BLASTX nr result
ID: Ephedra26_contig00007361
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00007361
(502 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADG27843.1| U2 small nuclear ribonucleoprotein A [Gossypium h... 187 1e-45
ref|XP_006844771.1| hypothetical protein AMTR_s00016p00258810 [A... 183 2e-44
ref|XP_006417540.1| hypothetical protein EUTSA_v10008494mg [Eutr... 182 3e-44
gb|EOX94114.1| U2 small nuclear ribonucleoprotein A [Theobroma c... 182 4e-44
ref|NP_172447.1| U2 small nuclear ribonucleoprotein A' [Arabidop... 181 1e-43
ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotei... 180 2e-43
gb|EXC32355.1| U2 small nuclear ribonucleoprotein A' [Morus nota... 179 3e-43
ref|XP_002466092.1| hypothetical protein SORBIDRAFT_01g001040 [S... 179 3e-43
ref|XP_004981025.1| PREDICTED: U2 small nuclear ribonucleoprotei... 179 3e-43
gb|EMJ25439.1| hypothetical protein PRUPE_ppa018334mg, partial [... 179 3e-43
ref|XP_002892521.1| U2 small nuclear ribonucleoprotein A [Arabid... 179 3e-43
ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putati... 179 3e-43
ref|XP_002303732.1| predicted protein [Populus trichocarpa] gi|5... 179 3e-43
ref|XP_006487666.1| PREDICTED: U2 small nuclear ribonucleoprotei... 179 4e-43
ref|XP_006423874.1| hypothetical protein CICLE_v10028992mg [Citr... 179 4e-43
ref|XP_006423873.1| hypothetical protein CICLE_v10028992mg [Citr... 179 4e-43
ref|XP_004489191.1| PREDICTED: U2 small nuclear ribonucleoprotei... 179 4e-43
ref|XP_006306229.1| hypothetical protein CARUB_v10012046mg [Caps... 178 6e-43
tpg|DAA52522.1| TPA: U2 small nuclear ribonucleoprotein A [Zea m... 178 8e-43
gb|ACG39955.1| U2 small nuclear ribonucleoprotein A [Zea mays] 178 8e-43
>gb|ADG27843.1| U2 small nuclear ribonucleoprotein A [Gossypium hirsutum]
Length = 285
Score = 187 bits (476), Expect = 1e-45
Identities = 94/130 (72%), Positives = 106/130 (81%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MVK+TADLI+KCP +FN ++ERELDLRGNKIAVIENLGATEDQFD IDLSDNEIVKL+NF
Sbjct: 1 MVKLTADLIWKCPHFFNALKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLDNF 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYLKRL TLL GEFLP LHTL+LTNNRLVNL ++D LS+LP L+ LSL
Sbjct: 61 PYLKRLGTLLINNNRVTRINPNIGEFLPNLHTLVLTNNRLVNLVEIDPLSSLPKLQFLSL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNNITKKPN 130
>ref|XP_006844771.1| hypothetical protein AMTR_s00016p00258810 [Amborella trichopoda]
gi|548847242|gb|ERN06446.1| hypothetical protein
AMTR_s00016p00258810 [Amborella trichopoda]
Length = 300
Score = 183 bits (464), Expect = 2e-44
Identities = 93/130 (71%), Positives = 103/130 (79%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MV++TADLI+KCP +FN + +RELDLRGNKIAVIENLGATEDQFD IDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKCPHFFNAVGDRELDLRGNKIAVIENLGATEDQFDSIDLSDNEIVKLENF 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYL RL TL G +LPKLHTLILTNNRLVNL DLD L++LP L+ LSL
Sbjct: 61 PYLSRLGTLFINNNRITRININLGAYLPKLHTLILTNNRLVNLVDLDPLASLPKLQNLSL 120
Query: 471 LDNLVTKKTN 500
LDN VTKK N
Sbjct: 121 LDNNVTKKPN 130
>ref|XP_006417540.1| hypothetical protein EUTSA_v10008494mg [Eutrema salsugineum]
gi|557095311|gb|ESQ35893.1| hypothetical protein
EUTSA_v10008494mg [Eutrema salsugineum]
Length = 264
Score = 182 bits (463), Expect = 3e-44
Identities = 92/130 (70%), Positives = 105/130 (80%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MVK+TADLI+K P +FN I+ERELDLRGNKI VIENLGATEDQFD IDLSDNEIVKLENF
Sbjct: 1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDSIDLSDNEIVKLENF 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYLKRL TL+ GEFLPKLH+L+LTNNRLVNL ++D LS++P L+ LSL
Sbjct: 61 PYLKRLGTLIINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIDPLSSIPKLQYLSL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNNITKKPN 130
>gb|EOX94114.1| U2 small nuclear ribonucleoprotein A [Theobroma cacao]
Length = 286
Score = 182 bits (462), Expect = 4e-44
Identities = 92/130 (70%), Positives = 104/130 (80%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MVK+TADLI+K P +FN ++ERELDLRGNKIAV+ENLGATEDQFD IDLSDNEIVKL+NF
Sbjct: 1 MVKLTADLIWKSPHFFNALKERELDLRGNKIAVMENLGATEDQFDTIDLSDNEIVKLDNF 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYL RL TLL GEFLPKLHTL+LTNNRLVNL ++D LS+LP L LSL
Sbjct: 61 PYLNRLGTLLINNNRVTRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLSSLPKLEFLSL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNNITKKPN 130
>ref|NP_172447.1| U2 small nuclear ribonucleoprotein A' [Arabidopsis thaliana]
gi|19884091|sp|P43333.2|RU2A_ARATH RecName: Full=U2
small nuclear ribonucleoprotein A'; Short=U2 snRNP A'
gi|2160183|gb|AAB60746.1| Identical to A. thaliana U2
SnRNP-specific A' protein (gb|X69137). ESTs gb|ATTS0705,
gb|ATTS0339 come from this gene [Arabidopsis thaliana]
gi|16649065|gb|AAL24384.1| SnRNP-specific A protein
[Arabidopsis thaliana] gi|23197870|gb|AAN15462.1|
SnRNP-specific A protein [Arabidopsis thaliana]
gi|332190368|gb|AEE28489.1| U2 small nuclear
ribonucleoprotein A' [Arabidopsis thaliana]
Length = 249
Score = 181 bits (458), Expect = 1e-43
Identities = 91/130 (70%), Positives = 104/130 (80%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MVK+TADLI+K P +FN I+ERELDLRGNKI VIENLGATEDQFD IDLSDNEIVKLENF
Sbjct: 1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYL RL TLL GEFLPKLH+L+LTNNRLVNL ++D L+++P L+ LSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIDPLASIPKLQYLSL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNNITKKAN 130
>ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotein A' [Vitis vinifera]
gi|296085571|emb|CBI29303.3| unnamed protein product
[Vitis vinifera]
Length = 287
Score = 180 bits (457), Expect = 2e-43
Identities = 91/130 (70%), Positives = 103/130 (79%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MV++TADLI+K P +FN IRERELDLRGNK+AVIENLGATEDQFD IDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIRERELDLRGNKVAVIENLGATEDQFDTIDLSDNEIVKLENL 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYL RL TLL GE+LPKLHTL+LTNNRLVNL ++D LS+ P L+ LSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSFPKLQFLSL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNNITKKPN 130
>gb|EXC32355.1| U2 small nuclear ribonucleoprotein A' [Morus notabilis]
Length = 315
Score = 179 bits (455), Expect = 3e-43
Identities = 91/130 (70%), Positives = 104/130 (80%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MV++TADLI+K P +FN I+ERELDLRGNKIAVIENLGATEDQFD IDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENL 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYL RL TLL GEFLPKLH+L+LTNNRLVNL ++D L++LP L+ LSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNIGEFLPKLHSLVLTNNRLVNLAEIDPLASLPKLQFLSL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNNITKKPN 130
>ref|XP_002466092.1| hypothetical protein SORBIDRAFT_01g001040 [Sorghum bicolor]
gi|241919946|gb|EER93090.1| hypothetical protein
SORBIDRAFT_01g001040 [Sorghum bicolor]
Length = 283
Score = 179 bits (455), Expect = 3e-43
Identities = 91/128 (71%), Positives = 103/128 (80%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MV++TADLI+K P +FN I+ERELDLRGNKIAVIENLGATEDQFD IDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYL RL TLL GEFLPKLHTL+LTNNRL NL ++D L++LP L+ LSL
Sbjct: 61 PYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQFLSL 120
Query: 471 LDNLVTKK 494
LDN VTK+
Sbjct: 121 LDNTVTKQ 128
>ref|XP_004981025.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Setaria
italica]
Length = 282
Score = 179 bits (454), Expect = 3e-43
Identities = 90/128 (70%), Positives = 104/128 (81%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MV++TADLI+K P +FN I+ERELDLRGNKIAVIENLGATEDQFD IDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PY+ RL TLL GEFLPKLHTL+LTNNRL NL ++D L++LP+L+ LSL
Sbjct: 61 PYMNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPNLQYLSL 120
Query: 471 LDNLVTKK 494
LDN VTK+
Sbjct: 121 LDNTVTKQ 128
>gb|EMJ25439.1| hypothetical protein PRUPE_ppa018334mg, partial [Prunus persica]
Length = 285
Score = 179 bits (454), Expect = 3e-43
Identities = 90/130 (69%), Positives = 103/130 (79%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MV++TADL++K P +FN ++ERELDLRGNKIAVIENLGATEDQFD IDLSDNEIVKLEN
Sbjct: 1 MVRLTADLVWKSPHFFNALKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENL 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYL RL TL+ GEFLPKLHTLILTNNRLVNL ++D L +LP L+ LSL
Sbjct: 61 PYLNRLGTLIINNNRITRINPNIGEFLPKLHTLILTNNRLVNLVEIDPLESLPKLQFLSL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNNITKKPN 130
>ref|XP_002892521.1| U2 small nuclear ribonucleoprotein A [Arabidopsis lyrata subsp.
lyrata] gi|297338363|gb|EFH68780.1| U2 small nuclear
ribonucleoprotein A [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 179 bits (454), Expect = 3e-43
Identities = 90/130 (69%), Positives = 104/130 (80%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MVK+TADLI+K P +FN I+ERELDLRGNKI VIENLGATEDQFD IDLSDNEIVKLENF
Sbjct: 1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYL RL TLL GEFLPKLH+L+LTNNRLVNL ++D L+++P L+ L+L
Sbjct: 61 PYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIDPLASIPKLQYLTL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNNITKKPN 130
>ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putative [Ricinus communis]
gi|223548673|gb|EEF50164.1| U2 small nuclear
ribonucleoprotein A, putative [Ricinus communis]
Length = 287
Score = 179 bits (454), Expect = 3e-43
Identities = 91/130 (70%), Positives = 103/130 (79%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MV++TADLI+K P +FN I+ERELDLRGNKI VIENLGATEDQFD IDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYL RL TLL GEFLPKLHTL+LTNNRLVNL ++D L++LP L+ LSL
Sbjct: 61 PYLTRLGTLLINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLASLPKLQFLSL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNSITKKPN 130
>ref|XP_002303732.1| predicted protein [Populus trichocarpa]
gi|566256109|ref|XP_006388045.1| U2 small nuclear
ribonucleoprotein A' [Populus trichocarpa]
gi|550309315|gb|ERP46959.1| U2 small nuclear
ribonucleoprotein A' [Populus trichocarpa]
Length = 284
Score = 179 bits (454), Expect = 3e-43
Identities = 90/130 (69%), Positives = 103/130 (79%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MV++TADLI+K P +FN I+ERELDLRGNKI VIENLGATEDQFD IDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYL RL TL+ GE+LPKLHTL+LTNNRLVNL ++D LS+LP L+ LSL
Sbjct: 61 PYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSLPKLQFLSL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNTITKKPN 130
>ref|XP_006487666.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Citrus
sinensis]
Length = 286
Score = 179 bits (453), Expect = 4e-43
Identities = 90/130 (69%), Positives = 104/130 (80%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MV++TADLI+K P +FN I+ERELDLRGNKIAVIENLGATEDQFD IDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
P+L RL TL+ GEFLPKLHTL+LTNNRLVNL ++D L++LP L+ LSL
Sbjct: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNSITKKPN 130
>ref|XP_006423874.1| hypothetical protein CICLE_v10028992mg [Citrus clementina]
gi|557525808|gb|ESR37114.1| hypothetical protein
CICLE_v10028992mg [Citrus clementina]
Length = 286
Score = 179 bits (453), Expect = 4e-43
Identities = 90/130 (69%), Positives = 104/130 (80%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MV++TADLI+K P +FN I+ERELDLRGNKIAVIENLGATEDQFD IDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
P+L RL TL+ GEFLPKLHTL+LTNNRLVNL ++D L++LP L+ LSL
Sbjct: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNSITKKPN 130
>ref|XP_006423873.1| hypothetical protein CICLE_v10028992mg [Citrus clementina]
gi|557525807|gb|ESR37113.1| hypothetical protein
CICLE_v10028992mg [Citrus clementina]
Length = 282
Score = 179 bits (453), Expect = 4e-43
Identities = 90/130 (69%), Positives = 104/130 (80%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MV++TADLI+K P +FN I+ERELDLRGNKIAVIENLGATEDQFD IDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENM 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
P+L RL TL+ GEFLPKLHTL+LTNNRLVNL ++D L++LP L+ LSL
Sbjct: 61 PHLNRLGTLIINNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLTSLPKLQFLSL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNSITKKPN 130
>ref|XP_004489191.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like isoform X1
[Cicer arietinum]
Length = 280
Score = 179 bits (453), Expect = 4e-43
Identities = 89/130 (68%), Positives = 104/130 (80%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MV++TADLI+K P +FN I+ERELDLRGNKI+VIEN+GATEDQFD IDLSDNEIVKLEN
Sbjct: 1 MVRLTADLIWKSPHFFNAIKERELDLRGNKISVIENIGATEDQFDTIDLSDNEIVKLENL 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYL RL TLL GEFLPKLHTL+LTNNR+VNL ++D L++LP L+ LSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNIGEFLPKLHTLVLTNNRIVNLVEIDPLASLPKLQFLSL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNNITKKVN 130
>ref|XP_006306229.1| hypothetical protein CARUB_v10012046mg [Capsella rubella]
gi|482574940|gb|EOA39127.1| hypothetical protein
CARUB_v10012046mg [Capsella rubella]
Length = 263
Score = 178 bits (452), Expect = 6e-43
Identities = 89/130 (68%), Positives = 104/130 (80%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MVK+TADLI+K P +FN I+ERELDLRGNKI VIENLGATEDQFD IDLSDNEIVKL+NF
Sbjct: 1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLDNF 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYL RL TLL GEFLPKLH+L++TNNRLVNL ++D L+++P L+ LSL
Sbjct: 61 PYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVITNNRLVNLVEIDPLASIPKLQYLSL 120
Query: 471 LDNLVTKKTN 500
LDN +TKK N
Sbjct: 121 LDNNITKKPN 130
>tpg|DAA52522.1| TPA: U2 small nuclear ribonucleoprotein A [Zea mays]
Length = 284
Score = 178 bits (451), Expect = 8e-43
Identities = 89/128 (69%), Positives = 103/128 (80%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MV++TADLI+K P +FN ++ERELDLRGNKIAVIEN+GATEDQFD IDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKSPHFFNAVKERELDLRGNKIAVIENVGATEDQFDTIDLSDNEIVKLENF 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYL RL TLL GEFLPKLHTL+LTNNRL NL ++D L++LP L+ LSL
Sbjct: 61 PYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQFLSL 120
Query: 471 LDNLVTKK 494
LDN VTK+
Sbjct: 121 LDNTVTKQ 128
>gb|ACG39955.1| U2 small nuclear ribonucleoprotein A [Zea mays]
Length = 286
Score = 178 bits (451), Expect = 8e-43
Identities = 89/128 (69%), Positives = 103/128 (80%)
Frame = +3
Query: 111 MVKITADLIYKCPQYFNPIRERELDLRGNKIAVIENLGATEDQFDCIDLSDNEIVKLENF 290
MV++TADLI+K P +FN ++ERELDLRGNKIAVIEN+GATEDQFD IDLSDNEIVKLENF
Sbjct: 1 MVRLTADLIWKSPHFFNAVKERELDLRGNKIAVIENVGATEDQFDTIDLSDNEIVKLENF 60
Query: 291 PYLKRLTTLLXXXXXXXXXXXXXGEFLPKLHTLILTNNRLVNLTDLDSLSALPSLRTLSL 470
PYL RL TLL GEFLPKLHTL+LTNNRL NL ++D L++LP L+ LSL
Sbjct: 61 PYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQFLSL 120
Query: 471 LDNLVTKK 494
LDN VTK+
Sbjct: 121 LDNTVTKQ 128