BLASTX nr result

ID: Ephedra26_contig00007245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00007245
         (464 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001765725.1| predicted protein [Physcomitrella patens] gi...   105   5e-21
ref|XP_004350354.1| DNA-dependent protein kinase subunit [Dictyo...    56   4e-06

>ref|XP_001765725.1| predicted protein [Physcomitrella patens] gi|162683151|gb|EDQ69564.1|
            predicted protein [Physcomitrella patens]
          Length = 4165

 Score =  105 bits (263), Expect = 5e-21
 Identities = 56/144 (38%), Positives = 87/144 (60%), Gaps = 2/144 (1%)
 Frame = -1

Query: 440  LTRLFNVWHKRWPSPQFDDVEAWDDVLQNRLLYFEKTQQLVGRQLLKE--DGDFDKQRVV 267
            L+RL + WHKRWPSP FDDVEAWDD+ QNRLL+ +  Q+     + +   D  F      
Sbjct: 3179 LSRLLSGWHKRWPSPNFDDVEAWDDIAQNRLLFLKYIQEHFNNPVQRNSFDDKFCNSISS 3238

Query: 266  DLDFEKANIFYEAARGLILQGSYDASQGYMNQYMAAIEGSNKKEKLNFDFFNTLVKLRCL 87
             +D E+A++    A GL+  G+   +Q Y+N+YM++    + K +L+F  F  LV+L+CL
Sbjct: 3239 LIDAERAHLHVAVANGLMECGALPVAQSYINRYMSSKFEFSAKHRLDFRNFKALVRLQCL 3298

Query: 86   QADRESTIDAFEAVTMLQQVRDYV 15
            +A+R+ +  A   +  LQQ+  Y+
Sbjct: 3299 RAERDES--ANNRIKKLQQLLVYI 3320


>ref|XP_004350354.1| DNA-dependent protein kinase subunit [Dictyostelium fasciculatum]
            gi|328865264|gb|EGG13650.1| DNA-dependent protein kinase
            subunit [Dictyostelium fasciculatum]
          Length = 3111

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
 Frame = -1

Query: 452  NEASLTRLFNVWHKRWPSPQFDDVEAWDDVLQNRLLYFEKTQQLVGRQLLKEDGDFDKQR 273
            N   +  L N+W KR+PS + DDV  WDDV+  R +  EK  +   R +  ++ +  +  
Sbjct: 2161 NIKHMESLVNLWKKRYPS-RLDDVVVWDDVVSYRSVLLEKIYE---RFMSSQNDEHIESS 2216

Query: 272  VVDLDF-EKANIFYEAARGLILQGSYDASQGYMNQYMAAIEGSNKKEKLNFDFFNTLVKL 96
            + +L   E+A ++++ ++G    G+   S+ Y    + +     K+  L F   ++L+K+
Sbjct: 2217 IKNLLIQERAELYHQMSKGARKLGNIIVSESYFRLAVKSYP-KTKENDLAFPLVSSLIKI 2275

Query: 95   RCLQADREST 66
             CL+A   ST
Sbjct: 2276 YCLKAKNSST 2285


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