BLASTX nr result

ID: Ephedra26_contig00007460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00007460
         (820 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004783299.1| PREDICTED: serine/arginine-rich splicing fac...    59   3e-06
ref|XP_006776543.1| PREDICTED: serine/arginine-rich splicing fac...    58   4e-06
ref|XP_006776542.1| PREDICTED: serine/arginine-rich splicing fac...    58   4e-06
ref|XP_006097376.1| PREDICTED: serine/arginine-rich splicing fac...    58   4e-06
ref|XP_005875141.1| PREDICTED: LOW QUALITY PROTEIN: serine/argin...    58   4e-06
gb|EPQ13221.1| Serine/arginine-rich splicing factor 4 [Myotis br...    58   4e-06
ref|XP_004425909.1| PREDICTED: serine/arginine-rich splicing fac...    58   4e-06
ref|XP_004783297.1| PREDICTED: serine/arginine-rich splicing fac...    57   8e-06
ref|XP_004741035.1| PREDICTED: serine/arginine-rich splicing fac...    57   8e-06

>ref|XP_004783299.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform X3
           [Mustela putorius furo]
          Length = 500

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
 Frame = -3

Query: 818 RERQSKYGDSVMHGDQRRDSHRYSEREVNGKHRRSKSPSRTRTDKEVRRNGSKSPGKEVD 639
           R R S+   S   G  +    +   R  +G H RSKS SR+++    ++  S+SP K+  
Sbjct: 197 RSRHSRKSRS-RSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRSRSKKEKSRSPSKDDK 255

Query: 638 RIGRLNILEYLPGES---------NRDGVGRS-----SRHQSKDRMRSKSPERDMDVYKS 501
              R    +    +S         N DG G+S     SRH+SK + RS+SPER ++  ++
Sbjct: 256 SRSRSRSADKRRSKSKDQAEEKVQNSDGAGKSKSRSPSRHKSKSKSRSRSPERRVEEKRA 315

Query: 500 KNNHEMGSRSRDKELRRSRD 441
                  SRSR KE  RS+D
Sbjct: 316 S-----VSRSRSKEKSRSQD 330


>ref|XP_006776543.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform X2
           [Myotis davidii]
          Length = 500

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
 Frame = -3

Query: 818 RERQSKYGDSVMHGDQRRDSHRYSEREVNGKHRRSKSPSRTRTDKEVRRNGSKSPGKEVD 639
           R R S+   S   G  +    +   R  +G H RSKS SR+++    ++  S+SP K+  
Sbjct: 197 RSRHSRKSRS-RSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRSRSKKEKSRSPSKDDK 255

Query: 638 RIGRLNILEYLPGES---------NRDGVGRS-----SRHQSKDRMRSKSPERDMDVYKS 501
              R    +    +S         N D   +S     SRH+SK + RS+S ER ++  K 
Sbjct: 256 SRSRSRSADKRRSKSKDQVEEKIQNNDNTRKSKSRSPSRHKSKSKSRSRSQERRVEEEKR 315

Query: 500 KNNHEMGSRSRDKELRRSR 444
           ++  +  SRS++K LRRSR
Sbjct: 316 RSKSKEKSRSQEKGLRRSR 334


>ref|XP_006776542.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform X1
           [Myotis davidii]
          Length = 447

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
 Frame = -3

Query: 818 RERQSKYGDSVMHGDQRRDSHRYSEREVNGKHRRSKSPSRTRTDKEVRRNGSKSPGKEVD 639
           R R S+   S   G  +    +   R  +G H RSKS SR+++    ++  S+SP K+  
Sbjct: 144 RSRHSRKSRS-RSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRSRSKKEKSRSPSKDDK 202

Query: 638 RIGRLNILEYLPGES---------NRDGVGRS-----SRHQSKDRMRSKSPERDMDVYKS 501
              R    +    +S         N D   +S     SRH+SK + RS+S ER ++  K 
Sbjct: 203 SRSRSRSADKRRSKSKDQVEEKIQNNDNTRKSKSRSPSRHKSKSKSRSRSQERRVEEEKR 262

Query: 500 KNNHEMGSRSRDKELRRSR 444
           ++  +  SRS++K LRRSR
Sbjct: 263 RSKSKEKSRSQEKGLRRSR 281


>ref|XP_006097376.1| PREDICTED: serine/arginine-rich splicing factor 4 [Myotis
           lucifugus]
          Length = 662

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
 Frame = -3

Query: 818 RERQSKYGDSVMHGDQRRDSHRYSEREVNGKHRRSKSPSRTRTDKEVRRNGSKSPGKEVD 639
           R R S+   S   G  +    +   R  +G H RSKS SR+++    ++  S+SP K+  
Sbjct: 357 RSRHSRKSRS-RSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRSRSKKEKSRSPSKDDK 415

Query: 638 RIGRLNILEYLPGES---------NRDGVGRS-----SRHQSKDRMRSKSPERDMDVYKS 501
              R    +    +S         N D   +S     SRH+SK + RS+S ER ++  K 
Sbjct: 416 SRSRSRSADKRRSKSKDQVEEKIQNNDNTRKSKSRSPSRHKSKSKSRSRSQERRVEEEKR 475

Query: 500 KNNHEMGSRSRDKELRRSR 444
           ++  +  SRS++K LRRSR
Sbjct: 476 RSKSKEKSRSQEKGLRRSR 494


>ref|XP_005875141.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
           factor 4 [Myotis brandtii]
          Length = 506

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
 Frame = -3

Query: 818 RERQSKYGDSVMHGDQRRDSHRYSEREVNGKHRRSKSPSRTRTDKEVRRNGSKSPGKEVD 639
           R R S+   S   G  +    +   R  +G H RSKS SR+++    ++  S+SP K+  
Sbjct: 197 RSRHSRKSRS-RSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRSRSKKEKSRSPSKDDK 255

Query: 638 RIGRLNILEYLPGES---------NRDGVGRS-----SRHQSKDRMRSKSPERDMDVYKS 501
              R    +    +S         N D   +S     SRH+SK + RS+S ER ++  K 
Sbjct: 256 SRSRSRSADKRRSKSKDQVEEKIQNNDNTRKSKSRSPSRHKSKSKSRSRSQERRVEEEKR 315

Query: 500 KNNHEMGSRSRDKELRRSR 444
           ++  +  SRS++K LRRSR
Sbjct: 316 RSKSKEKSRSQEKGLRRSR 334


>gb|EPQ13221.1| Serine/arginine-rich splicing factor 4 [Myotis brandtii]
          Length = 485

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
 Frame = -3

Query: 818 RERQSKYGDSVMHGDQRRDSHRYSEREVNGKHRRSKSPSRTRTDKEVRRNGSKSPGKEVD 639
           R R S+   S   G  +    +   R  +G H RSKS SR+++    ++  S+SP K+  
Sbjct: 176 RSRHSRKSRS-RSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRSRSKKEKSRSPSKDDK 234

Query: 638 RIGRLNILEYLPGES---------NRDGVGRS-----SRHQSKDRMRSKSPERDMDVYKS 501
              R    +    +S         N D   +S     SRH+SK + RS+S ER ++  K 
Sbjct: 235 SRSRSRSADKRRSKSKDQVEEKIQNNDNTRKSKSRSPSRHKSKSKSRSRSQERRVEEEKR 294

Query: 500 KNNHEMGSRSRDKELRRSR 444
           ++  +  SRS++K LRRSR
Sbjct: 295 RSKSKEKSRSQEKGLRRSR 313


>ref|XP_004425909.1| PREDICTED: serine/arginine-rich splicing factor 4 [Ceratotherium
           simum simum]
          Length = 493

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
 Frame = -3

Query: 818 RERQSKYGDSVMHGDQRRDSHRYSEREVNGKHRRSKSPSRTRTDKEVRRNGSKSPGKEVD 639
           R R S+   S   G  +    +   R  +G H RSKS SR+++    ++  S+SP K+  
Sbjct: 197 RSRHSRKSRS-RSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRSRSKKEKSRSPSKDDK 255

Query: 638 RIGRLNILEYLPGES---------NRDGVGRS-----SRHQSKDRMRSKSPERDMDVYKS 501
              R    +    +S         N D  G+S     SRH+SK + RS+SPER ++  + 
Sbjct: 256 SRSRSRSADKRRSKSKEQAEEKIQNSDNTGKSKSRSPSRHKSKSKSRSRSPERRVE--EQ 313

Query: 500 KNNHEMGSRSRDKELRRSR 444
           K      SRS++K L RSR
Sbjct: 314 KQGSVSRSRSQEKSLHRSR 332


>ref|XP_004783297.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform X1
           [Mustela putorius furo]
          Length = 516

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
 Frame = -3

Query: 818 RERQSKYGDSVMHGDQRRDSHRYSEREVNGKHRRSKSPSRTRTDKEVRRNGSKSPGKEVD 639
           R R S+   S   G  +    +   R  +G H RSKS SR+++    ++  S+SP K+  
Sbjct: 197 RSRHSRKSRS-RSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRSRSKKEKSRSPSKDDK 255

Query: 638 RIGRLNILEYLPGES---------NRDGVGRS-----SRHQSKDRMRSKSPERDMDVYK- 504
              R    +    +S         N DG G+S     SRH+SK + RS+SPER ++  + 
Sbjct: 256 SRSRSRSADKRRSKSKDQAEEKVQNSDGAGKSKSRSPSRHKSKSKSRSRSPERRVEEKRA 315

Query: 503 --SKNNHEMGSRSRDKELRRSR 444
             S++  +  SRS+++ + RSR
Sbjct: 316 SVSRSRSKEKSRSQEQGVHRSR 337


>ref|XP_004741035.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform X1
           [Mustela putorius furo] gi|511928452|ref|XP_004783298.1|
           PREDICTED: serine/arginine-rich splicing factor 4
           isoform X2 [Mustela putorius furo]
          Length = 502

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
 Frame = -3

Query: 818 RERQSKYGDSVMHGDQRRDSHRYSEREVNGKHRRSKSPSRTRTDKEVRRNGSKSPGKEVD 639
           R R S+   S   G  +    +   R  +G H RSKS SR+++    ++  S+SP K+  
Sbjct: 197 RSRHSRKSRS-RSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRSRSKKEKSRSPSKDDK 255

Query: 638 RIGRLNILEYLPGES---------NRDGVGRS-----SRHQSKDRMRSKSPERDMDVYK- 504
              R    +    +S         N DG G+S     SRH+SK + RS+SPER ++  + 
Sbjct: 256 SRSRSRSADKRRSKSKDQAEEKVQNSDGAGKSKSRSPSRHKSKSKSRSRSPERRVEEKRA 315

Query: 503 --SKNNHEMGSRSRDKELRRSR 444
             S++  +  SRS+++ + RSR
Sbjct: 316 SVSRSRSKEKSRSQEQGVHRSR 337


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