BLASTX nr result

ID: Ephedra26_contig00009044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00009044
         (1134 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   512   e-143
ref|XP_001763680.1| predicted protein [Physcomitrella patens] gi...   512   e-143
ref|XP_006446872.1| hypothetical protein CICLE_v10017882mg [Citr...   511   e-142
ref|XP_006468943.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   509   e-142
ref|XP_006468941.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   509   e-142
ref|XP_004951531.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   501   e-139
ref|XP_006468942.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   501   e-139
ref|XP_006852211.1| hypothetical protein AMTR_s00049p00131010 [A...   501   e-139
ref|XP_002320399.1| hypothetical protein POPTR_0014s13620g [Popu...   501   e-139
ref|XP_004303761.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   496   e-138
ref|XP_004303760.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   496   e-138
sp|Q0E2Z7.2|RH41_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ...   493   e-137
gb|EEE56516.1| hypothetical protein OsJ_05798 [Oryza sativa Japo...   493   e-137
gb|EEC72698.1| hypothetical protein OsI_06281 [Oryza sativa Indi...   493   e-137
ref|XP_006354193.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   492   e-136
ref|XP_006299543.1| hypothetical protein CARUB_v10015716mg, part...   491   e-136
ref|XP_002453503.1| hypothetical protein SORBIDRAFT_04g006980 [S...   490   e-136
ref|XP_006647045.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   489   e-135
ref|XP_004228633.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   488   e-135
ref|NP_974208.1| DEAD-box ATP-dependent RNA helicase 41 [Arabido...   488   e-135

>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
            vinifera]
          Length = 540

 Score =  512 bits (1319), Expect = e-143
 Identities = 254/377 (67%), Positives = 310/377 (82%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            FS+C    KL +N+  AGY+IPTPVQMQ IPAA+ G++LLVSADTGSGKTASFL+PIVS+
Sbjct: 139  FSSCNLPQKLLQNIEAAGYEIPTPVQMQAIPAALVGKNLLVSADTGSGKTASFLVPIVSR 198

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            C  IR     +Q  PLAM+L PTRELC QVEEQAK +GKGLPFKTALVVGGDAMPRQ++R
Sbjct: 199  CTSIRPDHSPNQKNPLAMVLTPTRELCMQVEEQAKLLGKGLPFKTALVVGGDAMPRQLHR 258

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++QG+ELI+ TPGRL+DLLSK+E +LDDV MLVLDEVD ML+ GFRDQVMQI +ALS PQ
Sbjct: 259  IQQGVELIVGTPGRLIDLLSKHEIELDDVFMLVLDEVDCMLERGFRDQVMQIYRALSQPQ 318

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            ++M+SATI QE EK+AS + K  I+ISVGK + PN AVKQ  IWVESK KKQKLF+I  S
Sbjct: 319  VLMYSATISQEVEKVASSMAKDIIVISVGKSNRPNIAVKQLAIWVESKQKKQKLFDILTS 378

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HF PP VVFV S++GADLL++AI  TTGLK  SIHG+K M ERR+++ SFL+GE+ V+
Sbjct: 379  KQHFTPPVVVFVGSRLGADLLTEAITITTGLKALSIHGEKSMKERREIMSSFLVGEVPVM 438

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            VATGVL RG+DLL V QVIVFDMPNS++EYVHQ+GRASRLG  GTAI+FLN +++ LF +
Sbjct: 439  VATGVLSRGVDLLSVRQVIVFDMPNSIKEYVHQIGRASRLGEEGTAILFLNEENRNLFPE 498

Query: 1082 FIPLLKSARTSVPRELA 1132
             + +LKS+  ++PRELA
Sbjct: 499  LVEILKSSGAAIPRELA 515


>ref|XP_001763680.1| predicted protein [Physcomitrella patens] gi|162685173|gb|EDQ71570.1|
            predicted protein [Physcomitrella patens]
          Length = 549

 Score =  512 bits (1319), Expect = e-143
 Identities = 243/377 (64%), Positives = 322/377 (85%), Gaps = 1/377 (0%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            F++C+FLPKL  NL  AGY+ PTPVQMQTIPAA+KGRD+LVSA+TGSGKTASFL+PI+ +
Sbjct: 143  FADCKFLPKLQGNLEAAGYETPTPVQMQTIPAALKGRDVLVSAETGSGKTASFLLPIIMR 202

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            C +IR H LS++ +PLAM+LAPTRELCAQVEEQAK + KGLPFKTALVVGGDAMP+QV+R
Sbjct: 203  CCLIRIHGLSEREKPLAMVLAPTRELCAQVEEQAKVLAKGLPFKTALVVGGDAMPQQVHR 262

Query: 362  VKQGIELIIATPGRLVDLLSKNE-FDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNP 538
            +KQG+ELII TPGRL+DLLSK++   L  VC+L LDEVD +L+ GFRDQV+Q+VQAL+ P
Sbjct: 263  IKQGVELIIGTPGRLIDLLSKHDDLTLQGVCILALDEVDCLLESGFRDQVLQLVQALAMP 322

Query: 539  QLMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFK 718
            Q++M+SATI    E+ +S +LK+P++ISVG P  PN AV Q ++WVE+K+KK+KLFEI K
Sbjct: 323  QILMYSATILPAIERFSSSLLKNPLIISVGTPRQPNRAVHQIILWVETKNKKKKLFEILK 382

Query: 719  SGHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSV 898
            S  H++PP VVFVNS++G+DLL++AI+  TG++  S+HG+K + +RR+ L++FLMGE+ V
Sbjct: 383  SRVHYRPPVVVFVNSRMGSDLLAEAIRTVTGIQARSLHGEKSIKDRRETLKNFLMGEIPV 442

Query: 899  VVATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFK 1078
            +VATGVLGRGLDLL+V+QVI+FD P+S++EY+H +GRASRL   G+A+VF+N++ KALFK
Sbjct: 443  IVATGVLGRGLDLLRVTQVIIFDFPSSIEEYIHMIGRASRLSNAGSAMVFVNDESKALFK 502

Query: 1079 DFIPLLKSARTSVPREL 1129
            + + LLK++RT VPREL
Sbjct: 503  ELVALLKASRTVVPREL 519


>ref|XP_006446872.1| hypothetical protein CICLE_v10017882mg [Citrus clementina]
            gi|557549483|gb|ESR60112.1| hypothetical protein
            CICLE_v10017882mg [Citrus clementina]
          Length = 533

 Score =  511 bits (1315), Expect = e-142
 Identities = 245/376 (65%), Positives = 311/376 (82%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            FS+C    KL +N+  AGYD+PTPVQMQ IP+A+ G+ LLVSA+TGSGKTASFL+P++S+
Sbjct: 137  FSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQ 196

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            CA IR H   +Q  PLAM+L PTRELC QVEEQAK +GKGLPFKTALVVGGDAM RQVYR
Sbjct: 197  CANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYR 256

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++QG+ELI+ TPGRL+DLL K++ +LDD+ M VLDEVD MLQ GFRDQVMQI +ALS PQ
Sbjct: 257  IQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRALSLPQ 316

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            ++M+SATI QE EKM+S I K  +++SVGKP++PN AVKQ  IWVES  KKQKLF+I  S
Sbjct: 317  ILMYSATISQEVEKMSSSISKDIVVVSVGKPNMPNKAVKQLAIWVESNKKKQKLFDILMS 376

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HF PPAVV+V S++GADLLS+AI  TTG+K  SIHG+KPM ERR++++S L+GE+ V+
Sbjct: 377  KQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSLLVGEVPVI 436

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            VATG+LGRG++LL V QVI+FDMPNS++EYVHQ+GRAS++G  GTAIVF+N ++K LF++
Sbjct: 437  VATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQE 496

Query: 1082 FIPLLKSARTSVPREL 1129
             + +LKS+   +PREL
Sbjct: 497  LVDILKSSGAGIPREL 512


>ref|XP_006468943.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform X3
            [Citrus sinensis]
          Length = 472

 Score =  509 bits (1312), Expect = e-142
 Identities = 244/376 (64%), Positives = 311/376 (82%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            FS+C    KL +N+  AGYD+PTPVQMQ IP+A+ G+ LLVSA+TGSGKTASFL+P++S+
Sbjct: 76   FSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQ 135

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            CA IR H   +Q  PLAM+L PTRELC QVEEQAK +GKGLPFKTALVVGGDAM RQVYR
Sbjct: 136  CANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYR 195

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++QG+ELI+ TPGRL+DLL K++ +LDD+ M VLDEVD MLQ GFRDQVMQI +A+S PQ
Sbjct: 196  IQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLPQ 255

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            ++M+SATI QE EKM+S I K  +++SVGKP++PN AVKQ  IWVES  KKQKLF+I  S
Sbjct: 256  ILMYSATISQEVEKMSSSISKDIVVVSVGKPNMPNKAVKQLAIWVESNKKKQKLFDILMS 315

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HF PPAVV+V S++GADLLS+AI  TTG+K  SIHG+KPM ERR++++SFL+GE+ V+
Sbjct: 316  KQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVI 375

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            VATG+LGRG++LL V  VI+FDMPNS++EYVHQ+GRAS++G  GTAIVF+N ++K LF++
Sbjct: 376  VATGILGRGVELLGVRLVIIFDMPNSIKEYVHQIGRASQMGEEGTAIVFVNEENKNLFQE 435

Query: 1082 FIPLLKSARTSVPREL 1129
             + +LKS+   +PREL
Sbjct: 436  LVDILKSSGAGIPREL 451


>ref|XP_006468941.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform X1
            [Citrus sinensis]
          Length = 533

 Score =  509 bits (1312), Expect = e-142
 Identities = 244/376 (64%), Positives = 311/376 (82%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            FS+C    KL +N+  AGYD+PTPVQMQ IP+A+ G+ LLVSA+TGSGKTASFL+P++S+
Sbjct: 137  FSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQ 196

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            CA IR H   +Q  PLAM+L PTRELC QVEEQAK +GKGLPFKTALVVGGDAM RQVYR
Sbjct: 197  CANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYR 256

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++QG+ELI+ TPGRL+DLL K++ +LDD+ M VLDEVD MLQ GFRDQVMQI +A+S PQ
Sbjct: 257  IQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLPQ 316

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            ++M+SATI QE EKM+S I K  +++SVGKP++PN AVKQ  IWVES  KKQKLF+I  S
Sbjct: 317  ILMYSATISQEVEKMSSSISKDIVVVSVGKPNMPNKAVKQLAIWVESNKKKQKLFDILMS 376

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HF PPAVV+V S++GADLLS+AI  TTG+K  SIHG+KPM ERR++++SFL+GE+ V+
Sbjct: 377  KQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVI 436

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            VATG+LGRG++LL V  VI+FDMPNS++EYVHQ+GRAS++G  GTAIVF+N ++K LF++
Sbjct: 437  VATGILGRGVELLGVRLVIIFDMPNSIKEYVHQIGRASQMGEEGTAIVFVNEENKNLFQE 496

Query: 1082 FIPLLKSARTSVPREL 1129
             + +LKS+   +PREL
Sbjct: 497  LVDILKSSGAGIPREL 512


>ref|XP_004951531.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform X1
            [Setaria italica] gi|514708419|ref|XP_004951532.1|
            PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like
            isoform X2 [Setaria italica]
          Length = 539

 Score =  501 bits (1291), Expect = e-139
 Identities = 247/377 (65%), Positives = 307/377 (81%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            FS+C    KL  NL TAGY +PTPVQMQ IPA+M  R LLVSADTGSGKTASFLIPI++ 
Sbjct: 139  FSSCGLPEKLVHNLETAGYCMPTPVQMQVIPASMSNRSLLVSADTGSGKTASFLIPIIAH 198

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            C+ +R+ + + +  PLA++LAPTRELC QVEEQAK +GKGLPFKTALVVGGD + +Q+YR
Sbjct: 199  CSQVRSQECTSKRGPLAIVLAPTRELCLQVEEQAKVLGKGLPFKTALVVGGDPLAQQIYR 258

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++ GIELI+ +PGRL+DLL K+  DL DV + VLDEVD +LQ GFRDQ +QI Q+LSNPQ
Sbjct: 259  IENGIELIVGSPGRLIDLLMKHNVDLTDVSVFVLDEVDCLLQRGFRDQALQIFQSLSNPQ 318

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            +MMFSAT+  E EKM++ + K+ I IS G PS PN +VKQ VIWVESK KKQK+FEI KS
Sbjct: 319  VMMFSATLHSEVEKMSNSLAKAVIRISCGNPSRPNKSVKQVVIWVESKKKKQKIFEIMKS 378

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HFKPPAVVFV+S++GADLLS+AI   TGL+V SIHG+K M+ERR+ L+ FL GE+SVV
Sbjct: 379  KQHFKPPAVVFVSSRVGADLLSEAITVATGLEVVSIHGEKTMNERRESLRRFLTGEVSVV 438

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            V+TGVLGRG+DLLKV QVI+FD+PNS+ EY+HQVGRASR+G  G AIVF+N +D+ +FK+
Sbjct: 439  VSTGVLGRGMDLLKVRQVILFDIPNSIDEYIHQVGRASRMGEEGMAIVFVNEEDRRIFKE 498

Query: 1082 FIPLLKSARTSVPRELA 1132
             +P+LK+A   VPRELA
Sbjct: 499  LVPVLKTAGAPVPRELA 515


>ref|XP_006468942.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform X2
            [Citrus sinensis]
          Length = 533

 Score =  501 bits (1290), Expect = e-139
 Identities = 240/368 (65%), Positives = 306/368 (83%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            FS+C    KL +N+  AGYD+PTPVQMQ IP+A+ G+ LLVSA+TGSGKTASFL+P++S+
Sbjct: 137  FSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQ 196

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            CA IR H   +Q  PLAM+L PTRELC QVEEQAK +GKGLPFKTALVVGGDAM RQVYR
Sbjct: 197  CANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYR 256

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++QG+ELI+ TPGRL+DLL K++ +LDD+ M VLDEVD MLQ GFRDQVMQI +A+S PQ
Sbjct: 257  IQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLPQ 316

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            ++M+SATI QE EKM+S I K  +++SVGKP++PN AVKQ  IWVES  KKQKLF+I  S
Sbjct: 317  ILMYSATISQEVEKMSSSISKDIVVVSVGKPNMPNKAVKQLAIWVESNKKKQKLFDILMS 376

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HF PPAVV+V S++GADLLS+AI  TTG+K  SIHG+KPM ERR++++SFL+GE+ V+
Sbjct: 377  KQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVI 436

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            VATG+LGRG++LL V  VI+FDMPNS++EYVHQ+GRAS++G  GTAIVF+N ++K LF++
Sbjct: 437  VATGILGRGVELLGVRLVIIFDMPNSIKEYVHQIGRASQMGEEGTAIVFVNEENKNLFQE 496

Query: 1082 FIPLLKSA 1105
             + +LKS+
Sbjct: 497  LVDILKSS 504


>ref|XP_006852211.1| hypothetical protein AMTR_s00049p00131010 [Amborella trichopoda]
            gi|548855815|gb|ERN13678.1| hypothetical protein
            AMTR_s00049p00131010 [Amborella trichopoda]
          Length = 535

 Score =  501 bits (1289), Expect = e-139
 Identities = 247/377 (65%), Positives = 310/377 (82%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            FS+C    KL +NL + GYDIPTP+QMQ IPAA+ GR+LLV A TGSGKTAS+LIPI+SK
Sbjct: 139  FSDCNLPQKLQDNLESLGYDIPTPIQMQVIPAALLGRNLLVLAQTGSGKTASYLIPIISK 198

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            C  +R  +L DQ RPLA++LAPTRELCAQVEEQAKA GKGLPFKTAL+VGG+ M  Q YR
Sbjct: 199  CYTVRRQRLLDQKRPLAIVLAPTRELCAQVEEQAKAFGKGLPFKTALIVGGNPMASQAYR 258

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            V +GIELI+ATPGRLVDLL K+EF+LD+V  LV+DEVD ML+ GF DQVMQIV+ALS PQ
Sbjct: 259  VGKGIELIVATPGRLVDLLIKHEFELDEVRTLVIDEVDCMLEKGFLDQVMQIVRALSRPQ 318

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            ++M SAT+P+E EK++  + +  ++I+VGK + P+  V+Q VIWVE+K KKQKLF+I KS
Sbjct: 319  IVMISATLPREVEKLSKSMAEDIVVITVGKVNRPSDTVRQVVIWVETKEKKQKLFQILKS 378

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HFKPPAVVFV S+ GADLL++AI+ +TGL+ +SIHG+K M ERR+ L+ FL+GE+SV+
Sbjct: 379  EKHFKPPAVVFVGSRFGADLLAEAIRVSTGLRASSIHGEKGMRERRESLRMFLLGEMSVI 438

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            VATGVLGRG+DL+ V QVI+FDMPNS+ EYVH +GRASRLG  G AIVF+N +DK+LFKD
Sbjct: 439  VATGVLGRGMDLMGVRQVIIFDMPNSVPEYVHLIGRASRLGEAGEAIVFVNEEDKSLFKD 498

Query: 1082 FIPLLKSARTSVPRELA 1132
            F+ +LK +   +PRELA
Sbjct: 499  FVRMLKQSGAIIPRELA 515


>ref|XP_002320399.1| hypothetical protein POPTR_0014s13620g [Populus trichocarpa]
            gi|222861172|gb|EEE98714.1| hypothetical protein
            POPTR_0014s13620g [Populus trichocarpa]
          Length = 524

 Score =  501 bits (1289), Expect = e-139
 Identities = 242/376 (64%), Positives = 308/376 (81%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            FS+C    KL  N++T GYD+PTP+QMQ I AA+ G+ LL SADTGSGKTASFL+P+VS+
Sbjct: 126  FSSCNLPEKLLHNIQTLGYDMPTPIQMQGIAAALTGKSLLASADTGSGKTASFLVPVVSR 185

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            CA  R   +S   +PLAM+L PTRELC QVEEQAK +GKGLPFKTALV+GGDAMPRQ+YR
Sbjct: 186  CATFRHGNISKSKKPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVIGGDAMPRQLYR 245

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++QG+ELI+ TPGRL+DLL+K++ +LDD+ +LVLDEVD MLQ GFRDQVMQI +ALS PQ
Sbjct: 246  IQQGVELIVGTPGRLIDLLAKHDIELDDIMILVLDEVDCMLQQGFRDQVMQIFRALSQPQ 305

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            ++M+SAT+ QE EKMAS + K  I +S+G+P+ P+ AVKQ  IWVESK KKQKLF+I  S
Sbjct: 306  VLMYSATMSQEVEKMASSMAKDLIFVSIGQPNRPSKAVKQLAIWVESKQKKQKLFDILMS 365

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HF PP++V+V S+IGADLLS+AI  TTGLK  SIHG+K M ERR++++SFL+GE+ +V
Sbjct: 366  KQHFLPPSIVYVGSRIGADLLSNAITVTTGLKALSIHGEKSMKERREIMKSFLVGEVPLV 425

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            VATGVLGRG+DLL V QVIVFDMPN ++EYVHQ+GRASR+G  GT+IVF+N +++ LF D
Sbjct: 426  VATGVLGRGVDLLGVRQVIVFDMPNCIKEYVHQIGRASRMGEDGTSIVFVNEENRNLFPD 485

Query: 1082 FIPLLKSARTSVPREL 1129
             + +LKS+   +PREL
Sbjct: 486  LVEVLKSSGAVIPREL 501


>ref|XP_004303761.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform 2
            [Fragaria vesca subsp. vesca]
          Length = 517

 Score =  496 bits (1276), Expect = e-138
 Identities = 244/376 (64%), Positives = 307/376 (81%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            F++C    KL +N+  AGY++PTPVQMQ IPAA+ G++LLVSADTGSGKTASFLIPIVS 
Sbjct: 124  FASCNLPQKLVQNIEAAGYEMPTPVQMQAIPAALSGKNLLVSADTGSGKTASFLIPIVSC 183

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            C+  R   L+ + +PLAM+L PTRELC QVEEQAK +GKGLPFKTALVVGGDAMPRQ++R
Sbjct: 184  CSHFRFEHLTGEKKPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMPRQLFR 243

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++QG+ELI+ TPGRL+DLL+ ++ +L+DV + VLDEVD MLQ GFRDQVMQI +ALS PQ
Sbjct: 244  IQQGVELIVGTPGRLIDLLANHDIELEDVRIFVLDEVDCMLQRGFRDQVMQIFRALSQPQ 303

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            ++++SAT  Q+ EKM S + K   +ISVGKP+ PN AVKQ  IWVESK KKQKLF+I  S
Sbjct: 304  VLLYSATTSQDIEKMVSSMSKDVTVISVGKPNRPNKAVKQVPIWVESKQKKQKLFDILMS 363

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HF PPAVV+V S++GADLLS+AI+ TTG+K  SIHG+K M ERR V++SFL+G++ V+
Sbjct: 364  KQHFMPPAVVYVASRLGADLLSNAIRVTTGVKALSIHGEKSMKERRDVMKSFLVGDVPVI 423

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            VATGVLGRGLDLL V QVIVFDMPNS+ EYVHQ+GRASRLG  GTAIVF+  ++K LF +
Sbjct: 424  VATGVLGRGLDLLSVRQVIVFDMPNSINEYVHQIGRASRLGEEGTAIVFVCQENKKLFPE 483

Query: 1082 FIPLLKSARTSVPREL 1129
             + +L+S+  ++PREL
Sbjct: 484  LVEMLRSSGAAIPREL 499


>ref|XP_004303760.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform 1
            [Fragaria vesca subsp. vesca]
          Length = 526

 Score =  496 bits (1276), Expect = e-138
 Identities = 244/376 (64%), Positives = 307/376 (81%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            F++C    KL +N+  AGY++PTPVQMQ IPAA+ G++LLVSADTGSGKTASFLIPIVS 
Sbjct: 133  FASCNLPQKLVQNIEAAGYEMPTPVQMQAIPAALSGKNLLVSADTGSGKTASFLIPIVSC 192

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            C+  R   L+ + +PLAM+L PTRELC QVEEQAK +GKGLPFKTALVVGGDAMPRQ++R
Sbjct: 193  CSHFRFEHLTGEKKPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMPRQLFR 252

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++QG+ELI+ TPGRL+DLL+ ++ +L+DV + VLDEVD MLQ GFRDQVMQI +ALS PQ
Sbjct: 253  IQQGVELIVGTPGRLIDLLANHDIELEDVRIFVLDEVDCMLQRGFRDQVMQIFRALSQPQ 312

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            ++++SAT  Q+ EKM S + K   +ISVGKP+ PN AVKQ  IWVESK KKQKLF+I  S
Sbjct: 313  VLLYSATTSQDIEKMVSSMSKDVTVISVGKPNRPNKAVKQVPIWVESKQKKQKLFDILMS 372

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HF PPAVV+V S++GADLLS+AI+ TTG+K  SIHG+K M ERR V++SFL+G++ V+
Sbjct: 373  KQHFMPPAVVYVASRLGADLLSNAIRVTTGVKALSIHGEKSMKERRDVMKSFLVGDVPVI 432

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            VATGVLGRGLDLL V QVIVFDMPNS+ EYVHQ+GRASRLG  GTAIVF+  ++K LF +
Sbjct: 433  VATGVLGRGLDLLSVRQVIVFDMPNSINEYVHQIGRASRLGEEGTAIVFVCQENKKLFPE 492

Query: 1082 FIPLLKSARTSVPREL 1129
             + +L+S+  ++PREL
Sbjct: 493  LVEMLRSSGAAIPREL 508


>sp|Q0E2Z7.2|RH41_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 41
            gi|46390396|dbj|BAD15860.1| putative DEAD box [Oryza
            sativa Japonica Group] gi|215701515|dbj|BAG92939.1|
            unnamed protein product [Oryza sativa Japonica Group]
            gi|215767715|dbj|BAG99943.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 536

 Score =  493 bits (1270), Expect = e-137
 Identities = 246/377 (65%), Positives = 305/377 (80%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            FS+     KL  NL  AGY +PTPVQMQ IP+++  R LLVSADTGSGKTASFL+PI++ 
Sbjct: 139  FSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICNRSLLVSADTGSGKTASFLVPIIAH 198

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            C+ +R+ + +D+  PLA++LAPTRELC QVEEQAK +GKGLPFKTALVVGGD + +Q+YR
Sbjct: 199  CSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKVLGKGLPFKTALVVGGDPLAQQIYR 258

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++ GIELI+ TPGRL+DLL K+  DL+ V + VLDEVD +L+ GFRDQVMQI QALS+PQ
Sbjct: 259  IENGIELIVGTPGRLIDLLMKHNVDLNKVDVFVLDEVDCLLERGFRDQVMQIFQALSHPQ 318

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            +MMFSAT+  E EKM++ + K+ I IS G PS PN +VKQ VIWVESK KKQK+FEI  S
Sbjct: 319  VMMFSATVNSEVEKMSNSLAKNAIHISCGNPSRPNKSVKQVVIWVESKQKKQKIFEIMTS 378

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HFKPPAVVFV+S+IGADLLS+AI   TGLKV SIHGDK M+ERR+ L+ FL GE+SVV
Sbjct: 379  KQHFKPPAVVFVSSRIGADLLSEAITVATGLKVVSIHGDKTMNERRESLRRFLTGEVSVV 438

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            V TGVLGRG+DLLKV QVI+FDMPNS+ EYVHQVGRASR+G+ G AIVF+N +D+ LF++
Sbjct: 439  VCTGVLGRGMDLLKVRQVILFDMPNSIDEYVHQVGRASRMGVEGMAIVFVNEEDRNLFRE 498

Query: 1082 FIPLLKSARTSVPRELA 1132
             + +LK+A   +PRELA
Sbjct: 499  LVQILKTAGAPIPRELA 515


>gb|EEE56516.1| hypothetical protein OsJ_05798 [Oryza sativa Japonica Group]
          Length = 648

 Score =  493 bits (1270), Expect = e-137
 Identities = 246/377 (65%), Positives = 305/377 (80%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            FS+     KL  NL  AGY +PTPVQMQ IP+++  R LLVSADTGSGKTASFL+PI++ 
Sbjct: 184  FSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICNRSLLVSADTGSGKTASFLVPIIAH 243

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            C+ +R+ + +D+  PLA++LAPTRELC QVEEQAK +GKGLPFKTALVVGGD + +Q+YR
Sbjct: 244  CSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKVLGKGLPFKTALVVGGDPLAQQIYR 303

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++ GIELI+ TPGRL+DLL K+  DL+ V + VLDEVD +L+ GFRDQVMQI QALS+PQ
Sbjct: 304  IENGIELIVGTPGRLIDLLMKHNVDLNKVDVFVLDEVDCLLERGFRDQVMQIFQALSHPQ 363

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            +MMFSAT+  E EKM++ + K+ I IS G PS PN +VKQ VIWVESK KKQK+FEI  S
Sbjct: 364  VMMFSATVNSEVEKMSNSLAKNAIHISCGNPSRPNKSVKQVVIWVESKQKKQKIFEIMTS 423

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HFKPPAVVFV+S+IGADLLS+AI   TGLKV SIHGDK M+ERR+ L+ FL GE+SVV
Sbjct: 424  KQHFKPPAVVFVSSRIGADLLSEAITVATGLKVVSIHGDKTMNERRESLRRFLTGEVSVV 483

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            V TGVLGRG+DLLKV QVI+FDMPNS+ EYVHQVGRASR+G+ G AIVF+N +D+ LF++
Sbjct: 484  VCTGVLGRGMDLLKVRQVILFDMPNSIDEYVHQVGRASRMGVEGMAIVFVNEEDRNLFRE 543

Query: 1082 FIPLLKSARTSVPRELA 1132
             + +LK+A   +PRELA
Sbjct: 544  LVQILKTAGAPIPRELA 560


>gb|EEC72698.1| hypothetical protein OsI_06281 [Oryza sativa Indica Group]
          Length = 648

 Score =  493 bits (1270), Expect = e-137
 Identities = 246/377 (65%), Positives = 305/377 (80%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            FS+     KL  NL  AGY +PTPVQMQ IP+++  R LLVSADTGSGKTASFL+PI++ 
Sbjct: 184  FSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICNRSLLVSADTGSGKTASFLVPIIAH 243

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            C+ +R+ + +D+  PLA++LAPTRELC QVEEQAK +GKGLPFKTALVVGGD + +Q+YR
Sbjct: 244  CSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKVLGKGLPFKTALVVGGDPLAQQIYR 303

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++ GIELI+ TPGRL+DLL K+  DL+ V + VLDEVD +L+ GFRDQVMQI QALS+PQ
Sbjct: 304  IENGIELIVGTPGRLIDLLMKHNVDLNKVDVFVLDEVDCLLERGFRDQVMQIFQALSHPQ 363

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            +MMFSAT+  E EKM++ + K+ I IS G PS PN +VKQ VIWVESK KKQK+FEI  S
Sbjct: 364  VMMFSATVNSEVEKMSNSLAKNAIHISCGNPSRPNKSVKQVVIWVESKQKKQKIFEIMTS 423

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HFKPPAVVFV+S+IGADLLS+AI   TGLKV SIHGDK M+ERR+ L+ FL GE+SVV
Sbjct: 424  KQHFKPPAVVFVSSRIGADLLSEAITVATGLKVVSIHGDKTMNERRESLRRFLTGEVSVV 483

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            V TGVLGRG+DLLKV QVI+FDMPNS+ EYVHQVGRASR+G+ G AIVF+N +D+ LF++
Sbjct: 484  VCTGVLGRGMDLLKVRQVILFDMPNSIDEYVHQVGRASRMGVEGMAIVFVNEEDRNLFRE 543

Query: 1082 FIPLLKSARTSVPRELA 1132
             + +LK+A   +PRELA
Sbjct: 544  LVQILKTAGAPIPRELA 560


>ref|XP_006354193.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform X1
            [Solanum tuberosum] gi|565375350|ref|XP_006354194.1|
            PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like
            isoform X2 [Solanum tuberosum]
          Length = 527

 Score =  492 bits (1266), Expect = e-136
 Identities = 238/377 (63%), Positives = 306/377 (81%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            F++C+   KL EN+  AGY++PTPVQMQ IPAA+  + LLVSA+TGSGKT SFLIPIVS+
Sbjct: 129  FASCKLPQKLLENIEVAGYEMPTPVQMQAIPAALARQSLLVSAETGSGKTGSFLIPIVSQ 188

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            CA        +Q +PLAM+L PTRELC QVE+QAK +GKGLPFKTALVVGGDAM  Q++R
Sbjct: 189  CAKFNEEHFQNQQQPLAMVLTPTRELCIQVEDQAKVLGKGLPFKTALVVGGDAMAGQLHR 248

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++QG+ LI+ TPGRL+DLL+K+E +LD + +LVLDEVD MLQ GFR+QVMQI  ALS PQ
Sbjct: 249  IQQGVSLIVGTPGRLIDLLTKHEIELDTISILVLDEVDCMLQRGFREQVMQIFTALSQPQ 308

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            ++M+SATIP++ EKMAS + K   +ISVGKP+ PN AVKQ  IWV+SK KKQKLF+I  S
Sbjct: 309  VLMYSATIPKDVEKMASSMAKKVTVISVGKPNKPNQAVKQLAIWVDSKRKKQKLFDILMS 368

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              H+KPP ++FV+S++GADLLS+AI  +TGLK  SIHG+K M +RR++++SFL+GE+ V+
Sbjct: 369  KQHYKPPVIIFVDSRLGADLLSEAITVSTGLKALSIHGEKSMKDRREIVRSFLVGEIPVI 428

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            VATGVLGRG+DLL V QVIVFDMPNS++EYVHQVGRASR+G  GT+IVF+N ++K LF  
Sbjct: 429  VATGVLGRGIDLLTVKQVIVFDMPNSIKEYVHQVGRASRMGEEGTSIVFVNEENKKLFPQ 488

Query: 1082 FIPLLKSARTSVPRELA 1132
             +  LK++  ++PRELA
Sbjct: 489  LVEALKTSGAAIPRELA 505


>ref|XP_006299543.1| hypothetical protein CARUB_v10015716mg, partial [Capsella rubella]
            gi|482568252|gb|EOA32441.1| hypothetical protein
            CARUB_v10015716mg, partial [Capsella rubella]
          Length = 492

 Score =  491 bits (1263), Expect = e-136
 Identities = 238/376 (63%), Positives = 301/376 (80%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            F++C   PKL  NL TAGYD PTP+QMQ IPAA+ G+ LL SADTGSGKTASFL+PI+S+
Sbjct: 100  FTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALSGKSLLASADTGSGKTASFLVPIISR 159

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            C   R+   SDQ  P+AM+LAPTRELC QVE+QAK +GKGLPFKTALVVGGD M  Q+YR
Sbjct: 160  CTTYRSEYPSDQRSPMAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYR 219

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++QG+ELII TPGR+VDLL+K+  +LD++   VLDEVD MLQ GFRDQVMQI QALS PQ
Sbjct: 220  IQQGVELIIGTPGRVVDLLAKHAIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSEPQ 279

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            +++FSAT+  E +++   + K  IL+S+GK + PN AV Q  IWV++K KKQKLFEI +S
Sbjct: 280  VLLFSATVSNEVKRVGGSLAKEIILVSIGKANKPNKAVNQLAIWVDAKQKKQKLFEILRS 339

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HFKPPAVV+V+S++GADLL++AI   TG+K  SIHG+KPM ERR V+ SFL GE+SV+
Sbjct: 340  QKHFKPPAVVYVSSRVGADLLANAITVVTGIKALSIHGEKPMKERRDVMGSFLSGEVSVL 399

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            V+TGVLGRG+DLL V QVIVFDMPN+++EY+H +GRASR+G  GTAI+F+N DD+ LF D
Sbjct: 400  VSTGVLGRGVDLLVVRQVIVFDMPNTIREYIHVIGRASRMGEKGTAILFVNEDDRNLFPD 459

Query: 1082 FIPLLKSARTSVPREL 1129
             I  LKS+  ++P+EL
Sbjct: 460  LIAALKSSGAAIPKEL 475


>ref|XP_002453503.1| hypothetical protein SORBIDRAFT_04g006980 [Sorghum bicolor]
            gi|241933334|gb|EES06479.1| hypothetical protein
            SORBIDRAFT_04g006980 [Sorghum bicolor]
          Length = 539

 Score =  490 bits (1262), Expect = e-136
 Identities = 242/377 (64%), Positives = 301/377 (79%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            FS C    KL  NL TAGY +PTPVQMQ IPA+M  R LLVSADTGSGKTASFLIPI++ 
Sbjct: 139  FSACGLPEKLVHNLETAGYCMPTPVQMQVIPASMSNRSLLVSADTGSGKTASFLIPIIAH 198

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            C+ +R+ + +    PLA++LAPTRELC QVEEQAK +GKGLPFKTALVVGGD +P+Q+YR
Sbjct: 199  CSQVRSQESTSNQGPLAIVLAPTRELCLQVEEQAKVLGKGLPFKTALVVGGDPLPQQIYR 258

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++ GIELI+ TPGRL+DLL K+  DL  V + VLDEVD +L+ GFRDQ MQI Q+LS PQ
Sbjct: 259  IENGIELIVGTPGRLIDLLMKHNVDLTYVSVFVLDEVDCLLERGFRDQAMQIFQSLSQPQ 318

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            +MMFSAT+  E EKM++ + K+ I IS G P+ P  +VKQ VIWVESK KKQK+FEI KS
Sbjct: 319  VMMFSATLHSEVEKMSNSLAKNVISISCGNPNRPTKSVKQVVIWVESKKKKQKIFEIMKS 378

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HFKPPAVVFV+S++GADLLS+AI   TGL+V SIHG+K M ERR+ L+ FL GE+SVV
Sbjct: 379  KQHFKPPAVVFVSSRVGADLLSEAITVATGLEVVSIHGEKTMKERRENLRRFLTGEVSVV 438

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            V+TGVLGRG+DLLKV QVI+FD+PNS+ EY+HQVGRASR+G  G A+VF+N +D+ +FK+
Sbjct: 439  VSTGVLGRGMDLLKVRQVILFDIPNSIDEYIHQVGRASRMGEEGMAVVFVNEEDRRIFKE 498

Query: 1082 FIPLLKSARTSVPRELA 1132
             + +LK+A   +PRELA
Sbjct: 499  LVQVLKTAGAPIPRELA 515


>ref|XP_006647045.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Oryza
            brachyantha]
          Length = 539

 Score =  489 bits (1258), Expect = e-135
 Identities = 242/377 (64%), Positives = 303/377 (80%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            FS+     +L  NL  AGY +PTPVQMQ IPA++  R LLVSADTGSGKTASFL+PI++ 
Sbjct: 139  FSSSGLPERLVLNLEAAGYVMPTPVQMQVIPASICNRSLLVSADTGSGKTASFLVPIIAH 198

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            C+  R H+ +D+  PLA++LAPTRELC QVEEQAK + KGLPFKTALVVGGD + +Q+YR
Sbjct: 199  CSQARLHECTDKQGPLAIVLAPTRELCLQVEEQAKVLAKGLPFKTALVVGGDPLAQQIYR 258

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++ GIELI+ TPGRL+DLL K+  DL++V + VLDEVD +L+ GFRDQ MQI QALS+PQ
Sbjct: 259  IENGIELIVGTPGRLIDLLMKHNADLNNVSIFVLDEVDCLLERGFRDQAMQIFQALSHPQ 318

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            +MMFSAT+  E EKM++ + ++ I IS G PS PN +VKQ VIWVESK KKQKLFEI  S
Sbjct: 319  VMMFSATVNSEVEKMSNSLARNVIHISCGNPSKPNNSVKQVVIWVESKQKKQKLFEIMTS 378

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              HFKPPAVVFVNS++GADLLS+ I   TGL+V SIHGDK M+ERR+ L+ FL GE+SVV
Sbjct: 379  KQHFKPPAVVFVNSRVGADLLSEVITVATGLEVLSIHGDKTMNERRESLRRFLKGEVSVV 438

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            V TGVLGRG+DLLKV QVI+FDMPNS+ EYVHQVGRASR+G+ G AIVF+N++D+ LF++
Sbjct: 439  VCTGVLGRGMDLLKVRQVILFDMPNSINEYVHQVGRASRMGVEGMAIVFVNDEDRNLFRE 498

Query: 1082 FIPLLKSARTSVPRELA 1132
             + ++K+A   +PRELA
Sbjct: 499  LVQVMKTAGAPIPRELA 515


>ref|XP_004228633.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Solanum
            lycopersicum]
          Length = 527

 Score =  488 bits (1257), Expect = e-135
 Identities = 237/377 (62%), Positives = 305/377 (80%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            F++C+   KL EN+  AGY++PTPVQMQ IPAA+  + LLVSA+TGSGKT SFLIPIVS+
Sbjct: 129  FASCKLPQKLLENIEVAGYEMPTPVQMQAIPAALARQSLLVSAETGSGKTGSFLIPIVSQ 188

Query: 182  CAMIRTHKLSDQNRPLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVYR 361
            CA        +Q +PLAM+L PTRELC QVE+QAK +GKGLPFKTALVVGGDAM  Q++R
Sbjct: 189  CAKFNEEHFPNQQQPLAMVLTPTRELCIQVEDQAKVLGKGLPFKTALVVGGDAMAGQLHR 248

Query: 362  VKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNPQ 541
            ++QG+ LI+ TPGRL+DLL+K+E +LD + +LVLDEVD MLQ GFR+QVMQI  ALS PQ
Sbjct: 249  IQQGVSLIVGTPGRLIDLLTKHEIELDTISILVLDEVDCMLQRGFREQVMQIFTALSQPQ 308

Query: 542  LMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFKS 721
            ++M+SATIP++ EKMAS + K   +ISVGKP+ PN +VKQ  IWV+SK KKQKLF+I  S
Sbjct: 309  VLMYSATIPKDVEKMASSMAKKVTVISVGKPNKPNQSVKQLAIWVDSKRKKQKLFDILMS 368

Query: 722  GHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSVV 901
              H+KPP +VFV+S++GADLLS+AI  +TGLK  SIHG+K M +RR++++SFL+GE+ V+
Sbjct: 369  KQHYKPPVIVFVDSRLGADLLSEAITVSTGLKALSIHGEKSMKDRREIVRSFLVGEIPVI 428

Query: 902  VATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFKD 1081
            VATGVL RG+DLL V QVIVFDMPNS++EYVHQVGRASR+G  GT+IVF+N ++K LF  
Sbjct: 429  VATGVLSRGIDLLTVKQVIVFDMPNSIKEYVHQVGRASRMGEEGTSIVFVNEENKKLFPQ 488

Query: 1082 FIPLLKSARTSVPRELA 1132
             +  LK++  ++PRELA
Sbjct: 489  LVEALKTSGAAIPRELA 505


>ref|NP_974208.1| DEAD-box ATP-dependent RNA helicase 41 [Arabidopsis thaliana]
            gi|79295464|ref|NP_001030621.1| DEAD-box ATP-dependent
            RNA helicase 41 [Arabidopsis thaliana]
            gi|108861894|sp|Q3EBD3.1|RH41_ARATH RecName:
            Full=DEAD-box ATP-dependent RNA helicase 41
            gi|332640235|gb|AEE73756.1| DEAD-box ATP-dependent RNA
            helicase 41 [Arabidopsis thaliana]
            gi|332640237|gb|AEE73758.1| DEAD-box ATP-dependent RNA
            helicase 41 [Arabidopsis thaliana]
          Length = 505

 Score =  488 bits (1257), Expect = e-135
 Identities = 240/377 (63%), Positives = 302/377 (80%), Gaps = 1/377 (0%)
 Frame = +2

Query: 2    FSNCRFLPKLNENLRTAGYDIPTPVQMQTIPAAMKGRDLLVSADTGSGKTASFLIPIVSK 181
            F++C   PKL  NL TAGYD PTP+QMQ IPAA+ G+ LL SADTGSGKTASFL+PI+S+
Sbjct: 112  FTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISR 171

Query: 182  CAMIRTHKLSDQNR-PLAMILAPTRELCAQVEEQAKAIGKGLPFKTALVVGGDAMPRQVY 358
            C    +   SDQ R PLAM+LAPTRELC QVE+QAK +GKGLPFKTALVVGGD M  Q+Y
Sbjct: 172  CTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLY 231

Query: 359  RVKQGIELIIATPGRLVDLLSKNEFDLDDVCMLVLDEVDSMLQHGFRDQVMQIVQALSNP 538
            R++QG+ELII TPGR+VDLLSK+  +LD++   VLDEVD MLQ GFRDQVMQI QALS P
Sbjct: 232  RIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQP 291

Query: 539  QLMMFSATIPQETEKMASRILKSPILISVGKPSVPNCAVKQTVIWVESKSKKQKLFEIFK 718
            Q+++FSATI +E EK+   + K  IL+S+G P+ PN AV Q  IWV++K KKQKLF+I +
Sbjct: 292  QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILR 351

Query: 719  SGHHFKPPAVVFVNSKIGADLLSDAIKCTTGLKVASIHGDKPMSERRQVLQSFLMGELSV 898
            S +HFKPPAVV+V+S++GADLL++AI   TG+K  SIHG+KPM ERR V+ SFL GE+ V
Sbjct: 352  SQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPV 411

Query: 899  VVATGVLGRGLDLLKVSQVIVFDMPNSLQEYVHQVGRASRLGIPGTAIVFLNNDDKALFK 1078
            +V+TGVLGRG+DLL V QVIVFDMP++++EY+H +GRASR+G  GTAIVF+N DD+ LF 
Sbjct: 412  LVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFP 471

Query: 1079 DFIPLLKSARTSVPREL 1129
            D +  LKS+  ++P+EL
Sbjct: 472  DLVAALKSSGAAIPKEL 488


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