BLASTX nr result

ID: Ephedra26_contig00008575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00008575
         (986 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77021.1| unknown [Picea sitchensis]                             131   3e-28
ref|XP_006859207.1| hypothetical protein AMTR_s00070p00188780 [A...    64   7e-08
ref|XP_001771284.1| predicted protein [Physcomitrella patens] gi...    62   4e-07
ref|XP_001758113.1| predicted protein [Physcomitrella patens] gi...    60   2e-06

>gb|ADE77021.1| unknown [Picea sitchensis]
          Length = 305

 Score =  131 bits (330), Expect = 3e-28
 Identities = 87/230 (37%), Positives = 127/230 (55%), Gaps = 28/230 (12%)
 Frame = +2

Query: 5   QQQLQVNSSWMMMDPSVMMGATSFPYQISVPQ-THIPLSNNQNSLGPSELQTSL-AMPPF 178
           QQ +++ SSWMMMDP+V+M A SFPY ++VPQ T +P SN Q  +  ++LQ  L A PP+
Sbjct: 77  QQHIRIISSWMMMDPAVIMSAASFPYSLAVPQATPVPSSNCQQPVMSNQLQRPLVAPPPY 136

Query: 179 IPIATIGGFPVHPRLHTYGAFANT---------QLPQFCNPFSNNSHVERPYAQYPTPLH 331
           +P+ATIG FP+HP LHTY AF N+         Q P +    + + HVER  +Q    LH
Sbjct: 137 VPLATIGAFPLHPGLHTYAAFGNSHADGSSPYLQFPNYGPSLNGHCHVERHSSQ----LH 192

Query: 332 PMHSYAAEVLPQHGSELP-TAYAQNIE-----AKKQSIASLENQNQPGLACSSNVELSAG 493
           PM  + +++  Q G + P ++   ++E     A   S A+++ Q++     S N++   G
Sbjct: 193 PMPPFLSQMQCQQGCQAPVSSSGPSVEICKSCASVASTAAVKTQDKSSHVSSQNMDDEGG 252

Query: 494 GKISISGSQVHTSVVG-----------DSDEVGNDKRPENLLSGLSSISE 610
           GK + S S V  +VV             S+ + ND   E L S  SSISE
Sbjct: 253 GKYASSPSPVDDAVVEHRDFCRIEVSCGSETLPNDMNKELLSSFSSSISE 302


>ref|XP_006859207.1| hypothetical protein AMTR_s00070p00188780 [Amborella trichopoda]
           gi|548863320|gb|ERN20674.1| hypothetical protein
           AMTR_s00070p00188780 [Amborella trichopoda]
          Length = 401

 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
 Frame = +2

Query: 5   QQQLQVNSSWMMMDPSVMMGATSFPYQISVPQTHIPLSNNQNSLGPSELQTSLAMPPFIP 184
           QQ++ V   W  MDP+V MG T +P+    P   +   ++Q +  P++     +M PF+P
Sbjct: 144 QQRIAVMFPWAPMDPTVAMGPTPYPF----PMPTLATPDSQRT--PTQGHAQASMTPFMP 197

Query: 185 IATIGGFPVHPRLHTYGAFANTQ---------LPQFCNPFSNNSHVERPYAQYPTPLHPM 337
           +      P HP +  +  F +           L  + +  + +SHVERP AQYP+P+ P+
Sbjct: 198 V------PFHPSIQPFPFFRSVDPSGNNQYLSLTPYASTVNVHSHVERPSAQYPSPVPPL 251

Query: 338 HSYAAEVLP 364
             +  ++ P
Sbjct: 252 PGFVLQLQP 260


>ref|XP_001771284.1| predicted protein [Physcomitrella patens]
           gi|162677373|gb|EDQ63844.1| predicted protein
           [Physcomitrella patens]
          Length = 645

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 21/142 (14%)
 Frame = +2

Query: 2   IQQQLQVNSSWMMMDPSV-MMGATSFPYQ----ISVPQTHIPLSNNQNSLGPSELQTSLA 166
           +QQ+LQ    W+ MDP+  +MGA  +PY     + VPQ   P S+   S  P   + + A
Sbjct: 301 LQQRLQGMLPWISMDPTAALMGAPPYPYPHPHPMPVPQ---PPSSAVPSSTPPASEPAPA 357

Query: 167 MP----------PFIPIATIGGFPVHPRLHTYGAFANTQ------LPQFCNPFSNNSHVE 298
           +P          PF+ +A  G + +HP    YGA    +       P +     N+SHVE
Sbjct: 358 VPTSQPPVVGPSPFLSLAPPGVY-MHPYA-IYGARPPERGHPYMPYPPYSASVGNHSHVE 415

Query: 299 RPYAQYPTPLHPMHSYAAEVLP 364
           RPYAQYP+P+  M  Y  ++ P
Sbjct: 416 RPYAQYPSPMSTMPGYMVQMQP 437


>ref|XP_001758113.1| predicted protein [Physcomitrella patens]
           gi|162690569|gb|EDQ76935.1| predicted protein
           [Physcomitrella patens]
          Length = 514

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 16/137 (11%)
 Frame = +2

Query: 2   IQQQLQVNSSWMMMDPSV-MMGATSFPYQISVPQTHIPLSNNQNSLGPSE--------LQ 154
           +QQ+L+    W+ MDP+  +MGA  +PY   +P    P S   +S  P+          Q
Sbjct: 205 LQQRLRGMLPWISMDPTAALMGAPPYPYPHPMPVPQPPPSPPPSSTPPASESASGLTTSQ 264

Query: 155 TSLAMP-PFIPIATIGGFPVHPRLHTYGAFANT------QLPQFCNPFSNNSHVERPYAQ 313
            S+  P PF+ +A  G + +HP    YGA +          P +     N+S VERPYAQ
Sbjct: 265 PSVVGPSPFLSLAPPGVY-MHPYA-MYGARSPDGGHPYMPYPPYPGSVGNHSQVERPYAQ 322

Query: 314 YPTPLHPMHSYAAEVLP 364
           YP+P+  M  Y  ++ P
Sbjct: 323 YPSPIPTMPGYLVQMQP 339


Top