPTDLARPL+VGQRVIACHP++R
Sbjct: 687  PRRLSKQFLCEEREKLSQYRDSVRQHYAELRSGIREGLPTDLARPLAVGQRVIACHPRTR 746

Query: 1206 EVRDGSILTVDKNRCRVQFDRQELGVEFVLDIDCMPLNPLENVPEAFRKKSVQPD---PL 1376
            E+ DG++LTVD NRCRVQFDR ELGVEFV+DIDCMPL+P EN PE+ R++++  +    L
Sbjct: 747  ELHDGNVLTVDDNRCRVQFDRPELGVEFVMDIDCMPLHPPENFPESLRQQNIVNEYYSRL 806

Query: 1377 MQNFDNAVPDVSTRGWFPGITQKVANETSHSAPAKYSLNTLLNQAKVDTVDSVIXXXXXX 1556
             +  ++ + ++   G     +     + +   P  + ++TL+ QAK D++DS+       
Sbjct: 807  SEANEDQMKELGNGGGARFTSNLNGADATFHIPPGHPISTLMKQAKGDSIDSIAQAKATV 866

Query: 1557 XXXXXXXXXXXXXXPCTLAQVQAREADIRALAELTRALDKKEAILVELRNMNDEVDLHKK 1736
                          P TL+Q+Q READIRALAEL+RALDKKEA+LVELR+MN+EV   ++
Sbjct: 867  NEVTVATQQAIYNQPSTLSQIQEREADIRALAELSRALDKKEALLVELRHMNEEVSGKQR 926

Query: 1737 NGEGMPNTENFQRQYAAVLQQLKEANEQVSAALTYLRQRNTYQEN 1871
            +GE + + E+F++QYA VL QL+++N+QV+ AL  LRQRNTY  N
Sbjct: 927  DGEIIRDLEHFRKQYAMVLVQLRDSNDQVAGALLSLRQRNTYHGN 971


>ref|XP_004979543.1| PREDICTED: protein ALWAYS EARLY 3-like isoform X1 [Setaria italica]
            gi|514809441|ref|XP_004979544.1| PREDICTED: protein
            ALWAYS EARLY 3-like isoform X2 [Setaria italica]
            gi|514809443|ref|XP_004979545.1| PREDICTED: protein
            ALWAYS EARLY 3-like isoform X3 [Setaria italica]
          Length = 1180

 Score =  420 bits (1080), Expect = e-114
 Identities = 260/645 (40%), Positives = 359/645 (55%), Gaps = 29/645 (4%)
 Frame = +3

Query: 24   PLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSE 203
            P   S KR+RQLF   + S LDAL TLA +S N L  S   E ES  + K+++ +     
Sbjct: 377  PSSTSNKRSRQLFFDDDISALDALHTLADLSVNILQPSSVVESESSAQIKDENKDNDSDG 436

Query: 204  RPRKP--LKDFDTTDRKPKMVFPRQKGSEKSHENNFEVGMKEKLSADLKPETGHGDSLND 377
            +P  P  +  ++  D    M    ++ SE +  +     M  +  A L  +  H  S   
Sbjct: 437  KPSIPAAVSVYEQKDYSKSMAKKLKRQSEIASTD-----MVTRKKAKLAKDPHHDGSTTS 491

Query: 378  FXXXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKKLGGLQISSKNSKPTKA 557
                                     + ++     G K   K +K    ++S       K 
Sbjct: 492  -------------------------EVKQQACTCGVKTEKKKRKSSTGKVSKDEKNILKD 526

Query: 558  LSESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSVSKFGKPKECSDS 737
            + ++ +  E    +         +   Q  L  K +SRRK   +K S+++  KP E +D 
Sbjct: 527  VEKTEVSAEEGKVSSNKETTARGATPPQADLTSKVKSRRKGGIQK-SLTQECKPTEGADD 585

Query: 738  FGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTYEWFYSAIDWP 917
             G+           D + +    +    + VK KL HCLSS  LRRWC +EWFYSAID+P
Sbjct: 586  SGS-----------DKLSY----SLSNIIDVKDKLSHCLSSRLLRRWCMFEWFYSAIDYP 630

Query: 918  WFVQNEFVEYLNHAGLGHVPRLTRVEWGVIR------------------------SSLGK 1025
            WF ++EFVEYLNH  LGHVPRLTRVEWGVIR                        SSLGK
Sbjct: 631  WFAKSEFVEYLNHVKLGHVPRLTRVEWGVIRRFVIFNIFVNVNFSCICPLNLMFCSSLGK 690

Query: 1026 PRRLSKMFLEEERKKLHKYREDVRNHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSR 1205
            PRRLSK FL EER+KL +YR+ VR HY E+R+GI EGLPTDLARPL+VGQRVIACHP++R
Sbjct: 691  PRRLSKQFLCEEREKLSQYRDSVRQHYAELRSGIREGLPTDLARPLAVGQRVIACHPRTR 750

Query: 1206 EVRDGSILTVDKNRCRVQFDRQELGVEFVLDIDCMPLNPLENVPEAFRKKSVQPD---PL 1376
            E+ DG++LTVD NRCRVQFDR ELGVEFV+DIDCMPL+P EN PE+ R++++  +    L
Sbjct: 751  ELHDGNVLTVDDNRCRVQFDRPELGVEFVMDIDCMPLHPPENFPESLRQQNIVNEYYSRL 810

Query: 1377 MQNFDNAVPDVSTRGWFPGITQKVANETSHSAPAKYSLNTLLNQAKVDTVDSVIXXXXXX 1556
             +  ++ + ++   G     +     + +   P  + ++TL+ QAK D++DS+       
Sbjct: 811  SEANEDQMKELGNGGGARFTSNLNGADATFHIPPGHPISTLMKQAKGDSIDSIAQAKATV 870

Query: 1557 XXXXXXXXXXXXXXPCTLAQVQAREADIRALAELTRALDKKEAILVELRNMNDEVDLHKK 1736
                          P TL+Q+Q READIRALAEL+RALDKKEA+LVELR+MN+EV   ++
Sbjct: 871  NEVTVATQQAIYNQPSTLSQIQEREADIRALAELSRALDKKEALLVELRHMNEEVSGKQR 930

Query: 1737 NGEGMPNTENFQRQYAAVLQQLKEANEQVSAALTYLRQRNTYQEN 1871
            +GE + + E+F++QYA VL QL+++N+QV+ AL  LRQRNTY  N
Sbjct: 931  DGEIIRDLEHFRKQYAMVLVQLRDSNDQVAGALLSLRQRNTYHGN 975


>ref|XP_001758205.1| predicted protein [Physcomitrella patens] gi|162690661|gb|EDQ77027.1|
            predicted protein [Physcomitrella patens]
          Length = 1323

 Score =  419 bits (1077), Expect = e-114
 Identities = 283/670 (42%), Positives = 352/670 (52%), Gaps = 43/670 (6%)
 Frame = +3

Query: 6    RKRRKP--PLQKSKKRNRQLFSGGESSGLDALATLAFMSQN--GLPLSP----------- 140
            ++RR+P  P  K KKR+RQLFSG  +SGLDALATLA  S    GL L             
Sbjct: 414  QRRRRPVSPPPKQKKRSRQLFSGDSNSGLDALATLAASSLELEGLELGENLNVVANAAAS 473

Query: 141  ---REELESPDRPKEQSNEILRSERPRKPLKDFDTTDRKPKMVFPRQKGSEKSHENNFEV 311
               + E       K+ S E+  S+   K  +  D  D              K  E +   
Sbjct: 474  FEDKTEKVEIKGGKQSSPEVANSKHDLKSSQAEDMQDLH---------NGSKEEEGDLNT 524

Query: 312  GMKEKLSADLKPETGHGDSLNDFXXXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKF 491
              +   S D +P T   DS               + + +     GE       A   P  
Sbjct: 525  EEEGAASEDRQPSTSPADSRK----RKRKHSGDKISKVVASVPEGE-------ASASPNP 573

Query: 492  RHKHKKLGGLQI--SSKNSKPTKALSESPLDNENTSPTGRVLQIPSQS------NAEQVS 647
              K KKL G ++  S +  K  K  SES + +   SP G   QI  +       + ++ S
Sbjct: 574  WTKLKKLAGTKLLSSKQGHKLLKRWSESGVADGADSP-GHGKQISMEGREDLSIDIDESS 632

Query: 648  LPKKFRSRRKAEPEKLSVSKFGKPKECSDSFGNMTGNGISGRHGDVIPFCSHLATDK-TL 824
            LP K RS++K  PEKL   K   P + +  F +     +         FC H   +  T 
Sbjct: 633  LPLKLRSKKKGVPEKLPTEKTSAPVKSNSGFNSPHQESVRKEQA----FCPHTTPELGTD 688

Query: 825  GVKTKLVHCLSSSKLRRWCTYEWFYSAIDWPWFVQNEFVEYLNHAGLGHVPRLTRVEWGV 1004
              K K++HCL   K+RRWC  EWFYSAID PWF +NEFVEYLNHAGLGHVPRLTRVEWGV
Sbjct: 689  SAKAKIIHCLCP-KVRRWCMCEWFYSAIDLPWFARNEFVEYLNHAGLGHVPRLTRVEWGV 747

Query: 1005 IRSSLGKPRRLSKMFLEEERKKLHKYREDVRNHYNEVRAGILEGLPTDLARPLSVGQRVI 1184
            IR SLGKPRRLSK FL+EER+KL  YRE VR HY+E+R G+ EGLP DLARPL+VGQ+VI
Sbjct: 748  IRGSLGKPRRLSKRFLQEEREKLETYRESVRTHYHELRNGLREGLPADLARPLTVGQKVI 807

Query: 1185 ACHPKSREVRDGSILTVDKNRCRVQFDRQELGVEFVLDIDCMPLNPLENVPEAFRK--KS 1358
            A HPK+RE+ DGSILTVD++RCRVQFDR ELGVE V+DID MP+ PLENVPE  R+   S
Sbjct: 808  ARHPKTREIHDGSILTVDRSRCRVQFDRPELGVELVMDIDAMPMYPLENVPEVMRRHFTS 867

Query: 1359 VQPDPLMQNFDNAVPDVSTRGWFPGITQKVANETSHSAPAKYS---LNTLLNQAKVDTVD 1529
            V+        D+     +  G   G+ +   NE         S   L+ L  +A+ DT+D
Sbjct: 868  VEGIERTPGDDSKPRAWNASGGVGGVARAALNERLERRVTMLSQRFLSDLSKRAQTDTLD 927

Query: 1530 -----------SVIXXXXXXXXXXXXXXXXXXXXPCTLAQVQAREADIRALAELTRALDK 1676
                       +V                     P    Q QA EAD RALAEL RALDK
Sbjct: 928  AVREAKEVTNRAVREAKDVTTKSAVASQRVGSHQPLGGFQAQAIEADARALAELARALDK 987

Query: 1677 KEAILVELRNMNDEVDLHKKNGEGMPNTENFQRQYAAVLQQLKEANEQVSAALTYLRQRN 1856
            KEA+++ELR MN E      N EG    +NFQRQYA V+ QLKE N+QV+ AL  LRQRN
Sbjct: 988  KEALVMELRQMNGEASC---NWEGFKAADNFQRQYATVVLQLKEVNKQVTNALLLLRQRN 1044

Query: 1857 TYQENSGATW 1886
             Y +N+   W
Sbjct: 1045 KYHDNAVLPW 1054


>dbj|BAJ88078.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 817

 Score =  418 bits (1074), Expect = e-114
 Identities = 267/627 (42%), Positives = 353/627 (56%), Gaps = 14/627 (2%)
 Frame = +3

Query: 24   PLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSE 203
            P  KS KR+RQLF G E S LDAL TLA +S N L  S   E ES  + K++S +    +
Sbjct: 22   PSNKSNKRSRQLFFGDELSALDALHTLADISVNILQPSSIAESESSAQFKDESKDNESDD 81

Query: 204  RPRKP--LKDFDTTDRKPKMVFPRQKGSEKSHENNFEVGMKEKLSADLKPETGHGDSLND 377
            +P  P  +  FD  D KP+     ++ SE +  N      K KLS D      H D    
Sbjct: 82   KPSVPAAVSLFDKKD-KPRKTKKIKRQSEIA-SNEMVTRKKAKLSKD-----HHHDGSTS 134

Query: 378  FXXXXXXXXXXXLLEALGDPC-----------FGEPQKQEDLAVDGPKFRHKHKKLGGLQ 524
                        + +    P              + +K E  A +G     K +      
Sbjct: 135  EVKQDDCKCGVKMEKKKRKPSTVKISKDEKNTLKDSEKTEVSAEEGKVSSSKGRHAHASP 194

Query: 525  ISSKNSKPTKALSESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSVS 704
            +S +N   +KA   SP   +        +     +  +Q     K +SRRK    K +++
Sbjct: 195  VSKQNK--SKAQESSPAHADFGKEAMDTVDTAENAITQQSDSASKSKSRRKLGILK-ALA 251

Query: 705  KFGKPKE-CSDSFGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWC 881
               KP E   DS  N++                    +  + +K KL HCLSS  LRRWC
Sbjct: 252  PESKPAEGADDSCDNVS-----------------YPVNNVIELKDKLSHCLSSRFLRRWC 294

Query: 882  TYEWFYSAIDWPWFVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEE 1061
              EWFYSAID+PWF ++EFVEYLNH  LGHVPRLTRVEWGVIRSSLGKPRRLSK FL+EE
Sbjct: 295  MSEWFYSAIDYPWFAKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLQEE 354

Query: 1062 RKKLHKYREDVRNHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDK 1241
            R+KL +YRE VR HY E+++G+ EGLPTDLARPL+VGQRVIA HPK+RE+ DGS+LTVD+
Sbjct: 355  REKLSQYRESVRQHYAELQSGVREGLPTDLARPLAVGQRVIARHPKTRELHDGSVLTVDR 414

Query: 1242 NRCRVQFDRQELGVEFVLDIDCMPLNPLENVPEAFRKKSVQPDPLMQNFDNAVPDVSTRG 1421
             RCRVQFDR ELGVEFV+DIDCMPL+PLEN PE+ R++++     +  + ++  +V    
Sbjct: 415  TRCRVQFDRPELGVEFVMDIDCMPLHPLENFPESLRRQNI-----VNKYYSSFSEVKF-- 467

Query: 1422 WFPGITQKVANETSHSAPAKYSLNTLLNQAKVDTVDSVIXXXXXXXXXXXXXXXXXXXXP 1601
                  +    E      A++  N        DT DS+                     P
Sbjct: 468  ------EDRPKEYGGGGAARFLPNG-------DTFDSIAQAKTTANEAAAAAQQAMYGQP 514

Query: 1602 CTLAQVQAREADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNGEGMPNTENFQRQY 1781
            CTL+Q+Q READIRALAEL+RALDKKEA+LV LR+MN+EV   +K+GE + + E+F++QY
Sbjct: 515  CTLSQIQEREADIRALAELSRALDKKEALLVGLRHMNEEVSGKQKDGETIRDLEHFRKQY 574

Query: 1782 AAVLQQLKEANEQVSAALTYLRQRNTY 1862
            A VL QL+++N+ V++AL  LRQRNT+
Sbjct: 575  AMVLVQLRDSNDHVASALLCLRQRNTF 601


>ref|XP_006433345.1| hypothetical protein CICLE_v10000065mg [Citrus clementina]
            gi|557535467|gb|ESR46585.1| hypothetical protein
            CICLE_v10000065mg [Citrus clementina]
          Length = 1173

 Score =  412 bits (1058), Expect = e-112
 Identities = 265/635 (41%), Positives = 357/635 (56%), Gaps = 14/635 (2%)
 Frame = +3

Query: 24   PLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSE 203
            PLQ  +KR+++LF G ES+ L+AL TLA +S   LP S  E  ES  + KE+       +
Sbjct: 368  PLQMQRKRSKKLFFGDESTALNALQTLADLSLM-LPDSTMES-ESSVQLKEERTAFDIDD 425

Query: 204  RPRKPLKDFDTTDRKPKM--VFPRQKGSEKSHENNFEVGMKEKLS----------ADLKP 347
            +   P ++  T+  K K+  + P++K      E    +  K KL           A++K 
Sbjct: 426  KSSAP-EETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDVETVAEVKE 484

Query: 348  ETGHGDSLNDFXXXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKKLGGLQI 527
            +    +S++               EAL D       + E LA +  KF  K K+      
Sbjct: 485  QPEPPNSMSKRKRKPVLSKKISNSEALTDTHMTRTLESEALAEEHNKFASKGKRTSQNSA 544

Query: 528  SSKNSKPTKALSESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSVSK 707
             SK  KP + L  S ++++N +    V        A   SLP K +SRRK + ++   SK
Sbjct: 545  QSKQWKPGRVLEGSSVNDQNRASIDLVAPTAQAPVASPASLPTKHQSRRKMDLKRKLSSK 604

Query: 708  FGKPKECSDSFGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTY 887
              K  E S        N +S               D+ L VK KL  CLSS+ +RRWCT+
Sbjct: 605  EMKFSENSLKT-QPNKNSLSQE-------------DRLLSVKEKLSGCLSSNMVRRWCTF 650

Query: 888  EWFYSAIDWPWFVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEERK 1067
            EWFYSAID+PWF   EFVEYLNH GLGH+PRLTRVEWGVIRSSLGKPRRLSK FL +ER+
Sbjct: 651  EWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDERE 710

Query: 1068 KLHKYREDVRNHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDKNR 1247
            KL +YRE VR HY E+R G+ EGLP DL RPLSVGQRVIA HPK+RE+ DGS+LT+D ++
Sbjct: 711  KLKQYRESVRKHYAELRTGVREGLPRDLPRPLSVGQRVIAIHPKTRELHDGSVLTIDHDK 770

Query: 1248 CRVQFDRQELGVEFVLDIDCMPLNPLENVPEAFRKKSVQPDPLMQNFDNAVPDVSTRGWF 1427
            CRVQFDR ELGVEFV+DID MP NPL+N+PEA R++ +  D     F     ++   G  
Sbjct: 771  CRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ-ISAD----KFSAISKELQVNGHP 825

Query: 1428 PGITQKVANETSHSAPAKYSLNTLLNQAKVDTVDSVIXXXXXXXXXXXXXXXXXXXXPCT 1607
               +  +     H   A    NTL  QAK D ++  +                     CT
Sbjct: 826  NFGSPMLFASDGHLEKAPILPNTLQKQAKGD-MNHALPQAKSLATDIVSAQQAAYGQLCT 884

Query: 1608 LAQVQAREADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNG--EGMPNTENFQRQY 1781
            + Q+QAREA +RAL+E+ RAL KKEA+L+EL+N N+++ L  +NG    + ++E  ++  
Sbjct: 885  VPQIQAREATVRALSEVNRALSKKEALLMELKNTNNDI-LESQNGGESSLKDSEPLKKHI 943

Query: 1782 AAVLQQLKEANEQVSAALTYLRQRNTYQENSGATW 1886
            A VL QLKEAN+Q S+AL  +RQ NT+ E+S  +W
Sbjct: 944  ATVLVQLKEANDQASSALLQVRQCNTHPESSRPSW 978


>ref|XP_004229301.1| PREDICTED: protein ALWAYS EARLY 3-like [Solanum lycopersicum]
          Length = 1121

 Score =  410 bits (1054), Expect = e-111
 Identities = 261/632 (41%), Positives = 359/632 (56%), Gaps = 13/632 (2%)
 Frame = +3

Query: 30   QKSKKRNRQ-LFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSER 206
            + S+KR+++ LF   ESS  DAL TLA +S   +P +  E+ ES  + K++ ++ +    
Sbjct: 350  KNSRKRSKKVLFGRDESSAFDALQTLADLSLM-MPTAENED-ESMIQVKDEIDDHVDESG 407

Query: 207  PRKPLKDFDTTDRKPKMVFPRQKGSEKSHENNFEV--------GMKEKLSADLKPETGHG 362
              + +      D++  M    +     S    FEV        G      A+  PE    
Sbjct: 408  SLEAIPAHRQRDKRGSMGVKSRWSQPLS---KFEVASSTVSKHGRVTPTDANTGPEAKQA 464

Query: 363  DSLNDFXXXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKKLGGLQISSKNS 542
                               +A G   +   + QE  A +  K +  +K     Q+S K  
Sbjct: 465  RKAQKAMSSKAR-------KAEGHLNYDVTESQEAAAKEASK-KSTNKGKRSYQVSPKFI 516

Query: 543  KPTKALSESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSVSKFGKPK 722
            K  +  S +    E +       QIP ++   QV+LP K RSRRK + +K        P 
Sbjct: 517  KDQEHSSCADPRTERSDSAQSTAQIPVEN---QVNLPTKVRSRRKMDLKK--------PL 565

Query: 723  ECSDSFGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTYEWFYS 902
               DS   M+  G+          C     DK   +K K+  CLS+ ++RRWCTYEWFYS
Sbjct: 566  RQKDS--KMSDKGLDDTSASFTALC-----DKAFSLKKKISSCLSNHQVRRWCTYEWFYS 618

Query: 903  AIDWPWFVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEERKKLHKY 1082
            AID+PWF + EFVEYL H GLGHVPRLTRVEWGVIRSSLGKPRR S+ FL EE++KL++Y
Sbjct: 619  AIDYPWFAKREFVEYLYHVGLGHVPRLTRVEWGVIRSSLGKPRRFSEQFLNEEKEKLNQY 678

Query: 1083 REDVRNHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDKNRCRVQF 1262
            RE VR+HY E+R G  EGLPTDLARPLSVGQRVIA HPK+RE+ DG++LTVD +RCRVQF
Sbjct: 679  RESVRSHYTELREGTREGLPTDLARPLSVGQRVIAIHPKTREIHDGNVLTVDHSRCRVQF 738

Query: 1263 DRQELGVEFVLDIDCMPLNPLENVPEAFRKKSVQPDPLMQNFDNAVPDVSTRGW--FP-G 1433
            DR ELGVEFV+DIDCMPLNP EN+P    + +   D   ++ +    +     +  FP G
Sbjct: 739  DRPELGVEFVMDIDCMPLNPFENMPTLLTRHADAVDKFFESSNELKINARANEFMQFPAG 798

Query: 1434 ITQKVANETSHSAPAKYSLNTLLNQAKVDTVDSVIXXXXXXXXXXXXXXXXXXXXPCTLA 1613
             +Q+  + +SH +P  + ++ LL Q KV + ++ +                    P  +A
Sbjct: 799  DSQENGDISSHFSPPNHPISNLLKQTKVVSAEADM-QSKSGVMETTAFQQIAYSKPSAVA 857

Query: 1614 QVQAREADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNGE-GMPNTENFQRQYAAV 1790
             +QA+EAD++ALAELTRALDKK+A++ ELR MND+V  ++K+G+  + ++E F++QYAAV
Sbjct: 858  LIQAKEADVQALAELTRALDKKDAVVSELRRMNDDVLENQKSGDCSLKDSEPFKKQYAAV 917

Query: 1791 LQQLKEANEQVSAALTYLRQRNTYQENSGATW 1886
            L QL E NEQVS+AL  LRQRNTY  +    W
Sbjct: 918  LIQLNEVNEQVSSALFRLRQRNTYHGSIPLAW 949


>ref|XP_004979547.1| PREDICTED: protein ALWAYS EARLY 3-like isoform X5 [Setaria italica]
          Length = 1171

 Score =  409 bits (1050), Expect = e-111
 Identities = 260/646 (40%), Positives = 357/646 (55%), Gaps = 30/646 (4%)
 Frame = +3

Query: 24   PLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSE 203
            P   S KR+RQLF   + S LDAL TLA +S N L  S   E ES  + K+++ +     
Sbjct: 377  PSSTSNKRSRQLFFDDDISALDALHTLADLSVNILQPSSVVESESSAQIKDENKDNDSDG 436

Query: 204  RPRKP--LKDFDTTDRKPKMVFPRQKGSEKSHENNFEVGMKEKLSADLKPETGHGDSLND 377
            +P  P  +  ++  D    M    ++ SE +  +     M  +  A L  +  H  S   
Sbjct: 437  KPSIPAAVSVYEQKDYSKSMAKKLKRQSEIASTD-----MVTRKKAKLAKDPHHDGSTTS 491

Query: 378  FXXXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKKLGGLQISSKNSKPTKA 557
                                     + ++     G K   K +K    ++S       K 
Sbjct: 492  -------------------------EVKQQACTCGVKTEKKKRKSSTGKVSKDEKNILKD 526

Query: 558  LSESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSVSKFGKPKECSDS 737
            + ++ +  E    +         +   Q  L  K +SRRK   +K S+++  KP E +D 
Sbjct: 527  VEKTEVSAEEGKVSSNKETTARGATPPQADLTSKVKSRRKGGIQK-SLTQECKPTEGADD 585

Query: 738  FGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTYEWFYSAIDWP 917
             G+           D + +    +    + VK KL HCLSS  LRRWC +EWFYSAID+P
Sbjct: 586  SGS-----------DKLSY----SLSNIIDVKDKLSHCLSSRLLRRWCMFEWFYSAIDYP 630

Query: 918  WFVQNEFVEYLNHAGLGHVPRLTRVEWGVIR------------------------SSLGK 1025
            WF ++EFVEYLNH  LGHVPRLTRVEWGVIR                        SSLGK
Sbjct: 631  WFAKSEFVEYLNHVKLGHVPRLTRVEWGVIRRFVIFNIFVNVNFSCICPLNLMFCSSLGK 690

Query: 1026 PRRLSKMFLEEERKKLHKYREDVRNHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSR 1205
            PRRLSK FL EER+KL +YR+ VR HY E+R+GI EGLPTDLARPL+VGQRVIACHP++R
Sbjct: 691  PRRLSKQFLCEEREKLSQYRDSVRQHYAELRSGIREGLPTDLARPLAVGQRVIACHPRTR 750

Query: 1206 EVRDGSILTVDKNRCRVQFDRQELGVEFVLDIDCMPLNPLENVPEAFRKKSVQPD---PL 1376
            E+ DG++LTVD NRCRVQFDR ELGVEFV+DIDCMPL+P EN PE+ R++++  +    L
Sbjct: 751  ELHDGNVLTVDDNRCRVQFDRPELGVEFVMDIDCMPLHPPENFPESLRQQNIVNEYYSRL 810

Query: 1377 MQNFDNAVPDVSTRGWFPGITQKVANETSHSAPAKYSLNTLLNQAKVD-TVDSVIXXXXX 1553
             +  ++ + ++   G     +     + +   P  + ++TL+ QAK   TV+ V      
Sbjct: 811  SEANEDQMKELGNGGGARFTSNLNGADATFHIPPGHPISTLMKQAKAKATVNEV------ 864

Query: 1554 XXXXXXXXXXXXXXXPCTLAQVQAREADIRALAELTRALDKKEAILVELRNMNDEVDLHK 1733
                           P TL+Q+Q READIRALAEL+RALDKKEA+LVELR+MN+EV   +
Sbjct: 865  ----TVATQQAIYNQPSTLSQIQEREADIRALAELSRALDKKEALLVELRHMNEEVSGKQ 920

Query: 1734 KNGEGMPNTENFQRQYAAVLQQLKEANEQVSAALTYLRQRNTYQEN 1871
            ++GE + + E+F++QYA VL QL+++N+QV+ AL  LRQRNTY  N
Sbjct: 921  RDGEIIRDLEHFRKQYAMVLVQLRDSNDQVAGALLSLRQRNTYHGN 966


>ref|XP_006342756.1| PREDICTED: protein ALWAYS EARLY 3-like [Solanum tuberosum]
          Length = 1132

 Score =  408 bits (1049), Expect = e-111
 Identities = 259/632 (40%), Positives = 359/632 (56%), Gaps = 13/632 (2%)
 Frame = +3

Query: 30   QKSKKRNRQ-LFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSER 206
            + S+KR+++ LF   ESS  DAL TLA +S   +P +  E+ ES    K++ ++ +    
Sbjct: 361  KNSRKRSKKVLFGRDESSAFDALQTLADLSLM-MPTAENED-ESMIHVKDEIDDHVDESG 418

Query: 207  PRKPLKDFDTTDRKPKMVFPRQKGSEKSHENNFEV--------GMKEKLSADLKPETGHG 362
              + +      D++  M    +     S    FEV        G       +  PET   
Sbjct: 419  SLEAIPAHRQRDKRGSMGVKSRWSQPLS---KFEVASSTVSKHGKVTSTDVNAGPETKQA 475

Query: 363  DSLNDFXXXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKKLGGLQISSKNS 542
                               +A G   +   + QE +A +  K +  +K     Q+S K  
Sbjct: 476  RRAQKAMSSKAR-------KAEGHVNYDVTESQEAVAKEASK-KSTNKGKRSYQVSPKLI 527

Query: 543  KPTKALSESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSVSKFGKPK 722
            K  +  S +    E +       QIP ++   QV+LP K RSRRK + +K    +  K  
Sbjct: 528  KDQEHSSCADPRTERSDSAQSTAQIPVEN---QVNLPTKVRSRRKMDLKK---PQRQKDL 581

Query: 723  ECSDSFGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTYEWFYS 902
            + SD   + T    +  H            DK   +K K+  CLS+ ++RRWCTYEWFYS
Sbjct: 582  KMSDKSLDDTSASFTALH------------DKVFSLKKKISSCLSNHQVRRWCTYEWFYS 629

Query: 903  AIDWPWFVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEERKKLHKY 1082
            AID+PWF + EFVEYL+H GLGHVPRLTRVEWGVIRSSLGKPRR S+ FL EE++KL++Y
Sbjct: 630  AIDYPWFAKREFVEYLHHVGLGHVPRLTRVEWGVIRSSLGKPRRFSEQFLNEEKEKLNQY 689

Query: 1083 REDVRNHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDKNRCRVQF 1262
            RE VR+HY E+R G  EGLPTDLARPLSVGQRVIA HPK+RE+ DG++LTVD +RCRVQF
Sbjct: 690  RESVRSHYTELREGTREGLPTDLARPLSVGQRVIAIHPKTREIHDGNVLTVDHSRCRVQF 749

Query: 1263 DRQELGVEFVLDIDCMPLNPLENVPEAFRKKSVQPDPLMQNFDNAVPDVSTRGW--FP-G 1433
            DR ELGVEFV+DIDCMPLNP EN+P    + +   D   ++ +    +     +  FP G
Sbjct: 750  DRPELGVEFVMDIDCMPLNPFENMPTLLTRHADAVDKFFESSNELKMNARANEFMQFPAG 809

Query: 1434 ITQKVANETSHSAPAKYSLNTLLNQAKVDTVDSVIXXXXXXXXXXXXXXXXXXXXPCTLA 1613
             +Q+  + + H +P  + ++ LL Q KV + ++ +                    P   +
Sbjct: 810  DSQENGDISFHFSPPNHPISNLLKQTKVASAEADM-QSKSGVMETTAYQQIAYSKPSAAS 868

Query: 1614 QVQAREADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNGE-GMPNTENFQRQYAAV 1790
            Q+QA+EAD++ALAELTRALDKK+A++ ELR MND+V  ++KN +  + ++E F++QYAAV
Sbjct: 869  QIQAKEADVQALAELTRALDKKDAVVSELRRMNDDVLENQKNNDCSLKDSEPFKKQYAAV 928

Query: 1791 LQQLKEANEQVSAALTYLRQRNTYQENSGATW 1886
            L QL E NEQVS+AL  LRQRNTY  +    W
Sbjct: 929  LIQLNEVNEQVSSALFRLRQRNTYHGSIPLAW 960


>emb|CBI26088.3| unnamed protein product [Vitis vinifera]
          Length = 1127

 Score =  401 bits (1030), Expect = e-109
 Identities = 264/641 (41%), Positives = 355/641 (55%), Gaps = 22/641 (3%)
 Frame = +3

Query: 30   QKSKKRNRQ-LFSGGESSGLDALATLAFMSQNGLPLSPREELESPDR-PKEQSNEILRSE 203
            Q ++KR+++ LF G E +  DAL TLA +S     + P   +++    P +  N  +  E
Sbjct: 303  QGTRKRSKKVLFGGDEGTAFDALQTLADLSL----MMPATNIDTESSVPVKGENIDIVDE 358

Query: 204  RPRKPLKDFDTTDRKPKMVFPRQKGSEKSHENNF---EVGMKEKLSA-DLK--PETGHGD 365
                 +   +    KP+ +  + KG+      N    +    EK SA D+   PE   G 
Sbjct: 359  SKTLDVMPVNHRREKPRTLGAKVKGNNSVPGVNIPPLKASKLEKFSALDISSFPEIKEGP 418

Query: 366  SLNDFXXXXXXXXXXXLL----EALGDPCFGEPQKQEDLAVDGPKFRHKHKKLGGLQISS 533
              +                   E   D      QK E    +G K   K K+        
Sbjct: 419  QPSITGSRKRKQKSFGFKGMESETHSDSNLSVSQKTE-ATDEGKKPVSKGKRSSHSASHP 477

Query: 534  KNSKPTKALSESPLDNENTSPTGRVLQIPSQ-SNAEQVSLPKKFRSRRKAEPEKLSVSKF 710
            K  K  K         E T      L +P+Q S+A QV LP K RSRRK + +K S   F
Sbjct: 478  KQGKLVKPPERCSSSTE-TRREENYLVVPAQVSSANQVHLPTKVRSRRKMDTQKPS---F 533

Query: 711  GKPKECSDSFGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTYE 890
             K    ++++ N            +IP  S    D+   +K KL +CLS  ++RRWC +E
Sbjct: 534  QKDLRFAENYVN---------DQPIIPIPS--VQDRARTLKEKLSNCLSCYRVRRWCAFE 582

Query: 891  WFYSAIDWPWFVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEERKK 1070
            WFYSAID+PWF + EFVEYL+H GLGHVPRLTRVEWGVIRSSLGKPRR S+ FL+EE++K
Sbjct: 583  WFYSAIDYPWFAKKEFVEYLDHVGLGHVPRLTRVEWGVIRSSLGKPRRFSEQFLKEEKEK 642

Query: 1071 LHKYREDVRNHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDKNRC 1250
            L++YR+ VR HY E+RAG  EGLPTDLA PLSVGQRV+A HP++RE+ DG +LTVD+  C
Sbjct: 643  LNQYRDSVRTHYTELRAGTREGLPTDLAPPLSVGQRVVALHPRTREIHDGKVLTVDRTWC 702

Query: 1251 RVQFDRQELGVEFVLDIDCMPLNPLENVPEAFRKKSVQPDPLMQNFD----NAVP---DV 1409
            RVQF+R ELGVE V+DIDCMPLNPLEN+P +  K S+  +   +N      N  P    +
Sbjct: 703  RVQFERPELGVELVMDIDCMPLNPLENMPASLTKHSLAVNKFFENVSELKMNGGPKDRKI 762

Query: 1410 STRGWF-PGITQKVANETSHSAPAKYSLNTLLNQAKVDTVDSVIXXXXXXXXXXXXXXXX 1586
            +  G F      +  +  SH +P+ Y +N LL Q K  + ++                  
Sbjct: 763  TEYGKFSTSENMENVDGPSHLSPSTYPINNLLKQTKAGSTNANF-HAKVGSGEAANSQQV 821

Query: 1587 XXXXPCTLAQVQAREADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNGE-GMPNTE 1763
                   LAQ Q +EAD++AL+ELTRALDKKEA+L ELR MNDEV  + K+G+  +  ++
Sbjct: 822  ANSQSIILAQNQGKEADVQALSELTRALDKKEAVLCELRRMNDEVSENYKDGDSSLKESD 881

Query: 1764 NFQRQYAAVLQQLKEANEQVSAALTYLRQRNTYQENSGATW 1886
             F++QYAA+L QL E +EQVS+AL  LRQRNTY+ NS  TW
Sbjct: 882  LFKKQYAALLVQLNEVDEQVSSALIRLRQRNTYRGNSPVTW 922


>ref|XP_006433346.1| hypothetical protein CICLE_v10000065mg [Citrus clementina]
            gi|557535468|gb|ESR46586.1| hypothetical protein
            CICLE_v10000065mg [Citrus clementina]
          Length = 1165

 Score =  395 bits (1015), Expect = e-107
 Identities = 260/635 (40%), Positives = 351/635 (55%), Gaps = 14/635 (2%)
 Frame = +3

Query: 24   PLQKSKKRNRQLFSGGESSGLDALATLAFMSQNGLPLSPREELESPDRPKEQSNEILRSE 203
            PLQ  +KR+++LF G ES+ L+AL TLA +S   LP S  E  ES  + KE+       +
Sbjct: 368  PLQMQRKRSKKLFFGDESTALNALQTLADLSLM-LPDSTMES-ESSVQLKEERTAFDIDD 425

Query: 204  RPRKPLKDFDTTDRKPKM--VFPRQKGSEKSHENNFEVGMKEKLS----------ADLKP 347
            +   P ++  T+  K K+  + P++K      E    +  K KL           A++K 
Sbjct: 426  KSSAP-EETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDVETVAEVKE 484

Query: 348  ETGHGDSLNDFXXXXXXXXXXXLLEALGDPCFGEPQKQEDLAVDGPKFRHKHKKLGGLQI 527
            +    +S++               EAL D       + E LA +  KF  K K+      
Sbjct: 485  QPEPPNSMSKRKRKPVLSKKISNSEALTDTHMTRTLESEALAEEHNKFASKGKRTSQNSA 544

Query: 528  SSKNSKPTKALSESPLDNENTSPTGRVLQIPSQSNAEQVSLPKKFRSRRKAEPEKLSVSK 707
             SK  KP + L  S ++++N +    V        A   SLP K +SRRK + ++   SK
Sbjct: 545  QSKQWKPGRVLEGSSVNDQNRASIDLVAPTAQAPVASPASLPTKHQSRRKMDLKRKLSSK 604

Query: 708  FGKPKECSDSFGNMTGNGISGRHGDVIPFCSHLATDKTLGVKTKLVHCLSSSKLRRWCTY 887
              K  E S        N +S               D+ L VK KL  CLSS+ +RRWCT+
Sbjct: 605  EMKFSENSLKT-QPNKNSLSQE-------------DRLLSVKEKLSGCLSSNMVRRWCTF 650

Query: 888  EWFYSAIDWPWFVQNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKMFLEEERK 1067
            EWFYSAID+PWF   EFVEYLNH GLGH+PRLTRVEWGVIRSSLGKPRRLSK FL +ER+
Sbjct: 651  EWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDERE 710

Query: 1068 KLHKYREDVRNHYNEVRAGILEGLPTDLARPLSVGQRVIACHPKSREVRDGSILTVDKNR 1247
            KL +YRE VR HY E+R G+ EGLP DL RPLSVGQRVIA HPK+RE+ DGS+LT+D ++
Sbjct: 711  KLKQYRESVRKHYAELRTGVREGLPRDLPRPLSVGQRVIAIHPKTRELHDGSVLTIDHDK 770

Query: 1248 CRVQFDRQELGVEFVLDIDCMPLNPLENVPEAFRKKSVQPDPLMQNFDNAVPDVSTRGWF 1427
            CRVQFDR ELGVEFV+DID MP NPL+N+PEA R++ +  D     F     ++   G  
Sbjct: 771  CRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ-ISAD----KFSAISKELQVNGHP 825

Query: 1428 PGITQKVANETSHSAPAKYSLNTLLNQAKVDTVDSVIXXXXXXXXXXXXXXXXXXXXPCT 1607
               +  +     H   A    NTL  QAK D ++  +                     CT
Sbjct: 826  NFGSPMLFASDGHLEKAPILPNTLQKQAKGD-MNHALPQAKSLATDIVSAQQAAYGQLCT 884

Query: 1608 LAQVQAREADIRALAELTRALDKKEAILVELRNMNDEVDLHKKNG--EGMPNTENFQRQY 1781
            + Q+QAREA +RAL+E        EA+L+EL+N N+++ L  +NG    + ++E  ++  
Sbjct: 885  VPQIQAREATVRALSE--------EALLMELKNTNNDI-LESQNGGESSLKDSEPLKKHI 935

Query: 1782 AAVLQQLKEANEQVSAALTYLRQRNTYQENSGATW 1886
            A VL QLKEAN+Q S+AL  +RQ NT+ E+S  +W
Sbjct: 936  ATVLVQLKEANDQASSALLQVRQCNTHPESSRPSW 970