BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00008721
         (520 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004491574.1| PREDICTED: putative exosome complex componen...   106   4e-21
ref|XP_002282635.1| PREDICTED: putative exosome complex componen...   104   1e-20
gb|ESW26341.1| hypothetical protein PHAVU_003G111100g [Phaseolus...   103   2e-20
ref|XP_006827742.1| hypothetical protein AMTR_s00009p00262150 [A...   103   2e-20
ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago ...   103   3e-20
ref|XP_002318044.1| exonuclease-related family protein [Populus ...   103   3e-20
ref|XP_006572879.1| PREDICTED: uncharacterized protein LOC100809...   102   4e-20
ref|XP_006476772.1| PREDICTED: putative exosome complex componen...   102   4e-20
ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citr...   102   4e-20
ref|XP_004969374.1| PREDICTED: putative exosome complex componen...   102   4e-20
ref|XP_002456088.1| hypothetical protein SORBIDRAFT_03g030230 [S...   102   4e-20
ref|XP_003518749.1| PREDICTED: putative exosome complex componen...   102   5e-20
tpg|DAA58257.1| TPA: exosome complex exonuclease RRP40 [Zea mays]     101   1e-19
tpg|DAA58255.1| TPA: hypothetical protein ZEAMMB73_922165 [Zea m...   101   1e-19
gb|ACN36007.1| unknown [Zea mays]                                     101   1e-19
gb|ACG35320.1| exosome complex exonuclease RRP40 [Zea mays]           101   1e-19
ref|NP_001148820.1| exosome complex exonuclease RRP40 [Zea mays]...   101   1e-19
gb|ESW29698.1| hypothetical protein PHAVU_002G091200g [Phaseolus...   100   2e-19
ref|XP_002511406.1| Exosome complex exonuclease RRP40, putative ...   100   3e-19
ref|XP_006644470.1| PREDICTED: putative exosome complex componen...    97   2e-18

>ref|XP_004491574.1| PREDICTED: putative exosome complex component rrp40-like [Cicer
           arietinum]
          Length = 104

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/65 (78%), Positives = 59/65 (90%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVL+ LGK LSFEIAVG+NGRVWVNA S +TTI+V+NAIMN+E LSGVQQKIM E+L
Sbjct: 40  PTCPVLDTLGKKLSFEIAVGLNGRVWVNASSPSTTIIVANAIMNSETLSGVQQKIMAEKL 99

Query: 186 LERVQ 200
           L+RVQ
Sbjct: 100 LQRVQ 104


>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
           vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
           product [Vitis vinifera]
          Length = 237

 Score =  104 bits (259), Expect = 1e-20
 Identities = 51/65 (78%), Positives = 59/65 (90%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVLEALGK LSFEIAVG+NGRVWVNA S +T ILV+NAIMN+E LS VQQKIMV++L
Sbjct: 173 PTCPVLEALGKKLSFEIAVGLNGRVWVNASSPSTVILVANAIMNSESLSVVQQKIMVDKL 232

Query: 186 LERVQ 200
           L+R+Q
Sbjct: 233 LQRIQ 237


>gb|ESW26341.1| hypothetical protein PHAVU_003G111100g [Phaseolus vulgaris]
          Length = 240

 Score =  103 bits (258), Expect = 2e-20
 Identities = 49/65 (75%), Positives = 59/65 (90%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVL+ALGK +SFEIAVG+NGRVWVNA ST TTI+V+NAIMN+E LS  QQ+IMVE+L
Sbjct: 176 PTCPVLDALGKKISFEIAVGLNGRVWVNAASTQTTIIVANAIMNSETLSDAQQRIMVEKL 235

Query: 186 LERVQ 200
           L+R+Q
Sbjct: 236 LKRIQ 240


>ref|XP_006827742.1| hypothetical protein AMTR_s00009p00262150 [Amborella trichopoda]
           gi|548832362|gb|ERM95158.1| hypothetical protein
           AMTR_s00009p00262150 [Amborella trichopoda]
          Length = 240

 Score =  103 bits (257), Expect = 2e-20
 Identities = 50/66 (75%), Positives = 60/66 (90%)
 Frame = +3

Query: 3   KPTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVER 182
           +PTCPVL+ALGK LSFEIAVG+NGRVWVNA S +T ILV+NAIM+AE LSG QQ+I+VE+
Sbjct: 175 RPTCPVLDALGKKLSFEIAVGLNGRVWVNASSPSTVILVANAIMSAEFLSGAQQRILVEK 234

Query: 183 LLERVQ 200
           LL+RVQ
Sbjct: 235 LLQRVQ 240


>ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago truncatula]
           gi|217074508|gb|ACJ85614.1| unknown [Medicago
           truncatula] gi|355515294|gb|AES96917.1| Exosome complex
           exonuclease RRP40 [Medicago truncatula]
           gi|388510130|gb|AFK43131.1| unknown [Medicago
           truncatula]
          Length = 240

 Score =  103 bits (256), Expect = 3e-20
 Identities = 49/65 (75%), Positives = 59/65 (90%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVL+ LGK LSFEIAVG+NGRVWVNA S +TTI+V+NA++N+E LSGVQQKIM E+L
Sbjct: 176 PTCPVLDTLGKKLSFEIAVGLNGRVWVNASSPSTTIIVANALINSEVLSGVQQKIMAEKL 235

Query: 186 LERVQ 200
           L+RVQ
Sbjct: 236 LQRVQ 240


>ref|XP_002318044.1| exonuclease-related family protein [Populus trichocarpa]
           gi|118482713|gb|ABK93275.1| unknown [Populus
           trichocarpa] gi|222858717|gb|EEE96264.1|
           exonuclease-related family protein [Populus trichocarpa]
          Length = 242

 Score =  103 bits (256), Expect = 3e-20
 Identities = 49/66 (74%), Positives = 59/66 (89%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVLEALGK LSFEIAVG+NGRVWVNA S +  I+V+NAIMN+E LSGVQQKIM E+L
Sbjct: 176 PTCPVLEALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGVQQKIMAEKL 235

Query: 186 LERVQH 203
           L+++Q+
Sbjct: 236 LQKIQN 241


>ref|XP_006572879.1| PREDICTED: uncharacterized protein LOC100809941 isoform X1 [Glycine
           max] gi|571433381|ref|XP_006572880.1| PREDICTED:
           uncharacterized protein LOC100809941 isoform X2 [Glycine
           max] gi|571433383|ref|XP_006572881.1| PREDICTED:
           uncharacterized protein LOC100809941 isoform X3 [Glycine
           max] gi|571433385|ref|XP_006572882.1| PREDICTED:
           uncharacterized protein LOC100809941 isoform X4 [Glycine
           max]
          Length = 240

 Score =  102 bits (255), Expect = 4e-20
 Identities = 49/65 (75%), Positives = 59/65 (90%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVL+ALGK LSFEIAVG+NGRVWV+A S  TTI+V+NAIMN+E LSG QQ+IMVE+L
Sbjct: 176 PTCPVLDALGKKLSFEIAVGLNGRVWVDAASPHTTIVVANAIMNSETLSGAQQRIMVEKL 235

Query: 186 LERVQ 200
           L+R+Q
Sbjct: 236 LQRIQ 240


>ref|XP_006476772.1| PREDICTED: putative exosome complex component rrp40-like isoform X1
           [Citrus sinensis] gi|568845839|ref|XP_006476773.1|
           PREDICTED: putative exosome complex component rrp40-like
           isoform X2 [Citrus sinensis]
          Length = 238

 Score =  102 bits (255), Expect = 4e-20
 Identities = 49/65 (75%), Positives = 58/65 (89%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVLE LGK LSFEIAVG+NGRVWVNA S +T +LVSNAIMN+E LS VQQKIMV++L
Sbjct: 174 PTCPVLEELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQKIMVDKL 233

Query: 186 LERVQ 200
           L+R++
Sbjct: 234 LQRIK 238


>ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citrus clementina]
           gi|567894648|ref|XP_006439812.1| hypothetical protein
           CICLE_v10021986mg [Citrus clementina]
           gi|557542073|gb|ESR53051.1| hypothetical protein
           CICLE_v10021986mg [Citrus clementina]
           gi|557542074|gb|ESR53052.1| hypothetical protein
           CICLE_v10021986mg [Citrus clementina]
          Length = 238

 Score =  102 bits (255), Expect = 4e-20
 Identities = 49/65 (75%), Positives = 58/65 (89%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVLE LGK LSFEIAVG+NGRVWVNA S +T +LVSNAIMN+E LS VQQKIMV++L
Sbjct: 174 PTCPVLEELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQKIMVDKL 233

Query: 186 LERVQ 200
           L+R++
Sbjct: 234 LQRIK 238


>ref|XP_004969374.1| PREDICTED: putative exosome complex component rrp40-like [Setaria
           italica]
          Length = 239

 Score =  102 bits (255), Expect = 4e-20
 Identities = 50/64 (78%), Positives = 56/64 (87%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVLEALGK LSFEIAVG+NGRVWVNAP+  T ILVSNAIM +E LSG+QQ+ MVE L
Sbjct: 175 PTCPVLEALGKKLSFEIAVGLNGRVWVNAPAPNTVILVSNAIMRSESLSGIQQRAMVENL 234

Query: 186 LERV 197
           LER+
Sbjct: 235 LERL 238


>ref|XP_002456088.1| hypothetical protein SORBIDRAFT_03g030230 [Sorghum bicolor]
           gi|241928063|gb|EES01208.1| hypothetical protein
           SORBIDRAFT_03g030230 [Sorghum bicolor]
          Length = 239

 Score =  102 bits (255), Expect = 4e-20
 Identities = 49/64 (76%), Positives = 57/64 (89%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVLEALGK LSFEIAVG+NGRVWVNAP+ +T ILVSNAIM +E LSG++Q+ MVE L
Sbjct: 175 PTCPVLEALGKKLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESLSGIKQRAMVENL 234

Query: 186 LERV 197
           LER+
Sbjct: 235 LERL 238


>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like isoform X1
           [Glycine max] gi|571439680|ref|XP_006574927.1|
           PREDICTED: putative exosome complex component rrp40-like
           isoform X2 [Glycine max]
          Length = 240

 Score =  102 bits (254), Expect = 5e-20
 Identities = 49/64 (76%), Positives = 58/64 (90%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVL+ALGK LSFEIAVG+NGRVWV+A S  TTI+V+NAIMN+E LSG QQ+IMVE+L
Sbjct: 176 PTCPVLDALGKKLSFEIAVGLNGRVWVSAASPQTTIVVANAIMNSETLSGAQQRIMVEKL 235

Query: 186 LERV 197
           LER+
Sbjct: 236 LERI 239


>tpg|DAA58257.1| TPA: exosome complex exonuclease RRP40 [Zea mays]
          Length = 239

 Score =  101 bits (251), Expect = 1e-19
 Identities = 48/64 (75%), Positives = 56/64 (87%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVLE LGK LSFEIAVG+NGRVWVNAP+ +T ILVSNAIM +E LSG++Q+ MVE L
Sbjct: 175 PTCPVLEVLGKKLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESLSGIKQRAMVENL 234

Query: 186 LERV 197
           LER+
Sbjct: 235 LERL 238


>tpg|DAA58255.1| TPA: hypothetical protein ZEAMMB73_922165 [Zea mays]
          Length = 80

 Score =  101 bits (251), Expect = 1e-19
 Identities = 48/64 (75%), Positives = 56/64 (87%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVLE LGK LSFEIAVG+NGRVWVNAP+ +T ILVSNAIM +E LSG++Q+ MVE L
Sbjct: 16  PTCPVLEVLGKKLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESLSGIKQRAMVENL 75

Query: 186 LERV 197
           LER+
Sbjct: 76  LERL 79


>gb|ACN36007.1| unknown [Zea mays]
          Length = 104

 Score =  101 bits (251), Expect = 1e-19
 Identities = 48/64 (75%), Positives = 56/64 (87%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVLE LGK LSFEIAVG+NGRVWVNAP+ +T ILVSNAIM +E LSG++Q+ MVE L
Sbjct: 40  PTCPVLEVLGKKLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESLSGIKQRAMVENL 99

Query: 186 LERV 197
           LER+
Sbjct: 100 LERL 103


>gb|ACG35320.1| exosome complex exonuclease RRP40 [Zea mays]
          Length = 239

 Score =  101 bits (251), Expect = 1e-19
 Identities = 48/64 (75%), Positives = 56/64 (87%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVLE LGK LSFEIAVG+NGRVWVNAP+ +T ILVSNAIM +E LSG++Q+ MVE L
Sbjct: 175 PTCPVLEVLGKXLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESLSGIKQRAMVENL 234

Query: 186 LERV 197
           LER+
Sbjct: 235 LERL 238


>ref|NP_001148820.1| exosome complex exonuclease RRP40 [Zea mays]
           gi|195622378|gb|ACG33019.1| exosome complex exonuclease
           RRP40 [Zea mays] gi|238006308|gb|ACR34189.1| unknown
           [Zea mays] gi|414881121|tpg|DAA58252.1| TPA: exosome
           complex exonuclease RRP40 [Zea mays]
          Length = 239

 Score =  101 bits (251), Expect = 1e-19
 Identities = 48/64 (75%), Positives = 56/64 (87%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVLE LGK LSFEIAVG+NGRVWVNAP+ +T ILVSNAIM +E LSG++Q+ MVE L
Sbjct: 175 PTCPVLEVLGKKLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESLSGIKQRAMVENL 234

Query: 186 LERV 197
           LER+
Sbjct: 235 LERL 238


>gb|ESW29698.1| hypothetical protein PHAVU_002G091200g [Phaseolus vulgaris]
          Length = 240

 Score =  100 bits (249), Expect = 2e-19
 Identities = 48/65 (73%), Positives = 57/65 (87%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVL+ALGK +SFEIAVG+NGRVWVNA S  TTI V+NAIMN+E LS  QQ+IMVE+L
Sbjct: 176 PTCPVLDALGKKISFEIAVGLNGRVWVNAASPQTTITVANAIMNSETLSDAQQRIMVEKL 235

Query: 186 LERVQ 200
           L+R+Q
Sbjct: 236 LKRIQ 240


>ref|XP_002511406.1| Exosome complex exonuclease RRP40, putative [Ricinus communis]
           gi|223550521|gb|EEF52008.1| Exosome complex exonuclease
           RRP40, putative [Ricinus communis]
          Length = 234

 Score =  100 bits (248), Expect = 3e-19
 Identities = 48/65 (73%), Positives = 58/65 (89%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVLEALGK LSFEIAVG+NGRVWVNA S +T I+V+NAIMN+E LS VQQKIMV+ L
Sbjct: 148 PTCPVLEALGKKLSFEIAVGINGRVWVNATSPSTIIVVANAIMNSETLSAVQQKIMVDNL 207

Query: 186 LERVQ 200
           L++++
Sbjct: 208 LDKIR 212


>ref|XP_006644470.1| PREDICTED: putative exosome complex component rrp40-like [Oryza
           brachyantha]
          Length = 220

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 47/64 (73%), Positives = 55/64 (85%)
 Frame = +3

Query: 6   PTCPVLEALGKALSFEIAVGMNGRVWVNAPSTATTILVSNAIMNAERLSGVQQKIMVERL 185
           PTCPVLEALGK LSFEIAVG+NGRVWVNAPS +  I+VSNAI+ +E LSG+ Q+ MVE L
Sbjct: 156 PTCPVLEALGKKLSFEIAVGLNGRVWVNAPSPSNVIVVSNAIIKSESLSGIGQRSMVESL 215

Query: 186 LERV 197
           LER+
Sbjct: 216 LERL 219