BLASTX nr result

ID: Ephedra26_contig00007028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00007028
         (557 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006281156.1| hypothetical protein CARUB_v10027190mg, part...    63   5e-08
ref|NP_568647.1| ribosomal protein L35 [Arabidopsis thaliana] gi...    63   5e-08
ref|XP_002863467.1| structural constituent of ribosome [Arabidop...    63   5e-08
ref|XP_006398238.1| hypothetical protein EUTSA_v10001052mg [Eutr...    62   1e-07
ref|XP_004300166.1| PREDICTED: uncharacterized protein LOC101309...    56   7e-06

>ref|XP_006281156.1| hypothetical protein CARUB_v10027190mg, partial [Capsella rubella]
           gi|482549860|gb|EOA14054.1| hypothetical protein
           CARUB_v10027190mg, partial [Capsella rubella]
          Length = 190

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/55 (56%), Positives = 34/55 (61%)
 Frame = -2

Query: 505 SFKDRFVPLPDGTIMRWQAGKRHNAXXXXXXXXXXXXXXKIVRPAYAKMMKKLGF 341
           SFKDRF PL DGTI RW+ GKRHNA               +V PAYAK+MKKL F
Sbjct: 134 SFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNF 188


>ref|NP_568647.1| ribosomal protein L35 [Arabidopsis thaliana]
           gi|21593524|gb|AAM65491.1| unknown [Arabidopsis
           thaliana] gi|26450411|dbj|BAC42320.1| unknown protein
           [Arabidopsis thaliana] gi|28827502|gb|AAO50595.1|
           unknown protein [Arabidopsis thaliana]
           gi|332007889|gb|AED95272.1| ribosomal protein L35
           [Arabidopsis thaliana]
          Length = 173

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/55 (56%), Positives = 34/55 (61%)
 Frame = -2

Query: 505 SFKDRFVPLPDGTIMRWQAGKRHNAXXXXXXXXXXXXXXKIVRPAYAKMMKKLGF 341
           SFKDRF PL DGTI RW+ GKRHNA               +V PAYAK+MKKL F
Sbjct: 117 SFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNF 171


>ref|XP_002863467.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata] gi|297309302|gb|EFH39726.1| structural
           constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata]
          Length = 170

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/55 (56%), Positives = 34/55 (61%)
 Frame = -2

Query: 505 SFKDRFVPLPDGTIMRWQAGKRHNAXXXXXXXXXXXXXXKIVRPAYAKMMKKLGF 341
           SFKDRF PL DGTI RW+ GKRHNA               +V PAYAK+MKKL F
Sbjct: 114 SFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNF 168


>ref|XP_006398238.1| hypothetical protein EUTSA_v10001052mg [Eutrema salsugineum]
           gi|557099327|gb|ESQ39691.1| hypothetical protein
           EUTSA_v10001052mg [Eutrema salsugineum]
          Length = 173

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/55 (54%), Positives = 34/55 (61%)
 Frame = -2

Query: 505 SFKDRFVPLPDGTIMRWQAGKRHNAXXXXXXXXXXXXXXKIVRPAYAKMMKKLGF 341
           S+KDRF PL DGTI RW+ GKRHNA               +V PAYAK+MKKL F
Sbjct: 117 SYKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNF 171


>ref|XP_004300166.1| PREDICTED: uncharacterized protein LOC101309736 isoform 1 [Fragaria
           vesca subsp. vesca]
          Length = 160

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 28/55 (50%), Positives = 32/55 (58%)
 Frame = -2

Query: 505 SFKDRFVPLPDGTIMRWQAGKRHNAXXXXXXXXXXXXXXKIVRPAYAKMMKKLGF 341
           S+K RF  L DGTI RW+ GKRHNA               +V PAYA +MKKLGF
Sbjct: 104 SYKSRFRLLNDGTIRRWREGKRHNAHLKSKISKRRLRLPALVHPAYATVMKKLGF 158


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