BLASTX nr result
ID: Ephedra26_contig00009019
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00009019
(847 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY13201.1| RNA-binding family protein [Theobroma cacao] 133 7e-29
gb|EMJ12834.1| hypothetical protein PRUPE_ppa005857mg [Prunus pe... 130 6e-28
ref|XP_006451727.1| hypothetical protein CICLE_v10008394mg [Citr... 130 8e-28
ref|XP_006485663.1| PREDICTED: heterogeneous nuclear ribonucleop... 129 1e-27
ref|XP_003541062.1| PREDICTED: heterogeneous nuclear ribonucleop... 128 2e-27
ref|XP_001764798.1| predicted protein [Physcomitrella patens] gi... 127 5e-27
ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207... 126 1e-26
gb|EXC18503.1| Heterogeneous nuclear ribonucleoprotein A0 [Morus... 125 1e-26
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248... 125 1e-26
ref|XP_006582133.1| PREDICTED: heterogeneous nuclear ribonucleop... 125 3e-26
gb|EMJ12722.1| hypothetical protein PRUPE_ppa008108mg [Prunus pe... 125 3e-26
ref|NP_188119.1| RNA recognition motif-containing protein [Arabi... 124 3e-26
ref|XP_006392809.1| hypothetical protein EUTSA_v10011518mg [Eutr... 124 4e-26
ref|XP_006852453.1| hypothetical protein AMTR_s00021p00110500 [A... 123 1e-25
ref|XP_002882908.1| hypothetical protein ARALYDRAFT_478927 [Arab... 123 1e-25
gb|ESW05187.1| hypothetical protein PHAVU_011G159400g [Phaseolus... 122 1e-25
gb|AGV54510.1| polyadenylate-binding protein, cytoplasmic and nu... 122 1e-25
gb|AGV54416.1| polyadenylate-binding protein [Phaseolus vulgaris] 122 1e-25
ref|XP_004294103.1| PREDICTED: polyadenylate-binding protein 2-l... 122 1e-25
ref|XP_006307615.1| hypothetical protein CARUB_v10009243mg [Caps... 122 2e-25
>gb|EOY13201.1| RNA-binding family protein [Theobroma cacao]
Length = 429
Score = 133 bits (335), Expect = 7e-29
Identities = 73/154 (47%), Positives = 99/154 (64%), Gaps = 3/154 (1%)
Frame = +1
Query: 85 KRKRDQKQ--KEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKI 255
KRK D+ +EP IT +T +D KL+ S DQ ++L+ AV R VL VR +
Sbjct: 9 KRKLDENGIVSTQSEPDPITKLTPQDGRKLIERFSVDQLLDILQDAVSRHVDVLAAVRSV 68
Query: 256 IDADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVD 435
D D ++RK+F+ L +DTT DGL+ F +GE+E+ V DK+TGKS+G+GFVTFKHVD
Sbjct: 69 ADQDPAQRKLFIRGLGWDTTTDGLRSLFSVYGELEEAVVILDKATGKSKGYGFVTFKHVD 128
Query: 436 GALNALRESSKKIDGRTVMCELAEPKGSKDDDKP 537
GAL AL+E SKKIDGR + +LA S ++ P
Sbjct: 129 GALLALKEPSKKIDGRVTVTQLAAAGNSGTNNNP 162
Score = 69.7 bits (169), Expect = 1e-09
Identities = 36/80 (45%), Positives = 48/80 (60%)
Frame = +1
Query: 265 DASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGAL 444
D RKI+V ++ +D D L F ++GE+E+ + DK TGKSRGF +K DGA
Sbjct: 164 DVHMRKIYVANVPYDMPADKLLGHFAQYGEIEEGPLGFDKQTGKSRGFALFVYKTADGAQ 223
Query: 445 NALRESSKKIDGRTVMCELA 504
AL E K IDGR + C+LA
Sbjct: 224 AALVEPVKNIDGRQMNCKLA 243
>gb|EMJ12834.1| hypothetical protein PRUPE_ppa005857mg [Prunus persica]
Length = 440
Score = 130 bits (327), Expect = 6e-28
Identities = 72/150 (48%), Positives = 97/150 (64%), Gaps = 2/150 (1%)
Frame = +1
Query: 85 KRKRDQKQKE-GAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKII 258
KRK D+ +P+ I ++ EDA KL+ + DQ ++L+ AV R VL VR I
Sbjct: 6 KRKLDENGVVLDTDPSSIPKLSPEDARKLIERFNPDQLIDILQDAVTRHVDVLDAVRSIA 65
Query: 259 DADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDG 438
D DAS+RK+F+ L +DTT +GL+ F +GE+E+ V DK TGKSRG+GFVTF+HVDG
Sbjct: 66 DLDASQRKLFIRGLGWDTTTEGLRALFSAYGELEEAIVILDKVTGKSRGYGFVTFRHVDG 125
Query: 439 ALNALRESSKKIDGRTVMCELAEPKGSKDD 528
AL AL+E SKKIDGR + +LA S +
Sbjct: 126 ALLALKEPSKKIDGRMTVTQLAAAGNSSSN 155
Score = 72.0 bits (175), Expect = 3e-10
Identities = 57/181 (31%), Positives = 84/181 (46%), Gaps = 10/181 (5%)
Frame = +1
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
AD S RKI+V ++ +D D L F +GE+E+ + DK TGK +G+ +K +GA
Sbjct: 162 ADVSLRKIYVANVPYDMPADKLLAHFSFYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGA 221
Query: 442 LNALRESSKKIDGRTVMCELA--EPKGSKDDDKPEKRRDSFPNPNPNTSSLAGRLSPLRS 615
AL + K I+GR + C+LA KG D + S PN + + LA + S +
Sbjct: 222 QAALVDPVKNIEGRQLTCKLAIDGKKGKPDGPGQGQGPGSGPNAHGDGMGLA-QPSSIAG 280
Query: 616 SYARENGLGGLEFLGPGRALREYSNPRDFG-------GLRDLGTR-DSGLRDFGARDSGL 771
Y G+G G + P G GL +G + +SGL G +GL
Sbjct: 281 QYGGPGGIGSYGGFSGG-----HQGPPPLGHHPLGGPGLSSVGNQVNSGLGAGGGYGAGL 335
Query: 772 G 774
G
Sbjct: 336 G 336
>ref|XP_006451727.1| hypothetical protein CICLE_v10008394mg [Citrus clementina]
gi|567919444|ref|XP_006451728.1| hypothetical protein
CICLE_v10008394mg [Citrus clementina]
gi|557554953|gb|ESR64967.1| hypothetical protein
CICLE_v10008394mg [Citrus clementina]
gi|557554954|gb|ESR64968.1| hypothetical protein
CICLE_v10008394mg [Citrus clementina]
Length = 425
Score = 130 bits (326), Expect = 8e-28
Identities = 68/141 (48%), Positives = 95/141 (67%), Gaps = 1/141 (0%)
Frame = +1
Query: 85 KRKRDQKQKEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKIID 261
KRK D+ ++ +T +DA K+V L+SDQ +VL AV R VL+ VR I D
Sbjct: 6 KRKIDENGAVLSDLESPNRLTQQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIAD 65
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
AD ++RK+F+ L +DTT +GL+ F +GE+E+ V DK+TGKS+G+GF+TFKH+DGA
Sbjct: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
Query: 442 LNALRESSKKIDGRTVMCELA 504
+ AL+E SKKIDGR + LA
Sbjct: 126 MLALKEPSKKIDGRVTVTNLA 146
Score = 66.6 bits (161), Expect = 1e-08
Identities = 35/86 (40%), Positives = 51/86 (59%)
Frame = +1
Query: 265 DASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGAL 444
D S RKIFVG++ D + D L F +GE+E+ + DK TGK +GF +K +GA
Sbjct: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
Query: 445 NALRESSKKIDGRTVMCELAEPKGSK 522
AL + K +DG+ + C LA+ K +K
Sbjct: 220 AALVDPIKTVDGKQLNCRLADNKKAK 245
>ref|XP_006485663.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A1 homolog
isoform X1 [Citrus sinensis]
gi|568864564|ref|XP_006485664.1| PREDICTED:
heterogeneous nuclear ribonucleoproteins A1 homolog
isoform X2 [Citrus sinensis]
Length = 425
Score = 129 bits (325), Expect = 1e-27
Identities = 68/141 (48%), Positives = 95/141 (67%), Gaps = 1/141 (0%)
Frame = +1
Query: 85 KRKRDQKQKEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKIID 261
KRK D+ ++ +T +DA K+V L+SDQ +VL AV R VL+ VR I D
Sbjct: 6 KRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESVRSIAD 65
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
AD ++RK+F+ L +DTT +GL+ F +GE+E+ V DK+TGKS+G+GF+TFKH+DGA
Sbjct: 66 ADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFKHIDGA 125
Query: 442 LNALRESSKKIDGRTVMCELA 504
+ AL+E SKKIDGR + LA
Sbjct: 126 MLALKEPSKKIDGRVTVTNLA 146
Score = 66.6 bits (161), Expect = 1e-08
Identities = 35/86 (40%), Positives = 51/86 (59%)
Frame = +1
Query: 265 DASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGAL 444
D S RKIFVG++ D + D L F +GE+E+ + DK TGK +GF +K +GA
Sbjct: 160 DVSLRKIFVGNVPNDMSADKLLAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQ 219
Query: 445 NALRESSKKIDGRTVMCELAEPKGSK 522
AL + K +DG+ + C LA+ K +K
Sbjct: 220 AALVDPIKTVDGKQLNCRLADNKKAK 245
>ref|XP_003541062.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform X1
[Glycine max] gi|571493430|ref|XP_006592544.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein A3
isoform X2 [Glycine max]
gi|571493432|ref|XP_006592545.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein A3 isoform X3
[Glycine max]
Length = 437
Score = 128 bits (322), Expect = 2e-27
Identities = 66/141 (46%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
Frame = +1
Query: 85 KRKRDQKQKEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKIID 261
KRK D+ + +E ++ DA KL+ ++DQ ++L+ V R P VL VR + D
Sbjct: 6 KRKLDENGFINNDSSEPLKLSPSDARKLIERFTTDQLLDILQDTVARHPDVLAAVRAVSD 65
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
D S+RK+F+ L +DTT DGL+ F +G++E+ V DK+TGKS+G+GFVTF+HVDGA
Sbjct: 66 PDVSQRKLFIRGLGWDTTTDGLRSLFSTYGDLEEAVVILDKATGKSKGYGFVTFRHVDGA 125
Query: 442 LNALRESSKKIDGRTVMCELA 504
L ALRE SK+IDGR + +LA
Sbjct: 126 LLALREPSKRIDGRVTVTQLA 146
Score = 63.2 bits (152), Expect = 1e-07
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 4/163 (2%)
Frame = +1
Query: 265 DASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGAL 444
D + RKI+V ++ D D L F +GE+E+ + DK TGKS+GF +K +GA
Sbjct: 159 DVALRKIYVANVPPDLPADKLLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAK 218
Query: 445 NALRESSKKIDGRTVMCELAEPKGSK----DDDKPEKRRDSFPNPNPNTSSLAGRLSPLR 612
AL + K ++GR + C+LA G + D + + + + + + P
Sbjct: 219 AALIDPMKTVEGRQLSCKLAITDGKQGKRSGPDSGQAHHGNVQHGHGDGVGAGMGIPPNS 278
Query: 613 SSYARENGLGGLEFLGPGRALREYSNPRDFGGLRDLGTRDSGL 741
S + GG GP + Y FGG +G + L
Sbjct: 279 GSGSGPGQYGGPGHYGPTVGMGSYGG---FGGQPPMGNNNHPL 318
>ref|XP_001764798.1| predicted protein [Physcomitrella patens]
gi|162684092|gb|EDQ70497.1| predicted protein
[Physcomitrella patens]
Length = 242
Score = 127 bits (319), Expect = 5e-27
Identities = 80/190 (42%), Positives = 106/190 (55%), Gaps = 5/190 (2%)
Frame = +1
Query: 115 GAEPAEITS--ITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKIIDADASRRKI 285
GA A + + IT ED KLV + +Q ++L+ A + VL E+RK+ D D RKI
Sbjct: 8 GAPAASVPTFVITKEDVKKLVEPFTKEQLMDLLENAALNHADVLHEIRKLADKDPGHRKI 67
Query: 286 FVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGALNALRESS 465
FV L +DTT + LK F + GEVE+ V DK+TGKSRGFGFVTFKH+DGA +L+E S
Sbjct: 68 FVRGLGWDTTTETLKTVFSQFGEVEEGAVIMDKATGKSRGFGFVTFKHMDGAQRSLKEPS 127
Query: 466 KKIDGRTVMCELAEPKGSKDDDKPEKRRDSFPNPNPNTSSLAGRLSPLRSSYA--RENGL 639
K+IDGR +C+LA + + E + N A RL L + Y E L
Sbjct: 128 KRIDGRMTVCQLASTGALQVNPNQEVSQRKIYVGNVPLDLSADRLLALFAGYGEIEEGPL 187
Query: 640 GGLEFLGPGR 669
G +F G R
Sbjct: 188 GFDKFTGRSR 197
Score = 66.2 bits (160), Expect = 1e-08
Identities = 33/80 (41%), Positives = 50/80 (62%)
Frame = +1
Query: 265 DASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGAL 444
+ S+RKI+VG++ D + D L F +GE+E+ + DK TG+SRGF + +K V+ A
Sbjct: 152 EVSQRKIYVGNVPLDLSADRLLALFAGYGEIEEGPLGFDKFTGRSRGFALIIYKTVEAAK 211
Query: 445 NALRESSKKIDGRTVMCELA 504
AL E K +DG + C+LA
Sbjct: 212 RALLEPIKTLDGIQMYCKLA 231
>ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207569 [Cucumis sativus]
gi|449483196|ref|XP_004156519.1| PREDICTED:
uncharacterized protein LOC101231665 [Cucumis sativus]
Length = 434
Score = 126 bits (316), Expect = 1e-26
Identities = 68/141 (48%), Positives = 95/141 (67%), Gaps = 1/141 (0%)
Frame = +1
Query: 85 KRKRDQKQKEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKIID 261
KR+ D+ + +E + + IT EDA K++ + DQ ++L+ AV R VL VR I D
Sbjct: 6 KRRMDENGVDSSE-SSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVRSIAD 64
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
D S+RK+F+ LS DT+ +GL+ F +GE+E+ V DK+TGKS+G+GFVTFKHVDGA
Sbjct: 65 RDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKHVDGA 124
Query: 442 LNALRESSKKIDGRTVMCELA 504
L AL+E SK IDGR + +LA
Sbjct: 125 LLALKEPSKTIDGRVTVTQLA 145
Score = 63.9 bits (154), Expect = 7e-08
Identities = 47/135 (34%), Positives = 65/135 (48%)
Frame = +1
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
AD S RKI+V ++ D D L F +GE+E+ + DK TGK RG+ +K +GA
Sbjct: 157 ADLSLRKIYVANVPMDMPADKLLAHFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGA 216
Query: 442 LNALRESSKKIDGRTVMCELAEPKGSKDDDKPEKRRDSFPNPNPNTSSLAGRLSPLRSSY 621
AL + K IDGR + C+ A G K KP D ++ G P+
Sbjct: 217 QAALVDPIKTIDGRQLSCKFAN-DGKK--GKPGGGPDGNQTQGAGQGNVHGDGMPMAPPS 273
Query: 622 ARENGLGGLEFLGPG 666
A G GG ++ GPG
Sbjct: 274 AMP-GSGG-QYGGPG 286
>gb|EXC18503.1| Heterogeneous nuclear ribonucleoprotein A0 [Morus notabilis]
Length = 428
Score = 125 bits (315), Expect = 1e-26
Identities = 66/134 (49%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
Frame = +1
Query: 139 SITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKIIDADASRRKIFVGHLSFDTT 315
S++ +DA KL+ + DQ ++L+ AV R VL VR I D D S+RK+F+ L +DTT
Sbjct: 32 SLSPQDARKLIEHFTPDQLLDILQDAVARHVDVLDAVRSIADRDISQRKLFIRGLGWDTT 91
Query: 316 PDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGALNALRESSKKIDGRTVMC 495
DGL+ F +GE+E+ V DK+TGKS+G+GFVTF+HVDGAL AL+E SKKIDGR +
Sbjct: 92 TDGLRALFSAYGELEEAVVILDKNTGKSKGYGFVTFRHVDGALLALKEPSKKIDGRMTVT 151
Query: 496 ELAEPKGSKDDDKP 537
+LA S + P
Sbjct: 152 QLAAAGNSASNSAP 165
Score = 64.7 bits (156), Expect = 4e-08
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = +1
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
AD S RKI+V ++ +D D L F +G +E+ + DK TGK RG+ F +K +GA
Sbjct: 175 ADVSLRKIYVANVPYDMASDKLLAHFSVYGAIEEGPLGFDKQTGKCRGYAFFVYKSPEGA 234
Query: 442 LNALRESSKKIDGRTVMCELAEP--KGSKDDDKPEKRRDSFPNP-NPNTSSLAGRLS 603
AL K I+GR + C+LA KG + + + + P N ++SL+G+ S
Sbjct: 235 QAALVHPVKTIEGRQLNCKLAVDGRKGKQGVSQDAVQVPAAGGPGNAPSASLSGQFS 291
>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
gi|147789426|emb|CAN66609.1| hypothetical protein
VITISV_017556 [Vitis vinifera]
Length = 449
Score = 125 bits (315), Expect = 1e-26
Identities = 65/141 (46%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
Frame = +1
Query: 85 KRKRDQKQKEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKIID 261
KRK D+ + +T + EDA K++ DQ E+L+ A +R VL +R I D
Sbjct: 6 KRKMDENGLVSTDGDSLTKLAPEDARKIIEPFGHDQLLEILQNAAVRHLDVLDAIRSIAD 65
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
D ++RK+F+ L +DTT +GL++ F +GE+E+ V DK T KS+G+GFVTFKHVDGA
Sbjct: 66 RDLTQRKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVTFKHVDGA 125
Query: 442 LNALRESSKKIDGRTVMCELA 504
L AL+E SKKIDGR + +LA
Sbjct: 126 LLALKEPSKKIDGRMTVTQLA 146
Score = 67.0 bits (162), Expect = 8e-09
Identities = 34/80 (42%), Positives = 48/80 (60%)
Frame = +1
Query: 265 DASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGAL 444
D S RKI+V ++ D D L F +GE+E+ + DK TGKSRGF +K + A
Sbjct: 161 DVSMRKIYVANVPVDMPADRLLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQ 220
Query: 445 NALRESSKKIDGRTVMCELA 504
AL + +K IDGR ++C+LA
Sbjct: 221 AALVDPTKMIDGRQLVCKLA 240
>ref|XP_006582133.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform X1 [Glycine max]
gi|571461885|ref|XP_006582134.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform X2 [Glycine max]
Length = 444
Score = 125 bits (313), Expect = 3e-26
Identities = 66/152 (43%), Positives = 95/152 (62%), Gaps = 1/152 (0%)
Frame = +1
Query: 85 KRKRDQKQKEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKIID 261
KRK D+ + ++ ++ + KL+ +SDQ ++L+ AV R VL VR + D
Sbjct: 6 KRKLDENGFNNNDSSDPLKLSPSEVRKLIERFTSDQLLDILQDAVARHLDVLAAVRAVAD 65
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
D S+RK+F+ L +DTT DGL+ F G++E+ V DK+TGKS+G+GFVTF+HVDGA
Sbjct: 66 PDVSQRKLFIRGLGWDTTTDGLRSLFSTFGDLEEAVVILDKATGKSKGYGFVTFRHVDGA 125
Query: 442 LNALRESSKKIDGRTVMCELAEPKGSKDDDKP 537
L ALRE SK+IDGR + +LA S + P
Sbjct: 126 LLALREPSKRIDGRVTVTQLAAAGNSASNVNP 157
Score = 63.2 bits (152), Expect = 1e-07
Identities = 37/119 (31%), Positives = 60/119 (50%)
Frame = +1
Query: 166 LVSLLSSDQRTEVLKAVIRKPKVLKEVRKIIDADASRRKIFVGHLSFDTTPDGLKKAFEE 345
L++L +R + V + + AD + RKI+V ++ D D L F
Sbjct: 126 LLALREPSKRIDGRVTVTQLAAAGNSASNVNPADVALRKIYVANVPPDLPADKLLAHFSV 185
Query: 346 HGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGALNALRESSKKIDGRTVMCELAEPKGSK 522
+GE+E+ + DK TGKS+GF +K +GA AL + K ++GR + C+LA G +
Sbjct: 186 YGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAQAALIDPVKTVEGRQLSCKLAITDGKQ 244
>gb|EMJ12722.1| hypothetical protein PRUPE_ppa008108mg [Prunus persica]
Length = 345
Score = 125 bits (313), Expect = 3e-26
Identities = 71/173 (41%), Positives = 102/173 (58%), Gaps = 2/173 (1%)
Frame = +1
Query: 85 KRKRDQKQKEGAEP-AEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKII 258
KRK + P ++ +S+T EDA KL+ L+ DQ ++L+ AV+R P VL VR +
Sbjct: 6 KRKTELNGTVSLSPTSQSSSLTSEDARKLLQPLTQDQLIDILQNAVVRHPDVLDSVRSVT 65
Query: 259 DADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDG 438
D D++ RK+F+ L DTT D L+ F G++++ V DK+TGKS+G+GFVTFKH D
Sbjct: 66 DKDSTLRKLFIRGLGADTTSDSLRSLFSAFGDLDEAIVIPDKATGKSKGYGFVTFKHADS 125
Query: 439 ALNALRESSKKIDGRTVMCELAEPKGSKDDDKPEKRRDSFPNPNPNTSSLAGR 597
AL AL+E SKKIDGR + + A + SF N N N + ++ R
Sbjct: 126 ALLALKEPSKKIDGRVTVTQFAAAGLTA----------SFSNSNSNAADVSAR 168
>ref|NP_188119.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|42572443|ref|NP_974317.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|75335116|sp|Q9LKA4.1|UBA2C_ARATH RecName:
Full=UBP1-associated protein 2C
gi|8777484|dbj|BAA97064.1| unnamed protein product
[Arabidopsis thaliana] gi|17380744|gb|AAL36202.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|20259621|gb|AAM14167.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|222422941|dbj|BAH19456.1|
AT3G15010 [Arabidopsis thaliana]
gi|332642081|gb|AEE75602.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|332642082|gb|AEE75603.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 404
Score = 124 bits (312), Expect = 3e-26
Identities = 66/147 (44%), Positives = 96/147 (65%), Gaps = 5/147 (3%)
Frame = +1
Query: 79 MVKRKRDQK----QKEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKE 243
M KRK D+ G T ++ +DA K++ ++DQ ++L+ A++R P VL+
Sbjct: 4 MKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDVLES 63
Query: 244 VRKIIDADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTF 423
VR D+D S+RK+F+ L+ DTT +GL+ F +G++E+ V DK TGKS+G+GFVTF
Sbjct: 64 VRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTF 123
Query: 424 KHVDGALNALRESSKKIDGRTVMCELA 504
HVDGAL AL+E SKKIDGR + +LA
Sbjct: 124 MHVDGALLALKEPSKKIDGRVTVTQLA 150
Score = 67.4 bits (163), Expect = 6e-09
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
AD S RKI+V ++ FD D L F +G+VE+ + DK TGKSRGF +K +GA
Sbjct: 162 ADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGA 221
Query: 442 LNALRESSKKIDGRTVMCELA 504
AL + K IDG+ + C+LA
Sbjct: 222 QAALADPVKVIDGKHLNCKLA 242
>ref|XP_006392809.1| hypothetical protein EUTSA_v10011518mg [Eutrema salsugineum]
gi|557089387|gb|ESQ30095.1| hypothetical protein
EUTSA_v10011518mg [Eutrema salsugineum]
Length = 421
Score = 124 bits (311), Expect = 4e-26
Identities = 67/145 (46%), Positives = 96/145 (66%), Gaps = 5/145 (3%)
Frame = +1
Query: 85 KRKRDQKQ----KEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVR 249
KRK D+ +G A T + +DA K++ S+DQ ++L+ AV+R P VL+ VR
Sbjct: 6 KRKLDENGIGFLNDGHVGAVPTRLMPQDARKIIERFSTDQLLDILQEAVVRHPDVLEFVR 65
Query: 250 KIIDADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKH 429
D+D S+RK+F+ L+ +TT +GL+ F +G++E+ V DK T KS+G+GFVTFKH
Sbjct: 66 STADSDISQRKLFIRGLAAETTTEGLRSLFSNYGDLEEAIVILDKVTAKSKGYGFVTFKH 125
Query: 430 VDGALNALRESSKKIDGRTVMCELA 504
VDGAL AL+E SKKIDGR + +LA
Sbjct: 126 VDGALLALKEPSKKIDGRVTVTQLA 150
Score = 67.4 bits (163), Expect = 6e-09
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = +1
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
+D S RKI+V ++ FD D L F +G++E+ + DK TGKSRGF +K +GA
Sbjct: 162 SDISMRKIYVANVPFDMPADRLLNQFLAYGDIEEGPLGFDKVTGKSRGFALFVYKTAEGA 221
Query: 442 LNALRESSKKIDGRTVMCELA 504
AL + K IDG+ + C+LA
Sbjct: 222 QAALADPVKVIDGKNLQCKLA 242
>ref|XP_006852453.1| hypothetical protein AMTR_s00021p00110500 [Amborella trichopoda]
gi|548856064|gb|ERN13920.1| hypothetical protein
AMTR_s00021p00110500 [Amborella trichopoda]
Length = 409
Score = 123 bits (308), Expect = 1e-25
Identities = 65/137 (47%), Positives = 93/137 (67%), Gaps = 1/137 (0%)
Frame = +1
Query: 97 DQKQKEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKIIDADAS 273
D K+++ E T I+ EDA K++ + +Q ++L+ A R P VL VR I D D +
Sbjct: 2 DSKKRKTEENGSGT-ISVEDARKIIEPFTQEQLLDILQEATARHPDVLDLVRAIADRDPT 60
Query: 274 RRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGALNAL 453
RK+F+ L +DTT + L+ F ++GE+E+ V DK+TGKS+G+GFVTFKH+DGALNAL
Sbjct: 61 DRKLFIRGLGWDTTTESLRTLFSQYGEIEEGVVILDKATGKSKGYGFVTFKHIDGALNAL 120
Query: 454 RESSKKIDGRTVMCELA 504
+E SKKIDGR + +LA
Sbjct: 121 KEPSKKIDGRMTVTQLA 137
Score = 80.9 bits (198), Expect = 5e-13
Identities = 52/136 (38%), Positives = 69/136 (50%)
Frame = +1
Query: 265 DASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGAL 444
D S RKIFVG++ FD D L F ++GEVE+ + DK TGKSRGF +K V+ A
Sbjct: 149 DVSARKIFVGNVPFDMPADRLLHHFLQYGEVEEGPLGFDKQTGKSRGFALFVYKTVEAAK 208
Query: 445 NALRESSKKIDGRTVMCELAEPKGSKDDDKPEKRRDSFPNPNPNTSSLAGRLSPLRSSYA 624
AL E +K +DG ++C+LA D K + NP P + L G P +
Sbjct: 209 AALEEPNKSVDGHQLVCKLAV------DGKKGRPLAGQENPVPEPTGLGGLSGP--PTNP 260
Query: 625 RENGLGGLEFLGPGRA 672
GLG + PG A
Sbjct: 261 PPYGLGHSGYTQPGMA 276
>ref|XP_002882908.1| hypothetical protein ARALYDRAFT_478927 [Arabidopsis lyrata subsp.
lyrata] gi|297328748|gb|EFH59167.1| hypothetical protein
ARALYDRAFT_478927 [Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 123 bits (308), Expect = 1e-25
Identities = 67/147 (45%), Positives = 94/147 (63%), Gaps = 5/147 (3%)
Frame = +1
Query: 79 MVKRKRDQKQ----KEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKE 243
M KRK D+ G T +T +DA K++ ++DQ ++L+ A++R P VL
Sbjct: 4 MKKRKLDENGGGLITNGGGIIGPTRLTPQDARKIIERFTTDQLLDLLQEAIVRHPDVLDS 63
Query: 244 VRKIIDADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTF 423
VR D+D S+RK+F+ L+ DTT +GL F +G++E+ V DK TGKS+G+GFVTF
Sbjct: 64 VRSTADSDISQRKLFIRGLAADTTTEGLLSLFSNYGDLEEAIVILDKVTGKSKGYGFVTF 123
Query: 424 KHVDGALNALRESSKKIDGRTVMCELA 504
HVDGAL AL+E SKKIDGR + +LA
Sbjct: 124 MHVDGALLALKEPSKKIDGRVTVTQLA 150
Score = 70.1 bits (170), Expect = 1e-09
Identities = 40/92 (43%), Positives = 53/92 (57%)
Frame = +1
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
AD S RKI+V ++ FD D L F +G+VE+ + DK TGKSRGF +K +GA
Sbjct: 162 ADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGA 221
Query: 442 LNALRESSKKIDGRTVMCELAEPKGSKDDDKP 537
AL + K IDG+ + C+LA G K KP
Sbjct: 222 QTALADPVKVIDGKHLNCKLA-VDGKKGGGKP 252
>gb|ESW05187.1| hypothetical protein PHAVU_011G159400g [Phaseolus vulgaris]
Length = 438
Score = 122 bits (307), Expect = 1e-25
Identities = 65/141 (46%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
Frame = +1
Query: 85 KRKRDQKQKEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKIID 261
KRK D+ ++P +++ +A KL+ + +Q ++L+ AV R VL VR + D
Sbjct: 6 KRKLDENGFGDSDPLKLSP---SEARKLIERFTPEQLLDILQDAVARHADVLASVRAVAD 62
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
D S+RK+FV L +DTT DGL+ F +GE+E+ V DK+TGKS+G+GFVTF+HVDGA
Sbjct: 63 PDVSQRKLFVRGLGWDTTTDGLRSLFSAYGELEEAVVIVDKATGKSKGYGFVTFRHVDGA 122
Query: 442 LNALRESSKKIDGRTVMCELA 504
+ ALRE SK+IDGR + +LA
Sbjct: 123 ILALREPSKRIDGRVTVTQLA 143
Score = 62.8 bits (151), Expect = 2e-07
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = +1
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
AD + RKI+V ++ D D L F +GE+E+ + DK TGKS+GF +K +GA
Sbjct: 155 ADVALRKIYVANVPPDLPADKLLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKTPEGA 214
Query: 442 LNALRESSKKIDGRTVMCELAEPKGSK 522
AL + K ++GR + C+LA G +
Sbjct: 215 QAALLDPVKTVEGRQLSCKLAITDGKQ 241
>gb|AGV54510.1| polyadenylate-binding protein, cytoplasmic and nuclear-like protein
[Phaseolus vulgaris]
Length = 437
Score = 122 bits (307), Expect = 1e-25
Identities = 65/141 (46%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
Frame = +1
Query: 85 KRKRDQKQKEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKIID 261
KRK D+ ++P +++ +A KL+ + +Q ++L+ AV R VL VR + D
Sbjct: 6 KRKLDENGFGDSDPLKLSP---SEARKLIERFTPEQLLDILQDAVARHADVLASVRAVAD 62
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
D S+RK+FV L +DTT DGL+ F +GE+E+ V DK+TGKS+G+GFVTF+HVDGA
Sbjct: 63 PDVSQRKLFVRGLGWDTTTDGLRSLFSAYGELEEAVVIVDKATGKSKGYGFVTFRHVDGA 122
Query: 442 LNALRESSKKIDGRTVMCELA 504
+ ALRE SK+IDGR + +LA
Sbjct: 123 ILALREPSKRIDGRVTVTQLA 143
>gb|AGV54416.1| polyadenylate-binding protein [Phaseolus vulgaris]
Length = 438
Score = 122 bits (307), Expect = 1e-25
Identities = 65/141 (46%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
Frame = +1
Query: 85 KRKRDQKQKEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVRKIID 261
KRK D+ ++P +++ +A KL+ + +Q ++L+ AV R VL VR + D
Sbjct: 6 KRKLDENGFGDSDPLKLSP---SEARKLIERFTPEQLLDILQDAVARHADVLASVRAVAD 62
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
D S+RK+FV L +DTT DGL+ F +GE+E+ V DK+TGKS+G+GFVTF+HVDGA
Sbjct: 63 PDVSQRKLFVRGLGWDTTTDGLRSLFSAYGELEEAVVIVDKATGKSKGYGFVTFRHVDGA 122
Query: 442 LNALRESSKKIDGRTVMCELA 504
+ ALRE SK+IDGR + +LA
Sbjct: 123 ILALREPSKRIDGRVTVTQLA 143
Score = 63.9 bits (154), Expect = 7e-08
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +1
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
AD + RKI+V ++ D D L F +GE+E+ + DK TGKS+GF +K+ +GA
Sbjct: 155 ADVALRKIYVANVPPDLPADKLLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKNPEGA 214
Query: 442 LNALRESSKKIDGRTVMCELAEPKGSK 522
AL + K ++GR + C+LA G +
Sbjct: 215 QAALLDPVKTVEGRQLSCKLAITDGKQ 241
>ref|XP_004294103.1| PREDICTED: polyadenylate-binding protein 2-like [Fragaria vesca
subsp. vesca]
Length = 434
Score = 122 bits (307), Expect = 1e-25
Identities = 66/142 (46%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Frame = +1
Query: 85 KRKRDQKQKE-GAEPAEITSITDEDASKLVSLLSSDQRTEVL-KAVIRKPKVLKEVRKII 258
KRK D+ +P+ + + EDA K++ S DQ +VL A+ R VL VR I
Sbjct: 6 KRKLDENGVVLDTDPSSVPKLDREDARKIIERFSPDQLIDVLLDAISRHSDVLDAVRSIA 65
Query: 259 DADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDG 438
D D ++RK+F+ L +DTT +GL+ F +GE+E+ V DK+TGKS+G+GFVTFKHVD
Sbjct: 66 DPDTAQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKNTGKSKGYGFVTFKHVDA 125
Query: 439 ALNALRESSKKIDGRTVMCELA 504
A AL+E SKKIDGR + +LA
Sbjct: 126 AYLALKEPSKKIDGRMTVTQLA 147
Score = 68.2 bits (165), Expect = 4e-09
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 9/179 (5%)
Frame = +1
Query: 265 DASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGAL 444
D S RKI+V ++ ++ D L F ++GEVE+ + DK TGK +G+ +K +GA
Sbjct: 168 DVSLRKIYVANVPYEMAADKLLAHFAQYGEVEEGPLGFDKQTGKCKGYALFVYKTPEGAQ 227
Query: 445 NALRESSKKIDGRTVMCELA----EPKGSKDDDKPEKRRDSFPNPNPNTSSLAGRLSPLR 612
AL + K I+GR + C+ A +PK D + + PN + + ++P
Sbjct: 228 KALVDPIKNIEGRQLNCKFASDGKKPKMGGGADGGSQGQGPVGGPNAHGDGMG--MAPPS 285
Query: 613 SSYARENGLGGLEFLG-----PGRALREYSNPRDFGGLRDLGTRDSGLRDFGARDSGLG 774
S + G GG + G P P GL LG + G +G SGLG
Sbjct: 286 SMPGQYGGPGGFGYGGFSGGQPPLGHHHLGGP----GLSSLGNQGPGSGGYG---SGLG 337
>ref|XP_006307615.1| hypothetical protein CARUB_v10009243mg [Capsella rubella]
gi|565499954|ref|XP_006307616.1| hypothetical protein
CARUB_v10009243mg [Capsella rubella]
gi|482576326|gb|EOA40513.1| hypothetical protein
CARUB_v10009243mg [Capsella rubella]
gi|482576327|gb|EOA40514.1| hypothetical protein
CARUB_v10009243mg [Capsella rubella]
Length = 422
Score = 122 bits (306), Expect = 2e-25
Identities = 65/145 (44%), Positives = 95/145 (65%), Gaps = 5/145 (3%)
Frame = +1
Query: 85 KRKRDQKQ----KEGAEPAEITSITDEDASKLVSLLSSDQRTEVLK-AVIRKPKVLKEVR 249
KRK D +G A + + +DA K++ S+DQ ++L+ A++R P VL+ VR
Sbjct: 6 KRKLDDNGIGMLNDGVIGAVSSRLMPQDARKIIERFSTDQLLDILQEAIVRHPDVLEIVR 65
Query: 250 KIIDADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKH 429
D+D S+RK+F+ L+ +TT +GL+ F +G++E+ V DK T KS+G+GFVTFKH
Sbjct: 66 STADSDISQRKLFIRGLAAETTTEGLRSLFSNYGDLEEAIVILDKVTAKSKGYGFVTFKH 125
Query: 430 VDGALNALRESSKKIDGRTVMCELA 504
VDGAL AL+E SKKIDGR + +LA
Sbjct: 126 VDGALLALKEPSKKIDGRVTVTQLA 150
Score = 68.6 bits (166), Expect = 3e-09
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = +1
Query: 262 ADASRRKIFVGHLSFDTTPDGLKKAFEEHGEVEDYFVAKDKSTGKSRGFGFVTFKHVDGA 441
+D S RKI+V ++ FD D L F +G++E+ + DK TGKSRGF +K +GA
Sbjct: 163 SDISMRKIYVANVPFDMPADRLLNQFLAYGDIEEGPLGFDKITGKSRGFALFVYKTAEGA 222
Query: 442 LNALRESSKKIDGRTVMCELA 504
AL E K +DG+ + C+LA
Sbjct: 223 QAALAEPMKVVDGKNLQCKLA 243