BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00008163
         (1922 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001775586.1| predicted protein [Physcomitrella patens] gi...   252   2e-81
emb|CBI22720.3| unnamed protein product [Vitis vinifera]              261   1e-78
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   250   3e-75
ref|XP_006859054.1| hypothetical protein AMTR_s00068p00192690 [A...   226   1e-73
gb|EOY23205.1| RNA polymerase III subunit RPC82 family protein, ...   244   5e-70
ref|XP_002985756.1| hypothetical protein SELMODRAFT_424745 [Sela...   195   9e-65
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr...   225   1e-63
gb|EMJ20202.1| hypothetical protein PRUPE_ppa004195mg [Prunus pe...   221   3e-63
gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Mor...   249   4e-63
ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protei...   219   3e-60
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s...   213   5e-60
ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polyp...   214   5e-60
ref|XP_002974451.1| hypothetical protein SELMODRAFT_414649 [Sela...   193   2e-59
ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III s...   212   6e-59
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              215   1e-58
ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III s...   210   2e-58
ref|XP_004489521.1| PREDICTED: DNA-directed RNA polymerase III s...   197   4e-58
ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III s...   204   1e-57
ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III s...   225   2e-57
ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citr...   225   2e-57

>ref|XP_001775586.1| predicted protein [Physcomitrella patens] gi|162673004|gb|EDQ59533.1|
            predicted protein [Physcomitrella patens]
          Length = 520

 Score =  252 bits (643), Expect(3) = 2e-81
 Identities = 146/371 (39%), Positives = 208/371 (56%), Gaps = 13/371 (3%)
 Frame = +2

Query: 122  KVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGFKISSDD-GSATGKAPT 298
            KV  CLVY+G L L ++A+F+ELNPS LK+ LLVL+QH+CVQ +K+  +  GSA  +  T
Sbjct: 3    KVVKCLVYRGPLALADIARFSELNPSTLKSSLLVLVQHSCVQAYKVEHEGVGSAPPRVST 62

Query: 299  QYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXXXHGRLSFDQLKERAKAQSAERK 478
             Y    D +LHRMRFPKFL  VR                HGRL+ +Q+ +R  A++ ++ 
Sbjct: 63   SYVPLCDNILHRMRFPKFLLAVREDLGEEVGSLVEGLLEHGRLTLEQITQRTAAKAGKKV 122

Query: 479  DGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPR-SSVDPKKKVPRGATRR----IKLDV 643
                  G++E+F KLV A F+ERCP AEP + P+ S+V+P KKVPRGA +     +    
Sbjct: 123  ----VKGVKETFAKLVAARFIERCPAAEPSLQPKDSNVEPPKKVPRGAAKARGPILSAQD 178

Query: 644  NFETEEQRIAAAASLPDVERFNFYLPKRNDHHTGAFGKKRKYVTLEEDSRTGMPS----- 808
                  QRI  AA+  + +RF   +           G     V  E    + +P      
Sbjct: 179  TVSEVVQRILKAAAPDETDRFRLPISMA--------GMSAPIVDNETTDPSSLPQKVNDI 230

Query: 809  --DDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATRSIATTGKQDTS 982
              D+ E LWRVN+ +F+ + R + CV   R+RLD  A  +L  M  AT +  T+ +Q  S
Sbjct: 231  LIDEKEVLWRVNFEQFLRKLRHQTCVDMVRTRLDAGAAIILSAMLQATGNQETSARQHHS 290

Query: 983  APLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFLSRTGDHSGNYIINIRRIIQ 1162
             PLS + IT AVRS+ +G  MT++RIR  + Q+ S  VGFL++ G+   +Y IN+  II+
Sbjct: 291  VPLSMDAITQAVRSTPDGQHMTLERIRGLVAQLASDGVGFLAKAGEGGNSYAINMHNIIE 350

Query: 1163 VTQTSEVEAIV 1195
              Q +EVE IV
Sbjct: 351  ARQRNEVEGIV 361



 Score = 60.8 bits (146), Expect(3) = 2e-81
 Identities = 28/67 (41%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1246 QSKIAGKALLDARQSLGVLYRLLKDGYLQLQ-EIARTNDHAPAKTFYLWRVNESALKAQI 1422
            + K  G+  +  +    +LYRLLK+ Y+Q+Q EIA+T++H  +K+ YLW+VN  A+  ++
Sbjct: 383  EQKQIGERAMAPKNVKELLYRLLKEQYVQVQQEIAKTSEHIASKSIYLWKVNYRAVLYRV 442

Query: 1423 VDDMYHA 1443
            +DD+YHA
Sbjct: 443  LDDLYHA 449



 Score = 40.8 bits (94), Expect(3) = 2e-81
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +3

Query: 1548 PIITLSNRQREQAERIRKIATILETSLLKLDDSILLFDCF 1667
            P+   +  Q++Q +RI +I  IL+ SLLKLDD+ILLF  F
Sbjct: 481  PLSQAAPAQQDQVKRISRITKILDASLLKLDDAILLFHDF 520


>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  261 bits (667), Expect(3) = 1e-78
 Identities = 165/388 (42%), Positives = 224/388 (57%), Gaps = 8/388 (2%)
 Frame = +2

Query: 53   MVSRSAQKLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 232
            M ++   +LA  LI SHFG+LV KVC+CL+ KG LTL  + +FTEL P Q+K+C+LVLIQ
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 233  HNCVQGFKISSDDGSATGKAP---TQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXX 403
            HNCVQ F I  + G   G+AP   TQY      +LHRMRF KFL+ V             
Sbjct: 61   HNCVQAFAIQQEVG--FGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILE 118

Query: 404  XXXXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI-PPR 580
                HGRL+ +Q+ +RAK+  +E +   ++A L ESF KLV AHFVERCP +EP + PP 
Sbjct: 119  GLLQHGRLTLEQILDRAKSNQSEGEPVVQDA-LRESFLKLVRAHFVERCPASEPFLAPPS 177

Query: 581  SSVDPKKKVPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---PKRNDHHTGAF 751
                P +K  RGA +  KL    +T EQR  AAA+  D +RF+  +      +D      
Sbjct: 178  EEETPARK--RGA-KSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVDDSPNVTA 234

Query: 752  GKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDR 931
            G+KRK   LE D  TG  S + + LWR N+ EFV   R KAC+A  ++RLD  A  VL  
Sbjct: 235  GEKRKQDALELDKETG-ASCEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSA 293

Query: 932  MFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLS 1108
            M  ATRS     K + S PLS + I   V  S+ G  MT++R+R SL+Q+ C+P V   +
Sbjct: 294  MLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAA 353

Query: 1109 RTGDHSGNYIINIRRIIQVTQTSEVEAI 1192
                   +Y ++++ II++ Q  EVE+I
Sbjct: 354  E------SYSVDLKNIIELAQNDEVESI 375



 Score = 42.7 bits (99), Expect(3) = 1e-78
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 1252 KIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKT-FYLWRVNESALKAQIVD 1428
            KI+    ++ + +  +LY+L KD YLQ++++   N H   ++ F LW+V +  L   +++
Sbjct: 402  KISDTTFVEKKDTAKILYQLWKDEYLQMEKL---NLHGSRQSQFLLWKVTKDTLWGHVLN 458

Query: 1429 DMYHA 1443
            +MYH+
Sbjct: 459  EMYHS 463



 Score = 40.0 bits (92), Expect(3) = 1e-78
 Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 5/47 (10%)
 Frame = +3

Query: 1542 KQPIITLSNRQREQA-----ERIRKIATILETSLLKLDDSILLFDCF 1667
            +Q II L   +R  A     ER+RK+  +LE+SL+KLDD+I+LF+ F
Sbjct: 478  EQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 524


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
            vinifera]
          Length = 511

 Score =  250 bits (638), Expect(3) = 3e-75
 Identities = 160/382 (41%), Positives = 216/382 (56%), Gaps = 2/382 (0%)
 Frame = +2

Query: 53   MVSRSAQKLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 232
            M ++   +LA  LI SHFG+LV KVC+CL+ KG LTL  + +FTEL P Q+K+C+LVLIQ
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 233  HNCVQGFKISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXX 412
            HNCVQ F I  +      +  TQY      +LHRMRF KFL+ V                
Sbjct: 61   HNCVQAFAIQQE----APRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLL 116

Query: 413  XHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI-PPRSSV 589
             HGRL+ +Q+ +RAK  S +R+   ++A L ESF KLV AHFVERCP +EP + PP    
Sbjct: 117  QHGRLTLEQILDRAK--SNQREPVVQDA-LRESFLKLVRAHFVERCPASEPFLAPPSEEE 173

Query: 590  DPKKKVPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRNDHHTGAFGKKRKY 769
             P +K  RGA +  KL    +T EQR  AAA+  D +RF+  +    D         RK 
Sbjct: 174  TPARK--RGA-KSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVDD---SPNRKQ 227

Query: 770  VTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATR 949
              LE D  TG  S + + LWR N+ EFV   R KAC+A  ++RLD  A  VL  M  ATR
Sbjct: 228  DALELDKETG-ASCEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAMLEATR 286

Query: 950  SIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLSRTGDHS 1126
            S     K + S PLS + I   V  S+ G  MT++R+R SL+Q+ C+P V   +      
Sbjct: 287  SEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAAE----- 341

Query: 1127 GNYIINIRRIIQVTQTSEVEAI 1192
             +Y ++++ II++ Q  EVE+I
Sbjct: 342  -SYSVDLKNIIELAQNDEVESI 362



 Score = 42.7 bits (99), Expect(3) = 3e-75
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 1252 KIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKT-FYLWRVNESALKAQIVD 1428
            KI+    ++ + +  +LY+L KD YLQ++++   N H   ++ F LW+V +  L   +++
Sbjct: 389  KISDTTFVEKKDTAKILYQLWKDEYLQMEKL---NLHGSRQSQFLLWKVTKDTLWGHVLN 445

Query: 1429 DMYHA 1443
            +MYH+
Sbjct: 446  EMYHS 450



 Score = 40.0 bits (92), Expect(3) = 3e-75
 Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 5/47 (10%)
 Frame = +3

Query: 1542 KQPIITLSNRQREQA-----ERIRKIATILETSLLKLDDSILLFDCF 1667
            +Q II L   +R  A     ER+RK+  +LE+SL+KLDD+I+LF+ F
Sbjct: 465  EQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 511


>ref|XP_006859054.1| hypothetical protein AMTR_s00068p00192690 [Amborella trichopoda]
            gi|548863166|gb|ERN20521.1| hypothetical protein
            AMTR_s00068p00192690 [Amborella trichopoda]
          Length = 515

 Score =  226 bits (577), Expect(3) = 1e-73
 Identities = 147/392 (37%), Positives = 203/392 (51%), Gaps = 11/392 (2%)
 Frame = +2

Query: 53   MVSRSAQKLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 232
            MV+  A++LA +LI S FGDLV KVC CL+ KG L L  LA  TEL   QLK CLLVLIQ
Sbjct: 1    MVANQARQLAVDLITSDFGDLVAKVCKCLLKKGALPLARLAMETELPREQLKKCLLVLIQ 60

Query: 233  HNCVQGFKISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXX 412
            HNCVQ F+   + G     + T+Y   LD ++HR+RFPKFL  +R               
Sbjct: 61   HNCVQAFQTKKEVGGRV-MSTTEYTALLDDIIHRLRFPKFLILIRDQFDEQCECLLGILL 119

Query: 413  XHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEP--VIPPRSS 586
             HGR +F+QL +R      E   G     +   F KLV A +VERCP +EP  V+     
Sbjct: 120  SHGRSTFEQLMQRLFENQPE-VSGDITDQMRTRFAKLVQARYVERCPASEPQLVLDSEEG 178

Query: 587  VDPKKKVPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRNDHHTGA------ 748
               KKK+               T+E+R   AA+  + ERF+F     ND  T +      
Sbjct: 179  TITKKKLK-----------EIVTDEERAVMAAAPLEAERFSFPTYSDNDASTESEIMADQ 227

Query: 749  ---FGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGT 919
                G+KRK   +E D  + + + + + LWR N+ EFV   R KAC+A  R RLD+ A  
Sbjct: 228  SILVGEKRKRGVMEMDDDSIVLACEKDVLWRANFEEFVCSLRHKACIANVRPRLDIGAAV 287

Query: 920  VLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVG 1099
            VL+ +   TR+     K + SAP S   I  A+  S  G    ++ +R +L Q+ +    
Sbjct: 288  VLEAILKETRAKEKQNKAEYSAPFSMNSIVQALLGSPHG---HLEHVRAALNQLGA---- 340

Query: 1100 FLSRTGDHSGNYIINIRRIIQVTQTSEVEAIV 1195
              S TG   G+Y I++++II+  Q SE+E+IV
Sbjct: 341  --SCTGATEGSYRISLKKIIEAAQNSEMESIV 370



 Score = 60.1 bits (144), Expect(3) = 1e-73
 Identities = 30/66 (45%), Positives = 47/66 (71%)
 Frame = +1

Query: 1246 QSKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIV 1425
            Q +I   AL++ +++  +LY+L+KD YLQ++E+A     A  K F LWRVN S+L+ +I+
Sbjct: 394  QKQIPNLALIETKKAFELLYKLMKDDYLQMEEVA----SAQGKLF-LWRVNRSSLQEKIL 448

Query: 1426 DDMYHA 1443
            +DMYHA
Sbjct: 449  NDMYHA 454



 Score = 40.4 bits (93), Expect(3) = 1e-73
 Identities = 18/36 (50%), Positives = 27/36 (75%)
 Frame = +3

Query: 1560 LSNRQREQAERIRKIATILETSLLKLDDSILLFDCF 1667
            ++  Q ++ +RIRK+  ILE S+L+LDDSI+LF  F
Sbjct: 480  ITELQEKKVDRIRKVKPILEASILRLDDSIMLFHNF 515


>gb|EOY23205.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
            [Theobroma cacao]
          Length = 523

 Score =  244 bits (622), Expect(2) = 5e-70
 Identities = 156/394 (39%), Positives = 213/394 (54%), Gaps = 13/394 (3%)
 Frame = +2

Query: 53   MVSRSAQKLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 232
            MV++   K A  LI +HFGDLV KVC CL+ KG LTL  + +FTEL  SQ+KN LLVLIQ
Sbjct: 1    MVTQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60

Query: 233  HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 409
            HNCVQ F +        G K  +QY    + ++HR RFPKFL+ V               
Sbjct: 61   HNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEAL 120

Query: 410  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 583
              HGRL+  Q+ +RAK+   E  D   +A + E+F KL++AHFVERCP AEPV+  P   
Sbjct: 121  LLHGRLTLKQMSDRAKSAQNEGDDVILDA-VREAFIKLLNAHFVERCPAAEPVLTKPTEE 179

Query: 584  SVDPKKKVPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 736
                +K+VP+ A    K+    ET EQR+  AA+  +  RF                N+ 
Sbjct: 180  ETSARKRVPKSA----KILEGKETLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNS 235

Query: 737  HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 916
             +   GKKRK   LE ++  G  +D+   LWR N+ EF+ R R KA +   R+ LD  A 
Sbjct: 236  SSMTVGKKRKLDALESETE-GEATDEQVVLWRANFEEFIRRLRHKAFIENVRACLDDGAV 294

Query: 917  TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQ 1093
             V+  M  ATR+     K + S PLS   I   V  S+EG  +T DR+R SL+Q+ C P 
Sbjct: 295  IVISAMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSCPPF 354

Query: 1094 VGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIV 1195
            V  ++       +Y I+ ++II++ Q  EVE+IV
Sbjct: 355  VKAVNE------SYSIDFKKIIELAQNDEVESIV 382



 Score = 50.1 bits (118), Expect(2) = 5e-70
 Identities = 23/64 (35%), Positives = 40/64 (62%)
 Frame = +1

Query: 1252 KIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDD 1431
            KIA  A ++ + +  +LY+L KD YL ++++  T   A    F LW+VN++ L   ++D+
Sbjct: 408  KIADTAFVEKKDTTKILYKLWKDDYLHMEKLQLTG--ARQSQFLLWKVNKNTLWEHVLDE 465

Query: 1432 MYHA 1443
            M+HA
Sbjct: 466  MFHA 469


>ref|XP_002985756.1| hypothetical protein SELMODRAFT_424745 [Selaginella moellendorffii]
            gi|300146665|gb|EFJ13334.1| hypothetical protein
            SELMODRAFT_424745 [Selaginella moellendorffii]
          Length = 521

 Score =  195 bits (496), Expect(3) = 9e-65
 Identities = 137/390 (35%), Positives = 206/390 (52%), Gaps = 8/390 (2%)
 Frame = +2

Query: 53   MVSRSAQKLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 232
            M +  A KLAC LI+  FGDLV  VC CL+ +G L+LPE+  FT L   QL +CLLVLIQ
Sbjct: 1    MAAGYAGKLACFLIKDQFGDLVHSVCECLISRGQLSLPEIGSFTLLARPQLASCLLVLIQ 60

Query: 233  HNCVQGFKISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVR-XXXXXXXXXXXXXX 409
            HNCVQ FK+  +D     +A  +Y   +D ++ R  FP F+  +R               
Sbjct: 61   HNCVQAFKVLDEDNL---EARLRYTAIVDHIVLRACFPLFVELIREKTGNDQSEELALGL 117

Query: 410  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 589
              HGRL+ +QL +R  A+ +  +D   ++   E+F  L+    VERCP  E V+    + 
Sbjct: 118  LQHGRLTLEQLIKR-DAECSNSEDA--QSQFMEAFTNLLQHKLVERCPRPEAVLGFSDNA 174

Query: 590  D---PKKKVPRGATRRIKLDVNFETEEQRIAAAASLPDVERF----NFYLPKRNDHHTGA 748
                P KK  RG++++  L +NFET+ +R+ AAA+  + ERF     + + +     T +
Sbjct: 175  GDGRPAKKA-RGSSKKRSLPLNFETQVRRVLAAAAPMEAERFRGPSRWIMDEDAAASTPS 233

Query: 749  FGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLD 928
             G+KRK+  L + S      D+ E LWRVN+ E V   R KAC           A TV++
Sbjct: 234  TGEKRKHGALWDSS----SMDEKEVLWRVNFEECVKLLRHKACACHVNFSFGSDAKTVVE 289

Query: 929  RMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFLS 1108
             M  ATR   TT K   S  L+  +I   +RS       T   +R +L +M   + GF++
Sbjct: 290  AMLEATRKTETTVKAAFSDALTLNDIL-ILRSD-----WTAPVVRNALKRMV--EEGFIN 341

Query: 1109 RTGDHSGNYIINIRRIIQVTQTSEVEAIVS 1198
              GD   +Y + +++I+++ + +EVE+IVS
Sbjct: 342  SVGDAGSHYTVAMQKIVELARKTEVESIVS 371



 Score = 65.5 bits (158), Expect(3) = 9e-65
 Identities = 29/67 (43%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1246 QSKIAGKALLDARQSLGVLYRLLKDGYLQLQEIART-NDHAPAKTFYLWRVNESALKAQI 1422
            Q  I+ K L+  +++  +LY+L+K+ Y++LQE+ ++  D APA+TFYLW V+ S L + +
Sbjct: 393  QKAISEKCLIPDKEAWQLLYQLMKERYIELQEVPKSAGDRAPARTFYLWHVDFSKLSSVV 452

Query: 1423 VDDMYHA 1443
            ++DMYHA
Sbjct: 453  LEDMYHA 459



 Score = 36.6 bits (83), Expect(3) = 9e-65
 Identities = 15/37 (40%), Positives = 28/37 (75%)
 Frame = +3

Query: 1557 TLSNRQREQAERIRKIATILETSLLKLDDSILLFDCF 1667
            +LSN Q+++ +R++ I  ILE S+ KL ++I+L+D +
Sbjct: 485  SLSNEQQQKLDRLQSIVKILEVSIFKLMNTIMLYDFY 521


>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
            gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC3-like isoform X1 [Citrus
            sinensis] gi|557523806|gb|ESR35173.1| hypothetical
            protein CICLE_v10004721mg [Citrus clementina]
          Length = 527

 Score =  225 bits (574), Expect(2) = 1e-63
 Identities = 147/391 (37%), Positives = 208/391 (53%), Gaps = 9/391 (2%)
 Frame = +2

Query: 53   MVSRSAQKLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 232
            M++    K A  +I +HFGDLV KVC CL+ KG LT   + ++TEL+  Q+KN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 233  HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 409
             NCVQ F     DG A G KA TQY +  D +LHR+RF KFL+ +               
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 410  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 589
              HGRL+  Q+ +RAK+ S +  +  +   L E+  KLV AH+VERCP +EP++ P S  
Sbjct: 121  LEHGRLTLKQMFDRAKS-SEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEE 179

Query: 590  D-PKKKVPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL-------PKRNDHHTG 745
            + P +K    + ++I      ET EQ++  AA   +  RF+           K  + +  
Sbjct: 180  EGPARKKGSKSAKKIG---EPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNV 236

Query: 746  AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVL 925
              G+KRK+  LE D   G+ +D+   ++R N+  F+ R R K C+   R+ LD  A  VL
Sbjct: 237  TPGEKRKHDVLELD-ECGV-ADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294

Query: 926  DRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFL 1105
              M  AT S     K   S PLS   I   V  S+ G  MT+D +R SL+Q+     G L
Sbjct: 295  SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQL-----GEL 349

Query: 1106 SRTGDHSGNYIINIRRIIQVTQTSEVEAIVS 1198
            S     S +Y I+  +II++ Q  EVE++VS
Sbjct: 350  SFVDASSDSYSIDFEKIIEIAQNEEVESVVS 380



 Score = 47.4 bits (111), Expect(2) = 1e-63
 Identities = 22/64 (34%), Positives = 38/64 (59%)
 Frame = +1

Query: 1252 KIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDD 1431
            KI+    ++ + +  +LY+L KDGYL ++++  T   A    F LW+VN   L   ++D+
Sbjct: 405  KISDTTFVEKKDAPKILYKLWKDGYLLMEKLVVTG--ARQSQFLLWKVNRQILWKHVLDE 462

Query: 1432 MYHA 1443
            M+HA
Sbjct: 463  MFHA 466


>gb|EMJ20202.1| hypothetical protein PRUPE_ppa004195mg [Prunus persica]
          Length = 524

 Score =  221 bits (564), Expect(3) = 3e-63
 Identities = 145/380 (38%), Positives = 202/380 (53%), Gaps = 6/380 (1%)
 Frame = +2

Query: 74   KLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGF 253
            K A  +I S+FG+LV KVC  L+ +G L+L +L  FTEL P Q+KN LL+LIQHNCVQ F
Sbjct: 9    KYAVHIITSNFGNLVAKVCEILLRRGHLSLKQLIGFTELTPQQVKNSLLILIQHNCVQPF 68

Query: 254  KISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXXXHGRLSF 433
                 +G       TQY    D ++HR RF KFL+ V                 +GRL+ 
Sbjct: 69   SFDQSEGPKV----TQYIALFDNIIHRGRFAKFLAVVSQELDTDRELILKDLLENGRLTL 124

Query: 434  DQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSVD-PKKKVP 610
             Q+ E A++ S  + D  ++  ++ESF KLV+AHFVERCP  EPV+   +  + P KK  
Sbjct: 125  KQIIEGAES-SKSQGDSADKDSVQESFLKLVNAHFVERCPAPEPVLGQATKQEGPAKK-- 181

Query: 611  RGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRNDHHTGAFGKKRKYVTLEEDS 790
            RGA     ++V  ET EQR+ AAA+ P+  RF+  +    D    A G K   +++ E  
Sbjct: 182  RGAKSAKMVEVP-ETIEQRVIAAAAPPEAIRFSIMI----DSEADAPGGKSDNMSVGEKV 236

Query: 791  RTGM-----PSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATRSI 955
              G+        D   LWR N+ EF+   R KACV   R+RLD  A  VL  M  ATR+ 
Sbjct: 237  GIGIVISIYQGYDEVVLWRANFEEFIRCLRHKACVENVRARLDDEAAVVLRAMLKATRTA 296

Query: 956  ATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFLSRTGDHSGNY 1135
                K + S PLS   I   V +S+ G  +T+ R+R SL  +C        R  D   +Y
Sbjct: 297  EKKVKTENSVPLSLNTIYEEVINSEAGRSLTMGRVRDSLSGLCDSS---QERDVDEDESY 353

Query: 1136 IINIRRIIQVTQTSEVEAIV 1195
              ++++I+++ Q  EVE IV
Sbjct: 354  SADLKKILELAQDDEVELIV 373



 Score = 39.3 bits (90), Expect(3) = 3e-63
 Identities = 18/64 (28%), Positives = 37/64 (57%)
 Frame = +1

Query: 1249 SKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVD 1428
            S ++  +L++  ++  +LY L KD YL ++ +  T   A    F +WRV++  +   ++D
Sbjct: 401  SDMSQLSLVEKNETPKILYNLWKDDYLHMERLVVTG--ARQSQFLVWRVDKPIIWKHVLD 458

Query: 1429 DMYH 1440
            +M+H
Sbjct: 459  EMFH 462



 Score = 31.6 bits (70), Expect(3) = 3e-63
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 1548 PIITLSNRQREQAERIRKIATILETSLLKLDDSILLFDCF 1667
            P   L     +Q +  R +  +L+ SLLKLDD+++LF  F
Sbjct: 485  PAHKLLGEMAKQWQLYRNVILVLQASLLKLDDALMLFHDF 524


>gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
          Length = 564

 Score =  249 bits (635), Expect = 4e-63
 Identities = 157/385 (40%), Positives = 207/385 (53%), Gaps = 11/385 (2%)
 Frame = +2

Query: 74   KLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGF 253
            K A  LI SHFG+LV  VC  L+ KG LTL +L +FTEL P Q+KN LL+LIQHNCVQ F
Sbjct: 8    KFAVHLITSHFGNLVANVCENLLRKGPLTLQQLIRFTELTPLQIKNSLLILIQHNCVQPF 67

Query: 254  KISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXXXHGRLSF 433
                          TQY +  D +LHR+RFPKFL  V                 HGRL+ 
Sbjct: 68   SSEQIGAGGNEVKVTQYLVLFDNILHRLRFPKFLEIVSEELDKNCGEILEGLLQHGRLTL 127

Query: 434  DQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSVDPKKKVPR 613
            +Q+ ERA       +D   +  + ESF+KL+++ FVERCP  EP + P +     K   R
Sbjct: 128  EQIYERA-------RDNAVQDAVRESFQKLLNSRFVERCPAPEPFVEPSTIKSSNK---R 177

Query: 614  GATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLP---------KRNDHHTG-AFGKKR 763
            GA +  KLD   ETEEQR+ AAA+  D  RF+   P         K  D  +    G+KR
Sbjct: 178  GA-KSAKLDEVSETEEQRVLAAAASLDTLRFSILTPSGTEFDEDKKDGDSSSSMGVGEKR 236

Query: 764  KYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCA 943
            K+   + D   G   +++  LWR N+ EF    R KAC+   R+RLDV A TVL  M  A
Sbjct: 237  KHGAADSDDAFGSNENEV-ILWRANFEEFTRYLRHKACIENVRARLDVGAATVLKAMLDA 295

Query: 944  TRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLSRTGD 1120
            TRS     K + S  LS + I   V  S+ G  +T+DR+R SL+Q+ CS      S T D
Sbjct: 296  TRSAEKKVKTENSVSLSMDTIFEEVMKSEAGRSLTLDRVRASLVQLGCSS-----SGTDD 350

Query: 1121 HSGNYIINIRRIIQVTQTSEVEAIV 1195
                Y I++++II++ Q  EVE+IV
Sbjct: 351  ---TYSIDLKQIIELAQKEEVESIV 372


>ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protein [Populus trichocarpa]
            gi|550322612|gb|EEF06047.2| RNA polymerase 3 subunit
            RPC82 family protein [Populus trichocarpa]
          Length = 520

 Score =  219 bits (559), Expect(2) = 3e-60
 Identities = 147/385 (38%), Positives = 208/385 (54%), Gaps = 9/385 (2%)
 Frame = +2

Query: 53   MVSRSAQKLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 232
            MVS+   K A  +I +HFG LV KVC+CL+ KG L L E+ ++TEL+ + ++NCLLVLIQ
Sbjct: 1    MVSQYGIKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQ 60

Query: 233  HNCVQGFKISSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 409
            HNC+Q F +  + G     K  + Y +  D VLHR+RF KF++ V               
Sbjct: 61   HNCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETL 120

Query: 410  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 589
              HGRLS +Q+ +  + +S+    G  EA L+E+  KLV A +VERCP++EP +   S  
Sbjct: 121  LQHGRLSSEQIFDGFRDRSS---SGGMEA-LQENMHKLVMARYVERCPISEPFLALPSEE 176

Query: 590  DPKKKVPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL--------PKRNDHHTG 745
            +      RGA +  K  +  ET EQR+  AA  P+  RF+F L         K  ++ + 
Sbjct: 177  EAAPVRRRGA-KSAKAFLEPETLEQRVLVAAVPPEGMRFSFELNPEIGADRDKVENNSSS 235

Query: 746  AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVL 925
              G KRK   LE D   G+ +D   ALWRVN+ EF+ R R K C+   R+RLD  A TV 
Sbjct: 236  NIGDKRKLDALESDIDGGV-ADKQVALWRVNFEEFIRRLRHKICIETVRTRLDDEAATVF 294

Query: 926  DRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFL 1105
              M  A+RS     K  +S PLS+  I   V  S++G  MT+D + + L+ + S      
Sbjct: 295  TAMLDASRSEEKKIKTASSVPLSENSIYAEVIKSEKGRNMTLDYVISVLVGLSSSPP--F 352

Query: 1106 SRTGDHSGNYIINIRRIIQVTQTSE 1180
             R  D+S  Y I+ +  I+V QT E
Sbjct: 353  VRVVDNS--YSIDFKHTIEVAQTDE 375



 Score = 41.6 bits (96), Expect(2) = 3e-60
 Identities = 19/64 (29%), Positives = 38/64 (59%)
 Frame = +1

Query: 1252 KIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDD 1431
            KI+    L+ +++  +L ++ +  YLQ++++      A    F LW+VN   L+ +++DD
Sbjct: 404  KISDSIFLEKKETANILSKMWQGDYLQMEKLI-----AGPTQFLLWKVNMINLRERVLDD 458

Query: 1432 MYHA 1443
            M+HA
Sbjct: 459  MFHA 462


>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X2 [Citrus sinensis]
          Length = 512

 Score =  213 bits (542), Expect(2) = 5e-60
 Identities = 141/391 (36%), Positives = 201/391 (51%), Gaps = 9/391 (2%)
 Frame = +2

Query: 53   MVSRSAQKLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 232
            M++    K A  +I +HFGDLV KVC CL+ KG LT   + ++TEL+  Q+KN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 233  HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 409
             NCVQ F     DG A G KA TQY +  D +LHR+RF KFL+ +               
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 410  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 589
              HGRL+  Q+ +RAK+ S +  +  +   L E+  KLV AH+VERCP +EP++ P S  
Sbjct: 121  LEHGRLTLKQMFDRAKS-SEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEE 179

Query: 590  D-PKKKVPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL-------PKRNDHHTG 745
            + P +K    + ++I      ET EQ++  AA   +  RF+           K  + +  
Sbjct: 180  EGPARKKGSKSAKKIG---EPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNV 236

Query: 746  AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVL 925
              G+KRK+  LE D   G+ +D+   ++R N+  F+ R R K C+   R+ LD  A  VL
Sbjct: 237  TPGEKRKHDVLELD-ECGV-ADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294

Query: 926  DRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFL 1105
              M  AT S     K   S PLS   I   V  S+ G  MT+D +R SL+Q         
Sbjct: 295  SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQ--------- 345

Query: 1106 SRTGDHSGNYIINIRRIIQVTQTSEVEAIVS 1198
                       ++  +II++ Q  EVE++VS
Sbjct: 346  -----------LDFEKIIEIAQNEEVESVVS 365



 Score = 47.4 bits (111), Expect(2) = 5e-60
 Identities = 22/64 (34%), Positives = 38/64 (59%)
 Frame = +1

Query: 1252 KIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDD 1431
            KI+    ++ + +  +LY+L KDGYL ++++  T   A    F LW+VN   L   ++D+
Sbjct: 390  KISDTTFVEKKDAPKILYKLWKDGYLLMEKLVVTG--ARQSQFLLWKVNRQILWKHVLDE 447

Query: 1432 MYHA 1443
            M+HA
Sbjct: 448  MFHA 451


>ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polypeptide, putative [Ricinus
            communis] gi|223549895|gb|EEF51382.1| DNA-directed RNA
            polymerase III 62 kDa polypeptide, putative [Ricinus
            communis]
          Length = 485

 Score =  214 bits (545), Expect(2) = 5e-60
 Identities = 136/376 (36%), Positives = 201/376 (53%), Gaps = 2/376 (0%)
 Frame = +2

Query: 74   KLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGF 253
            K A  +I +HFG+LV KVC CL+ KG LT+ ++ +FTELN +Q+KN LLVLIQHNCVQ +
Sbjct: 9    KYATHIITNHFGNLVAKVCQCLLRKGPLTVQKVVEFTELNQTQVKNSLLVLIQHNCVQAY 68

Query: 254  KISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXXXHGRLSF 433
            + S DD   T    T Y    D +LHR+RF KFL+ +                 HGRL+ 
Sbjct: 69   R-SGDDLKLT----THYIALFDNILHRVRFSKFLAIISQDFHKSCVDIVEGLLEHGRLTV 123

Query: 434  DQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSVDPKKKVPR 613
             Q+ +RA ++++   D      ++E+  KLV+  ++E CP +EPV+ P +  + + K  +
Sbjct: 124  KQIVDRANSRNSIGLD-----SVKENLCKLVNGRYIEHCPASEPVLAPPTEEEDRAK--K 176

Query: 614  GATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPK--RNDHHTGAFGKKRKYVTLEED 787
             + +  K+ +  ET EQR+ A A   D +RF+  L    ++D          K+V     
Sbjct: 177  RSAKSAKIVIESETLEQRVLAVAVPMDAKRFSVDLDTELKDDAENDQNKSSDKHV----- 231

Query: 788  SRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATRSIATTG 967
                  ++D   LWR N+ EF+ R R KAC+   R RLD  A  VL  M  A+R+     
Sbjct: 232  --GDKVAEDQVVLWRANFEEFIRRLRHKACIENVRGRLDDGAAIVLSAMLDASRTEEKKV 289

Query: 968  KQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFLSRTGDHSGNYIINI 1147
            K  +S PLS   I   V  ++ G  MT+D I ++L Q+ SP   F+    D    Y I+ 
Sbjct: 290  KTASSVPLSLNSIYEEVIKNENGRNMTIDHIESALGQLGSPP-PFVKAVED---LYTIDF 345

Query: 1148 RRIIQVTQTSEVEAIV 1195
            + II+  Q+ EVE+IV
Sbjct: 346  KHIIEAAQSDEVESIV 361



 Score = 46.2 bits (108), Expect(2) = 5e-60
 Identities = 20/64 (31%), Positives = 40/64 (62%)
 Frame = +1

Query: 1252 KIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDD 1431
            KI+    ++ +++  +LY++ +D YL ++++      A   TF LW+VN+  L  Q++D+
Sbjct: 387  KISDTIFVEKKETTKILYKMWQDDYLLMEKLV-----AGTATFLLWKVNKHTLWKQVLDE 441

Query: 1432 MYHA 1443
            M+HA
Sbjct: 442  MFHA 445


>ref|XP_002974451.1| hypothetical protein SELMODRAFT_414649 [Selaginella moellendorffii]
            gi|300158049|gb|EFJ24673.1| hypothetical protein
            SELMODRAFT_414649 [Selaginella moellendorffii]
          Length = 504

 Score =  193 bits (490), Expect(2) = 2e-59
 Identities = 137/390 (35%), Positives = 205/390 (52%), Gaps = 8/390 (2%)
 Frame = +2

Query: 53   MVSRSAQKLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 232
            M +  A KLAC LI+  FGDLV  VC CL+ +G L+LPE+  FT L    L +CLLVLIQ
Sbjct: 1    MAAGYAGKLACFLIKDQFGDLVHSVCECLISRGQLSLPEIGSFTLLARPHLASCLLVLIQ 60

Query: 233  HNCVQGFKISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVR-XXXXXXXXXXXXXX 409
            HNCVQ FK+  +D     +A  +Y   +D V+ R  FP FL  +R               
Sbjct: 61   HNCVQAFKVLDEDNL---EARLRYTAIVDHVVLRACFPLFLELIREKTGNDQSEELALGL 117

Query: 410  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 589
              HGRL+ +QL +R  A+ +  +D   ++   E+F  L+    VERCP  E V+    + 
Sbjct: 118  LQHGRLTLEQLIKR-DAECSNSEDA--QSQFMEAFTNLLQHKLVERCPRPEAVLGFSDNA 174

Query: 590  D---PKKKVPRGATRRIKLDVNFETEEQRIAAAASLPDVERF----NFYLPKRNDHHTGA 748
                P KK  RG++++  L +NFET+ +R+ AAA+  + ERF     + + +     T +
Sbjct: 175  GDGRPAKKA-RGSSKKRSLPLNFETQVRRVLAAAAPMEAERFRGPSRWIMDEDAAASTPS 233

Query: 749  FGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLD 928
              +KRK+  L + S      D+ E LWRVN+ E V   R KAC +         A TV++
Sbjct: 234  TSEKRKHGALWDSS----SMDEKEVLWRVNFEECVKLLRHKACASHVNFSFGSDAKTVVE 289

Query: 929  RMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFLS 1108
             M  ATR   TT K   S  L+  +I   +RS       T   +R +L +M   + GF++
Sbjct: 290  AMLEATRKTETTVKAAFSDALTLNDIL-ILRSD-----WTAPVVRNALKRMV--EEGFIN 341

Query: 1109 RTGDHSGNYIINIRRIIQVTQTSEVEAIVS 1198
              GD   +Y + +++I+++ + +EVE+IVS
Sbjct: 342  SVGDAGSHYTVAMQKIVELARKTEVESIVS 371



 Score = 65.5 bits (158), Expect(2) = 2e-59
 Identities = 29/67 (43%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1246 QSKIAGKALLDARQSLGVLYRLLKDGYLQLQEIART-NDHAPAKTFYLWRVNESALKAQI 1422
            Q  I+ K L+  +++  +LY+L+K+ Y++LQE+ ++  D APA+TFYLW V+ S L + +
Sbjct: 393  QKAISEKCLIPDKEAWQLLYQLMKERYIELQEVPKSAGDRAPARTFYLWHVDFSKLSSVV 452

Query: 1423 VDDMYHA 1443
            ++DMYHA
Sbjct: 453  LEDMYHA 459


>ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
            sativus]
          Length = 518

 Score =  212 bits (539), Expect(2) = 6e-59
 Identities = 145/382 (37%), Positives = 203/382 (53%), Gaps = 8/382 (2%)
 Frame = +2

Query: 74   KLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGF 253
            K A  ++ +HFG+LV KVC  L+ KG LTL  L +FTEL PSQ+ N LL+LIQHNCVQ F
Sbjct: 9    KYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAF 68

Query: 254  KISSDDGSATGKAPTQYAIFLDTVLHRMRFPKF--LSTVRXXXXXXXXXXXXXXXXHGRL 427
               +D G A+ K  T Y      +LHRMRF KF  +++ +                +GRL
Sbjct: 69   ---TDFGDAS-KDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEGLLQNGRL 124

Query: 428  SFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSVDPKKKV 607
            S +QL ER     AE ++ P    + +S  KL++AHFVERCP  EP + P+    P +K 
Sbjct: 125  SMEQLVER-----AESRNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRK- 178

Query: 608  PRGATRRIKLDVNFETEEQRIAAAASLPDVERFNF----YLPKRNDHHTGAFGKKRKYVT 775
             RGA +  K+    ET EQR+  AA   +V RF+        ++++HH+   G+KRK+  
Sbjct: 179  -RGA-KAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDD 236

Query: 776  LEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATRSI 955
            LE    +G    D   LWR NY EF+   R KAC+   RS+ D     VL  +  ATRS 
Sbjct: 237  LEIAQDSG--DADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSS 294

Query: 956  ATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFLSRTGDHSGNY 1135
                K + + PLS + I   V  ++ G  MT+DR+  SL  +  P +       D+  + 
Sbjct: 295  EKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGI------DDYKISM 348

Query: 1136 I--INIRRIIQVTQTSEVEAIV 1195
               ++   II+  QT EVE+IV
Sbjct: 349  FTTVDFSMIIEQAQTDEVESIV 370



 Score = 45.1 bits (105), Expect(2) = 6e-59
 Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
 Frame = +1

Query: 1252 KIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTF-YLWRVNESALKAQIVD 1428
            KI+  + +D  ++  +LYRL KD YL ++++A T    P  +   LWRV+   L   ++D
Sbjct: 396  KISDSSFVDKNEAPKILYRLWKDEYLYMEKVALT---VPRHSLCLLWRVDRYNLWEHVLD 452

Query: 1429 DMYHA 1443
            +MYHA
Sbjct: 453  EMYHA 457


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  215 bits (547), Expect(2) = 1e-58
 Identities = 141/386 (36%), Positives = 197/386 (51%), Gaps = 12/386 (3%)
 Frame = +2

Query: 74   KLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGF 253
            KLA  LI + FGD   KVC+CL+ KG L L ++ +  +L+P Q+K  L VLIQHNCVQ F
Sbjct: 8    KLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQHNCVQAF 67

Query: 254  KISSDDGSATGKAP-TQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXXXHGRLS 430
             +  + G   G    TQY +  D +LHRMRFPK L+ V                 HG L+
Sbjct: 68   AMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAFLKHGWLT 127

Query: 431  FDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEP-VIPPRSSVDPKKKV 607
              Q+ +R  +   E     ++A L  SF KLV+AH+VERCP  +P ++PP     P +K 
Sbjct: 128  LQQILDRVPSNQNEGNCTVQDA-LRGSFTKLVNAHYVERCPAPDPFLVPPDEEKTPARKH 186

Query: 608  PRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRNDHHTG---------AFGKK 760
               + + ++     E  EQ   A A+    + F        D +             GKK
Sbjct: 187  DANSAKAVE---ELEIGEQCDIAKATPSKAKGFPVITDTCGDINGDKSIGNPPGVVIGKK 243

Query: 761  RKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFC 940
            RK   L+ D+ +G  S+  +  WR NY E V   R KAC+   R+RLD  A  VL  M  
Sbjct: 244  RKQDALKLDTESGAASEK-DVPWRANYKELVCHLRHKACIENVRARLDSGAAIVLSAMLE 302

Query: 941  ATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLSRTG 1117
            AT+S     K++ S  LS   IT AV  S+ G  MT++RIR SL+Q+ C P      RT 
Sbjct: 303  ATQSAEKNVKEEISVLLSISTITEAVMQSEAGCSMTLERIRASLVQLGCHPNGVGADRT- 361

Query: 1118 DHSGNYIINIRRIIQVTQTSEVEAIV 1195
                 Y I++++II++ Q  EVE++V
Sbjct: 362  -----YNIDLKKIIELAQNDEVESMV 382



 Score = 41.2 bits (95), Expect(2) = 1e-58
 Identities = 19/65 (29%), Positives = 35/65 (53%)
 Frame = +1

Query: 1249 SKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVD 1428
            +KI+    ++ +++  +LY+L KD  L +++I           F LW+V +      I+D
Sbjct: 407  TKISDTTFIEKKEAAKILYKLWKDECLHMEKIVLNESRQ--SQFMLWKVKKDTFWRHILD 464

Query: 1429 DMYHA 1443
            +MYHA
Sbjct: 465  EMYHA 469


>ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
            sativus]
          Length = 518

 Score =  210 bits (535), Expect(2) = 2e-58
 Identities = 145/382 (37%), Positives = 202/382 (52%), Gaps = 8/382 (2%)
 Frame = +2

Query: 74   KLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGF 253
            K A  ++ +HFG+LV KVC  L+ KG LTL  L +FTEL PSQ+ N LL+LIQHNCVQ F
Sbjct: 9    KYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAF 68

Query: 254  KISSDDGSATGKAPTQYAIFLDTVLHRMRFPKF--LSTVRXXXXXXXXXXXXXXXXHGRL 427
               +D G A  K  T Y      +LHRMRF KF  +++ +                +GRL
Sbjct: 69   ---TDFGDAP-KDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEGLLQNGRL 124

Query: 428  SFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSVDPKKKV 607
            S +QL ER     AE ++ P    + +S  KL++AHFVERCP  EP + P+    P +K 
Sbjct: 125  SMEQLVER-----AESRNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRK- 178

Query: 608  PRGATRRIKLDVNFETEEQRIAAAASLPDVERFNF----YLPKRNDHHTGAFGKKRKYVT 775
             RGA +  K+    ET EQR+  AA   +V RF+        ++++HH+   G+KRK+  
Sbjct: 179  -RGA-KAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDD 236

Query: 776  LEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATRSI 955
            LE    +G    D   LWR NY EF+   R KAC+   RS+ D     VL  +  ATRS 
Sbjct: 237  LEIAQDSG--DADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSS 294

Query: 956  ATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFLSRTGDHSGNY 1135
                K + + PLS + I   V  ++ G  MT+DR+  SL  +  P +       D+  + 
Sbjct: 295  EKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGM------DDYKISM 348

Query: 1136 I--INIRRIIQVTQTSEVEAIV 1195
               ++   II+  QT EVE+IV
Sbjct: 349  FTTVDFSMIIEQAQTDEVESIV 370



 Score = 45.1 bits (105), Expect(2) = 2e-58
 Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
 Frame = +1

Query: 1252 KIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTF-YLWRVNESALKAQIVD 1428
            KI+  + +D  ++  +LYRL KD YL ++++A T    P  +   LWRV+   L   ++D
Sbjct: 396  KISDSSFVDKNEAPKILYRLWKDEYLYMEKVALT---VPRHSLCLLWRVDRYNLWEHVLD 452

Query: 1429 DMYHA 1443
            +MYHA
Sbjct: 453  EMYHA 457


>ref|XP_004489521.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X1 [Cicer arietinum] gi|502119266|ref|XP_004496559.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC3-like [Cicer arietinum]
          Length = 513

 Score =  197 bits (500), Expect(3) = 4e-58
 Identities = 138/387 (35%), Positives = 193/387 (49%), Gaps = 6/387 (1%)
 Frame = +2

Query: 53   MVSRSAQKLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 232
            MVS+   K A  LI +HFG +V KVC  L+ +G LTL  L +FTEL+   +KN LLVLIQ
Sbjct: 1    MVSQWGIKFAVHLITNHFGKIVAKVCETLLRQGPLTLELLIRFTELSKEHVKNSLLVLIQ 60

Query: 233  HNCVQGFKISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXX 412
            HNCVQ F     D   + +  TQY +  D +LHR RFPKF+  V                
Sbjct: 61   HNCVQAFICEGGDVDES-RVKTQYLVLFDNILHRPRFPKFMEIVLQELDKHCEKVLEGLL 119

Query: 413  XHGRLSFDQLKERAKAQSAERKDGPEEA-GLEESFRKLVDAHFVERCPVAEPVIPPRSSV 589
              GRL+  Q+ +RA   +++  D    A  + E+  KL+ A +VERCP AE  I     +
Sbjct: 120  RDGRLTLKQMIDRASQGASQENDSAVVADAVRENLCKLLMARYVERCPAAEVTIVEEEII 179

Query: 590  DPKKKVPRGATRRIKLDVNF---ETEEQRIAAAASLPDVERFNFYLPKRNDHHTGAFGKK 760
              K    RGA    K D NF   ET  QR+  AA   D  RF+          T   G  
Sbjct: 180  TKK----RGA----KSDQNFKAPETTIQRVIEAAVPGDAIRFSL---------TADTGCN 222

Query: 761  RKYVTLEEDSRTGMPSDDIE-ALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMF 937
                T   D      ++  +  LWRVN+ EF+   R K  +   R+R+D  A TV+  M 
Sbjct: 223  SDEETKPADINVAENNEKEQLILWRVNFEEFLRYLRDKLLIENVRARMDDGAATVVRAML 282

Query: 938  CATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLSRT 1114
             ATR++    K + S PL  +++   V  ++ GL MT+DR++  L+Q+ CS Q+ F    
Sbjct: 283  EATRNVDKRVKIENSVPLELDQLFTEVIKTENGLQMTMDRVKAYLVQLGCSSQISFA--- 339

Query: 1115 GDHSGNYIINIRRIIQVTQTSEVEAIV 1195
                  Y I+++ II + +  EVE+IV
Sbjct: 340  ------YTIDLKHIIHLARNEEVESIV 360



 Score = 44.7 bits (104), Expect(3) = 4e-58
 Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = +1

Query: 1252 KIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKT-FYLWRVNESALKAQIVD 1428
            KIA   L++ +++  +L RLLKD YL ++++  +   +  +T   +WRVN+  L   ++D
Sbjct: 386  KIAESTLVEKKEAPKLLNRLLKDNYLHMEKLNVSVVGSNKQTQLLMWRVNQPLLWEYVLD 445

Query: 1429 DMYHA 1443
            +MYHA
Sbjct: 446  EMYHA 450



 Score = 33.5 bits (75), Expect(3) = 4e-58
 Identities = 15/38 (39%), Positives = 27/38 (71%)
 Frame = +3

Query: 1554 ITLSNRQREQAERIRKIATILETSLLKLDDSILLFDCF 1667
            IT S   +++ +R++ +  +L +SLLKLDD+++LF  F
Sbjct: 476  ITASEPLQKKYKRLQNVCLLLGSSLLKLDDALMLFHDF 513


>ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
            max]
          Length = 518

 Score =  204 bits (519), Expect(2) = 1e-57
 Identities = 135/385 (35%), Positives = 197/385 (51%), Gaps = 4/385 (1%)
 Frame = +2

Query: 53   MVSRSAQKLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 232
            MV++   K A  LI  HFG +V KVC  L   G LTL +L ++T+L   Q++N LLVL+Q
Sbjct: 1    MVTQHGIKFAVHLITKHFGKIVAKVCENLFIHGPLTLDQLVRYTDLTKDQVRNSLLVLVQ 60

Query: 233  HNCVQGFKIS---SDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXX 403
            HNCVQ F  +    DD +   +  TQY +  D++LHR+RFPKFL  V             
Sbjct: 61   HNCVQAFVSAPQDDDDDADRLRVRTQYLVLFDSILHRLRFPKFLEIVSRKLDEECVKLLD 120

Query: 404  XXXXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRS 583
                 GRL+  Q+ +R   +S  +++      + E+  KL+ A FVERCP  EPV+    
Sbjct: 121  GLLRDGRLTLKQMVDR---ESQRKENAVPTKVVRETLCKLLTARFVERCPAPEPVVSTSF 177

Query: 584  SVDPKKKVPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRNDHHTGAFGKKR 763
                 +K  RGA +  K+    ET EQR+  AA   DV RF+     R            
Sbjct: 178  KETTTRK--RGA-KSAKIFEAPETLEQRVVDAAVPGDVIRFSLAADTRCSVDRETNSDDA 234

Query: 764  KYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCA 943
            + +++EE+      + + + LWR N+ EF+   R K  +   R++ D    TVL  +  A
Sbjct: 235  QMISVEEE-----VAKEGQILWRANFEEFIRHLRHKVLIENVRTQHDDGTATVLSAVLEA 289

Query: 944  TRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLSRTGD 1120
            TRS+    K + S PLS + I   V  +  G  MTVDRIR SL+Q+ CSP +        
Sbjct: 290  TRSVQKKVKTENSVPLSLDTIITEVMKTDTGRTMTVDRIRASLVQLGCSPSMIL------ 343

Query: 1121 HSGNYIINIRRIIQVTQTSEVEAIV 1195
               +Y I++++II+  +  EVE+IV
Sbjct: 344  -EESYSIDLKKIIEPARNEEVESIV 367



 Score = 48.1 bits (113), Expect(2) = 1e-57
 Identities = 22/64 (34%), Positives = 40/64 (62%)
 Frame = +1

Query: 1252 KIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDD 1431
            +IA   L++ +++  +LY+L KD YL ++++  T   A   T  +W+VN+  L   ++D+
Sbjct: 393  QIAASTLVEKKEASKLLYKLWKDNYLYMEKVGATVG-AKQTTILMWKVNKPLLWEYVLDE 451

Query: 1432 MYHA 1443
            MYHA
Sbjct: 452  MYHA 455


>ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X3 [Citrus sinensis]
          Length = 444

 Score =  225 bits (574), Expect(2) = 2e-57
 Identities = 147/391 (37%), Positives = 208/391 (53%), Gaps = 9/391 (2%)
 Frame = +2

Query: 53   MVSRSAQKLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 232
            M++    K A  +I +HFGDLV KVC CL+ KG LT   + ++TEL+  Q+KN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 233  HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 409
             NCVQ F     DG A G KA TQY +  D +LHR+RF KFL+ +               
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 410  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 589
              HGRL+  Q+ +RAK+ S +  +  +   L E+  KLV AH+VERCP +EP++ P S  
Sbjct: 121  LEHGRLTLKQMFDRAKS-SEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEE 179

Query: 590  D-PKKKVPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL-------PKRNDHHTG 745
            + P +K    + ++I      ET EQ++  AA   +  RF+           K  + +  
Sbjct: 180  EGPARKKGSKSAKKIG---EPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNV 236

Query: 746  AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVL 925
              G+KRK+  LE D   G+ +D+   ++R N+  F+ R R K C+   R+ LD  A  VL
Sbjct: 237  TPGEKRKHDVLELD-ECGV-ADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294

Query: 926  DRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFL 1105
              M  AT S     K   S PLS   I   V  S+ G  MT+D +R SL+Q+     G L
Sbjct: 295  SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQL-----GEL 349

Query: 1106 SRTGDHSGNYIINIRRIIQVTQTSEVEAIVS 1198
            S     S +Y I+  +II++ Q  EVE++VS
Sbjct: 350  SFVDASSDSYSIDFEKIIEIAQNEEVESVVS 380



 Score = 26.2 bits (56), Expect(2) = 2e-57
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 1252 KIAGKALLDARQSLGVLYRLLKDGYLQLQ 1338
            KI+    ++ + +  +LY+L KDGYL ++
Sbjct: 405  KISDTTFVEKKDAPKILYKLWKDGYLLME 433


>ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
            gi|557523805|gb|ESR35172.1| hypothetical protein
            CICLE_v10004721mg [Citrus clementina]
          Length = 433

 Score =  225 bits (574), Expect(2) = 2e-57
 Identities = 147/391 (37%), Positives = 208/391 (53%), Gaps = 9/391 (2%)
 Frame = +2

Query: 53   MVSRSAQKLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 232
            M++    K A  +I +HFGDLV KVC CL+ KG LT   + ++TEL+  Q+KN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 233  HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 409
             NCVQ F     DG A G KA TQY +  D +LHR+RF KFL+ +               
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 410  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 589
              HGRL+  Q+ +RAK+ S +  +  +   L E+  KLV AH+VERCP +EP++ P S  
Sbjct: 121  LEHGRLTLKQMFDRAKS-SEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEE 179

Query: 590  D-PKKKVPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL-------PKRNDHHTG 745
            + P +K    + ++I      ET EQ++  AA   +  RF+           K  + +  
Sbjct: 180  EGPARKKGSKSAKKIG---EPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNV 236

Query: 746  AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVL 925
              G+KRK+  LE D   G+ +D+   ++R N+  F+ R R K C+   R+ LD  A  VL
Sbjct: 237  TPGEKRKHDVLELD-ECGV-ADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294

Query: 926  DRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFL 1105
              M  AT S     K   S PLS   I   V  S+ G  MT+D +R SL+Q+     G L
Sbjct: 295  SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQL-----GEL 349

Query: 1106 SRTGDHSGNYIINIRRIIQVTQTSEVEAIVS 1198
            S     S +Y I+  +II++ Q  EVE++VS
Sbjct: 350  SFVDASSDSYSIDFEKIIEIAQNEEVESVVS 380



 Score = 26.2 bits (56), Expect(2) = 2e-57
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 1252 KIAGKALLDARQSLGVLYRLLKDGYLQLQ 1338
            KI+    ++ + +  +LY+L KDGYL ++
Sbjct: 405  KISDTTFVEKKDAPKILYKLWKDGYLLME 433