BLASTX nr result
ID: Ephedra26_contig00008174
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra26_contig00008174 (632 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI27412.3| unnamed protein product [Vitis vinifera] 242 7e-62 ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 242 7e-62 gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe... 236 3e-60 gb|EXB44918.1| DNA-directed RNA polymerase 1 [Morus notabilis] 235 9e-60 ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 235 9e-60 ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 235 9e-60 dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa... 233 3e-59 ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g... 233 3e-59 gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo... 233 3e-59 ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 231 2e-58 ref|XP_002315996.2| DNA-directed RNA polymerase family protein [... 230 2e-58 ref|NP_001104931.1| RNA polymerase T phage-like 1 [Zea mays] gi|... 230 2e-58 sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras... 230 3e-58 tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays] 230 3e-58 gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma ... 229 4e-58 gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 229 4e-58 sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 228 8e-58 ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S... 228 1e-57 emb|CAE52834.1| RNA polymerase [Hordeum vulgare] 228 1e-57 dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 227 2e-57 >emb|CBI27412.3| unnamed protein product [Vitis vinifera] Length = 810 Score = 242 bits (617), Expect = 7e-62 Identities = 121/211 (57%), Positives = 153/211 (72%), Gaps = 3/211 (1%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSE---IQVVTKPQEDASSVKEELLRQK 171 VV AA +GEA+EHEV++QRF+ +KK + N+ VTK QE LR+K Sbjct: 79 VVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPVTKEQEK--------LRKK 130 Query: 172 ITQLLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPP 351 ++ L+KK K + VRQI+ + D +KPW KVGS L++LLI+TA+IQPPADQ +GPP Sbjct: 131 VSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPP 190 Query: 352 EIRPAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKG 531 +IRPAF H KT + E K TR+YGVIECD LV++GLE+TARH+VIPYMPMLV P W G Sbjct: 191 DIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTG 250 Query: 532 FDKGPYLFLPSYVMRIHGAKKQREALKRVSR 624 +DKG YLFLPSYVMRIHGA++QREA+KR R Sbjct: 251 YDKGAYLFLPSYVMRIHGARQQREAIKRAPR 281 >ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis vinifera] Length = 978 Score = 242 bits (617), Expect = 7e-62 Identities = 121/211 (57%), Positives = 153/211 (72%), Gaps = 3/211 (1%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSE---IQVVTKPQEDASSVKEELLRQK 171 VV AA +GEA+EHEV++QRF+ +KK + N+ VTK QE LR+K Sbjct: 247 VVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPVTKEQEK--------LRKK 298 Query: 172 ITQLLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPP 351 ++ L+KK K + VRQI+ + D +KPW KVGS L++LLI+TA+IQPPADQ +GPP Sbjct: 299 VSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPP 358 Query: 352 EIRPAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKG 531 +IRPAF H KT + E K TR+YGVIECD LV++GLE+TARH+VIPYMPMLV P W G Sbjct: 359 DIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTG 418 Query: 532 FDKGPYLFLPSYVMRIHGAKKQREALKRVSR 624 +DKG YLFLPSYVMRIHGA++QREA+KR R Sbjct: 419 YDKGAYLFLPSYVMRIHGARQQREAIKRAPR 449 >gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica] Length = 1024 Score = 236 bits (603), Expect = 3e-60 Identities = 117/210 (55%), Positives = 151/210 (71%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQVVTKPQEDASSVKEELLRQKITQ 180 VV AA +GEA+E EV++ +FL ++K K K+ E + DA+ + E L +K+T Sbjct: 293 VVAAACTIGEAIEQEVRIHKFLEMTRKKKVDKDQE-----NGESDAAKKEREKLNKKVTN 347 Query: 181 LLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPPEIR 360 L+KK K K VR I++K+D +K W +AKVGS L++LL QTAFIQPPADQ +GPP+IR Sbjct: 348 LMKKQKLKAVRGIVSKHDASKSWSLEARAKVGSRLIELLTQTAFIQPPADQLADGPPDIR 407 Query: 361 PAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKGFDK 540 PAF H F+T + +R+YGVIECD LV +GLE+TARH+VIPYMPMLV P W G+DK Sbjct: 408 PAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARHMVIPYMPMLVPPLNWTGYDK 467 Query: 541 GPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 G Y FLPSYVMRIHGA++QREA+KR R Q Sbjct: 468 GGYFFLPSYVMRIHGARQQREAIKRTPREQ 497 >gb|EXB44918.1| DNA-directed RNA polymerase 1 [Morus notabilis] Length = 1023 Score = 235 bits (599), Expect = 9e-60 Identities = 117/209 (55%), Positives = 153/209 (73%), Gaps = 4/209 (1%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQ----VVTKPQEDASSVKEELLRQ 168 VV AA ++GEA+EHEVK+QRF +KK KK KN+ + VV+ Q + + +E LR+ Sbjct: 260 VVQAASQIGEALEHEVKIQRFFEKTKKKKKKKNTNGEDVSDVVSAEQGNLNGKGQEKLRK 319 Query: 169 KITQLLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGP 348 K+TQ++KK K + VR I+++ D +KPW KVG L+ LL++TA+IQPP DQ + P Sbjct: 320 KVTQMIKKQKVQQVRIIVDRVDDSKPWGQEGHVKVGCRLIQLLMETAYIQPPVDQLDDSP 379 Query: 349 PEIRPAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWK 528 P+IRPAF H KT V + K +R+YGVIECD LV++GLE+TARH+VIPYMPMLV N W Sbjct: 380 PDIRPAFVHSLKTVVKDTRKTSRRYGVIECDPLVRRGLEKTARHMVIPYMPMLVPANKWT 439 Query: 529 GFDKGPYLFLPSYVMRIHGAKKQREALKR 615 G+DKG YLFLPS VMR HGAK+QREA+KR Sbjct: 440 GYDKGAYLFLPSQVMRTHGAKQQREAVKR 468 >ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform X2 [Oryza brachyantha] Length = 839 Score = 235 bits (599), Expect = 9e-60 Identities = 112/210 (53%), Positives = 156/210 (74%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQVVTKPQEDASSVKEELLRQKITQ 180 V+ AA ++GEA+EHEV++ +FL +KPKK ++ E+ + + ++E LR+K+T Sbjct: 106 VIQAACQIGEAIEHEVRLHKFL---EKPKKKRSKEMDNEEEVGCSDIAKEQERLRKKVTD 162 Query: 181 LLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPPEIR 360 L+KK+K + VR I+ K D +KPW AKVGS L++L+I+TA+IQPPA Q +GPP+IR Sbjct: 163 LMKKHKLRQVRYIVKKQDNSKPWGQDVHAKVGSRLIELMIETAYIQPPASQSADGPPDIR 222 Query: 361 PAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKGFDK 540 PAF H +T E+ K +R+YGVI+CD LV+QGL+RTA+H+VIPYMPML+ P W G+DK Sbjct: 223 PAFTHEMRTVAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDK 282 Query: 541 GPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 G +LFLPSYVMR HGA++QREA+KR R Q Sbjct: 283 GAHLFLPSYVMRTHGARQQREAVKRAPREQ 312 >ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform X1 [Oryza brachyantha] Length = 703 Score = 235 bits (599), Expect = 9e-60 Identities = 112/210 (53%), Positives = 156/210 (74%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQVVTKPQEDASSVKEELLRQKITQ 180 V+ AA ++GEA+EHEV++ +FL +KPKK ++ E+ + + ++E LR+K+T Sbjct: 79 VIQAACQIGEAIEHEVRLHKFL---EKPKKKRSKEMDNEEEVGCSDIAKEQERLRKKVTD 135 Query: 181 LLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPPEIR 360 L+KK+K + VR I+ K D +KPW AKVGS L++L+I+TA+IQPPA Q +GPP+IR Sbjct: 136 LMKKHKLRQVRYIVKKQDNSKPWGQDVHAKVGSRLIELMIETAYIQPPASQSADGPPDIR 195 Query: 361 PAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKGFDK 540 PAF H +T E+ K +R+YGVI+CD LV+QGL+RTA+H+VIPYMPML+ P W G+DK Sbjct: 196 PAFTHEMRTVAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDK 255 Query: 541 GPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 G +LFLPSYVMR HGA++QREA+KR R Q Sbjct: 256 GAHLFLPSYVMRTHGARQQREAVKRAPREQ 285 >dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group] gi|48716846|dbj|BAD23544.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group] gi|215694941|dbj|BAG90132.1| unnamed protein product [Oryza sativa Japonica Group] Length = 951 Score = 233 bits (595), Expect = 3e-59 Identities = 110/210 (52%), Positives = 154/210 (73%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQVVTKPQEDASSVKEELLRQKITQ 180 V+ AA ++GEA+EHEV++ +FL +K KK N E+ + + + ++E LR+K+T Sbjct: 284 VIQAACQIGEAIEHEVRIHKFL---EKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTD 340 Query: 181 LLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPPEIR 360 L+KK K + VR I+ K D +KPW AKVGS L++L+I+TA+IQPPA Q +GPP+IR Sbjct: 341 LMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIR 400 Query: 361 PAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKGFDK 540 PAF H +T E+ K +R+YGVI+CD LV+QGL+RTA+H+VIPYMPML+ P W G+DK Sbjct: 401 PAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDK 460 Query: 541 GPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 G +LFLPSYVMR HGA++QR+A++R R Q Sbjct: 461 GAHLFLPSYVMRTHGARQQRDAVRRAPREQ 490 >ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type single subunit RNA polymerase [Oryza sativa Japonica Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza sativa Japonica Group] Length = 1017 Score = 233 bits (595), Expect = 3e-59 Identities = 110/210 (52%), Positives = 154/210 (73%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQVVTKPQEDASSVKEELLRQKITQ 180 V+ AA ++GEA+EHEV++ +FL +K KK N E+ + + + ++E LR+K+T Sbjct: 284 VIQAACQIGEAIEHEVRIHKFL---EKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTD 340 Query: 181 LLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPPEIR 360 L+KK K + VR I+ K D +KPW AKVGS L++L+I+TA+IQPPA Q +GPP+IR Sbjct: 341 LMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIR 400 Query: 361 PAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKGFDK 540 PAF H +T E+ K +R+YGVI+CD LV+QGL+RTA+H+VIPYMPML+ P W G+DK Sbjct: 401 PAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDK 460 Query: 541 GPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 G +LFLPSYVMR HGA++QR+A++R R Q Sbjct: 461 GAHLFLPSYVMRTHGARQQRDAVRRAPREQ 490 >gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group] Length = 983 Score = 233 bits (595), Expect = 3e-59 Identities = 110/210 (52%), Positives = 154/210 (73%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQVVTKPQEDASSVKEELLRQKITQ 180 V+ AA ++GEA+EHEV++ +FL +K KK N E+ + + + ++E LR+K+T Sbjct: 250 VIQAACQIGEAIEHEVRIHKFL---EKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTD 306 Query: 181 LLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPPEIR 360 L+KK K + VR I+ K D +KPW AKVGS L++L+I+TA+IQPPA Q +GPP+IR Sbjct: 307 LMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIR 366 Query: 361 PAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKGFDK 540 PAF H +T E+ K +R+YGVI+CD LV+QGL+RTA+H+VIPYMPML+ P W G+DK Sbjct: 367 PAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDK 426 Query: 541 GPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 G +LFLPSYVMR HGA++QR+A++R R Q Sbjct: 427 GAHLFLPSYVMRTHGARQQRDAVRRAPREQ 456 >ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa] gi|550332836|gb|EEE88785.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa] Length = 988 Score = 231 bits (588), Expect = 2e-58 Identities = 116/217 (53%), Positives = 159/217 (73%), Gaps = 7/217 (3%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQVVTKPQEDAS-------SVKEEL 159 VV AA VGEA+EHE ++ +FL +K KK KN E ++ ++ + DA+ S ++E Sbjct: 249 VVQAASVVGEAIEHEGRIHKFL---EKTKKRKNVEAKI-SEGESDAAIEEGEKLSKEQEK 304 Query: 160 LRQKITQLLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCM 339 LR+K+T L+KK K + VR+I+ +D ++PW KVGS L+ L+I+TA+IQPP DQ Sbjct: 305 LRKKVTTLIKKQKVQQVRRIVKGHDDSRPWGQEEHVKVGSRLIQLMIETAYIQPPIDQIG 364 Query: 340 EGPPEIRPAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPN 519 +GPP+IRPAF H KT + K +R+YGVIECD LV++GLE++ARH+VIPYMPMLV P Sbjct: 365 DGPPDIRPAFVHTLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPL 424 Query: 520 PWKGFDKGPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 W G+D+G +LFLPSYVMRIHG+K+QR+A+KR SRNQ Sbjct: 425 NWTGYDQGAHLFLPSYVMRIHGSKQQRDAVKRASRNQ 461 >ref|XP_002315996.2| DNA-directed RNA polymerase family protein [Populus trichocarpa] gi|550329816|gb|EEF02167.2| DNA-directed RNA polymerase family protein [Populus trichocarpa] Length = 862 Score = 230 bits (587), Expect = 2e-58 Identities = 119/213 (55%), Positives = 150/213 (70%), Gaps = 3/213 (1%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPK--KTKNSEIQVVTKPQEDASSVKE-ELLRQK 171 VV AA VGEA+E+E K+ +FL +KK K K K SE + V E KE E LR+K Sbjct: 123 VVQAASVVGEAIENEAKIHKFLEKTKKRKNLKEKISEGESVAAIYEGEKLTKEQEKLRKK 182 Query: 172 ITQLLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPP 351 +T L+KK K VR+I+ +D + PW KVGS L+ L+I+TA+IQPP DQ +GPP Sbjct: 183 VTTLMKKQKVHQVRRIVKGHDDSMPWGQEAHLKVGSRLIQLMIETAYIQPPIDQIGDGPP 242 Query: 352 EIRPAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKG 531 +IRPAF H KT + K +R+YGVIECD LV++GLE++ARH+VIPYMPMLV P W G Sbjct: 243 DIRPAFVHTLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTG 302 Query: 532 FDKGPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 +D+G Y FLPSYVMRIHGAK+QR A+KR SRNQ Sbjct: 303 YDQGAYFFLPSYVMRIHGAKQQRVAIKRASRNQ 335 >ref|NP_001104931.1| RNA polymerase T phage-like 1 [Zea mays] gi|4559304|gb|AAD22976.1|AF127021_1 T7-like RNA polymerase [Zea mays] Length = 975 Score = 230 bits (587), Expect = 2e-58 Identities = 110/210 (52%), Positives = 153/210 (72%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQVVTKPQEDASSVKEELLRQKITQ 180 V+ AA ++GEA+EHEV++ RFL +K +K N E++ + + +V+++ LR+K+T Sbjct: 242 VIQAACQIGEAIEHEVRINRFL---EKTRKKNNKEMENEEEAGDTNIAVEQQRLRKKVTD 298 Query: 181 LLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPPEIR 360 L+KK K + VR I+ D ++PW AKVGS L+DL I TA IQPPA Q +G P+IR Sbjct: 299 LMKKQKLRQVRNIVKNQDKSRPWGQDAHAKVGSRLIDLFIGTAHIQPPASQSSDGLPDIR 358 Query: 361 PAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKGFDK 540 PAF+H +T V E+ K +R+YGVI+CD LV+QGL+RTA+H+VIPYMPML+ P W G+DK Sbjct: 359 PAFRHEMRTMVKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDK 418 Query: 541 GPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 G +LFLPSYVMR HGA++QR+A+KR R Q Sbjct: 419 GAHLFLPSYVMRTHGARQQRDAVKRAPREQ 448 >sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2, chloroplastic/mitochondrial; AltName: Full=NsRpoT-B; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 2; Flags: Precursor gi|21425639|emb|CAC82575.2| phage-type RNA polymerase [Nicotiana sylvestris] Length = 1020 Score = 230 bits (586), Expect = 3e-58 Identities = 115/212 (54%), Positives = 152/212 (71%), Gaps = 2/212 (0%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQVVTKPQEDASSV--KEELLRQKI 174 VV AA+ +G+A+E EV++ FL +KK K K+ K +ED V ++E LR+K+ Sbjct: 289 VVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKD-------KQKEDGEHVTQEQEKLRKKV 341 Query: 175 TQLLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPPE 354 T L+KK K + V QI+ + D +KPW +AKVGS L+DLL+QTA+IQPPA+Q PP+ Sbjct: 342 TNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPD 401 Query: 355 IRPAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKGF 534 IRPAF H +T E +R+YG+I+CD LV +GLERTARH+VIPYMPMLV P W G+ Sbjct: 402 IRPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGY 461 Query: 535 DKGPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 DKG +L+LPSYVMR HGA++QREA+KR SRNQ Sbjct: 462 DKGGHLYLPSYVMRTHGARQQREAVKRASRNQ 493 >tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays] Length = 975 Score = 230 bits (586), Expect = 3e-58 Identities = 109/210 (51%), Positives = 153/210 (72%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQVVTKPQEDASSVKEELLRQKITQ 180 V+ AA ++GEA+EHEV++ RFL +K +K N E++ + + +++++ LR+K+T Sbjct: 242 VIQAACQIGEAIEHEVRINRFL---EKTRKKNNKEMENEEEAGDTNIAIEQQRLRKKVTD 298 Query: 181 LLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPPEIR 360 L+KK K + VR I+ D ++PW AKVGS L+DL I TA IQPPA Q +G P+IR Sbjct: 299 LMKKQKLRQVRNIVKNQDKSRPWGQDAHAKVGSRLIDLFIGTAHIQPPASQSSDGLPDIR 358 Query: 361 PAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKGFDK 540 PAF+H +T V E+ K +R+YGVI+CD LV+QGL+RTA+H+VIPYMPML+ P W G+DK Sbjct: 359 PAFRHEMRTMVKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDK 418 Query: 541 GPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 G +LFLPSYVMR HGA++QR+A+KR R Q Sbjct: 419 GAHLFLPSYVMRTHGARQQRDAVKRAPREQ 448 >gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao] Length = 932 Score = 229 bits (585), Expect = 4e-58 Identities = 117/213 (54%), Positives = 149/213 (69%), Gaps = 3/213 (1%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTK---NSEIQVVTKPQEDASSVKEELLRQK 171 VV AA ++GEA+EHE K+Q FL +KK K T + E + VT QE +E+L R+K Sbjct: 258 VVQAACQIGEAIEHEAKIQSFLGKTKKKKTTDKKPDGESEPVTNKQEKLVKDQEKL-RKK 316 Query: 172 ITQLLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPP 351 +TQLLKK K VR+I+ +D +K W KVG L+ LLI+ A+IQPP DQ + PP Sbjct: 317 VTQLLKKQKVHQVRKIVKGHDTSKSWGQEAHVKVGCRLIQLLIENAYIQPPVDQLGDCPP 376 Query: 352 EIRPAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKG 531 +IRPAF H KT + +K +R+YGVIECD LV++GLE+TARH+VIPYMPMLV P W G Sbjct: 377 DIRPAFVHSLKTITKDGNKGSRRYGVIECDLLVRKGLEKTARHMVIPYMPMLVPPQNWTG 436 Query: 532 FDKGPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 +D+G YLFLPSYVMR HGAK+QRE +KR R Q Sbjct: 437 YDRGAYLFLPSYVMRTHGAKQQRETVKRTPRKQ 469 >gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao] Length = 996 Score = 229 bits (585), Expect = 4e-58 Identities = 117/213 (54%), Positives = 149/213 (69%), Gaps = 3/213 (1%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTK---NSEIQVVTKPQEDASSVKEELLRQK 171 VV AA ++GEA+EHE K+Q FL +KK K T + E + VT QE +E+L R+K Sbjct: 258 VVQAACQIGEAIEHEAKIQSFLGKTKKKKTTDKKPDGESEPVTNKQEKLVKDQEKL-RKK 316 Query: 172 ITQLLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPP 351 +TQLLKK K VR+I+ +D +K W KVG L+ LLI+ A+IQPP DQ + PP Sbjct: 317 VTQLLKKQKVHQVRKIVKGHDTSKSWGQEAHVKVGCRLIQLLIENAYIQPPVDQLGDCPP 376 Query: 352 EIRPAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKG 531 +IRPAF H KT + +K +R+YGVIECD LV++GLE+TARH+VIPYMPMLV P W G Sbjct: 377 DIRPAFVHSLKTITKDGNKGSRRYGVIECDLLVRKGLEKTARHMVIPYMPMLVPPQNWTG 436 Query: 532 FDKGPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 +D+G YLFLPSYVMR HGAK+QRE +KR R Q Sbjct: 437 YDRGAYLFLPSYVMRTHGAKQQRETVKRTPRKQ 469 >sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial; AltName: Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 2B; Flags: Precursor gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast RNA polymerase [Nicotiana tabacum] Length = 1021 Score = 228 bits (582), Expect = 8e-58 Identities = 114/212 (53%), Positives = 152/212 (71%), Gaps = 2/212 (0%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQVVTKPQEDASSV--KEELLRQKI 174 VV AA+ +G+A+E EV++ FL +KK K K+ K +ED V ++E LR+K+ Sbjct: 290 VVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKD-------KQKEDGEHVTQEQEKLRKKV 342 Query: 175 TQLLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPPE 354 T L+KK K + V QI+ + D +KPW +AKVGS L++LL+QTA+IQPPA+Q PP+ Sbjct: 343 TNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPD 402 Query: 355 IRPAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKGF 534 IRPAF H +T E +R+YG+I+CD LV +GLERTARH+VIPYMPMLV P W G+ Sbjct: 403 IRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGY 462 Query: 535 DKGPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 DKG +L+LPSYVMR HGA++QREA+KR SRNQ Sbjct: 463 DKGGHLYLPSYVMRTHGARQQREAVKRASRNQ 494 >ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor] gi|241924412|gb|EER97556.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor] Length = 976 Score = 228 bits (581), Expect = 1e-57 Identities = 111/211 (52%), Positives = 151/211 (71%), Gaps = 1/211 (0%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQVVTKPQEDASSVKEEL-LRQKIT 177 V+ AA ++GEA+EHEV++ RFL +K +K N E++ + D KE+ LR+K+T Sbjct: 242 VIQAACQIGEAIEHEVRINRFL---EKTRKKSNKEMEKEEEAAGDTDIAKEQQRLRKKVT 298 Query: 178 QLLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPPEI 357 L+KK K + VR I+ D ++PW QAKVGS L++L + TA IQPPA Q +G P+I Sbjct: 299 DLMKKQKLRQVRNIVKNQDNSRPWGQDVQAKVGSRLIELFMDTAHIQPPASQSSDGLPDI 358 Query: 358 RPAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKGFD 537 RPAF+H +T E+ K +R+YGVI+CD LV+QGL+RTA+H+VIPYMPML+ P W G+D Sbjct: 359 RPAFRHEMRTVAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYD 418 Query: 538 KGPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 KG +LFLPSYVMR HGA++QREA+KR R Q Sbjct: 419 KGAHLFLPSYVMRTHGARQQREAVKRAPREQ 449 >emb|CAE52834.1| RNA polymerase [Hordeum vulgare] Length = 862 Score = 228 bits (581), Expect = 1e-57 Identities = 112/210 (53%), Positives = 154/210 (73%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQVVTKPQEDASSVKEELLRQKITQ 180 V+ AA ++GEAVEHEV++ +FL +KK K TK E+ V +P + + +++LLR+K+T Sbjct: 131 VIQAACQIGEAVEHEVRIHKFLEKTKK-KNTK--EVDKVVEPGDSDIAKEQQLLRKKVTD 187 Query: 181 LLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPPEIR 360 L+KK K + VR ++ K D T+PW AKVGS L++L I+TA IQPPA Q + PEIR Sbjct: 188 LMKKQKIRQVRHLVKKQDSTRPWGQDAHAKVGSRLIELFIETAHIQPPASQSGDSTPEIR 247 Query: 361 PAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKGFDK 540 PAF H +T R +K+R+YGVI+CD LV+QGL+RTA+H+VIPYMPML+ P W G+DK Sbjct: 248 PAFTHEMRTVA--REQKSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPINWTGYDK 305 Query: 541 GPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 G +LFLPSYVMR HGA++QREA+K+ + Q Sbjct: 306 GAHLFLPSYVMRTHGARQQREAVKKAPKEQ 335 >dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] gi|17221595|dbj|BAB78465.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] Length = 1020 Score = 227 bits (579), Expect = 2e-57 Identities = 114/212 (53%), Positives = 151/212 (71%), Gaps = 2/212 (0%) Frame = +1 Query: 1 VVLAAMKVGEAVEHEVKVQRFLANSKKPKKTKNSEIQVVTKPQEDASSV--KEELLRQKI 174 VV AA+ +G+A+E EV++ FL +KK K K+ K +ED V ++E LR+K+ Sbjct: 289 VVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKD-------KQKEDGEHVTQEQEKLRKKV 341 Query: 175 TQLLKKNKGKLVRQILNKNDPTKPWDDATQAKVGSALLDLLIQTAFIQPPADQCMEGPPE 354 T L+KK K + V QI+ + D +KPW +AKVGS L+DLL+QTA+IQPPA+Q PP+ Sbjct: 342 TNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPD 401 Query: 355 IRPAFKHVFKTSVDERSKKTRKYGVIECDALVKQGLERTARHVVIPYMPMLVRPNPWKGF 534 I PAF H +T E +R+YG+I+CD LV +GLERTARH+VIPYMPMLV P W G+ Sbjct: 402 IPPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGY 461 Query: 535 DKGPYLFLPSYVMRIHGAKKQREALKRVSRNQ 630 DKG +L+LPSYVMR HGA++QREA+KR SRNQ Sbjct: 462 DKGGHLYLPSYVMRTHGARQQREAVKRASRNQ 493