BLASTX nr result

ID: Ephedra26_contig00007118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00007118
         (1310 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001761999.1| predicted protein [Physcomitrella patens] gi...   187   6e-45
ref|XP_001751345.1| predicted protein [Physcomitrella patens] gi...   185   3e-44

>ref|XP_001761999.1| predicted protein [Physcomitrella patens] gi|162686716|gb|EDQ73103.1|
            predicted protein [Physcomitrella patens]
          Length = 970

 Score =  187 bits (476), Expect = 6e-45
 Identities = 103/262 (39%), Positives = 161/262 (61%), Gaps = 6/262 (2%)
 Frame = +3

Query: 93   PEEENSKKAIRRR-MLGNSFSVKVIAYLLGSLVDASTRTNKAEYVLPYKNIEEQECSVMA 269
            P  ++S K I R  +LGN+FSV+VIAYL   L+ A  R++  + V    +++E+E S M 
Sbjct: 644  PTRQDSLKDIDRWFLLGNTFSVQVIAYLTSPLLRAEVRSH-GKRVNIVGSVKEEELSAME 702

Query: 270  VGDLWALYNGRGLPNWYGVIVKRSGGRFTK-----SNKNGKNGSVQIEVKFLDFTYDYAV 434
             GD+WAL+N  G PNWY VI  R+G RF+        +N     ++IE+K+L+ T  Y  
Sbjct: 703  PGDVWALFNEYGRPNWYAVIESRTGDRFSAFPDATGKRNVTKLPLKIEMKYLEMTPAYLK 762

Query: 435  QEADDLCPEHGTGRYKICRDTEVQNSWFSVSHRMKNYYKTQNSYFVYPGKNEVWAINHRL 614
            +E D+  P+ G+G  K+    ++Q++W + SHR+ +Y K ++SYFVYPG +EVWA+ +  
Sbjct: 763  EEVDEWNPQRGSGLLKLRNVMDIQDNWQAFSHRVTSYVKLEDSYFVYPGNDEVWAVYN-- 820

Query: 615  RAKCAPFFVFVTESSFSIKKKQLETTRPGKEGFKASCYALQQTSQPEVYRITDKLVEFDS 794
                + +FV+V+ES  +I   +L   +PG+EGF A C  LQ+T++ E++  T  +VEF  
Sbjct: 821  GETLSRYFVYVSES--TISSDRLRRGKPGQEGFHARCLLLQKTAEHEIFLKTSTMVEFTD 878

Query: 795  LSNFAYSVPYIYKDQKGLLKIE 860
            L  F + VP+  K +  LLK+E
Sbjct: 879  LQPFCFRVPFYIKHEANLLKVE 900


>ref|XP_001751345.1| predicted protein [Physcomitrella patens] gi|162697326|gb|EDQ83662.1|
            predicted protein [Physcomitrella patens]
          Length = 812

 Score =  185 bits (470), Expect = 3e-44
 Identities = 109/283 (38%), Positives = 163/283 (57%), Gaps = 6/283 (2%)
 Frame = +3

Query: 81   EKLVPEEENSKKAIRRRMLGNSFSVKVIAYLLGSLVDASTRTNKAEYVLPYKNIEEQECS 260
            E+    +E+ K   R  +LGNSFSV+VI YL  SL+ +  R +  + V    ++ E+E S
Sbjct: 463  ERNPTRQESLKDLDRWFLLGNSFSVQVITYLTSSLLKSEVRFH-GKAVNIVGSVREEELS 521

Query: 261  VMAVGDLWALYNGRGLPNWYGVIVKRSGGRFTK-SNKNGKNG----SVQIEVKFLDFTYD 425
             M  GD+WAL+N  G PNWY VI  R+G RF++  +  GK       + IE+K+L+ T  
Sbjct: 522  AMEPGDVWALFNEHGRPNWYAVIQSRTGDRFSEIPDATGKRSITKLPLSIEMKYLEMTPA 581

Query: 426  YAVQEADDLCPEHGTGRYKICRDTEVQNSWFSVSHRMKNYYKTQNSYFVYPGKNEVWAIN 605
            YA  E D+  P+ G+G  K+    ++Q++W + SHR+ +Y K +NSYFVYPG +EVWA+ 
Sbjct: 582  YAKDEVDEWNPQRGSGLLKLRDVVDIQDNWQAFSHRVTSYVKFENSYFVYPGNDEVWAVY 641

Query: 606  HRLRAKCAPFFVFVTESSFSIKKKQLETTRPGK-EGFKASCYALQQTSQPEVYRITDKLV 782
            H      + +FV+V ES  +I   +L   +PG+ EGF A C  LQ+T++ EVY  T K V
Sbjct: 642  H--AETLSRYFVYVVES--TIICARLLNDKPGQDEGFLARCLLLQKTTEHEVYLKTSKEV 697

Query: 783  EFDSLSNFAYSVPYIYKDQKGLLKIEYCSNRENSFAEGQGERT 911
            E   +  F + VP+  K++  LLK+E    +     +   E T
Sbjct: 698  ELSDIQPFCFRVPFHIKNEANLLKVEVSGVKSRQSMKADRETT 740


Top