BLASTX nr result
ID: Ephedra26_contig00008582
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00008582
(425 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006827799.1| hypothetical protein AMTR_s00009p00267190 [A... 69 1e-12
ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Sela... 56 1e-10
gb|ESW20610.1| hypothetical protein PHAVU_005G001300g [Phaseolus... 55 2e-10
ref|XP_003527581.1| PREDICTED: splicing factor U2af large subuni... 54 3e-10
ref|XP_006582437.1| PREDICTED: splicing factor U2af large subuni... 54 3e-10
ref|XP_006582439.1| PREDICTED: splicing factor U2af large subuni... 54 3e-10
ref|XP_006377333.1| hypothetical protein POPTR_0011s04990g [Popu... 50 1e-09
ref|XP_002329812.1| predicted protein [Populus trichocarpa] 50 1e-09
ref|XP_004499572.1| PREDICTED: splicing factor U2af large subuni... 55 1e-09
ref|XP_004499573.1| PREDICTED: splicing factor U2af large subuni... 55 1e-09
ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Sela... 53 1e-09
ref|XP_004506427.1| PREDICTED: splicing factor U2af large subuni... 52 2e-09
ref|XP_006449309.1| hypothetical protein CICLE_v10014912mg [Citr... 55 2e-09
ref|XP_004499574.1| PREDICTED: splicing factor U2af large subuni... 55 3e-09
ref|XP_001767993.1| predicted protein [Physcomitrella patens] gi... 49 3e-09
ref|XP_006346938.1| PREDICTED: splicing factor U2af large subuni... 55 4e-09
ref|XP_006346939.1| PREDICTED: splicing factor U2af large subuni... 55 4e-09
ref|XP_002305148.2| hypothetical protein POPTR_0004s04100g [Popu... 48 4e-09
ref|XP_006346940.1| PREDICTED: splicing factor U2af large subuni... 55 4e-09
ref|XP_003605459.1| Splicing factor U2af large subunit B [Medica... 52 7e-09
>ref|XP_006827799.1| hypothetical protein AMTR_s00009p00267190 [Amborella trichopoda]
gi|548832419|gb|ERM95215.1| hypothetical protein
AMTR_s00009p00267190 [Amborella trichopoda]
Length = 491
Score = 68.6 bits (166), Expect(2) = 1e-12
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Frame = -2
Query: 382 AALNGFKMGDKALTILHGTV-TEQPKPDQDIILQ*V*LHVAML*FALQ--GSISSTFLLI 212
AALNG KMGDK LT+ T T Q KPDQ+IIL H+A+ LQ G+ +
Sbjct: 322 AALNGLKMGDKTLTVRRATASTGQAKPDQEIILAQAQQHIALQKLVLQAGGAAVPGVAVT 381
Query: 211 VHANPAKVVCLI*IVSVVELRDDEVFQD 128
V NP KV+CL +VS EL+DDE +++
Sbjct: 382 VSENPTKVLCLTEVVSADELQDDEEYEE 409
Score = 29.6 bits (65), Expect(2) = 1e-12
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 141 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
++ +IL+DMREE KFG + VV P+ + + G +F
Sbjct: 406 EYEEILEDMREEGRKFGPLTTVVIPRPSPDGQPTPGLGKVF 446
>ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
gi|300142484|gb|EFJ09184.1| hypothetical protein
SELMODRAFT_160385 [Selaginella moellendorffii]
Length = 421
Score = 56.2 bits (134), Expect(2) = 1e-10
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Frame = -2
Query: 382 AALNGFKMGDKALTILHGTV---TEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFL-- 218
AALNG KMGDK LT+ T + QPKPDQ +L +A+ ALQG+ +
Sbjct: 242 AALNGLKMGDKTLTVRRATASVHSGQPKPDQANVLAQAQQQIALQKLALQGAPYYNMMMP 301
Query: 217 -----LIVHANPAKVVCLI*IVSVVELRDDEVFQD 128
+ + P KVVCL +VS EL++D+ +++
Sbjct: 302 GVDNGMTMPETPTKVVCLKQVVSPDELKEDDEYEE 336
Score = 35.4 bits (80), Expect(2) = 1e-10
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = -3
Query: 141 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
++ +IL+DMREEC K+G+V +V P + E+ G +F
Sbjct: 333 EYEEILEDMREECGKYGSVATLVLPRPKSDGEEVAGVGKVF 373
>gb|ESW20610.1| hypothetical protein PHAVU_005G001300g [Phaseolus vulgaris]
Length = 599
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = -2
Query: 382 AALNGFKMGDKALTIL---HGTVTEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFLLI 212
AALNG KMGDK LT+ G +QPKP+Q+ IL +A+ LQ ++ +T
Sbjct: 442 AALNGIKMGDKTLTVRRANQGANPQQPKPEQESILMHAQQQIALQKLMLQPALVAT---- 497
Query: 211 VHANPAKVVCLI*IVSVVELRDDEVFQD 128
KVVCL VS EL+DDE +++
Sbjct: 498 ------KVVCLTHAVSADELKDDEDYEE 519
Score = 35.4 bits (80), Expect(2) = 2e-10
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -3
Query: 138 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
+ +I+DDMR+EC KFGT+ VV P + E G +F
Sbjct: 517 YEEIVDDMRQECSKFGTLVNVVIPRPPHDGEPAAGVGKVF 556
>ref|XP_003527581.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Glycine max]
Length = 605
Score = 53.9 bits (128), Expect(2) = 3e-10
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = -2
Query: 382 AALNGFKMGDKALTIL---HGTVTEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFLLI 212
AALNG KMGDK LT+ G +QPKP+Q+ IL +A+ LQ ++ +T
Sbjct: 448 AALNGIKMGDKTLTVRRANQGANPQQPKPEQESILMHAQQQIALQKLMLQPALVAT---- 503
Query: 211 VHANPAKVVCLI*IVSVVELRDDEVFQD 128
KVVCL VS EL+DDE + +
Sbjct: 504 ------KVVCLTHAVSSDELKDDEDYDE 525
Score = 36.2 bits (82), Expect(2) = 3e-10
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -3
Query: 138 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
+ +ILDDMR+EC KFGT+ VV P + E G +F
Sbjct: 523 YDEILDDMRQECSKFGTLVNVVIPRPPPDGEPAAGVGKVF 562
>ref|XP_006582437.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Glycine max] gi|571462974|ref|XP_006582438.1|
PREDICTED: splicing factor U2af large subunit B-like
isoform X3 [Glycine max]
Length = 409
Score = 53.9 bits (128), Expect(2) = 3e-10
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = -2
Query: 382 AALNGFKMGDKALTIL---HGTVTEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFLLI 212
AALNG KMGDK LT+ G +QPKP+Q+ IL +A+ LQ ++ +T
Sbjct: 252 AALNGIKMGDKTLTVRRANQGANPQQPKPEQESILMHAQQQIALQKLMLQPALVAT---- 307
Query: 211 VHANPAKVVCLI*IVSVVELRDDEVFQD 128
KVVCL VS EL+DDE + +
Sbjct: 308 ------KVVCLTHAVSSDELKDDEDYDE 329
Score = 36.2 bits (82), Expect(2) = 3e-10
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -3
Query: 138 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
+ +ILDDMR+EC KFGT+ VV P + E G +F
Sbjct: 327 YDEILDDMRQECSKFGTLVNVVIPRPPPDGEPAAGVGKVF 366
>ref|XP_006582439.1| PREDICTED: splicing factor U2af large subunit B-like isoform X4
[Glycine max]
Length = 372
Score = 53.9 bits (128), Expect(2) = 3e-10
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = -2
Query: 382 AALNGFKMGDKALTIL---HGTVTEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFLLI 212
AALNG KMGDK LT+ G +QPKP+Q+ IL +A+ LQ ++ +T
Sbjct: 215 AALNGIKMGDKTLTVRRANQGANPQQPKPEQESILMHAQQQIALQKLMLQPALVAT---- 270
Query: 211 VHANPAKVVCLI*IVSVVELRDDEVFQD 128
KVVCL VS EL+DDE + +
Sbjct: 271 ------KVVCLTHAVSSDELKDDEDYDE 292
Score = 36.2 bits (82), Expect(2) = 3e-10
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -3
Query: 138 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
+ +ILDDMR+EC KFGT+ VV P + E G +F
Sbjct: 290 YDEILDDMRQECSKFGTLVNVVIPRPPPDGEPAAGVGKVF 329
>ref|XP_006377333.1| hypothetical protein POPTR_0011s04990g [Populus trichocarpa]
gi|550327621|gb|ERP55130.1| hypothetical protein
POPTR_0011s04990g [Populus trichocarpa]
Length = 395
Score = 49.7 bits (117), Expect(2) = 1e-09
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Frame = -2
Query: 382 AALNGFKMGDKALTILHGTVT-EQPKPDQDIILQ*V*LHVAML*FALQGSISS-----TF 221
AALNG KMGDK LT+ GT + Q + +Q+ IL H+A+ ALQ + +
Sbjct: 225 AALNGLKMGDKTLTVRRGTESGGQSRSEQENILAQAQQHIAIQKMALQAGVMNLPGVGIP 284
Query: 220 LLIVHANPAKVVCLI*IVSVVELRDDEVFQD 128
L +P+KV+CL +++ L DDE +++
Sbjct: 285 LAESSHSPSKVLCLTEAIAMEVLADDEEYEE 315
Score = 38.5 bits (88), Expect(2) = 1e-09
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -3
Query: 141 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
++ +IL+DMREEC KFGT+ VV P+Q E G +F
Sbjct: 312 EYEEILEDMREECCKFGTLINVVIPRPSQTEEQISGAGKVF 352
>ref|XP_002329812.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 49.7 bits (117), Expect(2) = 1e-09
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Frame = -2
Query: 382 AALNGFKMGDKALTILHGTVT-EQPKPDQDIILQ*V*LHVAML*FALQGSISS-----TF 221
AALNG KMGDK LT+ GT + Q + +Q+ IL H+A+ ALQ + +
Sbjct: 126 AALNGLKMGDKTLTVRRGTESGGQSRSEQENILAQAQQHIAIQKMALQAGVMNLPGVGIP 185
Query: 220 LLIVHANPAKVVCLI*IVSVVELRDDEVFQD 128
L +P+KV+CL +++ L DDE +++
Sbjct: 186 LAESSHSPSKVLCLTEAIAMEVLADDEEYEE 216
Score = 38.5 bits (88), Expect(2) = 1e-09
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -3
Query: 141 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
++ +IL+DMREEC KFGT+ VV P+Q E G +F
Sbjct: 213 EYEEILEDMREECCKFGTLINVVIPRPSQTEEQISGAGKVF 253
>ref|XP_004499572.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Cicer arietinum]
Length = 623
Score = 54.7 bits (130), Expect(2) = 1e-09
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = -2
Query: 382 AALNGFKMGDKALTIL---HGTVTEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFLLI 212
AALNG KMGDK LT+ GT QPKP+Q+ IL +A+ LQ ++ +T
Sbjct: 466 AALNGIKMGDKTLTVRRANQGTNPMQPKPEQESILMHAQQQIALQKLMLQPALVAT---- 521
Query: 211 VHANPAKVVCLI*IVSVVELRDDEVFQD 128
KV+CL VS EL+DDE +++
Sbjct: 522 ------KVLCLTHAVSADELKDDEDYEE 543
Score = 33.1 bits (74), Expect(2) = 1e-09
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -3
Query: 138 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
+ +ILDDMR+EC KFG + VV P + E G +F
Sbjct: 541 YEEILDDMRQECSKFGNLVNVVIPRPRPDGELCPGVGKVF 580
>ref|XP_004499573.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Cicer arietinum]
Length = 621
Score = 54.7 bits (130), Expect(2) = 1e-09
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = -2
Query: 382 AALNGFKMGDKALTIL---HGTVTEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFLLI 212
AALNG KMGDK LT+ GT QPKP+Q+ IL +A+ LQ ++ +T
Sbjct: 464 AALNGIKMGDKTLTVRRANQGTNPMQPKPEQESILMHAQQQIALQKLMLQPALVAT---- 519
Query: 211 VHANPAKVVCLI*IVSVVELRDDEVFQD 128
KV+CL VS EL+DDE +++
Sbjct: 520 ------KVLCLTHAVSADELKDDEDYEE 541
Score = 33.1 bits (74), Expect(2) = 1e-09
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -3
Query: 138 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
+ +ILDDMR+EC KFG + VV P + E G +F
Sbjct: 539 YEEILDDMRQECSKFGNLVNVVIPRPRPDGELCPGVGKVF 578
>ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
gi|300140455|gb|EFJ07178.1| hypothetical protein
SELMODRAFT_161898 [Selaginella moellendorffii]
Length = 420
Score = 53.1 bits (126), Expect(2) = 1e-09
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Frame = -2
Query: 382 AALNGFKMGDKALTILHGTV---TEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFL-- 218
AALNG KMGDK LT+ T + QPKPDQ +L +A L ALQG+ +
Sbjct: 242 AALNGLKMGDKTLTVRRATASVHSGQPKPDQANVLAQAQQQIA-LQLALQGAPYYNMMMP 300
Query: 217 -----LIVHANPAKVVCLI*IVSVVELRDDEVFQD 128
+ + P KVVCL +VS EL++D+ +++
Sbjct: 301 GVDNGMTMPETPTKVVCLKQVVSPDELKEDDEYEE 335
Score = 34.7 bits (78), Expect(2) = 1e-09
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -3
Query: 141 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
++ +IL+DMREEC K+G+V +V P E+ G +F
Sbjct: 332 EYEEILEDMREECGKYGSVATLVLPRPKSNGEEVAGVGKVF 372
>ref|XP_004506427.1| PREDICTED: splicing factor U2af large subunit B-like [Cicer
arietinum]
Length = 576
Score = 52.0 bits (123), Expect(2) = 2e-09
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = -2
Query: 382 AALNGFKMGDKALTILHGTV-TEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFLLIVH 206
AALNG KMGDK LT+ T QPKP+Q+ IL +A+ Q ++ +T
Sbjct: 421 AALNGIKMGDKTLTVRRANQGTTQPKPEQESILMHAQQQIALQKLIFQPALVAT------ 474
Query: 205 ANPAKVVCLI*IVSVVELRDDEVFQD 128
KVVCL VS EL++DE F +
Sbjct: 475 ----KVVCLTNAVSPDELKEDEDFDE 496
Score = 35.0 bits (79), Expect(2) = 2e-09
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -3
Query: 138 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
F +I+DDMR+EC KFGT+ VV P + + G +F
Sbjct: 494 FDEIIDDMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVF 533
>ref|XP_006449309.1| hypothetical protein CICLE_v10014912mg [Citrus clementina]
gi|557551920|gb|ESR62549.1| hypothetical protein
CICLE_v10014912mg [Citrus clementina]
Length = 521
Score = 54.7 bits (130), Expect(2) = 2e-09
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = -2
Query: 382 AALNGFKMGDKALTILHGTVTEQPKPDQDIILQ*V*LHVAML*FALQGSISSTF---LLI 212
AALNG KMGDK LT+ T + Q K +Q+ IL H+A+ ALQ S +T + +
Sbjct: 354 AALNGLKMGDKTLTVRRATASGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSL 413
Query: 211 VHANPAKVVCLI*IVSVVELRDDEVFQD 128
AKV+CL ++ L DDE +++
Sbjct: 414 FGETLAKVLCLTEAITADALADDEEYEE 441
Score = 32.3 bits (72), Expect(2) = 2e-09
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -3
Query: 141 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
++ +IL+DMREEC K+GT+ VV P + G +F
Sbjct: 438 EYEEILEDMREECGKYGTLVNVVIPRPDPNGGETPGVGKVF 478
>ref|XP_004499574.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
[Cicer arietinum]
Length = 582
Score = 54.7 bits (130), Expect(2) = 3e-09
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = -2
Query: 382 AALNGFKMGDKALTIL---HGTVTEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFLLI 212
AALNG KMGDK LT+ GT QPKP+Q+ IL +A+ LQ ++ +T
Sbjct: 466 AALNGIKMGDKTLTVRRANQGTNPMQPKPEQESILMHAQQQIALQKLMLQPALVAT---- 521
Query: 211 VHANPAKVVCLI*IVSVVELRDDEVFQD 128
KV+CL VS EL+DDE +++
Sbjct: 522 ------KVLCLTHAVSADELKDDEDYEE 543
Score = 32.0 bits (71), Expect(2) = 3e-09
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -3
Query: 138 FSKILDDMREECDKFGTVDIVVGLDPAQERE 46
+ +ILDDMR+EC KFG + VV P + E
Sbjct: 541 YEEILDDMRQECSKFGNLVNVVIPRPRPDGE 571
>ref|XP_001767993.1| predicted protein [Physcomitrella patens]
gi|162680835|gb|EDQ67268.1| predicted protein
[Physcomitrella patens]
Length = 499
Score = 49.3 bits (116), Expect(2) = 3e-09
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Frame = -2
Query: 382 AALNGFKMGDKALTILHGTVT---EQPKPDQ-DIILQ*V*LHVAML*FALQGSISSTFLL 215
AALNG KMGD+ LT+ + QPKPDQ +II+Q A ALQ + T
Sbjct: 345 AALNGLKMGDRTLTVRRASARLRFGQPKPDQSNIIVQ------AQQQIALQVAAPET--- 395
Query: 214 IVHANPAKVVCLI*IVSVVELRDDEVFQD 128
KV+CL +VS+V+L+DD F +
Sbjct: 396 -----ATKVICLSQVVSIVDLKDDVEFDE 419
Score = 37.4 bits (85), Expect(2) = 3e-09
Identities = 16/42 (38%), Positives = 29/42 (69%)
Frame = -3
Query: 144 MKFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
++F +I++DM+EEC K+G++ VV P+ + ED G++F
Sbjct: 415 VEFDEIVEDMKEECGKYGSLLNVVIPRPSYDEEDVPGIGMVF 456
>ref|XP_006346938.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Solanum tuberosum]
Length = 561
Score = 55.1 bits (131), Expect(2) = 4e-09
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = -2
Query: 382 AALNGFKMGDKALTILHGTV-TEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFLLIVH 206
AALNG KMGDK LT+ T QPKP+Q+ +L +A+ F LQ +T
Sbjct: 406 AALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRFMLQPGALAT------ 459
Query: 205 ANPAKVVCLI*IVSVVELRDDEVFQD 128
KV+CL +V V EL +DE +QD
Sbjct: 460 ----KVLCLTQVVEVDELSNDEDYQD 481
Score = 31.2 bits (69), Expect(2) = 4e-09
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 138 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
+ IL+DMR EC KFG + VV P+ + E G +F
Sbjct: 479 YQDILEDMRTECGKFGPLVNVVIPRPSPDGEHAPGVGKVF 518
>ref|XP_006346939.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Solanum tuberosum]
Length = 560
Score = 55.1 bits (131), Expect(2) = 4e-09
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = -2
Query: 382 AALNGFKMGDKALTILHGTV-TEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFLLIVH 206
AALNG KMGDK LT+ T QPKP+Q+ +L +A+ F LQ +T
Sbjct: 405 AALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRFMLQPGALAT------ 458
Query: 205 ANPAKVVCLI*IVSVVELRDDEVFQD 128
KV+CL +V V EL +DE +QD
Sbjct: 459 ----KVLCLTQVVEVDELSNDEDYQD 480
Score = 31.2 bits (69), Expect(2) = 4e-09
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 138 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
+ IL+DMR EC KFG + VV P+ + E G +F
Sbjct: 478 YQDILEDMRTECGKFGPLVNVVIPRPSPDGEHAPGVGKVF 517
>ref|XP_002305148.2| hypothetical protein POPTR_0004s04100g [Populus trichocarpa]
gi|550340286|gb|EEE85659.2| hypothetical protein
POPTR_0004s04100g [Populus trichocarpa]
Length = 545
Score = 47.8 bits (112), Expect(2) = 4e-09
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Frame = -2
Query: 382 AALNGFKMGDKALTILHGTVT-EQPKPDQDIILQ*V*LHVAML*FALQGSISS-----TF 221
AALNG KMGDK LT+ T + Q K +Q+ IL H+A+ ALQ + +
Sbjct: 375 AALNGLKMGDKTLTVRRATESGGQSKSEQENILAQAQQHIAIQKMALQAGVMNLPGVGIP 434
Query: 220 LLIVHANPAKVVCLI*IVSVVELRDDEVFQD 128
L P+KV+CL +++ L DDE +++
Sbjct: 435 LAESAYTPSKVLCLTEAITMEVLADDEEYEE 465
Score = 38.5 bits (88), Expect(2) = 4e-09
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -3
Query: 141 KFSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
++ +IL+DMREEC KFGT+ VV P+Q E G +F
Sbjct: 462 EYEEILEDMREECCKFGTLINVVIPRPSQNEEKMPGAGKVF 502
>ref|XP_006346940.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
[Solanum tuberosum] gi|565360367|ref|XP_006346941.1|
PREDICTED: splicing factor U2af large subunit B-like
isoform X4 [Solanum tuberosum]
gi|565360369|ref|XP_006346942.1| PREDICTED: splicing
factor U2af large subunit B-like isoform X5 [Solanum
tuberosum]
Length = 368
Score = 55.1 bits (131), Expect(2) = 4e-09
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = -2
Query: 382 AALNGFKMGDKALTILHGTV-TEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFLLIVH 206
AALNG KMGDK LT+ T QPKP+Q+ +L +A+ F LQ +T
Sbjct: 213 AALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRFMLQPGALAT------ 266
Query: 205 ANPAKVVCLI*IVSVVELRDDEVFQD 128
KV+CL +V V EL +DE +QD
Sbjct: 267 ----KVLCLTQVVEVDELSNDEDYQD 288
Score = 31.2 bits (69), Expect(2) = 4e-09
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 138 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
+ IL+DMR EC KFG + VV P+ + E G +F
Sbjct: 286 YQDILEDMRTECGKFGPLVNVVIPRPSPDGEHAPGVGKVF 325
>ref|XP_003605459.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355506514|gb|AES87656.1| Splicing factor U2af large
subunit B [Medicago truncatula]
Length = 634
Score = 52.0 bits (123), Expect(2) = 7e-09
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = -2
Query: 382 AALNGFKMGDKALTILHGTV-TEQPKPDQDIILQ*V*LHVAML*FALQGSISSTFLLIVH 206
AALNG KMGDK LT+ T QPKP+Q+ IL +A+ Q ++ +T
Sbjct: 479 AALNGIKMGDKTLTVRRANQGTTQPKPEQESILMHAQQQIALQKLIFQPALVAT------ 532
Query: 205 ANPAKVVCLI*IVSVVELRDDEVFQD 128
KVVCL V+ EL++DE F++
Sbjct: 533 ----KVVCLTNAVAPEELKEDEDFEE 554
Score = 33.5 bits (75), Expect(2) = 7e-09
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 138 FSKILDDMREECDKFGTVDIVVGLDPAQEREDHDRTGLIF 19
F +I+DDMR+EC KFG++ VV P + + G +F
Sbjct: 552 FEEIIDDMRQECSKFGSLVNVVIPRPQPDGDLSGGVGKVF 591