BLASTX nr result

ID: Ephedra26_contig00008081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00008081
         (1536 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008937858.1| protein of unknown function [Magnetospirillu...    55   2e-13

>ref|YP_008937858.1| protein of unknown function [Magnetospirillum gryphiswaldense MSR-1
           v2] gi|568205844|ref|WP_024080208.1| hypothetical
           protein [Magnetospirillum gryphiswaldense]
           gi|78033430|emb|CAJ30045.1| conserved hypothetical
           protein [Magnetospirillum gryphiswaldense MSR-1]
           gi|566555979|emb|CDK99198.1| protein of unknown function
           [Magnetospirillum gryphiswaldense MSR-1 v2]
          Length = 259

 Score = 55.1 bits (131), Expect(2) = 2e-13
 Identities = 28/56 (50%), Positives = 34/56 (60%)
 Frame = -3

Query: 859 SLTHYAKGTPFHLRKKGYDWMARIGFEGSVALPYHGFFSPFPHGTAPLWFMEEYVG 692
           SLTHY KGTP   ++       R    G+V+LP  G FSPFPHGT+ L   EEY+G
Sbjct: 69  SLTHYTKGTPSPFKRA--PTACRHSVSGTVSLPLSGCFSPFPHGTSSLSVTEEYLG 122



 Score = 49.3 bits (116), Expect(2) = 2e-13
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
 Frame = -1

Query: 1032 LAFHP*PQVIPVFCHIRGFGPTMQL-DGSTCSWLDRSVSG 916
            +AFHP PQ+IP F + RGFGP + +   STC W+D SVSG
Sbjct: 1    MAFHPYPQIIPDFFNRRGFGPPVGVTPPSTCPWIDHSVSG 40


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