BLASTX nr result

ID: Ephedra26_contig00008493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00008493
         (894 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18400.1| unknown [Picea sitchensis]                              73   2e-10
gb|ABK22057.1| unknown [Picea sitchensis]                              66   2e-08

>gb|ABR18400.1| unknown [Picea sitchensis]
          Length = 115

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 47/123 (38%), Positives = 67/123 (54%)
 Frame = -1

Query: 759 MSLACLSCHNVGRTDSDLRAYSLKAITEDERRWRPSTGCWXXXXXXXXXXXPQNFENSRS 580
           MSLACL+C NV RTDS  R YS ++  E++++   S GCW                +++ 
Sbjct: 1   MSLACLTCQNVLRTDS-CRNYSFRS-DEEQQQTGSSMGCW----------------SNKK 42

Query: 579 NTTNKNEENLRRTASADIYGSVGGTNRHCNVGEGYSSEAESSPRLVRSHAVRRHIFRDFN 400
           N      EN  RT  A +  S GG + +   G   +   +S+P+L+R HAVRR IFRD++
Sbjct: 43  NPQPPAAENTLRTRVAPVPPSGGGISNNIT-GSSSNQAPDSNPKLMRCHAVRRDIFRDWH 101

Query: 399 FED 391
           FED
Sbjct: 102 FED 104


>gb|ABK22057.1| unknown [Picea sitchensis]
          Length = 103

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 46/126 (36%), Positives = 61/126 (48%)
 Frame = -1

Query: 759 MSLACLSCHNVGRTDSDLRAYSLKAITEDERRWRPSTGCWXXXXXXXXXXXPQNFENSRS 580
           MSLACL+C  V RTDSDLR+YS    ++ E+R     GCW                    
Sbjct: 1   MSLACLTCQVVQRTDSDLRSYSFN--SQQEQRCGAVVGCW-------------------- 38

Query: 579 NTTNKNEENLRRTASADIYGSVGGTNRHCNVGEGYSSEAESSPRLVRSHAVRRHIFRDFN 400
           +T N  +  L    SA +   +  +N + N G         SPRL R HAVRR I RD+N
Sbjct: 39  STKNPRQPPLEE-VSARVVPVLSNSNSNNNQG-------PVSPRLTRCHAVRRDILRDWN 90

Query: 399 FEDVSD 382
           FE+ ++
Sbjct: 91  FEEFAE 96


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