BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00007746
         (2061 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]              392   e-106
ref|XP_006644254.1| PREDICTED: pre-mRNA-processing protein 40A-l...   372   e-100
ref|XP_006644253.1| PREDICTED: pre-mRNA-processing protein 40A-l...   372   e-100
ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-l...   367   8e-99
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   366   2e-98
ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-l...   365   5e-98
ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-l...   365   5e-98
ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-l...   365   5e-98
gb|EOY15668.1| Pre-mRNA-processing protein 40A isoform 8 [Theobr...   363   1e-97
gb|EOY15667.1| Pre-mRNA-processing protein 40A isoform 7 [Theobr...   363   1e-97
gb|EOY15666.1| Pre-mRNA-processing protein 40A isoform 6 [Theobr...   363   1e-97
gb|EOY15665.1| Pre-mRNA-processing protein 40A isoform 5 [Theobr...   363   1e-97
gb|EOY15664.1| Pre-mRNA-processing protein 40A isoform 4 [Theobr...   363   1e-97
gb|EOY15663.1| Pre-mRNA-processing protein 40A isoform 3 [Theobr...   363   1e-97
gb|EOY15661.1| Pre-mRNA-processing protein 40A isoform 1 [Theobr...   363   1e-97
gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Mor...   358   6e-96
ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-l...   356   2e-95
gb|EMJ28229.1| hypothetical protein PRUPE_ppa000697mg [Prunus pe...   351   8e-94
ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-l...   348   4e-93
ref|XP_002320019.2| FF domain-containing family protein [Populus...   343   2e-91

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  392 bits (1006), Expect = e-106
 Identities = 246/574 (42%), Positives = 308/574 (53%), Gaps = 9/574 (1%)
 Frame = -2

Query: 1697 QNFGPPLQMQFRPGMVXXXXXXXXXXXXXXFRPVGQGMAPPNMGN-APLXXXXXXXXXXX 1521
            QNFGPPL MQFRP +               FRP+GQ ++ PN+G  +             
Sbjct: 24   QNFGPPLSMQFRPAVPGQQGHPFIPAASQQFRPIGQNISSPNVGGPSGQNQPPQFSQAMQ 83

Query: 1520 XXXXXXXXXXXXXXXXXXXPMTYMQHQRXXXXXXXXXXXXXXXXQISNMXXXXXXXXXGM 1341
                               PM Y+Q  R                  S+M          M
Sbjct: 84   QLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQPNQTAPPLN-SHMPGLAGPG---M 139

Query: 1340 QVSSSYTFAAPVPYGQPQNMFNNAXXXXXXXXXXXVATSYNASQQWAPPAQNT---IQPV 1170
              SSSYTFA P  +GQPQ+  N +                   Q W      +   + PV
Sbjct: 140  PFSSSYTFA-PASFGQPQSTINASAQFQPISQMHAPV----GGQPWLSSGSQSGALVTPV 194

Query: 1169 QNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFEL 990
                QQP+    TA  P     N   Q++SDWQEHT+ DGRRYYYN+KT+ SSWEKP EL
Sbjct: 195  HQAGQQPSV---TADIPAGNVPNPTHQSSSDWQEHTSADGRRYYYNKKTRLSSWEKPLEL 251

Query: 989  MTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVSSGNS 810
            MTP ERADASTVWKEFTT EGRKYYYNK+TK SKWTIP+ELK+AREQAEK+  V     S
Sbjct: 252  MTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAEKS--VSQETQS 309

Query: 809  EMSFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIVTPKIASPATPVL-----P 645
            EM                        TASV  ++T  +T+        P TPV+     P
Sbjct: 310  EMGTTSNEPAVVAVSLAETPS-----TASVSVSSTTSSTISGMTSSPVPVTPVVAVVNPP 364

Query: 644  SNIASVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVETNSSTMLNSDKD 465
              + S TS                  S+  P     +  + +  + +  N+++M + +  
Sbjct: 365  PVVVSGTSAIPIAQSAVTTSAVGVQPSMGTPLPAAVSGSTGVAAAFINPNATSMTSFENL 424

Query: 464  SVKEEKDSEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELL 285
            S      + +  +D+EEAKK + V GK+NVTPL  EK  D+EPLVY+TK+EAKNAFK LL
Sbjct: 425  SADATNGASM--QDIEEAKKGVAVAGKINVTPLE-EKTLDDEPLVYSTKLEAKNAFKALL 481

Query: 284  ESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAK 105
            ES +VESDWTWDQAM+ IINDKRYGALKTLGE+KQAFNEYL  RKK EAEERR++QK+A+
Sbjct: 482  ESANVESDWTWDQAMKAIINDKRYGALKTLGERKQAFNEYLGQRKKIEAEERRMRQKKAR 541

Query: 104  EDFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
            E+F  MLEECKELTS  +WSK   +F++D+RF A
Sbjct: 542  EEFTTMLEECKELTSSIKWSKAVDMFQDDERFKA 575


>ref|XP_006644254.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Oryza
            brachyantha]
          Length = 865

 Score =  372 bits (956), Expect = e-100
 Identities = 201/408 (49%), Positives = 262/408 (64%), Gaps = 5/408 (1%)
 Frame = -2

Query: 1211 QQWAP-PAQNT--IQPVQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRY 1041
            Q W P P QN   + P+     QP +  +T P     + NS+  ++SDWQEHT++DG++Y
Sbjct: 26   QPWGPAPGQNVPPVAPLVQPGHQPVSSSTTLP-----SINSSEPSSSDWQEHTSNDGKKY 80

Query: 1040 YYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKM 861
            YYN+KT++SSWEKP ELMTP ERADAST WKEFTT EGRKYYYNK+TK SKWTIPDELKM
Sbjct: 81   YYNKKTRQSSWEKPAELMTPLERADASTEWKEFTTQEGRKYYYNKVTKQSKWTIPDELKM 140

Query: 860  AREQAEKAAGVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIVT 681
            ARE AEKA+       +E +                     + T S+++++T+   +   
Sbjct: 141  ARELAEKASNSRHDHETETTAGAPSGPTSNSVEPSSIPANQSSTMSIVASSTLDAAVNSV 200

Query: 680  PKIASPATPVLPSNIASVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVE 501
            P  A  +  +  ++ +S T++                     P+   T ++S    S   
Sbjct: 201  PPGAGSSHNMENTSSSSNTAMQNG-----------------GPSTVITPVISTGIPSVAS 243

Query: 500  TNSSTMLNSDKDSVKEEKDSE--INEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVY 327
                +  N++  S     D +   +  DLEEAKKTMP+ GK+NVTP+  +K ++EEP++Y
Sbjct: 244  DAGISRANNEYSSKASTADMQNGASADDLEEAKKTMPLPGKINVTPVE-DKTSEEEPVIY 302

Query: 326  ATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKK 147
            A K+EAKNAFK LLES +VESDWTWDQAMRVIINDKRYGALKTLGE+KQAFNEYL  RKK
Sbjct: 303  ANKLEAKNAFKALLESSNVESDWTWDQAMRVIINDKRYGALKTLGERKQAFNEYLNQRKK 362

Query: 146  QEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
             EAEERR++Q++A++DFL MLEECKELTS  RWSK   +FE+DKRF A
Sbjct: 363  LEAEERRVKQRKARDDFLAMLEECKELTSSTRWSKAITMFEDDKRFSA 410


>ref|XP_006644253.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Oryza
            brachyantha]
          Length = 866

 Score =  372 bits (956), Expect = e-100
 Identities = 201/408 (49%), Positives = 262/408 (64%), Gaps = 5/408 (1%)
 Frame = -2

Query: 1211 QQWAP-PAQNT--IQPVQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRY 1041
            Q W P P QN   + P+     QP +  +T P     + NS+  ++SDWQEHT++DG++Y
Sbjct: 27   QPWGPAPGQNVPPVAPLVQPGHQPVSSSTTLP-----SINSSEPSSSDWQEHTSNDGKKY 81

Query: 1040 YYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKM 861
            YYN+KT++SSWEKP ELMTP ERADAST WKEFTT EGRKYYYNK+TK SKWTIPDELKM
Sbjct: 82   YYNKKTRQSSWEKPAELMTPLERADASTEWKEFTTQEGRKYYYNKVTKQSKWTIPDELKM 141

Query: 860  AREQAEKAAGVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIVT 681
            ARE AEKA+       +E +                     + T S+++++T+   +   
Sbjct: 142  ARELAEKASNSRHDHETETTAGAPSGPTSNSVEPSSIPANQSSTMSIVASSTLDAAVNSV 201

Query: 680  PKIASPATPVLPSNIASVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVE 501
            P  A  +  +  ++ +S T++                     P+   T ++S    S   
Sbjct: 202  PPGAGSSHNMENTSSSSNTAMQNG-----------------GPSTVITPVISTGIPSVAS 244

Query: 500  TNSSTMLNSDKDSVKEEKDSE--INEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVY 327
                +  N++  S     D +   +  DLEEAKKTMP+ GK+NVTP+  +K ++EEP++Y
Sbjct: 245  DAGISRANNEYSSKASTADMQNGASADDLEEAKKTMPLPGKINVTPVE-DKTSEEEPVIY 303

Query: 326  ATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKK 147
            A K+EAKNAFK LLES +VESDWTWDQAMRVIINDKRYGALKTLGE+KQAFNEYL  RKK
Sbjct: 304  ANKLEAKNAFKALLESSNVESDWTWDQAMRVIINDKRYGALKTLGERKQAFNEYLNQRKK 363

Query: 146  QEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
             EAEERR++Q++A++DFL MLEECKELTS  RWSK   +FE+DKRF A
Sbjct: 364  LEAEERRVKQRKARDDFLAMLEECKELTSSTRWSKAITMFEDDKRFSA 411


>ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-like [Fragaria vesca
            subsp. vesca]
          Length = 990

 Score =  367 bits (943), Expect = 8e-99
 Identities = 218/461 (47%), Positives = 272/461 (59%), Gaps = 14/461 (3%)
 Frame = -2

Query: 1343 MQVSSSYTFAAPVPYGQPQNMFNNAXXXXXXXXXXXVATSYNASQQWAPPAQN---TIQP 1173
            M   SSY +A P  Y QPQN  N++                 A Q W   + +    + P
Sbjct: 98   MPYPSSYMYAQP-SYAQPQNNANSSSQFQPMSQDQAHGVP-TAGQPWMSSSSHQGAAVTP 155

Query: 1172 VQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFE 993
             Q   QQP +  +  P P     N A  ++SDWQEH A DGRRYY+NR T++SSWEKP E
Sbjct: 156  QQQPSQQPTS--TPFPDPAVNAPNLAQPSSSDWQEHMASDGRRYYFNRSTRQSSWEKPLE 213

Query: 992  LMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVSSGN 813
            LMTP ERADASTVWKE+T+++G+KYYYNK+T+ SKWTIP+ELK+AREQA++         
Sbjct: 214  LMTPLERADASTVWKEYTSADGKKYYYNKVTRESKWTIPEELKLAREQAQREH--TQGTQ 271

Query: 812  SEMSFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIVTPKIA-SPATPVLPSNI 636
            SEM+                       + S     TV + + VTP  A S  +P  PS +
Sbjct: 272  SEMTSTSHAPPATASAEIHAGASSVGPSTSSAQPGTVSSPVAVTPISAFSNPSPTTPSGL 331

Query: 635  ASVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVETNS--STMLNSDKDS 462
            +    +                   + PA      VS LP S V +    ST++N+   S
Sbjct: 332  SVAPGVQSSMATGSVG---------VQPAVVN---VSPLPASNVGSTGLPSTLVNTITKS 379

Query: 461  VKEEKDSE--------INEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAK 306
            V E +  +         + +D+EEAKK M V GKVNVTP S EKA D+EPLVYA+K EAK
Sbjct: 380  VNENQAPQDSASSIDGASSQDIEEAKKGMAVAGKVNVTP-SEEKAIDDEPLVYASKQEAK 438

Query: 305  NAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERR 126
            NAFK LLES +V SDWTW+QAMR IINDKRYGAL+TLGE+KQAFNEYL  RKK E EERR
Sbjct: 439  NAFKSLLESANVHSDWTWEQAMREIINDKRYGALRTLGERKQAFNEYLGQRKKLENEERR 498

Query: 125  IQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
            I+QKRA+E+F +MLEE KELTS  RWSK   +FEND+RF A
Sbjct: 499  IRQKRAREEFTKMLEESKELTSTIRWSKAVTMFENDERFKA 539


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
            vinifera]
          Length = 1020

 Score =  366 bits (940), Expect = 2e-98
 Identities = 217/453 (47%), Positives = 269/453 (59%), Gaps = 16/453 (3%)
 Frame = -2

Query: 1313 APVPYGQPQNMFNNAXXXXXXXXXXXVATSYNASQQWAPPAQNT---IQPVQNGQQQPAA 1143
            AP  +GQPQ+  N +                   Q W      +   + PV    QQP+ 
Sbjct: 150  APASFGQPQSTINASAQFQPISQMHAPV----GGQPWLSSGSQSGALVTPVHQAGQQPSV 205

Query: 1142 GFSTAPGPVAP--TTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFELMTPTERA 969
               TA  PV+     N   Q++SDWQEHT+ DGRRYYYN+KT+ SSWEKP ELMTP ERA
Sbjct: 206  ---TADIPVSAGNVPNPTHQSSSDWQEHTSADGRRYYYNKKTRLSSWEKPLELMTPIERA 262

Query: 968  DASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVSSGNSEMSFXXX 789
            DASTVWKEFTT EGRKYYYNK+TK SKWTIP+ELK+AREQAEK+  V     SEM     
Sbjct: 263  DASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAEKS--VSQETQSEMGTTSN 320

Query: 788  XXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIVTPKIASPATPVL-----PSNIASVT 624
                               TASV  ++T  +T+        P TPV+     P  + S T
Sbjct: 321  EPAVVAVSLAETPS-----TASVSVSSTTSSTISGMTSSPVPVTPVVAVVNPPPVVVSGT 375

Query: 623  SIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPN------STVETNSSTMLNSDKDS 462
            S                    +A +A TT+ V   P+      + V  ++    N   D+
Sbjct: 376  SAIP-----------------IAQSAVTTSAVGVQPSMGTPLPAAVSGSTGVAANLSADA 418

Query: 461  VKEEKDSEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLE 282
                  +  + +D+EEAKK + V GK+NVTPL  EK  D+EPLVY+TK+EAKNAFK LLE
Sbjct: 419  T-----NGASMQDIEEAKKGVAVAGKINVTPLE-EKTLDDEPLVYSTKLEAKNAFKALLE 472

Query: 281  SVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKE 102
            S +VESDWTWDQAM+ IINDKRYGALKTLGE+KQAFNEYL  RKK EAEERR++QK+A+E
Sbjct: 473  SANVESDWTWDQAMKAIINDKRYGALKTLGERKQAFNEYLGQRKKIEAEERRMRQKKARE 532

Query: 101  DFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
            +F  MLEECKELTS  +WSK   +F++D+RF A
Sbjct: 533  EFTTMLEECKELTSSIKWSKAVDMFQDDERFKA 565


>ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X3 [Solanum
            tuberosum]
          Length = 864

 Score =  365 bits (936), Expect = 5e-98
 Identities = 205/391 (52%), Positives = 254/391 (64%), Gaps = 8/391 (2%)
 Frame = -2

Query: 1151 PAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFELMTPTER 972
            P++   +A  P  P + ++ Q  SDWQE+ A DGRRYYYN+ TK+SSWEKP ELMTP ER
Sbjct: 173  PSSHQLSAVAPAVPASTASQQTASDWQEYEAADGRRYYYNKNTKQSSWEKPLELMTPLER 232

Query: 971  ADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVV----SSGNSEM 804
            ADASTVWKEFTT++GRKYYYNK TK SKWTIPDELK+ARE AE AAG V    +S NS +
Sbjct: 233  ADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQVVQTGTSTNSGV 292

Query: 803  SFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIV----TPKIASPATPVLPSNI 636
                                 P+ T S ++++ VP T  V    TP +    +  +PS  
Sbjct: 293  QVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVPVTPAVSDVNTPPLVVSGSSAIPSVS 352

Query: 635  ASVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVETNSSTMLNSDKDSVK 456
             +VTS                   + +PA + +T  +AL N+  +T  S + N       
Sbjct: 353  LAVTS----------------SAGVSSPAVSGSTESAALANA-YQTQMSGIENLSPQVAS 395

Query: 455  EEKDSEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLESV 276
                S  + +D+EEAKK M V GK+NV P   EK+ADEEP +YATK EAKNAFK LLES 
Sbjct: 396  SL--SGASSQDIEEAKKGMAVAGKINVVPAE-EKSADEEPFLYATKQEAKNAFKALLESA 452

Query: 275  HVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKEDF 96
            +VESDWTW+Q MRVIINDKRYGALKTLGE+KQAFNEYL  RKKQEAEERR++Q++AKE+F
Sbjct: 453  NVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEF 512

Query: 95   LRMLEECKELTSGARWSKVTPLFENDKRFLA 3
             +MLEE KELTS  RWSK   +FE+D+RF A
Sbjct: 513  TKMLEESKELTSSTRWSKAVTMFEDDERFKA 543


>ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Solanum
            tuberosum]
          Length = 872

 Score =  365 bits (936), Expect = 5e-98
 Identities = 205/391 (52%), Positives = 254/391 (64%), Gaps = 8/391 (2%)
 Frame = -2

Query: 1151 PAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFELMTPTER 972
            P++   +A  P  P + ++ Q  SDWQE+ A DGRRYYYN+ TK+SSWEKP ELMTP ER
Sbjct: 173  PSSHQLSAVAPAVPASTASQQTASDWQEYEAADGRRYYYNKNTKQSSWEKPLELMTPLER 232

Query: 971  ADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVV----SSGNSEM 804
            ADASTVWKEFTT++GRKYYYNK TK SKWTIPDELK+ARE AE AAG V    +S NS +
Sbjct: 233  ADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQVVQTGTSTNSGV 292

Query: 803  SFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIV----TPKIASPATPVLPSNI 636
                                 P+ T S ++++ VP T  V    TP +    +  +PS  
Sbjct: 293  QVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVPVTPAVSDVNTPPLVVSGSSAIPSVS 352

Query: 635  ASVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVETNSSTMLNSDKDSVK 456
             +VTS                   + +PA + +T  +AL N+  +T  S + N       
Sbjct: 353  LAVTS----------------SAGVSSPAVSGSTESAALANA-YQTQMSGIENLSPQVAS 395

Query: 455  EEKDSEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLESV 276
                S  + +D+EEAKK M V GK+NV P   EK+ADEEP +YATK EAKNAFK LLES 
Sbjct: 396  SL--SGASSQDIEEAKKGMAVAGKINVVPAE-EKSADEEPFLYATKQEAKNAFKALLESA 452

Query: 275  HVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKEDF 96
            +VESDWTW+Q MRVIINDKRYGALKTLGE+KQAFNEYL  RKKQEAEERR++Q++AKE+F
Sbjct: 453  NVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEF 512

Query: 95   LRMLEECKELTSGARWSKVTPLFENDKRFLA 3
             +MLEE KELTS  RWSK   +FE+D+RF A
Sbjct: 513  TKMLEESKELTSSTRWSKAVTMFEDDERFKA 543


>ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
            tuberosum]
          Length = 1031

 Score =  365 bits (936), Expect = 5e-98
 Identities = 205/391 (52%), Positives = 254/391 (64%), Gaps = 8/391 (2%)
 Frame = -2

Query: 1151 PAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFELMTPTER 972
            P++   +A  P  P + ++ Q  SDWQE+ A DGRRYYYN+ TK+SSWEKP ELMTP ER
Sbjct: 173  PSSHQLSAVAPAVPASTASQQTASDWQEYEAADGRRYYYNKNTKQSSWEKPLELMTPLER 232

Query: 971  ADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVV----SSGNSEM 804
            ADASTVWKEFTT++GRKYYYNK TK SKWTIPDELK+ARE AE AAG V    +S NS +
Sbjct: 233  ADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQVVQTGTSTNSGV 292

Query: 803  SFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIV----TPKIASPATPVLPSNI 636
                                 P+ T S ++++ VP T  V    TP +    +  +PS  
Sbjct: 293  QVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVPVTPAVSDVNTPPLVVSGSSAIPSVS 352

Query: 635  ASVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVETNSSTMLNSDKDSVK 456
             +VTS                   + +PA + +T  +AL N+  +T  S + N       
Sbjct: 353  LAVTS----------------SAGVSSPAVSGSTESAALANA-YQTQMSGIENLSPQVAS 395

Query: 455  EEKDSEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLESV 276
                S  + +D+EEAKK M V GK+NV P   EK+ADEEP +YATK EAKNAFK LLES 
Sbjct: 396  SL--SGASSQDIEEAKKGMAVAGKINVVPAE-EKSADEEPFLYATKQEAKNAFKALLESA 452

Query: 275  HVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKEDF 96
            +VESDWTW+Q MRVIINDKRYGALKTLGE+KQAFNEYL  RKKQEAEERR++Q++AKE+F
Sbjct: 453  NVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEF 512

Query: 95   LRMLEECKELTSGARWSKVTPLFENDKRFLA 3
             +MLEE KELTS  RWSK   +FE+D+RF A
Sbjct: 513  TKMLEESKELTSSTRWSKAVTMFEDDERFKA 543


>gb|EOY15668.1| Pre-mRNA-processing protein 40A isoform 8 [Theobroma cacao]
          Length = 789

 Score =  363 bits (933), Expect = 1e-97
 Identities = 215/453 (47%), Positives = 272/453 (60%), Gaps = 6/453 (1%)
 Frame = -2

Query: 1343 MQVSSSYTFAAPVPYGQPQNMFNNAXXXXXXXXXXXVATSYNASQQWAPPAQNTIQ---P 1173
            M  SSSY++  P  +GQPQN  + A            + +  A Q W      ++    P
Sbjct: 138  MPPSSSYSYV-PSSFGQPQNNVS-ASSQFQPTSQVHASVAPVAGQPWLSSGNQSVSLAIP 195

Query: 1172 VQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFE 993
            +Q   QQP    S      AP     P + SDWQEHT+ DGRRYYYN+KT++SSWEKP E
Sbjct: 196  IQQTGQQPPLISSADTAANAPI--HTPPSASDWQEHTSADGRRYYYNKKTRQSSWEKPLE 253

Query: 992  LMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVSSGN 813
            LMTP ERADASTVWKEFTT EGRKYYYNK+TK SKWTIP+ELK+AREQA+    VV+S  
Sbjct: 254  LMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQ----VVASQG 309

Query: 812  SEMSFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIVTPKIASPATPVLPSNIA 633
            +                         +  S  +T+   + + VTP +A+ A P  P+ ++
Sbjct: 310  APSDTGVASQAPVAGAVSSAEMPAAAIPVS-SNTSQASSPVSVTP-VAAVANPS-PTLVS 366

Query: 632  SVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVETNSSTMLNSDKDSVKE 453
              T +                   + P    ++  S  P ++V  N+ TM+ S + +  +
Sbjct: 367  GSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANT-TMIRSLESTASQ 425

Query: 452  EKDSEIN---EKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLE 282
            +     N    +D+EEAKK M   GKVNVTP+  EK  D+EPLVYA K EAKNAFK LLE
Sbjct: 426  DSVHFTNGASAQDIEEAKKGMATAGKVNVTPVE-EKVPDDEPLVYANKQEAKNAFKSLLE 484

Query: 281  SVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKE 102
            S +V+SDWTW+Q MR IINDKRYGALKTLGE+KQAFNEYL  RKK EAEERR++QK+A+E
Sbjct: 485  SANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKARE 544

Query: 101  DFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
            +F +MLEE KELTS  RWSK   LFEND+RF A
Sbjct: 545  EFTKMLEESKELTSSMRWSKAQSLFENDERFKA 577


>gb|EOY15667.1| Pre-mRNA-processing protein 40A isoform 7 [Theobroma cacao]
          Length = 787

 Score =  363 bits (933), Expect = 1e-97
 Identities = 215/453 (47%), Positives = 272/453 (60%), Gaps = 6/453 (1%)
 Frame = -2

Query: 1343 MQVSSSYTFAAPVPYGQPQNMFNNAXXXXXXXXXXXVATSYNASQQWAPPAQNTIQ---P 1173
            M  SSSY++  P  +GQPQN  + A            + +  A Q W      ++    P
Sbjct: 138  MPPSSSYSYV-PSSFGQPQNNVS-ASSQFQPTSQVHASVAPVAGQPWLSSGNQSVSLAIP 195

Query: 1172 VQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFE 993
            +Q   QQP    S      AP     P + SDWQEHT+ DGRRYYYN+KT++SSWEKP E
Sbjct: 196  IQQTGQQPPLISSADTAANAPI--HTPPSASDWQEHTSADGRRYYYNKKTRQSSWEKPLE 253

Query: 992  LMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVSSGN 813
            LMTP ERADASTVWKEFTT EGRKYYYNK+TK SKWTIP+ELK+AREQA+    VV+S  
Sbjct: 254  LMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQ----VVASQG 309

Query: 812  SEMSFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIVTPKIASPATPVLPSNIA 633
            +                         +  S  +T+   + + VTP +A+ A P  P+ ++
Sbjct: 310  APSDTGVASQAPVAGAVSSAEMPAAAIPVS-SNTSQASSPVSVTP-VAAVANPS-PTLVS 366

Query: 632  SVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVETNSSTMLNSDKDSVKE 453
              T +                   + P    ++  S  P ++V  N+ TM+ S + +  +
Sbjct: 367  GSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANT-TMIRSLESTASQ 425

Query: 452  EKDSEIN---EKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLE 282
            +     N    +D+EEAKK M   GKVNVTP+  EK  D+EPLVYA K EAKNAFK LLE
Sbjct: 426  DSVHFTNGASAQDIEEAKKGMATAGKVNVTPVE-EKVPDDEPLVYANKQEAKNAFKSLLE 484

Query: 281  SVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKE 102
            S +V+SDWTW+Q MR IINDKRYGALKTLGE+KQAFNEYL  RKK EAEERR++QK+A+E
Sbjct: 485  SANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKARE 544

Query: 101  DFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
            +F +MLEE KELTS  RWSK   LFEND+RF A
Sbjct: 545  EFTKMLEESKELTSSMRWSKAQSLFENDERFKA 577


>gb|EOY15666.1| Pre-mRNA-processing protein 40A isoform 6 [Theobroma cacao]
          Length = 774

 Score =  363 bits (933), Expect = 1e-97
 Identities = 215/453 (47%), Positives = 272/453 (60%), Gaps = 6/453 (1%)
 Frame = -2

Query: 1343 MQVSSSYTFAAPVPYGQPQNMFNNAXXXXXXXXXXXVATSYNASQQWAPPAQNTIQ---P 1173
            M  SSSY++  P  +GQPQN  + A            + +  A Q W      ++    P
Sbjct: 138  MPPSSSYSYV-PSSFGQPQNNVS-ASSQFQPTSQVHASVAPVAGQPWLSSGNQSVSLAIP 195

Query: 1172 VQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFE 993
            +Q   QQP    S      AP     P + SDWQEHT+ DGRRYYYN+KT++SSWEKP E
Sbjct: 196  IQQTGQQPPLISSADTAANAPI--HTPPSASDWQEHTSADGRRYYYNKKTRQSSWEKPLE 253

Query: 992  LMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVSSGN 813
            LMTP ERADASTVWKEFTT EGRKYYYNK+TK SKWTIP+ELK+AREQA+    VV+S  
Sbjct: 254  LMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQ----VVASQG 309

Query: 812  SEMSFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIVTPKIASPATPVLPSNIA 633
            +                         +  S  +T+   + + VTP +A+ A P  P+ ++
Sbjct: 310  APSDTGVASQAPVAGAVSSAEMPAAAIPVS-SNTSQASSPVSVTP-VAAVANPS-PTLVS 366

Query: 632  SVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVETNSSTMLNSDKDSVKE 453
              T +                   + P    ++  S  P ++V  N+ TM+ S + +  +
Sbjct: 367  GSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANT-TMIRSLESTASQ 425

Query: 452  EKDSEIN---EKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLE 282
            +     N    +D+EEAKK M   GKVNVTP+  EK  D+EPLVYA K EAKNAFK LLE
Sbjct: 426  DSVHFTNGASAQDIEEAKKGMATAGKVNVTPVE-EKVPDDEPLVYANKQEAKNAFKSLLE 484

Query: 281  SVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKE 102
            S +V+SDWTW+Q MR IINDKRYGALKTLGE+KQAFNEYL  RKK EAEERR++QK+A+E
Sbjct: 485  SANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKARE 544

Query: 101  DFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
            +F +MLEE KELTS  RWSK   LFEND+RF A
Sbjct: 545  EFTKMLEESKELTSSMRWSKAQSLFENDERFKA 577


>gb|EOY15665.1| Pre-mRNA-processing protein 40A isoform 5 [Theobroma cacao]
          Length = 904

 Score =  363 bits (933), Expect = 1e-97
 Identities = 215/453 (47%), Positives = 272/453 (60%), Gaps = 6/453 (1%)
 Frame = -2

Query: 1343 MQVSSSYTFAAPVPYGQPQNMFNNAXXXXXXXXXXXVATSYNASQQWAPPAQNTIQ---P 1173
            M  SSSY++  P  +GQPQN  + A            + +  A Q W      ++    P
Sbjct: 138  MPPSSSYSYV-PSSFGQPQNNVS-ASSQFQPTSQVHASVAPVAGQPWLSSGNQSVSLAIP 195

Query: 1172 VQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFE 993
            +Q   QQP    S      AP     P + SDWQEHT+ DGRRYYYN+KT++SSWEKP E
Sbjct: 196  IQQTGQQPPLISSADTAANAPI--HTPPSASDWQEHTSADGRRYYYNKKTRQSSWEKPLE 253

Query: 992  LMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVSSGN 813
            LMTP ERADASTVWKEFTT EGRKYYYNK+TK SKWTIP+ELK+AREQA+    VV+S  
Sbjct: 254  LMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQ----VVASQG 309

Query: 812  SEMSFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIVTPKIASPATPVLPSNIA 633
            +                         +  S  +T+   + + VTP +A+ A P  P+ ++
Sbjct: 310  APSDTGVASQAPVAGAVSSAEMPAAAIPVS-SNTSQASSPVSVTP-VAAVANPS-PTLVS 366

Query: 632  SVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVETNSSTMLNSDKDSVKE 453
              T +                   + P    ++  S  P ++V  N+ TM+ S + +  +
Sbjct: 367  GSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANT-TMIRSLESTASQ 425

Query: 452  EKDSEIN---EKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLE 282
            +     N    +D+EEAKK M   GKVNVTP+  EK  D+EPLVYA K EAKNAFK LLE
Sbjct: 426  DSVHFTNGASAQDIEEAKKGMATAGKVNVTPVE-EKVPDDEPLVYANKQEAKNAFKSLLE 484

Query: 281  SVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKE 102
            S +V+SDWTW+Q MR IINDKRYGALKTLGE+KQAFNEYL  RKK EAEERR++QK+A+E
Sbjct: 485  SANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKARE 544

Query: 101  DFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
            +F +MLEE KELTS  RWSK   LFEND+RF A
Sbjct: 545  EFTKMLEESKELTSSMRWSKAQSLFENDERFKA 577


>gb|EOY15664.1| Pre-mRNA-processing protein 40A isoform 4 [Theobroma cacao]
          Length = 844

 Score =  363 bits (933), Expect = 1e-97
 Identities = 215/453 (47%), Positives = 272/453 (60%), Gaps = 6/453 (1%)
 Frame = -2

Query: 1343 MQVSSSYTFAAPVPYGQPQNMFNNAXXXXXXXXXXXVATSYNASQQWAPPAQNTIQ---P 1173
            M  SSSY++  P  +GQPQN  + A            + +  A Q W      ++    P
Sbjct: 138  MPPSSSYSYV-PSSFGQPQNNVS-ASSQFQPTSQVHASVAPVAGQPWLSSGNQSVSLAIP 195

Query: 1172 VQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFE 993
            +Q   QQP    S      AP     P + SDWQEHT+ DGRRYYYN+KT++SSWEKP E
Sbjct: 196  IQQTGQQPPLISSADTAANAPI--HTPPSASDWQEHTSADGRRYYYNKKTRQSSWEKPLE 253

Query: 992  LMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVSSGN 813
            LMTP ERADASTVWKEFTT EGRKYYYNK+TK SKWTIP+ELK+AREQA+    VV+S  
Sbjct: 254  LMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQ----VVASQG 309

Query: 812  SEMSFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIVTPKIASPATPVLPSNIA 633
            +                         +  S  +T+   + + VTP +A+ A P  P+ ++
Sbjct: 310  APSDTGVASQAPVAGAVSSAEMPAAAIPVS-SNTSQASSPVSVTP-VAAVANPS-PTLVS 366

Query: 632  SVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVETNSSTMLNSDKDSVKE 453
              T +                   + P    ++  S  P ++V  N+ TM+ S + +  +
Sbjct: 367  GSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANT-TMIRSLESTASQ 425

Query: 452  EKDSEIN---EKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLE 282
            +     N    +D+EEAKK M   GKVNVTP+  EK  D+EPLVYA K EAKNAFK LLE
Sbjct: 426  DSVHFTNGASAQDIEEAKKGMATAGKVNVTPVE-EKVPDDEPLVYANKQEAKNAFKSLLE 484

Query: 281  SVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKE 102
            S +V+SDWTW+Q MR IINDKRYGALKTLGE+KQAFNEYL  RKK EAEERR++QK+A+E
Sbjct: 485  SANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKARE 544

Query: 101  DFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
            +F +MLEE KELTS  RWSK   LFEND+RF A
Sbjct: 545  EFTKMLEESKELTSSMRWSKAQSLFENDERFKA 577


>gb|EOY15663.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
          Length = 1041

 Score =  363 bits (933), Expect = 1e-97
 Identities = 215/453 (47%), Positives = 272/453 (60%), Gaps = 6/453 (1%)
 Frame = -2

Query: 1343 MQVSSSYTFAAPVPYGQPQNMFNNAXXXXXXXXXXXVATSYNASQQWAPPAQNTIQ---P 1173
            M  SSSY++  P  +GQPQN  + A            + +  A Q W      ++    P
Sbjct: 138  MPPSSSYSYV-PSSFGQPQNNVS-ASSQFQPTSQVHASVAPVAGQPWLSSGNQSVSLAIP 195

Query: 1172 VQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFE 993
            +Q   QQP    S      AP     P + SDWQEHT+ DGRRYYYN+KT++SSWEKP E
Sbjct: 196  IQQTGQQPPLISSADTAANAPI--HTPPSASDWQEHTSADGRRYYYNKKTRQSSWEKPLE 253

Query: 992  LMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVSSGN 813
            LMTP ERADASTVWKEFTT EGRKYYYNK+TK SKWTIP+ELK+AREQA+    VV+S  
Sbjct: 254  LMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQ----VVASQG 309

Query: 812  SEMSFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIVTPKIASPATPVLPSNIA 633
            +                         +  S  +T+   + + VTP +A+ A P  P+ ++
Sbjct: 310  APSDTGVASQAPVAGAVSSAEMPAAAIPVS-SNTSQASSPVSVTP-VAAVANPS-PTLVS 366

Query: 632  SVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVETNSSTMLNSDKDSVKE 453
              T +                   + P    ++  S  P ++V  N+ TM+ S + +  +
Sbjct: 367  GSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANT-TMIRSLESTASQ 425

Query: 452  EKDSEIN---EKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLE 282
            +     N    +D+EEAKK M   GKVNVTP+  EK  D+EPLVYA K EAKNAFK LLE
Sbjct: 426  DSVHFTNGASAQDIEEAKKGMATAGKVNVTPVE-EKVPDDEPLVYANKQEAKNAFKSLLE 484

Query: 281  SVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKE 102
            S +V+SDWTW+Q MR IINDKRYGALKTLGE+KQAFNEYL  RKK EAEERR++QK+A+E
Sbjct: 485  SANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKARE 544

Query: 101  DFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
            +F +MLEE KELTS  RWSK   LFEND+RF A
Sbjct: 545  EFTKMLEESKELTSSMRWSKAQSLFENDERFKA 577


>gb|EOY15661.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
            gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
            40A isoform 1 [Theobroma cacao]
          Length = 1032

 Score =  363 bits (933), Expect = 1e-97
 Identities = 215/453 (47%), Positives = 272/453 (60%), Gaps = 6/453 (1%)
 Frame = -2

Query: 1343 MQVSSSYTFAAPVPYGQPQNMFNNAXXXXXXXXXXXVATSYNASQQWAPPAQNTIQ---P 1173
            M  SSSY++  P  +GQPQN  + A            + +  A Q W      ++    P
Sbjct: 138  MPPSSSYSYV-PSSFGQPQNNVS-ASSQFQPTSQVHASVAPVAGQPWLSSGNQSVSLAIP 195

Query: 1172 VQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFE 993
            +Q   QQP    S      AP     P + SDWQEHT+ DGRRYYYN+KT++SSWEKP E
Sbjct: 196  IQQTGQQPPLISSADTAANAPI--HTPPSASDWQEHTSADGRRYYYNKKTRQSSWEKPLE 253

Query: 992  LMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVSSGN 813
            LMTP ERADASTVWKEFTT EGRKYYYNK+TK SKWTIP+ELK+AREQA+    VV+S  
Sbjct: 254  LMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQ----VVASQG 309

Query: 812  SEMSFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIVTPKIASPATPVLPSNIA 633
            +                         +  S  +T+   + + VTP +A+ A P  P+ ++
Sbjct: 310  APSDTGVASQAPVAGAVSSAEMPAAAIPVS-SNTSQASSPVSVTP-VAAVANPS-PTLVS 366

Query: 632  SVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVETNSSTMLNSDKDSVKE 453
              T +                   + P    ++  S  P ++V  N+ TM+ S + +  +
Sbjct: 367  GSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANT-TMIRSLESTASQ 425

Query: 452  EKDSEIN---EKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFKELLE 282
            +     N    +D+EEAKK M   GKVNVTP+  EK  D+EPLVYA K EAKNAFK LLE
Sbjct: 426  DSVHFTNGASAQDIEEAKKGMATAGKVNVTPVE-EKVPDDEPLVYANKQEAKNAFKSLLE 484

Query: 281  SVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKE 102
            S +V+SDWTW+Q MR IINDKRYGALKTLGE+KQAFNEYL  RKK EAEERR++QK+A+E
Sbjct: 485  SANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKARE 544

Query: 101  DFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
            +F +MLEE KELTS  RWSK   LFEND+RF A
Sbjct: 545  EFTKMLEESKELTSSMRWSKAQSLFENDERFKA 577


>gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Morus notabilis]
          Length = 994

 Score =  358 bits (918), Expect = 6e-96
 Identities = 215/463 (46%), Positives = 273/463 (58%), Gaps = 16/463 (3%)
 Frame = -2

Query: 1343 MQVSSSYTFAAPVPYGQPQNMFNNAXXXXXXXXXXXVATSYNASQQWAPPAQNTIQPVQN 1164
            M  SSSY++A P  + QPQN  ++              T+    Q W     ++  PV  
Sbjct: 99   MPFSSSYSYA-PSSFVQPQNNASSVSQFQQMSQMQAP-TAPGPGQPWLSSGIHSAPPVAP 156

Query: 1163 GQQ---QPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPFE 993
            GQQ    P+A  S       P+T    Q++SDWQEHT+ DGRRYYYN++TK+S W+KP E
Sbjct: 157  GQQVGQPPSAASSADAATNVPSTTQ--QSSSDWQEHTSSDGRRYYYNKRTKQSVWDKPVE 214

Query: 992  LMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAA------- 834
            LMTP ERADASTVWKE+++ +GRKYYYNK+TK SKWTIP+ELK+AREQA+K +       
Sbjct: 215  LMTPIERADASTVWKEYSSPDGRKYYYNKVTKQSKWTIPEELKLAREQAQKESSQGMQSE 274

Query: 833  ------GVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIVTPKI 672
                  G V+ G+SEM                      +   +V   A++PN+ +     
Sbjct: 275  TGLASHGPVAVGSSEMP---SAGTPVASGAPLVATGVASSPVAVTPVASLPNSSMTIS-- 329

Query: 671  ASPATPVLPSNIASVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVETNS 492
             S ATP   S +AS  ++                   L PA + +T VS    +   T  
Sbjct: 330  GSSATPGSQSAVASAVAVQPPMVTVTP----------LNPAISGSTGVSPALGNANTTPV 379

Query: 491  STMLNSDKDSVKEEKDSEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKME 312
             T  N     +    D   +  D+EEAKK M V GK+NVTP+  EK  D+EPLV+A K E
Sbjct: 380  RTYDNRVSQDIASSVDGA-SILDIEEAKKGMAVAGKINVTPVE-EKPVDDEPLVFANKQE 437

Query: 311  AKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEE 132
            AKNAFK LLES +V+SDWTW+QAMR IINDKRYGALKTLGE+KQAFNEYL  RKK EAEE
Sbjct: 438  AKNAFKSLLESANVQSDWTWEQAMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEE 497

Query: 131  RRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
            RR++QK+A+E+F  MLEE KELTS  RWSK   +FEND+RF A
Sbjct: 498  RRMRQKKAREEFTIMLEESKELTSSTRWSKAVSMFENDERFKA 540


>ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-like [Solanum
            lycopersicum]
          Length = 998

 Score =  356 bits (913), Expect = 2e-95
 Identities = 208/424 (49%), Positives = 258/424 (60%), Gaps = 17/424 (4%)
 Frame = -2

Query: 1229 TSYNASQQWAPPAQNTIQP-VQNGQQQPAAGFSTAPG--------PVAPTTNSAPQNTSD 1077
            T  ++SQ   P      QP + +G Q    G  T P         P  P + ++ Q  SD
Sbjct: 138  TVQSSSQMHGPTFPAGGQPWLSSGSQTTPVGDPTPPSSHQLLAVAPAVPASTASQQTASD 197

Query: 1076 WQEHTAHDGRRYYYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTK 897
            WQE+ A DGRRYYYN+ TK+SSWEKP ELMTP ERADASTVWKEFTT++GRKYYYNK TK
Sbjct: 198  WQEYEAADGRRYYYNKNTKQSSWEKPLELMTPLERADASTVWKEFTTADGRKYYYNKETK 257

Query: 896  VSKWTIPDELKMAREQAEKAAGVV----SSGNSEMSFXXXXXXXXXXXXXXXXXXXPNLT 729
             SKWT+PDELK+ARE AE  A  V    +S NS +                     P+ T
Sbjct: 258  QSKWTMPDELKLARELAENVASQVVQTGTSTNSGVQVSEAVTSTEQPSAVTPVSSTPSST 317

Query: 728  ASVMSTATVPNTLIV----TPKIASPATPVLPSNIASVTSIXXXXXXXXXXXXXXXXXSL 561
             S + ++ VP T  V    TP +    +  +P+   +VTS                   +
Sbjct: 318  VSGVPSSPVPVTPAVSDVNTPPLVVSGSSAIPTVSFAVTS----------------SAGI 361

Query: 560  LAPAATTTTIVSALPNSTVETNSSTMLNSDKDSVKEEKDSEINEKDLEEAKKTMPVTGKV 381
             +PA +  T  +AL N+  +T  S + N           S  + +D+EEAKK M V GK+
Sbjct: 362  SSPAVSGNTRSAALANA-YQTQMSGIENLSPQVASSL--SGASSQDIEEAKKGMAVAGKI 418

Query: 380  NVTPLSVEKAADEEPLVYATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALK 201
            NV P   EK+ADEEP +YATK EAK+AFK LLES  VESDWTW+Q MRVIINDKRYGALK
Sbjct: 419  NVVPAE-EKSADEEPFLYATKQEAKHAFKSLLESATVESDWTWEQTMRVIINDKRYGALK 477

Query: 200  TLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFEN 21
            TLGE+KQAFNEYL  RKKQEAEERR++Q++AKE+F +MLEE KELTS  RWSK   +FE+
Sbjct: 478  TLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEFTKMLEESKELTSSTRWSKAVTMFED 537

Query: 20   DKRF 9
            D+RF
Sbjct: 538  DERF 541


>gb|EMJ28229.1| hypothetical protein PRUPE_ppa000697mg [Prunus persica]
          Length = 1031

 Score =  351 bits (900), Expect = 8e-94
 Identities = 208/457 (45%), Positives = 269/457 (58%), Gaps = 10/457 (2%)
 Frame = -2

Query: 1343 MQVSSSYTFAAPVPYGQPQNMFNNAXXXXXXXXXXXVATSYNASQQWAPPA-QNTIQPV- 1170
            M  SSSY FA P  Y QPQN  +++             +     Q W     Q    P  
Sbjct: 138  MPYSSSYIFAPP-SYAQPQNNVSSSSQFQPISQVQAHVSV--TGQPWVSSGNQGAAVPTP 194

Query: 1169 --QNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEKPF 996
              Q+GQQ  +  F+ +   V   T    Q++SDWQEHT+ DGRRYY+NR+TK+SSWEKP 
Sbjct: 195  VPQSGQQPSSTTFTDSAVNVPSQTQ---QSSSDWQEHTSGDGRRYYFNRRTKQSSWEKPL 251

Query: 995  ELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVSSG 816
            ELMTP ERADASTVWKE+T+S+G+KYYYNK+T+ SKWTIP+ELK+AREQA++     +  
Sbjct: 252  ELMTPMERADASTVWKEYTSSDGKKYYYNKVTRESKWTIPEELKLAREQAQRELAQGTRS 311

Query: 815  NSEMSFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPNTLIVTPKIASPATPVLPSNI 636
               ++                    P+ ++++    + P  +I     ++P+ P+ P+  
Sbjct: 312  EMNLTSHAPPAVASAETPMGSSSVGPSTSSALPGMVSSPVAVIPVSSFSNPS-PIAPTG- 369

Query: 635  ASVTSIXXXXXXXXXXXXXXXXXSLLAPAATT------TTIVSALPNSTVETNSSTMLNS 474
            +SV S                      PA+ +       T+V+A+  S      ST  N 
Sbjct: 370  SSVASGAQSSITGGVGIQPPVVTVTPPPASVSGSTGVPPTLVNAITKSV-----STFENV 424

Query: 473  DKDSVKEEKDSEINEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKMEAKNAFK 294
                +    D    + D+EEAK+ M V GKVNVTP S EK  DEEPLVYA+K EAKNAFK
Sbjct: 425  TSQDIGSADDGAFTQ-DIEEAKRGMAVAGKVNVTP-SEEKTVDEEPLVYASKQEAKNAFK 482

Query: 293  ELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEERRIQQK 114
             LLES +V SDWTW+Q MR IINDKRYGALKTLGE+KQAFNEYL  RKK E EERR++QK
Sbjct: 483  ALLESANVHSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLENEERRMRQK 542

Query: 113  RAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
            +A+E+F +MLEE KEL S  RWSK   +FEND+RF A
Sbjct: 543  KAREEFSKMLEESKELMSATRWSKAVSMFENDERFKA 579


>ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 985

 Score =  348 bits (894), Expect = 4e-93
 Identities = 198/426 (46%), Positives = 261/426 (61%), Gaps = 18/426 (4%)
 Frame = -2

Query: 1226 SYNASQQWAPPAQNT---IQPVQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAH 1056
            S   SQ W   A  T   + P+    Q  +   +  P   AP  N   Q +SDWQEH + 
Sbjct: 135  SVGNSQPWLSSASQTTNLVSPIDQANQHSSVS-AVNPAANAPVFNQ--QLSSDWQEHASA 191

Query: 1055 DGRRYYYNRKTKESSWEKPFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIP 876
            DGRRYYYN+KTK+SSWEKP ELMTP ERADASTVWKEFT  +GRKYYYNK+TK SKWT+P
Sbjct: 192  DGRRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTAPDGRKYYYNKVTKESKWTMP 251

Query: 875  DELKMAREQAEKAAGVVSSGNSEMSFXXXXXXXXXXXXXXXXXXXPNLTASVMSTATVPN 696
            +ELK+AREQA+K A   +  +  +                      N + S   +    +
Sbjct: 252  EELKLAREQAQKEATQGTQTDISVMAPQPTLAAGLSHAETPAISSVNSSISPTVSGVATS 311

Query: 695  TLIVTPKIASPATP-VLPSNIASVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSAL 519
             + VTP ++   +P V+ +  +++T                       P A+TT++   +
Sbjct: 312  PVPVTPFVSVSNSPSVMVTGSSAITG---------------------TPIASTTSVSGTV 350

Query: 518  ------------PNSTVETNSSTMLNSDKDSVKEEKDSE--INEKDLEEAKKTMPVTGKV 381
                        P + V  N+S++   +  + ++ K++    + +D+EEA+K M V GKV
Sbjct: 351  SSQSVAASGGTGPPAVVHANASSVTPFESLASQDVKNTVDGTSTEDIEEARKGMAVAGKV 410

Query: 380  NVTPLSVEKAADEEPLVYATKMEAKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALK 201
            N T L  EK+AD+EPLV+A K EAKNAFK LLESV+V+SDWTW+QAMR IINDKRYGALK
Sbjct: 411  NETVLE-EKSADDEPLVFANKQEAKNAFKALLESVNVQSDWTWEQAMREIINDKRYGALK 469

Query: 200  TLGEKKQAFNEYLTHRKKQEAEERRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFEN 21
            TLGE+KQAF+EYL HRKK +AEERRI+QK+A+E+F +MLEE KELTS  RWSK   +FEN
Sbjct: 470  TLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFTKMLEESKELTSSTRWSKAVSMFEN 529

Query: 20   DKRFLA 3
            D+RF A
Sbjct: 530  DERFKA 535


>ref|XP_002320019.2| FF domain-containing family protein [Populus trichocarpa]
            gi|550323102|gb|EEE98334.2| FF domain-containing family
            protein [Populus trichocarpa]
          Length = 1019

 Score =  343 bits (879), Expect = 2e-91
 Identities = 193/403 (47%), Positives = 251/403 (62%), Gaps = 10/403 (2%)
 Frame = -2

Query: 1181 IQPVQNGQQQPAAGFSTAPGPVAPTTNSAPQNTSDWQEHTAHDGRRYYYNRKTKESSWEK 1002
            + PVQ    QP+   S++   VA ++NS  Q+ SDWQEHTA DGRRYYYNR+TK+SSW+K
Sbjct: 168  VPPVQPAVVQPSIS-SSSDSTVAVSSNSQ-QSLSDWQEHTASDGRRYYYNRRTKQSSWDK 225

Query: 1001 PFELMTPTERADASTVWKEFTTSEGRKYYYNKLTKVSKWTIPDELKMAREQAEKAAGVVS 822
            PFELMTP ERADASTVWKEFTT EG+KYYYNK+TK SKW+IP+ELKMAREQA++  G  +
Sbjct: 226  PFELMTPIERADASTVWKEFTTQEGKKYYYNKVTKQSKWSIPEELKMAREQAQQTVGQGN 285

Query: 821  SGNSEMSFXXXXXXXXXXXXXXXXXXXPNLTASVM----STATVPNTLIVTPK----IAS 666
               ++ +                     + ++SVM    S++ +  T +  P       S
Sbjct: 286  QSETDAASNVPTAVAVTSSETSTTAVSVS-SSSVMLPGVSSSPISVTAVANPPPVVVSGS 344

Query: 665  PATPVLPSNIASVTSIXXXXXXXXXXXXXXXXXSLLAPAATTTTIVSALPNSTVETNSST 486
            PA PV  S  AS   +                   + P  T  ++ +  P + V+  +++
Sbjct: 345  PALPVAHSTTASAVGVQPS----------------VTPLPTAVSVGTGAPAAAVDAKTTS 388

Query: 485  MLNSDKDSVKEEKDSE--INEKDLEEAKKTMPVTGKVNVTPLSVEKAADEEPLVYATKME 312
            + + D    +   +S    +  D  E  K     GK N +PL  EK  DEEPLV+A K+E
Sbjct: 389  LSSIDNLLSQSAANSVDGASMMDTAEFNKVSMDMGKTNASPLE-EKTPDEEPLVFANKLE 447

Query: 311  AKNAFKELLESVHVESDWTWDQAMRVIINDKRYGALKTLGEKKQAFNEYLTHRKKQEAEE 132
            AKNAFK LLES +V+SDWTW+Q MR IINDKRY ALKTLGE+KQAFNEYL  RKK EAEE
Sbjct: 448  AKNAFKALLESANVQSDWTWEQTMREIINDKRYAALKTLGERKQAFNEYLGQRKKLEAEE 507

Query: 131  RRIQQKRAKEDFLRMLEECKELTSGARWSKVTPLFENDKRFLA 3
            RR++QK+A+E+F +MLEE KELTS  +WSK   LFEND+R+ A
Sbjct: 508  RRVRQKKAREEFAKMLEESKELTSSMKWSKAISLFENDERYKA 550