BLASTX nr result
ID: Ephedra26_contig00007867
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00007867
(1608 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI30093.3| unnamed protein product [Vitis vinifera] 172 4e-40
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I... 172 4e-40
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I... 169 3e-39
ref|XP_006830353.1| hypothetical protein AMTR_s00116p00085310 [A... 168 5e-39
ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Popu... 167 9e-39
ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citr... 166 3e-38
ref|XP_003576358.1| PREDICTED: uncharacterized protein LOC100836... 166 3e-38
ref|XP_002876396.1| eukaryotic rpb5 RNA polymerase subunit famil... 166 3e-38
gb|EOY09046.1| Eukaryotic rpb5 RNA polymerase subunit family pro... 164 1e-37
gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subun... 162 5e-37
ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V sub... 162 5e-37
ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, I... 161 6e-37
ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III ... 161 6e-37
ref|NP_001065723.1| Os11g0143400 [Oryza sativa Japonica Group] g... 160 1e-36
gb|AFK43162.1| unknown [Medicago truncatula] 159 3e-36
ref|NP_001066119.1| Os12g0139500 [Oryza sativa Japonica Group] g... 159 3e-36
gb|ABA96407.2| RNA polymerase Rpb5, N-terminal domain containing... 159 3e-36
gb|ESW34110.1| hypothetical protein PHAVU_001G125200g [Phaseolus... 158 5e-36
gb|EPS63634.1| hypothetical protein M569_11151 [Genlisea aurea] 158 7e-36
gb|EMJ03728.1| hypothetical protein PRUPE_ppa010980mg [Prunus pe... 158 7e-36
>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 172 bits (436), Expect = 4e-40
Identities = 91/215 (42%), Positives = 132/215 (61%), Gaps = 1/215 (0%)
Frame = -3
Query: 1474 CLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRENLR 1295
CL F+D+G ESHR + RRTLL+ML DRG+ + D+++ L FR + +P + LR
Sbjct: 121 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 180
Query: 1294 IITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSAL-PEGIRHAILIVPEKVTSQAK 1118
I RSDPS KI V F G + + ++ +R + + + + IL++ +TSQA
Sbjct: 181 ISAALRSDPSKKILVIFC---GPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQAL 237
Query: 1117 KAVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPRMLE 938
KAV S F VE F+ TDLL+NIT+H L P+H KYS+ E QLPRML+
Sbjct: 238 KAVDLFS--FQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQ 295
Query: 937 SDPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
D +A+YYGL +G+V+K++Y+G++TG TYRC+W
Sbjct: 296 QDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCVW 330
>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Vitis vinifera]
Length = 229
Score = 172 bits (436), Expect = 4e-40
Identities = 91/215 (42%), Positives = 132/215 (61%), Gaps = 1/215 (0%)
Frame = -3
Query: 1474 CLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRENLR 1295
CL F+D+G ESHR + RRTLL+ML DRG+ + D+++ L FR + +P + LR
Sbjct: 20 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 79
Query: 1294 IITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSAL-PEGIRHAILIVPEKVTSQAK 1118
I RSDPS KI V F G + + ++ +R + + + + IL++ +TSQA
Sbjct: 80 ISAALRSDPSKKILVIFC---GPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQAL 136
Query: 1117 KAVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPRMLE 938
KAV S F VE F+ TDLL+NIT+H L P+H KYS+ E QLPRML+
Sbjct: 137 KAVDLFS--FQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQ 194
Query: 937 SDPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
D +A+YYGL +G+V+K++Y+G++TG TYRC+W
Sbjct: 195 QDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCVW 229
>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
[Cucumis sativus]
Length = 227
Score = 169 bits (428), Expect = 3e-39
Identities = 90/220 (40%), Positives = 132/220 (60%), Gaps = 1/220 (0%)
Frame = -3
Query: 1489 VRMGSCLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPP 1310
V G+CL ++D G ESHR F RRT+++ML DRG+ ++ +++ L QFR FG P
Sbjct: 13 VEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPD 72
Query: 1309 RENLRIITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSS-ALPEGIRHAILIVPEKV 1133
+ L++ SDPS ++ V F G + ++ +R A + + ILIV ++
Sbjct: 73 VDRLKLSAAHHSDPSKRVLVVFC---GTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQI 129
Query: 1132 TSQAKKAVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQL 953
T+QA KAV+ S F VE+F+ TDLL+NIT+HAL P H +YS+ E QL
Sbjct: 130 TNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQL 187
Query: 952 PRMLESDPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
PRML +D +A+YYGL +G+V+K+ Y GD+T TYRC+W
Sbjct: 188 PRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHITYRCVW 227
>ref|XP_006830353.1| hypothetical protein AMTR_s00116p00085310 [Amborella trichopoda]
gi|548836623|gb|ERM97769.1| hypothetical protein
AMTR_s00116p00085310 [Amborella trichopoda]
Length = 216
Score = 168 bits (426), Expect = 5e-39
Identities = 84/214 (39%), Positives = 130/214 (60%)
Frame = -3
Query: 1477 SCLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRENL 1298
+CL +D+G ESHRLF+ R+T+ +ML DRG+ VSD DL+M L FR ++G P L
Sbjct: 5 NCLCKLLDRGSVESHRLFRARKTVFEMLRDRGYSVSDNDLSMTLPHFRELYGEEPDTSQL 64
Query: 1297 RIITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSALPEGIRHAILIVPEKVTSQAK 1118
I T DPS +I V F + ++ +R ++ L E + AI++ +T QA+
Sbjct: 65 TITTAMDRDPSQRIMVLFCAVDAAK---LAHMREYIKQILNEKVHDAIIVYRNSMTPQAR 121
Query: 1117 KAVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPRMLE 938
A+KE+ + VE+F+ +DLL+NIT+H L P+H KYSV ++QLPRML+
Sbjct: 122 IAIKEMPSPYSVELFQMSDLLVNITEHVLKPKHDILTPEEKDELLKKYSVTDNQLPRMLQ 181
Query: 937 SDPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCI 836
+D +++YYGL+ G+++K+ YS + TYRC+
Sbjct: 182 TDAISRYYGLKPGQIVKITYSDEPIESFMTYRCV 215
>ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Populus trichocarpa]
gi|550320761|gb|EEF05018.2| hypothetical protein
POPTR_0016s03800g [Populus trichocarpa]
Length = 243
Score = 167 bits (424), Expect = 9e-39
Identities = 87/217 (40%), Positives = 132/217 (60%)
Frame = -3
Query: 1483 MGSCLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRE 1304
+G CL F+D+G ESHR + RRT+L+ML DRG+ V +++++ L FRG++G P E
Sbjct: 31 LGRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIE 90
Query: 1303 NLRIITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSALPEGIRHAILIVPEKVTSQ 1124
L+ +SDPS ++ V F G K+G+ L + + + IL++ +T+Q
Sbjct: 91 LLKFSATHKSDPSKRMLVIFCG-LGVVKVGMIRL-ITVQITDRDSLTGLILVLQNNITNQ 148
Query: 1123 AKKAVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPRM 944
A KA+ F +E+F+ TDLL+NIT+H L P+H KYS+ E QLPR+
Sbjct: 149 AMKALDLFK--FKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKYSIEEKQLPRL 206
Query: 943 LESDPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
L+ D +++YYGL RG+V+K+ Y GD+TG TYRC+W
Sbjct: 207 LKKDAISRYYGLERGQVVKVTYDGDITGSHVTYRCVW 243
>ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
gi|568879109|ref|XP_006492520.1| PREDICTED: DNA-directed
RNA polymerase V subunit 5A-like isoform X1 [Citrus
sinensis] gi|557544341|gb|ESR55319.1| hypothetical
protein CICLE_v10021999mg [Citrus clementina]
Length = 236
Score = 166 bits (420), Expect = 3e-38
Identities = 92/216 (42%), Positives = 133/216 (61%), Gaps = 1/216 (0%)
Frame = -3
Query: 1477 SCLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRENL 1298
SCL F+D G +S R + RRT+L+ML DRG+ V+ +++N+ + FR I+G P + L
Sbjct: 26 SCLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVALSEINLSVQDFRAIYGQDPDVDRL 85
Query: 1297 RIITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSALP-EGIRHAILIVPEKVTSQA 1121
RI +SDPS +I V F G + ++ +R +S + + + ILI+ ++TSQA
Sbjct: 86 RISISHQSDPSKRILVVFC---GPGIVKVNVIRSIISQIVNRDTLTGLILILQNQITSQA 142
Query: 1120 KKAVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPRML 941
KAV F VEMF+ TDLL+NIT+H L P+H KYS+ E QLPRML
Sbjct: 143 TKAVGLFQ--FKVEMFQITDLLVNITKHVLKPKHQVLTDQEKEKLLKKYSIEEKQLPRML 200
Query: 940 ESDPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
+ D +A+YYGL RG+V+K+ YSG++T TYRC+W
Sbjct: 201 KKDAIAQYYGLERGQVVKVTYSGEITESHVTYRCVW 236
>ref|XP_003576358.1| PREDICTED: uncharacterized protein LOC100836489 [Brachypodium
distachyon]
Length = 468
Score = 166 bits (419), Expect = 3e-38
Identities = 88/214 (41%), Positives = 128/214 (59%)
Frame = -3
Query: 1474 CLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRENLR 1295
C+ +D GDPESHRLF RRT L+ML DR + V + DL L +FR + RP + L
Sbjct: 259 CVSSMIDSGDPESHRLFLARRTALEMLRDRRYAVPEADLARTLPEFRAWWAERPEIDRLS 318
Query: 1294 IITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSALPEGIRHAILIVPEKVTSQAKK 1115
T SDPS K+ + F E I+ +R E + IL++ K+TS+AK
Sbjct: 319 FSTTLASDPSNKVQLVFCPP---EPFKIAAIREVYGRVKDENLSCLILVLQSKITSRAKD 375
Query: 1114 AVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPRMLES 935
A+KEI + V++F+ +LL+N+T+H L PEH KY+V++ QLPRMLE+
Sbjct: 376 AIKEIF-KYKVDVFQIAELLVNVTKHVLKPEHEVLTPEEKAHLLKKYNVVDSQLPRMLET 434
Query: 934 DPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
D +A+YYGL +G V+++ Y G++TG+ TYRCI+
Sbjct: 435 DAIARYYGLGKGTVLRVTYDGELTGNHVTYRCIF 468
>ref|XP_002876396.1| eukaryotic rpb5 RNA polymerase subunit family protein [Arabidopsis
lyrata subsp. lyrata] gi|297322234|gb|EFH52655.1|
eukaryotic rpb5 RNA polymerase subunit family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 222
Score = 166 bits (419), Expect = 3e-38
Identities = 88/215 (40%), Positives = 128/215 (59%), Gaps = 1/215 (0%)
Frame = -3
Query: 1474 CLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRENLR 1295
CL ++D ESHR + R+ LQML DRG+ VSD D+N+ L FR ++G RP + LR
Sbjct: 13 CLSKYVDPSSEESHRYYLARQNALQMLRDRGYQVSDEDINLSLHDFRAVYGERPDVDRLR 72
Query: 1294 IITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSALP-EGIRHAILIVPEKVTSQAK 1118
I Q RSD S K+ V F G + ++ +R + L E + IL++ +VT QA
Sbjct: 73 ISAQHRSDSSKKVKVVFF---GTGMVKVNAIRSIAADVLSQETVTGLILVLQSQVTKQAM 129
Query: 1117 KAVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPRMLE 938
KA++ S F VE+F+ TDLL+NIT+HAL P+H K+S+ E QLPR+ +
Sbjct: 130 KAIELFS--FKVEIFQITDLLVNITKHALKPQHRVLNDKEKTTLLKKFSIEEKQLPRISK 187
Query: 937 SDPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
D + +YYGL +G+V+K+ Y G++T YRC+W
Sbjct: 188 KDAIVRYYGLEKGQVVKVNYRGELTESHVAYRCVW 222
>gb|EOY09046.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 228
Score = 164 bits (414), Expect = 1e-37
Identities = 87/218 (39%), Positives = 130/218 (59%), Gaps = 1/218 (0%)
Frame = -3
Query: 1483 MGSCLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRE 1304
+G CL +D G ESHR + RRT+L+ML DRG+ V +++N+ L +FR I+G P +
Sbjct: 16 LGKCLSGVVDDGSTESHRYYLSRRTVLEMLRDRGYAVPISEINLSLQEFRAIYGQSPDFD 75
Query: 1303 NLRIITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSAL-PEGIRHAILIVPEKVTS 1127
LR+ ++DPS +I V F G + +S +R E + IL++ +T+
Sbjct: 76 RLRLSATHKTDPSKRILVVFY---GPGMVKVSGIRLIAGLITNKESLTGLILVLQNHITN 132
Query: 1126 QAKKAVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPR 947
QA KA+ S F VE+F+ TDLL+NIT+H L P+H KYS+ E QLPR
Sbjct: 133 QALKALDLFS--FKVEIFQITDLLVNITKHVLKPKHQVLTEQEKQKLLQKYSIEEKQLPR 190
Query: 946 MLESDPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
+L+ D +A+YYG RG+V+K++Y G++T TYRC+W
Sbjct: 191 LLKKDAIARYYGYERGQVVKVMYDGEITQSHVTYRCVW 228
>gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 231
Score = 162 bits (409), Expect = 5e-37
Identities = 90/218 (41%), Positives = 132/218 (60%), Gaps = 1/218 (0%)
Frame = -3
Query: 1483 MGSCLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRE 1304
+G+CL +DKG ESHR F R TLL+ML DRG+ V +D+N+ L FR I+G P +
Sbjct: 19 LGTCLSSLIDKGSVESHRYFLSRITLLEMLKDRGYSVPSSDINLSLHDFRQIYGQIPDVD 78
Query: 1303 NLRIITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSALPEG-IRHAILIVPEKVTS 1127
LR SDPS +I V F + G K ++ +R + + IL++ ++T+
Sbjct: 79 RLRFSVTHLSDPSKRILVIFCEP-GVVK--VTSVRGIAGQIVNRNTLTGLILVLQSQMTN 135
Query: 1126 QAKKAVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPR 947
QA+KAV+ + F VE+F+ TDLL+NIT+H L P+H KYS+ QLPR
Sbjct: 136 QAQKAVELLP--FKVEIFQITDLLINITKHLLRPKHRVLTDQEKQKLLKKYSIEVKQLPR 193
Query: 946 MLESDPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
M ++D +A+YYGL +G+V+K++YSG +T TYRC+W
Sbjct: 194 MSKNDAIARYYGLEKGQVVKIIYSGGITDSYITYRCVW 231
>ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 162 bits (409), Expect = 5e-37
Identities = 85/218 (38%), Positives = 131/218 (60%), Gaps = 1/218 (0%)
Frame = -3
Query: 1483 MGSCLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRE 1304
+G+CL F+D G ESHR F RRT+L+ML DRGF + +++++ L +FR +G P E
Sbjct: 15 LGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQEFREKYGQTPDVE 74
Query: 1303 NLRIITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSAL-PEGIRHAILIVPEKVTS 1127
LR+ R+D + K+ V F G + ++ +R L+ + E + IL++ ++T+
Sbjct: 75 RLRVSAMHRNDLTNKVLVIFC---GPNAVKVNVIRSILTQIMNKESLSRLILVIQNQMTN 131
Query: 1126 QAKKAVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPR 947
A KAV+ S F VE+F+ TDLL+NIT+H L P H KY++ E QLPR
Sbjct: 132 PAMKAVELFS--FKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKYNLEEKQLPR 189
Query: 946 MLESDPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
M + D +A+YYGL +G+V+K+ YS ++ TYRC+W
Sbjct: 190 MSQKDAIARYYGLEKGQVVKVTYSSEIIETHVTYRCVW 227
>ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Solanum lycopersicum]
Length = 227
Score = 161 bits (408), Expect = 6e-37
Identities = 85/218 (38%), Positives = 131/218 (60%), Gaps = 1/218 (0%)
Frame = -3
Query: 1483 MGSCLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRE 1304
+G+CL F+D G ESHR F RRT+L+ML DRGF + +++++ L +FR +G P E
Sbjct: 15 LGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQEFREKYGQTPDVE 74
Query: 1303 NLRIITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSAL-PEGIRHAILIVPEKVTS 1127
LR+ R+D + K+ V F G + ++ +R L+ + E + IL++ ++T+
Sbjct: 75 RLRVSAMHRNDLTNKVLVIFC---GPNAVKVNVIRSILTQIMNKESLSRLILVIQNQMTN 131
Query: 1126 QAKKAVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPR 947
A KAV+ S F VE+F+ TDLL+NIT+H L P H KY++ E QLPR
Sbjct: 132 PALKAVELFS--FKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKYNLEEKQLPR 189
Query: 946 MLESDPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
M + D +A+YYGL +G+V+K+ YS ++ TYRC+W
Sbjct: 190 MSQKDAIARYYGLEKGQVVKVTYSSEIIETHVTYRCVW 227
>ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Medicago
truncatula] gi|124359979|gb|ABN07995.1| RNA polymerase
subunit, RPB5; RNA polymerase Rpb5, N-terminal [Medicago
truncatula] gi|355500048|gb|AES81251.1| DNA-directed RNA
polymerases I, II, and III subunit RPABC1 [Medicago
truncatula]
Length = 248
Score = 161 bits (408), Expect = 6e-37
Identities = 88/214 (41%), Positives = 128/214 (59%)
Frame = -3
Query: 1474 CLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRENLR 1295
CL D G ESHR + RRT+L+ML DRG+ + ++ + LD FR I G P + LR
Sbjct: 39 CLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLR 98
Query: 1294 IITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSALPEGIRHAILIVPEKVTSQAKK 1115
+ ++PS +I V FS + G+ D+ + + E + ILIV ++TSQA K
Sbjct: 99 LTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNR--ESLTGLILIVQNQITSQALK 156
Query: 1114 AVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPRMLES 935
AV +S F VE+F+ TDLL+N T+H L P+H KY + E QLPRML++
Sbjct: 157 AVNLLS--FKVEIFQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQT 214
Query: 934 DPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
D +A+YYGL+RG+V+K+ Y+G++T TYRC+W
Sbjct: 215 DAIARYYGLQRGQVVKVTYTGEITQMHVTYRCVW 248
>ref|NP_001065723.1| Os11g0143400 [Oryza sativa Japonica Group] gi|77548620|gb|ABA91417.1|
RNA polymerase Rpb5, N-terminal domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113644427|dbj|BAF27568.1| Os11g0143400 [Oryza sativa
Japonica Group] gi|125576186|gb|EAZ17408.1| hypothetical
protein OsJ_32930 [Oryza sativa Japonica Group]
Length = 227
Score = 160 bits (405), Expect = 1e-36
Identities = 82/214 (38%), Positives = 128/214 (59%)
Frame = -3
Query: 1474 CLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRENLR 1295
C+ +D+G ESHRLF RRT ++ML DRG+ V + ++ L +FR + +P E L
Sbjct: 18 CIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLA 77
Query: 1294 IITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSALPEGIRHAILIVPEKVTSQAKK 1115
T SDPS K+ + F E + I+ +R E + +LI+ K+ S+A++
Sbjct: 78 FTTTLVSDPSKKVQLVFCPP---EPVKIATIREIYLQTKEENLSRLVLILQSKILSRARE 134
Query: 1114 AVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPRMLES 935
A+KEI F V++F+ TDLL+NIT+H L P+H +Y+V + QLPRMLE+
Sbjct: 135 AIKEIF-KFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLET 193
Query: 934 DPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
D +A+YYG +G V+K++Y G++TG + YRC++
Sbjct: 194 DAVARYYGFDKGTVVKVIYDGELTGKRVAYRCVF 227
>gb|AFK43162.1| unknown [Medicago truncatula]
Length = 248
Score = 159 bits (402), Expect = 3e-36
Identities = 87/214 (40%), Positives = 127/214 (59%)
Frame = -3
Query: 1474 CLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRENLR 1295
CL D G ESHR + RRT+L+ML DRG+ + ++ + LD FR I G P + LR
Sbjct: 39 CLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLR 98
Query: 1294 IITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSALPEGIRHAILIVPEKVTSQAKK 1115
+ ++PS +I V FS + G+ D+ + + E + ILIV ++TSQA K
Sbjct: 99 LTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNR--ESLTGLILIVQNQITSQALK 156
Query: 1114 AVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPRMLES 935
AV +S F VE+ + TDLL+N T+H L P+H KY + E QLPRML++
Sbjct: 157 AVNLLS--FKVEILQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQT 214
Query: 934 DPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
D +A+YYGL+RG+V+K+ Y+G++T TYRC+W
Sbjct: 215 DAIARYYGLQRGQVVKVTYTGEITQMHVTYRCVW 248
>ref|NP_001066119.1| Os12g0139500 [Oryza sativa Japonica Group]
gi|113648626|dbj|BAF29138.1| Os12g0139500 [Oryza sativa
Japonica Group] gi|125535725|gb|EAY82213.1| hypothetical
protein OsI_37416 [Oryza sativa Indica Group]
gi|125578454|gb|EAZ19600.1| hypothetical protein
OsJ_35178 [Oryza sativa Japonica Group]
gi|346703760|emb|CBX24428.1| hypothetical_protein [Oryza
glaberrima]
Length = 227
Score = 159 bits (402), Expect = 3e-36
Identities = 82/214 (38%), Positives = 127/214 (59%)
Frame = -3
Query: 1474 CLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRENLR 1295
C+ +D+G ESHRLF RRT ++ML DRG+ V + ++ L +FR + +P E L
Sbjct: 18 CIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLA 77
Query: 1294 IITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSALPEGIRHAILIVPEKVTSQAKK 1115
T SDPS K+ + F E + I+ +R E + +LI+ K+ S+A++
Sbjct: 78 FTTTLVSDPSKKVQLVFCPP---EPVKIATIREIYLQTKEENLSRLVLILQSKILSRARE 134
Query: 1114 AVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPRMLES 935
A+KEI F V++F+ TDLL+NIT+H L P+H +Y+V + QLPRMLE+
Sbjct: 135 AIKEIF-KFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLET 193
Query: 934 DPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
D +A+YYG +G V+K+ Y G++TG + YRC++
Sbjct: 194 DAVARYYGFDKGTVVKVTYDGELTGKRVAYRCVF 227
>gb|ABA96407.2| RNA polymerase Rpb5, N-terminal domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 335
Score = 159 bits (402), Expect = 3e-36
Identities = 82/214 (38%), Positives = 127/214 (59%)
Frame = -3
Query: 1474 CLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRENLR 1295
C+ +D+G ESHRLF RRT ++ML DRG+ V + ++ L +FR + +P E L
Sbjct: 126 CIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLA 185
Query: 1294 IITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSALPEGIRHAILIVPEKVTSQAKK 1115
T SDPS K+ + F E + I+ +R E + +LI+ K+ S+A++
Sbjct: 186 FTTTLVSDPSKKVQLVFCPP---EPVKIATIREIYLQTKEENLSRLVLILQSKILSRARE 242
Query: 1114 AVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPRMLES 935
A+KEI F V++F+ TDLL+NIT+H L P+H +Y+V + QLPRMLE+
Sbjct: 243 AIKEIF-KFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLET 301
Query: 934 DPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
D +A+YYG +G V+K+ Y G++TG + YRC++
Sbjct: 302 DAVARYYGFDKGTVVKVTYDGELTGKRVAYRCVF 335
>gb|ESW34110.1| hypothetical protein PHAVU_001G125200g [Phaseolus vulgaris]
Length = 242
Score = 158 bits (400), Expect = 5e-36
Identities = 88/215 (40%), Positives = 129/215 (60%), Gaps = 1/215 (0%)
Frame = -3
Query: 1474 CLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRENLR 1295
CL F+D G ESHR + RRT L+ML DRG+ + ++++ L QFR + G+ P + LR
Sbjct: 33 CLSKFIDDGTVESHRYYLSRRTTLEMLKDRGYSIPSNEIDLSLSQFRHMHGHSPDPDRLR 92
Query: 1294 IITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSALP-EGIRHAILIVPEKVTSQAK 1118
+ ++PS +I V F G + ++ +R + + + ILIV VTSQA
Sbjct: 93 LSLAHATNPSKRILVIFC---GPGVVKVTAIRNIAGQIVNRDTLSGLILIVENHVTSQAL 149
Query: 1117 KAVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPRMLE 938
KAV S F VE+F+ TDLL+NIT+H L P+H K+++ E QLPRML+
Sbjct: 150 KAVGLFS--FKVEIFQITDLLVNITKHVLKPKHQVLTDRQKKNLLKKFNIEEKQLPRMLQ 207
Query: 937 SDPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
+D +A+YYGL RG+V+K+ YSG++T TYRC+W
Sbjct: 208 TDAIARYYGLERGQVVKVTYSGEITQMHVTYRCVW 242
>gb|EPS63634.1| hypothetical protein M569_11151 [Genlisea aurea]
Length = 241
Score = 158 bits (399), Expect = 7e-36
Identities = 91/229 (39%), Positives = 128/229 (55%), Gaps = 12/229 (5%)
Frame = -3
Query: 1483 MGSCLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRE 1304
+G+CL F+DKG ESHR + R+TLL+ML DRGF +S D+++ L +FR P +
Sbjct: 18 LGTCLSSFVDKGSLESHRYYLARKTLLEMLKDRGFAISPADIDITLQEFRIRHSESPSVD 77
Query: 1303 NLRIITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSSALPEG-IRHAILIVPEKVTS 1127
L+I DPS K+ V F G + ++ +R G I IL+ K+TS
Sbjct: 78 GLKITALHGDDPSIKVLVLF---CGPGIVKVNQIRAIAGDVYNNGTISSLILVAQSKITS 134
Query: 1126 QAKKAVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQ--- 956
QA KAV + F VE+F+ TDLL+NIT+H L P+H KYS+ E Q
Sbjct: 135 QALKAVNILK--FKVEIFQITDLLVNITKHDLKPKHQILSAEEKADLLSKYSIEEKQASK 192
Query: 955 --------LPRMLESDPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
LPRML+ D +A+YYGL +G+V+K+ Y G++T TYRC+W
Sbjct: 193 SKKASEAFLPRMLQKDAIARYYGLEKGQVVKVTYGGELTQLHVTYRCVW 241
>gb|EMJ03728.1| hypothetical protein PRUPE_ppa010980mg [Prunus persica]
Length = 228
Score = 158 bits (399), Expect = 7e-36
Identities = 85/218 (38%), Positives = 129/218 (59%), Gaps = 1/218 (0%)
Frame = -3
Query: 1483 MGSCLEMFMDKGDPESHRLFKVRRTLLQMLDDRGFYVSDTDLNMPLDQFRGIFGNRPPRE 1304
+G CL ++D G PESHR + RRT+L+M+ DRG+ V +++++ L FR + G P E
Sbjct: 16 LGPCLTGYVDDGSPESHRYYLSRRTVLEMIRDRGYSVPSSEIDLSLQDFRALHGQNPDVE 75
Query: 1303 NLRIITQKRSDPSYKISVAFSQKTGKEKLGISDLRYFLSS-ALPEGIRHAILIVPEKVTS 1127
LR R+DPS +I V + G + ++ +R S A + + ILI ++TS
Sbjct: 76 RLRFSATHRTDPSDRIMVIYC---GPGIVKVNVIRGLHSQIANKDTLNGLILITQNQITS 132
Query: 1126 QAKKAVKEISGDFLVEMFEETDLLLNITQHALIPEHXXXXXXXXXXXXXKYSVMEHQLPR 947
QA K ++ F E+F+ TDLL+NIT+H L P+H KY++ E+QLPR
Sbjct: 133 QALKTMELYP--FKTEIFQITDLLVNITKHVLKPKHHVLTEQEKQKLLKKYNIEENQLPR 190
Query: 946 MLESDPLAKYYGLRRGKVIKLVYSGDVTGDQTTYRCIW 833
+ D +A+YYGL +G+V+K+ Y+GD+T TYRCIW
Sbjct: 191 LSRKDAIAQYYGLEKGQVVKVTYTGDITESHVTYRCIW 228