BLASTX nr result

ID: Ephedra26_contig00008833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00008833
         (1112 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE75986.1| unknown [Picea sitchensis]                             117   1e-23

>gb|ADE75986.1| unknown [Picea sitchensis]
          Length = 412

 Score =  117 bits (292), Expect = 1e-23
 Identities = 93/274 (33%), Positives = 146/274 (53%), Gaps = 15/274 (5%)
 Frame = -1

Query: 779 DVKRTKQDSNCLDRLQQQN-----PSMQSKDAYRVDRSMLTDFKKEAVIYGDRSLQKNPQ 615
           ++K  KQ+  C+D+ Q QN      +  ++D+ R D+ +      + V + D + Q+  Q
Sbjct: 12  EMKARKQELTCMDKFQLQNMVSKLDTTLTRDSQRKDKLVPQGRNSKTVYFSDVAGQRCSQ 71

Query: 614 QLAVNIDQQAALREALHSESKQSIQLGQRNGAELKIKEEFIDPVKCQVPSAVEIHESERN 435
           Q   + DQQ  +RE    ESK S    QR+  E K+KE+ ID  + Q+  ++E  E ER 
Sbjct: 72  QSTGDDDQQVTVREVSPHESKLSPHFYQRSTWEFKVKEQ-IDLERGQI--SIEETEVERI 128

Query: 434 NEDQLSTMPSNEKLDHQHLLSPKTS-QHGKMPFQWHGIGS---KDQKRDEILSRS--LQN 273
            + Q S    NE+ D QH+LS   S QHGK  FQWH +G    KDQK+D++L ++  +++
Sbjct: 129 KDHQHSMELDNEQPDQQHMLSQCFSQQHGKPSFQWHSVGQLGRKDQKKDDLLQKTKFVKS 188

Query: 272 PRD-QQGDTRNSLQSPPLVMPGEVSQSMTXXXXXXXXXXXSFYANSNANG---QERERSL 105
            R+ Q+ + R +LQS PL   GE+SQ +T           S Y N   +    Q+RE+  
Sbjct: 189 SRELQKPEVRGALQSIPLSNSGELSQPLTYTAMPTASLGPS-YNNITVSAVVRQQREKQP 247

Query: 104 GPASGPSAVSMLNANQNDLQHQQLQGPMPVIRQR 3
           G  +  ++V+ +N++Q D Q Q +Q  M   R R
Sbjct: 248 GLGTVLTSVTGVNSSQLDSQKQWVQPSMSFGRHR 281


Top