BLASTX nr result
ID: Ephedra26_contig00008629
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra26_contig00008629 (887 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK24359.1| unknown [Picea sitchensis] 64 1e-07 gb|ACA04857.1| putative copine I [Picea abies] 62 3e-07 ref|XP_004304674.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2... 59 2e-06 gb|AAX20031.1| RING-finger protein [Capsicum annuum] 59 2e-06 >gb|ABK24359.1| unknown [Picea sitchensis] Length = 423 Score = 63.5 bits (153), Expect = 1e-07 Identities = 32/41 (78%), Positives = 33/41 (80%) Frame = +2 Query: 764 PSPPQPPAAKHKLQRRYSRIADNYNSLDEVTKDLAQSGLES 886 P PAAK KLQRRYSRIADNYNSLDEVT LAQ+GLES Sbjct: 38 PETYSQPAAKQKLQRRYSRIADNYNSLDEVTAALAQAGLES 78 >gb|ACA04857.1| putative copine I [Picea abies] Length = 220 Score = 62.0 bits (149), Expect = 3e-07 Identities = 41/93 (44%), Positives = 46/93 (49%), Gaps = 6/93 (6%) Frame = +2 Query: 626 KRYRMGGRQSKSTRRXXXXXXXXXXXXXXXXXXXXXXXXXXXQNWYPSPP------QPPA 787 KR MGG+ SK R ++YPS P Sbjct: 14 KRLAMGGKHSKGLR---------WKRPSYSSSSYGPSPAWNSSSYYPSSAVISETYTQPV 64 Query: 788 AKHKLQRRYSRIADNYNSLDEVTKDLAQSGLES 886 AK+KLQRRYSRIADNYNSLDEVT LAQ+GLES Sbjct: 65 AKNKLQRRYSRIADNYNSLDEVTAALAQAGLES 97 >ref|XP_004304674.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Fragaria vesca subsp. vesca] Length = 483 Score = 59.3 bits (142), Expect = 2e-06 Identities = 30/43 (69%), Positives = 34/43 (79%), Gaps = 1/43 (2%) Frame = +2 Query: 761 YPSPPQPP-AAKHKLQRRYSRIADNYNSLDEVTKDLAQSGLES 886 Y SPP P K KL RRYSRIADNYNSL+EVT+ LA++GLES Sbjct: 74 YSSPPPPDYGGKRKLDRRYSRIADNYNSLEEVTEALARAGLES 116 >gb|AAX20031.1| RING-finger protein [Capsicum annuum] Length = 484 Score = 58.9 bits (141), Expect = 2e-06 Identities = 30/48 (62%), Positives = 37/48 (77%), Gaps = 4/48 (8%) Frame = +2 Query: 755 NWYPSPPQPPAAKH----KLQRRYSRIADNYNSLDEVTKDLAQSGLES 886 ++ P+PPQ A H +L RRYSRIADNYNSLDEVT+ LA++GLES Sbjct: 65 SYAPAPPQQNYASHASRPRLDRRYSRIADNYNSLDEVTEALARAGLES 112